#hg19.snp135.chrom	hg19.snp135.chromStart	hg19.snp135.chromEnd	hg19.snp135.name	hg19.snp135.score	hg19.snp135.strand	hg19.snp135.refNCBI	hg19.snp135.refUCSC	hg19.snp135.observed	hg19.snp135.molType	hg19.snp135.class	hg19.snp135.valid	hg19.snp135.avHet	hg19.snp135.avHetSE	hg19.snp135.func	hg19.snp135.locType	hg19.snp135.weight	hg19.snp135.exceptions	hg19.snp135.submitterCount	hg19.snp135.submitters	hg19.snp135.alleleFreqCount	hg19.snp135.alleles	hg19.snp135.alleleNs	hg19.snp135.alleleFreqs	hg19.snp135.bitfields	http://genome.ucsc.edu/goldenPath/help/examples/bigWigExample.bw.chrom	http://genome.ucsc.edu/goldenPath/help/examples/bigWigExample.bw.chromStart	http://genome.ucsc.edu/goldenPath/help/examples/bigWigExample.bw.chromEnd	http://genome.ucsc.edu/goldenPath/help/examples/bigWigExample.bw.valueAverage
chr21	34716855	34716856	rs7281992	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.0275	0.113989	intron	exact	1		5	1000GENOMES,BCM_SSAHASNP,BUSHMAN,ILLUMINA-UK,PGA-UW-FHCRC,	2	C,T,	2672.000000,18.000000,	0.993309,0.006691,	maf-5-some-pop	chr21	34716855	34716856	40.000000
chr21	34716949	34716950	rs2843989	0	+	T	T	A/T	genomic	single	unknown	0	0	intron	exact	1		1	SC_JCM,	0					chr21	34716949	34716950	20.000000
chr21	34716950	34716951	rs2856971	0	+	A	A	A/T	genomic	single	unknown	0	0	intron	exact	1		1	SC_JCM,	0					chr21	34716950	34716951	40.000000
chr21	34717025	34717026	rs185479896	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717025	34717026	40.000000
chr21	34717070	34717071	rs80084584	0	+	C	C	C/T	genomic	single	unknown	0	0	intron	exact	1	SingleAlleleFreq	1	ENSEMBL,	1	T,	2.000000,	1.000000,		chr21	34717070	34717071	20.000000
chr21	34717071	34717072	rs67355483	0	+	T	T	-/TTAT	genomic	in-del	unknown	0	0	intron	exact	1	ObservedMismatch	1	DEVINE_LAB,	0					chr21	34717071	34717072	20.000000
chr21	34717071	34717071	rs11421099	0	+	-	-	-/T/TTAT	genomic	mixed	by-cluster	0.5	0	intron	between	1	InconsistentAlleles	2	DEVINE_LAB,HUMANGENOME_JCVI,	2	-,TTAT,	1.000000,1.000000,	0.500000,0.500000,					
chr21	34717071	34717071	rs143485157	0	+	CT	CT	-/TTATTTACTTATTTAT	genomic	in-del	by-1000genomes	0	0	intron	between	1	ObservedMismatch	1	1000GENOMES,	0								
chr21	34717076	34717076	rs71806347	0	+	-	-	-/TTACTTAT	genomic	insertion	unknown	0	0	intron	between	1		1	DEVINE_LAB,	0								
chr21	34717078	34717079	rs28513622	0	+	T	T	C/T	genomic	single	by-cluster	0.5	0	intron	exact	1		2	COMPLETE_GENOMICS,SSAHASNP,	2	C,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34717078	34717079	0.000000
chr21	34717089	34717089	rs71723772	0	+	-	-	-/TATTTATG	genomic	insertion	unknown	0	0	intron	between	1		1	DEVINE_LAB,	0								
chr21	34717099	34717099	rs71901864	0	+	-	-	-/TTTA	genomic	insertion	unknown	0	0	intron	between	1		1	DEVINE_LAB,	0								
chr21	34717108	34717109	rs60757412	0	+	T	T	-/ATTT	genomic	in-del	unknown	0	0	intron	exact	1	ObservedMismatch	1	HGSV,	0					chr21	34717108	34717109	0.000000
chr21	34717109	34717109	rs71194836	0	+	-	-	-/ATTT	genomic	insertion	unknown	0	0	intron	between	1	SingleAlleleFreq	1	HUMANGENOME_JCVI,	1	ATTT,	2.000000,	1.000000,					
chr21	34717228	34717229	rs7282848	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.002738	0.036902	intron	exact	1		2	1000GENOMES,BCM_SSAHASNP,	2	A,G,	6.000000,4370.000000,	0.001371,0.998629,		chr21	34717228	34717229	60.000000
chr21	34717308	34717309	rs112453727	0	+	G	G	A/G	genomic	single	unknown	0.5	0	intron	exact	1		1	BUSHMAN,	2	A,G,	1.000000,1.000000,	0.500000,0.500000,		chr21	34717308	34717309	80.000000
chr21	34717317	34717318	rs182531740	0	+	T	T	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717317	34717318	60.000000
chr21	34717318	34717319	rs186353859	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717318	34717319	60.000000
chr21	34717389	34717390	rs113093877	0	+	G	G	A/G	genomic	single	unknown	0.5	0	intron	exact	1		1	BUSHMAN,	2	A,G,	1.000000,1.000000,	0.500000,0.500000,		chr21	34717389	34717390	100.000000
chr21	34717394	34717395	rs147448931	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717394	34717395	80.000000
chr21	34717410	34717411	rs139423725	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717410	34717411	60.000000
chr21	34717502	34717503	rs187965787	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717502	34717503	60.000000
chr21	34717530	34717531	rs180872415	0	+	T	T	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717530	34717531	20.000000
chr21	34717605	34717606	rs150050372	0	+	A	A	A/C	cDNA	single	by-cluster,by-frequency,by-1000genomes	0.003959	0.044313	missense	exact	1		2	1000GENOMES,NHLBI-ESP,	2	A,C,	4529.000000,9.000000,	0.998017,0.001983,		chr21	34717605	34717606	20.000000
chr21	34717619	34717619	rs35049505	0	+	-	-	-/G	genomic	insertion	unknown	0	0	frameshift	between	1		1	ABI,	0								
chr21	34717625	34717626	rs35045888	0	+	T	T	A/T	genomic	single	unknown	0	0	missense	exact	1		1	ABI,	0					chr21	34717625	34717626	20.000000
chr21	34717627	34717628	rs34849215	0	+	T	T	A/T	genomic	single	unknown	0	0	nonsense	exact	1		1	ABI,	0					chr21	34717627	34717628	20.000000
chr21	34717684	34717685	rs185424733	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717684	34717685	0.000000
chr21	34717725	34717726	rs17875880	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.016042	0.088111	intron	exact	1		3	1000GENOMES,ILLUMINA,PGA-UW-FHCRC,	2	C,T,	2893.000000,37.000000,	0.987372,0.012628,	maf-5-some-pop	chr21	34717725	34717726	60.000000
chr21	34717895	34717896	rs149190130	0	+	A	A	A/C	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34717895	34717896	20.000000
chr21	34718019	34718020	rs143297277	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718019	34718020	20.000000
chr21	34718032	34718033	rs115308469	0	+	A	A	A/G	genomic	single	by-frequency,by-1000genomes	0.081155	0.184367	intron	exact	1		1	1000GENOMES,	2	A,G,	2288.000000,18.000000,	0.992194,0.007806,		chr21	34718032	34718033	60.000000
chr21	34718130	34718131	rs146690278	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718130	34718131	20.000000
chr21	34718203	34718204	rs17875821	0	+	A	A	A/G	genomic	single	by-cluster,by-1000genomes	0.024093	0.107079	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,G,	81.000000,1.000000,	0.987805,0.012195,		chr21	34718203	34718204	20.000000
chr21	34718313	34718314	rs35938061	0	+	C	C	C/T	genomic	single	unknown	0	0	intron	exact	1		1	RIKENSNPRC,	0					chr21	34718313	34718314	80.000000
chr21	34718358	34718359	rs115956014	0	+	C	C	C/T	genomic	single	by-frequency,by-1000genomes	0.033324	0.124705	intron	exact	1		1	1000GENOMES,	2	C,T,	2292.000000,14.000000,	0.993929,0.006071,		chr21	34718358	34718359	80.000000
chr21	34718359	34718360	rs17875822	0	+	G	G	A/G	genomic	single	unknown	0.023526	0.105875	intron	exact	1		1	PGA-UW-FHCRC,	2	A,G,	1.000000,83.000000,	0.011905,0.988095,		chr21	34718359	34718360	80.000000
chr21	34718399	34718400	rs12626234	0	+	C	C	C/G	genomic	single	by-cluster,by-frequency,by-hapmap	0.013422	0.080814	intron	exact	1		2	CSHL-HAPMAP,ENSEMBL,	2	C,G,	294.000000,2.000000,	0.993243,0.006757,		chr21	34718399	34718400	40.000000
chr21	34718409	34718410	rs13046501	0	+	A	A	A/G	genomic	single	unknown	0	0	intron	exact	1		1	SSAHASNP,	0					chr21	34718409	34718410	0.000000
chr21	34718428	34718429	rs17875881	0	+	A	A	A/G	genomic	single	by-cluster,by-1000genomes	0.021975	0.102493	intron	exact	1		3	1000GENOMES,ILLUMINA,PGA-UW-FHCRC,	2	A,G,	2240.000000,38.000000,	0.983319,0.016681,		chr21	34718428	34718429	20.000000
chr21	34718492	34718493	rs183331962	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718492	34718493	40.000000
chr21	34718510	34718511	rs17875882	0	+	A	A	A/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.042533	0.13949	intron	exact	1		3	1000GENOMES,ILLUMINA,PGA-UW-FHCRC,	2	A,T,	2275.000000,5.000000,	0.997807,0.002193,		chr21	34718510	34718511	40.000000
chr21	34718564	34718565	rs187102960	0	+	G	G	G/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718564	34718565	80.000000
chr21	34718673	34718674	rs191658383	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718673	34718674	80.000000
chr21	34718744	34718745	rs145266576	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718744	34718745	0.000000
chr21	34718906	34718907	rs183945526	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718906	34718907	60.000000
chr21	34718914	34718915	rs79347769	0	+	C	C	A/C	genomic	single	by-frequency,by-1000genomes	0.032778	0.123752	intron	exact	1		1	1000GENOMES,	2	A,C,	23.000000,2285.000000,	0.009965,0.990035,		chr21	34718914	34718915	40.000000
chr21	34718919	34718920	rs187918590	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34718919	34718920	20.000000
chr21	34719019	34719020	rs191275052	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34719019	34719020	40.000000
chr21	34719066	34719067	rs137868943	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34719066	34719067	20.000000
chr21	34719200	34719201	rs140891889	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34719200	34719201	0.000000
chr21	34719272	34719273	rs182453300	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34719272	34719273	80.000000
chr21	34719437	34719438	rs5843597	0	+	T	T	-/T	genomic	deletion	unknown	0.5	0	intron	exact	1		3	BUSHMAN,DEVINE_LAB,PJP,	2	-,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34719437	34719438	40.000000
chr21	34719437	34719438	rs143432335	0	+	T	T	-/T	genomic	deletion	unknown	0	0	intron	exact	1		1	BL,	0					chr21	34719437	34719438	40.000000
chr21	34719442	34719443	rs11318007	0	+	T	T	-/T	genomic	deletion	unknown	0	0	intron	exact	1		1	DEVINE_LAB,	0					chr21	34719442	34719443	0.000000
chr21	34719443	34719444	rs72094085	0	+	T	T	-/T	genomic	deletion	unknown	0	0	intron	exact	1		1	DEVINE_LAB,	0					chr21	34719443	34719444	0.000000
chr21	34719445	34719446	rs5843598	0	+	T	T	-/T	genomic	deletion	unknown	0	0	intron	exact	1		1	DEVINE_LAB,	0					chr21	34719445	34719446	0.000000
chr21	34719447	34719448	rs11335843	0	+	T	T	-/T	genomic	deletion	unknown	0	0	intron	exact	1		1	DEVINE_LAB,	0					chr21	34719447	34719448	0.000000
chr21	34719448	34719449	rs34067309	0	+	T	T	-/T	genomic	deletion	unknown	0	0	intron	exact	1		1	DEVINE_LAB,	0					chr21	34719448	34719449	0.000000
chr21	34719451	34719452	rs77843613	0	+	T	T	G/T	genomic	single	unknown	0	0	intron	exact	1	SingleAlleleFreq	1	ENSEMBL,	1	G,	2.000000,	1.000000,		chr21	34719451	34719452	20.000000
chr21	34719451	34719453	rs80191435	0	+	TT	TT	-/TT	genomic	deletion	unknown	0	0	intron	range	1		1	BCMHGSC_JDW,	0					chr21	34719451	34719453	20.000000
chr21	34719452	34719453	rs71194837	0	+	T	T	-/T	genomic	deletion	by-cluster	0	0	intron	exact	1	SingleAlleleFreq	2	HUMANGENOME_JCVI,PJP,	1	-,	2.000000,	1.000000,		chr21	34719452	34719453	20.000000
chr21	34719453	34719454	rs76484569	0	+	G	G	G/T	genomic	single	unknown	0.5	0	intron	exact	1		1	ENSEMBL,	2	G,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34719453	34719454	20.000000
chr21	34719519	34719520	rs4817561	0	+	C	C	C/T	genomic	single	by-cluster,by-1000genomes	0	0	intron	exact	1		2	1000GENOMES,WI_SSAHASNP,	2	C,T,	2149.000000,43.000000,	0.980383,0.019617,		chr21	34719519	34719520	60.000000
chr21	34719521	34719522	rs138605635	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34719521	34719522	80.000000
chr21	34719654	34719655	rs17875823	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.182022	0.240581	intron	exact	1		3	1000GENOMES,BUSHMAN,PGA-UW-FHCRC,	2	C,T,	2155.000000,112.000000,	0.950595,0.049404,	maf-5-some-pop,maf-5-all-pops	chr21	34719654	34719655	60.000000
chr21	34719727	34719728	rs13046940	0	+	G	G	A/G	genomic	single	by-frequency,by-1000genomes	0.5	0	intron	exact	1		4	1000GENOMES,ABI,ENSEMBL,SSAHASNP,	2	A,G,	48.000000,2144.000000,	0.021898,0.978102,		chr21	34719727	34719728	80.000000
chr21	34719734	34719735	rs11700514	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-hapmap,by-1000genomes	0.251791	0.249994	intron	exact	1		8	1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,KRIBB_YJKIM,PGA-UW-FHCRC,	2	C,T,	3455.000000,615.000000,	0.848894,0.151106,	maf-5-some-pop	chr21	34719734	34719735	80.000000
chr21	34719994	34719995	rs187143793	0	+	T	T	G/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34719994	34719995	0.000000
chr21	34720079	34720080	rs17875825	0	+	C	C	C/T	genomic	single	unknown	0.022469	0.103584	intron	exact	1		1	PGA-UW-FHCRC,	2	C,T,	87.000000,1.000000,	0.988636,0.011364,		chr21	34720079	34720080	40.000000
chr21	34720090	34720091	rs17875826	0	+	A	A	A/C	genomic	single	unknown	0.022469	0.103584	intron	exact	1		1	PGA-UW-FHCRC,	2	A,C,	87.000000,1.000000,	0.988636,0.011364,		chr21	34720090	34720091	40.000000
chr21	34720182	34720183	rs7280108	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.323242	0.23903	intron	exact	1		7	1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PGA-UW-FHCRC,	2	A,G,	380.000000,2987.000000,	0.112860,0.887140,	maf-5-some-pop,maf-5-all-pops	chr21	34720182	34720183	60.000000
chr21	34720280	34720281	rs192971287	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34720280	34720281	60.000000
chr21	34720312	34720313	rs2834195	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.080984	0.18421	intron	exact	1		4	1000GENOMES,CHURCH_CG54K,PERLEGEN,PGA-UW-FHCRC,	2	A,G,	57.000000,2675.000000,	0.020864,0.979136,	maf-5-some-pop,maf-5-all-pops	chr21	34720312	34720313	80.000000
chr21	34720383	34720384	rs115076232	0	+	G	G	A/G	genomic	single	by-frequency,by-1000genomes	0.033324	0.124705	intron	exact	1		1	1000GENOMES,	2	A,G,	8.000000,2298.000000,	0.003469,0.996531,		chr21	34720383	34720384	20.000000
chr21	34720692	34720693	rs139148218	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34720692	34720693	0.000000
chr21	34720707	34720708	rs71322203	0	+	A	A	-/AA	genomic	in-del	by-cluster	0.5	0	intron	exact	1	ObservedMismatch	2	HUMANGENOME_JCVI,PJP,	2	-,AA,	1.000000,1.000000,	0.500000,0.500000,		chr21	34720707	34720708	0.000000
chr21	34720708	34720710	rs139925673	0	+	AA	AA	-/AA	genomic	deletion	unknown	0	0	intron	range	1		1	PJP,	0					chr21	34720708	34720710	0.000000
chr21	34720764	34720765	rs143057315	0	+	A	A	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34720764	34720765	40.000000
chr21	34720860	34720861	rs17875829	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.201446	0.24524	intron	exact	1		3	1000GENOMES,BUSHMAN,PGA-UW-FHCRC,	2	A,G,	2135.000000,141.000000,	0.938049,0.061951,	maf-5-some-pop,maf-5-all-pops	chr21	34720860	34720861	0.000000
chr21	34720875	34720876	rs185112227	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34720875	34720876	60.000000
chr21	34721036	34721037	rs17875830	0	+	A	A	A/G	genomic	single	by-cluster,by-1000genomes	0.022985	0.104711	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,G,	2266.000000,8.000000,	0.996482,0.003518,		chr21	34721036	34721037	80.000000
chr21	34721071	34721072	rs17875831	0	+	C	C	C/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.067334	0.170684	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	C,G,	2237.000000,37.000000,	0.983729,0.016271,	maf-5-some-pop,maf-5-all-pops	chr21	34721071	34721072	60.000000
chr21	34721159	34721160	rs148504733	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34721159	34721160	20.000000
chr21	34721345	34721346	rs111859779	0	+	G	G	A/G	genomic	single	unknown	0.5	0	intron	exact	1		1	BUSHMAN,	2	A,G,	1.000000,1.000000,	0.500000,0.500000,		chr21	34721345	34721346	20.000000
chr21	34721347	34721348	rs2834196	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.253694	0.249973	intron	exact	1		11	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,CGM_KYOTO,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,PERLEGEN,PGA-UW-FHCRC,SNP500CANCER,	2	A,G,	2398.000000,434.000000,	0.846751,0.153249,	maf-5-some-pop	chr21	34721347	34721348	20.000000
chr21	34721384	34721385	rs192907116	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34721384	34721385	0.000000
chr21	34721473	34721474	rs141681155	0	+	C	C	C/T	cDNA	single	unknown	0.000443	0.014876	missense	exact	1		1	NHLBI-ESP,	2	C,T,	4513.000000,1.000000,	0.999778,0.000222,		chr21	34721473	34721474	60.000000
chr21	34721474	34721475	rs72552386	0	+	C	C	A/C	genomic	single	by-cluster,by-frequency,by-1000genomes	0.005262	0.051023	coding-synon	exact	1		3	1000GENOMES,NHLBI-ESP,SNP500CANCER,	2	A,C,	19.000000,7097.000000,	0.002670,0.997330,		chr21	34721474	34721475	60.000000
chr21	34721526	34721527	rs17875833	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.006937	0.058485	missense	exact	1		6	1000GENOMES,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PGA-UW-FHCRC,SNP500CANCER,	2	A,G,	22.000000,7912.000000,	0.002773,0.997227,		chr21	34721526	34721527	60.000000
chr21	34721600	34721601	rs189480201	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34721600	34721601	80.000000
chr21	34721636	34721637	rs180819488	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34721636	34721637	40.000000
chr21	34721641	34721642	rs56261250	0	+	T	T	G/T	genomic	single	unknown	0	0	intron	exact	1		1	HGSV,	0					chr21	34721641	34721642	20.000000
chr21	34721681	34721682	rs56226617	0	+	A	A	A/G	cDNA	single	unknown	0	0	intron	exact	1		1	CGM_KYOTO,	0					chr21	34721681	34721682	20.000000
chr21	34721707	34721710	rs72552343	0	+	TCC	TCC	-/TCC	genomic	deletion	by-frequency	0.019416	0.096596	frameshift	range	1		1	SNP500CANCER,	2	-,TCC,	4.000000,404.000000,	0.009804,0.990196,		chr21	34721707	34721710	80.000000
chr21	34721708	34721709	rs112571992	0	+	C	C	C/T	genomic	single	unknown	0.5	0	missense	exact	1		1	BUSHMAN,	2	C,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34721708	34721709	80.000000
chr21	34721723	34721724	rs117784176	0	+	A	A	A/G	cDNA	single	unknown	0.000453	0.015036	missense	exact	1		1	NHLBI-ESP,	2	A,G,	4417.000000,1.000000,	0.999774,0.000226,		chr21	34721723	34721724	20.000000
chr21	34721755	34721756	rs151316665	0	+	C	C	C/T	cDNA	single	unknown	0.000445	0.014909	coding-synon	exact	1		1	NHLBI-ESP,	2	C,T,	4493.000000,1.000000,	0.999777,0.000223,		chr21	34721755	34721756	80.000000
chr21	34721756	34721757	rs139423088	0	+	G	G	A/G	cDNA	single	unknown	0.000444	0.014892	missense	exact	1		1	NHLBI-ESP,	2	A,G,	1.000000,4503.000000,	0.000222,0.999778,		chr21	34721756	34721757	80.000000
chr21	34721781	34721782	rs17875834	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.152524	0.230214	missense	exact	1		7	1000GENOMES,BUSHMAN,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PGA-UW-FHCRC,SNP500CANCER,	2	C,T,	9092.000000,766.000000,	0.922297,0.077703,	maf-5-some-pop	chr21	34721781	34721782	80.000000
chr21	34721889	34721889	rs72549221	0	+	-	-	-/A	genomic	insertion	by-frequency	0.093233	0.194741	intron	between	1		1	SNP500CANCER,	2	-,A,	388.000000,20.000000,	0.950980,0.049020,	maf-5-some-pop				
chr21	34722099	34722100	rs142024555	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722099	34722100	80.000000
chr21	34722228	34722229	rs113802899	0	+	A	A	-/A	genomic	deletion	unknown	0.5	0	intron	exact	1		1	BUSHMAN,	2	-,A,	1.000000,1.000000,	0.500000,0.500000,		chr21	34722228	34722229	0.000000
chr21	34722295	34722296	rs185174295	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722295	34722296	60.000000
chr21	34722363	34722364	rs189500109	0	+	A	A	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722363	34722364	40.000000
chr21	34722392	34722393	rs17875835	0	+	G	G	A/G	genomic	single	by-cluster,by-1000genomes	0.02105	0.100409	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,G,	21.000000,2261.000000,	0.009202,0.990798,		chr21	34722392	34722393	40.000000
chr21	34722530	34722530	rs34086659	0	+	-	-	-/T	genomic	insertion	unknown	0	0	intron	between	1		1	ABI,	0								
chr21	34722568	34722569	rs150692647	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722568	34722569	40.000000
chr21	34722713	34722714	rs181141250	0	+	T	T	G/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722713	34722714	20.000000
chr21	34722716	34722717	rs186467173	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722716	34722717	40.000000
chr21	34722773	34722774	rs139926239	0	+	G	G	G/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34722773	34722774	100.000000
chr21	34722906	34722908	rs138412758	0	+	AC	AC	-/AC	genomic	deletion	by-1000genomes	0	0	intron	range	1		1	1000GENOMES,	0					chr21	34722906	34722908	40.000000
chr21	34723186	34723187	rs17875836	0	+	C	C	C/T	genomic	single	by-cluster,by-1000genomes	0.022985	0.104711	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	C,T,	2267.000000,7.000000,	0.996922,0.003078,		chr21	34723186	34723187	60.000000
chr21	34723312	34723313	rs191648176	0	+	A	A	A/C	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34723312	34723313	60.000000
chr21	34723363	34723364	rs183075699	0	+	T	T	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34723363	34723364	20.000000
chr21	34723390	34723391	rs17875837	0	+	A	A	A/C	genomic	single	by-cluster,by-1000genomes	0.021975	0.102493	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,C,	2257.000000,21.000000,	0.990781,0.009219,		chr21	34723390	34723391	20.000000
chr21	34723423	34723424	rs146833454	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34723423	34723424	0.000000
chr21	34723467	34723468	rs186418631	0	+	C	C	A/C	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34723467	34723468	40.000000
chr21	34723489	34723490	rs17875883	0	+	G	G	A/G	genomic	single	by-cluster,by-1000genomes	0.021503	0.101435	intron	exact	1		3	1000GENOMES,ILLUMINA,PGA-UW-FHCRC,	2	A,G,	7.000000,2273.000000,	0.003070,0.996930,		chr21	34723489	34723490	80.000000
chr21	34723493	34723494	rs2243599	0	+	T	T	G/T	genomic	single	by-cluster,by-frequency,by-submitter,by-2hit-2allele,by-hapmap,by-1000genomes	0.496185	0.043509	intron	exact	1		18	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,WI_SSAHASNP,YUSUKE,	2	G,T,	2581.000000,2469.000000,	0.511089,0.488911,	maf-5-some-pop,maf-5-all-pops,genotype-conflict	chr21	34723493	34723494	20.000000
chr21	34723533	34723534	rs2834197	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.10015	0.200112	intron	exact	1		6	1000GENOMES,CHURCH_CG54K,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,	2	C,T,	3396.000000,116.000000,	0.966970,0.033030,	maf-5-some-pop	chr21	34723533	34723534	80.000000
chr21	34723660	34723661	rs2243600	0	+	T	T	G/T	genomic	single	by-cluster,by-frequency,by-submitter,by-2hit-2allele,by-hapmap,by-1000genomes	0.384082	0.211464	intron	exact	1	InconsistentAlleles	21	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,SSAHASNP,WI_SSAHASNP,YUSUKE,	3	G,N,T,	3768.000000,1.000000,1368.000000,	0.733502,0.000195,0.266303,	maf-5-some-pop,genotype-conflict	chr21	34723660	34723661	0.000000
chr21	34723803	34723804	rs144023707	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34723803	34723804	60.000000
chr21	34723836	34723836	rs72197957	0	+	-	-	-/T	genomic	insertion	unknown	0	0	intron	between	1		1	DEVINE_LAB,	0								
chr21	34723862	34723863	rs144910940	0	+	T	T	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34723862	34723863	0.000000
chr21	34723871	34723872	rs76665724	0	+	T	T	G/T	genomic	single	by-1000genomes	0	0	intron	exact	1		2	1000GENOMES,ENSEMBL,	2	G,T,	49.000000,2141.000000,	0.022374,0.977626,		chr21	34723871	34723872	40.000000
chr21	34724102	34724103	rs17875841	0	+	A	A	A/G	genomic	single	by-cluster,by-1000genomes	0.022469	0.103584	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,G,	2267.000000,9.000000,	0.996046,0.003954,		chr21	34724102	34724103	0.000000
chr21	34724104	34724105	rs118172663	0	+	A	A	A/G	genomic	single	by-1000genomes	0.016528	0.089391	intron	exact	1		1	1000GENOMES,	2	A,G,	2306.000000,2.000000,	0.999133,0.000867,		chr21	34724104	34724105	0.000000
chr21	34724129	34724130	rs73364242	0	+	A	A	A/G	genomic	single	by-cluster,by-1000genomes	0.5	0	intron	exact	1		2	1000GENOMES,COMPLETE_GENOMICS,	2	A,G,	2181.000000,9.000000,	0.995890,0.004110,		chr21	34724129	34724130	20.000000
chr21	34724149	34724150	rs182190655	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724149	34724150	60.000000
chr21	34724162	34724163	rs17875884	0	+	C	C	A/C	genomic	single	by-cluster,by-frequency,by-1000genomes	0.061793	0.164554	intron	exact	1		4	1000GENOMES,BUSHMAN,ILLUMINA,PGA-UW-FHCRC,	2	A,C,	9.000000,2273.000000,	0.003944,0.996056,		chr21	34724162	34724163	80.000000
chr21	34724255	34724256	rs17875842	0	+	C	C	A/C	genomic	single	by-cluster,by-frequency,by-1000genomes	0.065857	0.16909	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,C,	49.000000,2227.000000,	0.021529,0.978471,	maf-5-some-pop,maf-5-all-pops	chr21	34724255	34724256	80.000000
chr21	34724381	34724382	rs77499692	0	+	A	A	A/G	genomic	single	by-frequency,by-1000genomes	0.006378	0.05611	intron	exact	1		1	1000GENOMES,	2	A,G,	4362.000000,14.000000,	0.996801,0.003199,		chr21	34724381	34724382	40.000000
chr21	34724400	34724401	rs146983841	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724400	34724401	40.000000
chr21	34724412	34724413	rs188009597	0	+	G	G	C/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724412	34724413	60.000000
chr21	34724431	34724432	rs192386008	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724431	34724432	0.000000
chr21	34724439	34724440	rs183068634	0	+	G	G	C/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724439	34724440	80.000000
chr21	34724495	34724496	rs17875843	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.042533	0.13949	intron	exact	1		3	1000GENOMES,BUSHMAN,PGA-UW-FHCRC,	2	A,G,	2274.000000,6.000000,	0.997368,0.002632,		chr21	34724495	34724496	60.000000
chr21	34724603	34724604	rs188012345	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724603	34724604	20.000000
chr21	34724713	34724714	rs62226370	0	+	G	G	A/G	genomic	single	by-1000genomes	0.5	0	intron	exact	1		3	1000GENOMES,BCMHGSC_JDW,ENSEMBL,	2	A,G,	27.000000,2163.000000,	0.012329,0.987671,		chr21	34724713	34724714	80.000000
chr21	34724767	34724768	rs147057264	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724767	34724768	80.000000
chr21	34724769	34724770	rs138180316	0	+	G	G	C/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724769	34724770	80.000000
chr21	34724823	34724824	rs17875844	0	+	G	G	G/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.096835	0.197586	intron	exact	1		4	1000GENOMES,BUSHMAN,HGSV,PGA-UW-FHCRC,	2	G,T,	2266.000000,20.000000,	0.991251,0.008749,	maf-5-some-pop,maf-5-all-pops	chr21	34724823	34724824	60.000000
chr21	34724868	34724869	rs149560617	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724868	34724869	60.000000
chr21	34724872	34724873	rs144208924	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724872	34724873	60.000000
chr21	34724911	34724912	rs184491960	0	+	A	A	A/C	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34724911	34724912	0.000000
chr21	34724912	34724913	rs72287799	0	+	A	A	-/AAAAC	genomic	in-del	unknown	0.5	0	intron	exact	1	ObservedMismatch	2	BUSHMAN,DEVINE_LAB,	2	-,AAAAC,	1.000000,1.000000,	0.500000,0.500000,		chr21	34724912	34724913	0.000000
chr21	34724920	34724925	rs10565233	0	+	ACAAA	ACAAA	-/ACAAA	genomic	deletion	unknown	0	0	intron	range	1		1	DEVINE_LAB,	0					chr21	34724920	34724925	20.000000
chr21	34724946	34724947	rs7277786	0	+	A	A	A/G	genomic	single	unknown	0	0	intron	exact	1	SingleAlleleFreq	1	BCM_SSAHASNP,	1	A,	420.000000,	1.000000,		chr21	34724946	34724947	40.000000
chr21	34725001	34725002	rs17875845	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.102788	0.202061	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	C,T,	2229.000000,51.000000,	0.977632,0.022368,	maf-5-some-pop,maf-5-all-pops	chr21	34725001	34725002	60.000000
chr21	34725089	34725090	rs17875885	0	+	T	T	C/T	genomic	single	by-cluster,by-frequency	0.002712	0.036721	coding-synon	exact	1		5	ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PGA-UW-FHCRC,SNP500CANCER,	2	C,T,	7.000000,5149.000000,	0.001358,0.998642,		chr21	34725089	34725090	40.000000
chr21	34725177	34725178	rs11544557	0	-	G	G	A/C	genomic	single	by-cluster	0	0	missense	exact	1	SingleAlleleFreq	2	CGAP-GAI,SNP500CANCER,	1	C,	396.000000,	1.000000,		chr21	34725177	34725178	40.000000
chr21	34725298	34725298	rs71749836	0	+	-	-	-/A	genomic	insertion	unknown	0	0	intron	between	1		1	DEVINE_LAB,	0								
chr21	34725359	34725360	rs17875846	0	+	A	A	A/C	genomic	single	by-cluster,by-1000genomes	0.004175	0.0455	intron	exact	1		3	1000GENOMES,PGA-UW-FHCRC,SNP500CANCER,	2	A,C,	2652.000000,14.000000,	0.994749,0.005251,		chr21	34725359	34725360	20.000000
chr21	34725389	34725390	rs2834198	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.081373	0.184567	intron	exact	1	NonIntegerChromCount	7	1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,SNP500CANCER,	2	C,T,	3967.010010,126.989998,	0.968981,0.031019,	maf-5-some-pop,genotype-conflict	chr21	34725389	34725390	40.000000
chr21	34725390	34725391	rs34833954	0	+	G	G	A/G	genomic	single	by-cluster,by-1000genomes	0	0	intron	exact	1		3	1000GENOMES,ILLUMINA,RIKENSNPRC,	2	A,G,	9.000000,2183.000000,	0.004106,0.995894,		chr21	34725390	34725391	40.000000
chr21	34725467	34725468	rs914141	0	+	T	T	G/T	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-hapmap,by-1000genomes	0.232302	0.249373	intron	exact	1		19	1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,SSAHASNP,TSC-CSHL,	2	G,T,	2409.000000,435.000000,	0.847046,0.152954,	maf-5-some-pop	chr21	34725467	34725468	20.000000
chr21	34725590	34725590	rs34742406	0	+	-	-	-/G	genomic	insertion	unknown	0	0	intron	between	1		1	ABI,	0								
chr21	34725747	34725748	rs117954151	0	+	T	T	G/T	genomic	single	by-1000genomes	0.016528	0.089391	intron	exact	1		1	1000GENOMES,	2	G,T,	2.000000,2306.000000,	0.000867,0.999133,		chr21	34725747	34725748	60.000000
chr21	34725783	34725784	rs118092655	0	+	A	A	A/G	genomic	single	by-frequency,by-1000genomes	0.032778	0.123752	intron	exact	1		1	1000GENOMES,	2	A,G,	2305.000000,3.000000,	0.998700,0.001300,		chr21	34725783	34725784	40.000000
chr21	34725806	34725807	rs914142	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-1000genomes	0.257513	0.249887	intron	exact	1	NonIntegerChromCount	23	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,SNP500CANCER,SSAHASNP,TSC-CSHL,	2	A,G,	4263.850098,784.145996,	0.844662,0.155338,	maf-5-some-pop	chr21	34725806	34725807	60.000000
chr21	34726014	34726015	rs142424349	0	+	G	G	A/G	cDNA	single	unknown	0.00044	0.01483	missense	exact	1		1	NHLBI-ESP,	2	A,G,	1.000000,4541.000000,	0.000220,0.999780,		chr21	34726014	34726015	20.000000
chr21	34726019	34726020	rs80214730	0	+	G	G	A/G	cDNA	single	by-cluster,by-frequency,by-1000genomes	0.01616	0.088423	coding-synon	exact	1		3	1000GENOMES,NHLBI-ESP,SEATTLESEQ,	2	A,G,	50.000000,6680.000000,	0.007429,0.992571,		chr21	34726019	34726020	80.000000
chr21	34726020	34726021	rs74695849	0	+	A	A	A/G	genomic	single	unknown	0	0	missense	exact	1		1	ILLUMINA,	0					chr21	34726020	34726021	20.000000
chr21	34726126	34726127	rs2856973	0	+	T	T	A/T	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-1000genomes	0.225225	0.248769	intron	exact	1		22	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,SSAHASNP,WUGSC_SSAHASNP,	2	A,T,	4936.000000,793.000000,	0.861581,0.138419,	maf-5-some-pop	chr21	34726126	34726127	20.000000
chr21	34726145	34726146	rs146369457	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34726145	34726146	20.000000
chr21	34726158	34726159	rs2856974	0	+	G	G	G/T	genomic	single	unknown	0	0	intron	exact	1	SingleAlleleFreq	1	SC_JCM,	1	G,	416.000000,	1.000000,		chr21	34726158	34726159	60.000000
chr21	34726165	34726166	rs17875850	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.070494	0.174004	intron	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,G,	37.000000,2233.000000,	0.016300,0.983700,	maf-5-some-pop,maf-5-all-pops	chr21	34726165	34726166	60.000000
chr21	34726229	34726230	rs2254180	0	+	T	T	C/T	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.335467	0.234937	intron	exact	1		14	1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PGA-UW-FHCRC,PJP,RIKENSNPRC,SC_JCM,SSAHASNP,WUGSC_SSAHASNP,	2	C,T,	777.000000,2701.000000,	0.223404,0.776596,	maf-5-some-pop,maf-5-all-pops	chr21	34726229	34726230	20.000000
chr21	34726346	34726347	rs76397563	0	+	G	G	A/G	genomic	single	by-cluster,by-1000genomes	0.5	0	intron	exact	1		2	1000GENOMES,ILLUMINA-UK,	2	A,G,	5.000000,2185.000000,	0.002283,0.997717,		chr21	34726346	34726347	40.000000
chr21	34726508	34726509	rs144059103	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34726508	34726509	80.000000
chr21	34726596	34726597	rs17875886	0	+	G	G	A/G	genomic	single	unknown	0.024093	0.107079	intron	exact	1		1	PGA-UW-FHCRC,	2	A,G,	1.000000,81.000000,	0.012195,0.987805,		chr21	34726596	34726597	80.000000
chr21	34726613	34726614	rs150956469	0	+	C	C	C/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34726613	34726614	60.000000
chr21	34726747	34726748	rs114441765	0	+	A	A	A/G	genomic	single	by-frequency,by-1000genomes	0.049555	0.149404	intron	exact	1		1	1000GENOMES,	2	A,G,	2298.000000,8.000000,	0.996531,0.003469,		chr21	34726747	34726748	40.000000
chr21	34726802	34726803	rs189229688	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34726802	34726803	60.000000
chr21	34726866	34726867	rs192636192	0	+	T	T	A/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34726866	34726867	20.000000
chr21	34726867	34726868	rs17875852	0	+	A	A	-/A	genomic	deletion	by-frequency	0.183626	0.241028	intron	exact	1		1	PGA-UW-FHCRC,	2	-,A,	79.000000,9.000000,	0.897727,0.102273,	maf-5-some-pop,maf-5-all-pops	chr21	34726867	34726868	20.000000
chr21	34727014	34727015	rs7279125	0	+	A	A	A/C	genomic	single	by-cluster,by-frequency,by-1000genomes	0.041413	0.137809	intron	exact	1		5	1000GENOMES,BCM_SSAHASNP,BUSHMAN,ILLUMINA-UK,PGA-UW-FHCRC,	2	A,C,	2682.000000,26.000000,	0.990399,0.009601,	maf-5-some-pop	chr21	34727014	34727015	40.000000
chr21	34727230	34727231	rs2254305	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-submitter,by-2hit-2allele,by-hapmap,by-1000genomes	0.249799	0.25	intron	exact	1		21	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,SC_SNP,SSAHASNP,	2	C,T,	447.000000,2404.000000,	0.156787,0.843213,	maf-5-some-pop	chr21	34727230	34727231	20.000000
chr21	34727251	34727252	rs1041867	0	+	T	T	G/T	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-hapmap,by-1000genomes	0.497818	0.032962	intron	exact	1		21	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,RIKENSNPRC,SSAHASNP,TSC-CSHL,	2	G,T,	2157.000000,2256.000000,	0.488783,0.511217,	maf-5-some-pop,maf-5-all-pops	chr21	34727251	34727252	20.000000
chr21	34727296	34727307	rs34554477	0	+	AAAAAAAAAAA	AAAAAAAAAAA	(A)9/11	genomic	microsatellite	unknown	0	0	intron	range	1		1	RIKENSNPRC,	0				observed-mismatch	chr21	34727296	34727307	14.545455
chr21	34727321	34727322	rs149668650	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34727321	34727322	60.000000
chr21	34727329	34727330	rs1041868	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-1000genomes	0.372036	0.218191	intron	exact	1		17	1000GENOMES,ABI,BCMHGSC_JDW,CHURCH_CG54K,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PGA-UW-FHCRC,PJP,RIKENSNPRC,SC_JCM,SC_SNP,TSC-CSHL,WUGSC_SSAHASNP,	2	A,G,	1016.000000,3208.000000,	0.240530,0.759470,	maf-5-some-pop,maf-5-all-pops	chr21	34727329	34727330	100.000000
chr21	34727334	34727335	rs111578791	0	+	T	T	C/T	genomic	single	by-frequency	0.5	0	intron	exact	1		1	BUSHMAN,	2	C,T,	2.000000,2.000000,	0.500000,0.500000,		chr21	34727334	34727335	60.000000
chr21	34727365	34727366	rs184755883	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34727365	34727366	60.000000
chr21	34727486	34727487	rs2254315	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-submitter,by-2hit-2allele,by-1000genomes	0.346735	0.230526	intron	exact	1		18	1000GENOMES,ABI,AFFY,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,PJP,RIKENSNPRC,SC_JCM,SC_SNP,SSAHASNP,WUGSC_SSAHASNP,	2	C,T,	3404.000000,1002.000000,	0.772583,0.227417,	maf-5-some-pop,maf-5-all-pops	chr21	34727486	34727487	80.000000
chr21	34727515	34727516	rs2834199	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.057008	0.158915	intron	exact	1		3	1000GENOMES,PERLEGEN,PGA-UW-FHCRC,	2	A,G,	72.000000,3410.000000,	0.020678,0.979322,	maf-5-some-pop	chr21	34727515	34727516	40.000000
chr21	34727537	34727538	rs189352826	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	intron	exact	1		1	1000GENOMES,	0					chr21	34727537	34727538	20.000000
chr21	34727650	34727651	rs147871209	0	+	T	T	C/T	cDNA	single	unknown	0.000542	0.016451	coding-synon	exact	1		1	NHLBI-ESP,	2	C,T,	1.000000,3689.000000,	0.000271,0.999729,		chr21	34727650	34727651	60.000000
chr21	34727672	34727673	rs150725396	0	+	C	C	A/C	genomic	single	unknown	0	0	missense	exact	1		1	YSAMUELS,	0				clinically-assoc,submitted-by-lsdb	chr21	34727672	34727673	20.000000
chr21	34727676	34727677	rs113181057	0	+	T	T	C/T	genomic	single	unknown	0.5	0	missense	exact	1		1	COMPLETE_GENOMICS,	2	C,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34727676	34727677	40.000000
chr21	34727850	34727851	rs141582204	0	+	T	T	C/T	cDNA	single	unknown	0.000477	0.01544	missense	exact	1		1	NHLBI-ESP,	2	C,T,	1.000000,4189.000000,	0.000239,0.999761,		chr21	34727850	34727851	20.000000
chr21	34727882	34727883	rs113668823	0	+	G	G	A/G	genomic	single	unknown	0.5	0	untranslated-3	exact	1		1	BUSHMAN,	2	A,G,	1.000000,1.000000,	0.500000,0.500000,		chr21	34727882	34727883	40.000000
chr21	34727906	34727907	rs1803789	0	+	G	G	G/T	cDNA	single	unknown	0	0	untranslated-3	exact	1		1	HGBASE,	2	G,T,	252.000000,0.000000,	1.000000,0.000000,		chr21	34727906	34727907	80.000000
chr21	34727923	34727924	rs145435605	0	+	C	C	C/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34727923	34727924	60.000000
chr21	34728114	34728114	rs34709725	0	+	-	-	-/T	genomic	insertion	unknown	0	0	untranslated-3	between	1		1	ABI,	0								
chr21	34728200	34728201	rs11910076	0	+	T	T	A/T	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-hapmap,by-1000genomes	0.119511	0.213243	untranslated-3	exact	1		5	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,PGA-UW-FHCRC,	2	A,T,	39.000000,2243.000000,	0.017090,0.982910,	maf-5-some-pop,maf-5-all-pops	chr21	34728200	34728201	40.000000
chr21	34728236	34728237	rs11909934	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-hapmap,by-1000genomes	0.121928	0.214704	untranslated-3	exact	1		5	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,PGA-UW-FHCRC,	2	A,G,	38.000000,2242.000000,	0.016667,0.983333,	maf-5-some-pop,maf-5-all-pops	chr21	34728236	34728237	60.000000
chr21	34728248	34728249	rs180879239	0	+	G	G	G/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728248	34728249	60.000000
chr21	34728348	34728349	rs147623193	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728348	34728349	40.000000
chr21	34728438	34728439	rs74717635	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.032778	0.123752	untranslated-3	exact	1		2	1000GENOMES,GMI,	2	C,T,	2286.000000,22.000000,	0.990468,0.009532,		chr21	34728438	34728439	80.000000
chr21	34728442	34728443	rs184730135	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728442	34728443	80.000000
chr21	34728443	34728444	rs73364247	0	+	G	G	G/T	genomic	single	by-cluster,by-1000genomes	0.5	0	untranslated-3	exact	1		2	1000GENOMES,COMPLETE_GENOMICS,	2	G,T,	2181.000000,9.000000,	0.995890,0.004110,		chr21	34728443	34728444	80.000000
chr21	34728460	34728461	rs189766456	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728460	34728461	40.000000
chr21	34728464	34728465	rs143733167	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728464	34728465	40.000000
chr21	34728502	34728503	rs148116497	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728502	34728503	60.000000
chr21	34728651	34728652	rs77188562	0	+	G	G	G/T	genomic	single	unknown	0	0	untranslated-3	exact	1		1	GMI,	0					chr21	34728651	34728652	40.000000
chr21	34728652	34728653	rs75956434	0	+	A	A	A/G	genomic	single	unknown	0	0	untranslated-3	exact	1		1	GMI,	0					chr21	34728652	34728653	40.000000
chr21	34728653	34728654	rs76519737	0	+	A	A	A/T	genomic	single	unknown	0	0	untranslated-3	exact	1		1	GMI,	0					chr21	34728653	34728654	40.000000
chr21	34728678	34728679	rs17875887	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.029505	0.117822	untranslated-3	exact	1		4	1000GENOMES,ILLUMINA,KRIBB_YJKIM,PGA-UW-FHCRC,	2	A,G,	17.000000,3039.000000,	0.005563,0.994437,		chr21	34728678	34728679	60.000000
chr21	34728684	34728685	rs112756879	0	+	A	A	A/C	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		2	1000GENOMES,BUSHMAN,	2	A,C,	2186.000000,3.000000,	0.998630,0.001370,		chr21	34728684	34728685	20.000000
chr21	34728771	34728772	rs186203933	0	+	C	C	C/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728771	34728772	20.000000
chr21	34728781	34728782	rs17875860	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency	0.013985	0.082444	untranslated-3	exact	1		3	ILLUMINA,KRIBB_YJKIM,PGA-UW-FHCRC,	2	A,G,	2.000000,282.000000,	0.007042,0.992958,		chr21	34728781	34728782	60.000000
chr21	34728827	34728828	rs909141	0	+	G	G	A/G	genomic	single	unknown	0	0	untranslated-3	exact	1	SingleAlleleFreq	2	SC_JCM,TSC-CSHL,	1	G,	420.000000,	1.000000,		chr21	34728827	34728828	40.000000
chr21	34728978	34728979	rs140966052	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34728978	34728979	40.000000
chr21	34728998	34728999	rs2834200	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-submitter,by-2hit-2allele,by-hapmap,by-1000genomes	0.076967	0.180443	untranslated-3	exact	1		8	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,	2	A,G,	87.000000,3423.000000,	0.024786,0.975214,	maf-5-some-pop	chr21	34728998	34728999	20.000000
chr21	34729015	34729016	rs190977407	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729015	34729016	40.000000
chr21	34729020	34729021	rs150199046	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729020	34729021	40.000000
chr21	34729105	34729106	rs181822544	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729105	34729106	80.000000
chr21	34729106	34729107	rs187189466	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729106	34729107	80.000000
chr21	34729170	34729171	rs17875862	0	+	A	A	A/G	genomic	single	by-cluster,by-1000genomes	0.02105	0.100409	untranslated-3	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	A,G,	2268.000000,14.000000,	0.993865,0.006135,		chr21	34729170	34729171	40.000000
chr21	34729232	34729233	rs17875863	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.172933	0.237825	untranslated-3	exact	1		4	1000GENOMES,ILLUMINA,KRIBB_YJKIM,PGA-UW-FHCRC,	2	A,G,	222.000000,3514.000000,	0.059422,0.940578,	maf-5-some-pop	chr21	34729232	34729233	60.000000
chr21	34729253	34729254	rs190868571	0	+	C	C	A/C	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729253	34729254	80.000000
chr21	34729310	34729311	rs138687780	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729310	34729311	20.000000
chr21	34729327	34729328	rs116047600	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729327	34729328	40.000000
chr21	34729376	34729377	rs2834201	0	+	G	G	G/T	genomic	single	by-cluster,by-frequency,by-submitter,by-1000genomes	0.072504	0.176055	untranslated-3	exact	1		6	1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PGA-UW-FHCRC,	2	G,T,	3840.000000,100.000000,	0.974619,0.025381,	maf-5-some-pop	chr21	34729376	34729377	20.000000
chr21	34729399	34729400	rs17875888	0	+	G	G	C/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.061793	0.164554	untranslated-3	exact	1		3	1000GENOMES,ILLUMINA,PGA-UW-FHCRC,	2	C,G,	16.000000,2266.000000,	0.007011,0.992989,	maf-5-some-pop	chr21	34729399	34729400	80.000000
chr21	34729470	34729471	rs146387063	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729470	34729471	60.000000
chr21	34729480	34729481	rs17875865	0	+	C	C	C/G	genomic	single	unknown	0.021503	0.101435	untranslated-3	exact	1		1	PGA-UW-FHCRC,	2	C,G,	91.000000,1.000000,	0.989130,0.010870,		chr21	34729480	34729481	60.000000
chr21	34729483	34729484	rs6517166	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-1000genomes	0.037971	0.132452	untranslated-3	exact	1		8	1000GENOMES,BCM_SSAHASNP,BUSHMAN,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PGA-UW-FHCRC,WI_SSAHASNP,	2	C,T,	3338.000000,38.000000,	0.988744,0.011256,	maf-5-some-pop	chr21	34729483	34729484	60.000000
chr21	34729527	34729528	rs138450588	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729527	34729528	80.000000
chr21	34729623	34729624	rs142945758	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729623	34729624	80.000000
chr21	34729628	34729629	rs144316209	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729628	34729629	80.000000
chr21	34729660	34729661	rs148638441	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729660	34729661	40.000000
chr21	34729666	34729667	rs78206899	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.00365	0.042562	untranslated-3	exact	1		2	1000GENOMES,GMI,	2	C,T,	4368.000000,8.000000,	0.998172,0.001828,		chr21	34729666	34729667	60.000000
chr21	34729694	34729695	rs182727976	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34729694	34729695	60.000000
chr21	34729706	34729707	rs115068570	0	+	G	G	A/G	genomic	single	by-frequency,by-1000genomes	0.033324	0.124705	untranslated-3	exact	1		1	1000GENOMES,	2	A,G,	13.000000,2293.000000,	0.005637,0.994363,		chr21	34729706	34729707	80.000000
chr21	34729827	34729828	rs116702860	0	+	C	C	C/T	genomic	single	by-frequency,by-1000genomes	0.033324	0.124705	untranslated-3	exact	1		1	1000GENOMES,	2	C,T,	2270.000000,36.000000,	0.984389,0.015611,		chr21	34729827	34729828	60.000000
chr21	34729835	34729836	rs76119037	0	+	G	G	G/T	genomic	single	unknown	0.5	0	untranslated-3	exact	1		1	ENSEMBL,	2	G,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34729835	34729836	20.000000
chr21	34729836	34729837	rs71322204	0	+	T	T	-/T	genomic	deletion	unknown	0.5	0	untranslated-3	exact	1		1	HUMANGENOME_JCVI,	2	-,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34729836	34729837	20.000000
chr21	34729838	34729839	rs79979883	0	+	T	T	G/T	genomic	single	unknown	0	0	untranslated-3	exact	1	SingleAlleleFreq	1	ENSEMBL,	1	G,	2.000000,	1.000000,		chr21	34729838	34729839	20.000000
chr21	34729850	34729851	rs36125058	0	+	T	T	-/T	genomic	deletion	by-cluster	0	0	untranslated-3	exact	1	SingleAlleleFreq	2	ABI,HUMANGENOME_JCVI,	1	-,	2.000000,	1.000000,		chr21	34729850	34729851	40.000000
chr21	34729922	34729923	rs17875867	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.176512	0.238955	untranslated-3	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	C,T,	2165.000000,115.000000,	0.949561,0.050439,	maf-5-some-pop,maf-5-all-pops	chr21	34729922	34729923	100.000000
chr21	34730075	34730076	rs17875868	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.042533	0.13949	untranslated-3	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	C,T,	2244.000000,36.000000,	0.984211,0.015789,		chr21	34730075	34730076	80.000000
chr21	34730079	34730080	rs17875869	0	+	C	C	C/T	genomic	single	by-cluster,by-1000genomes	0.021503	0.101435	untranslated-3	exact	1		2	1000GENOMES,PGA-UW-FHCRC,	2	C,T,	2267.000000,13.000000,	0.994298,0.005702,		chr21	34730079	34730080	80.000000
chr21	34730093	34730093	rs34579816	0	+	-	-	-/C	genomic	insertion	unknown	0	0	untranslated-3	between	1		1	ABI,	0								
chr21	34730255	34730256	rs188247519	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730255	34730256	60.000000
chr21	34730301	34730302	rs17875889	0	+	C	C	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.042533	0.13949	untranslated-3	exact	1		3	1000GENOMES,ILLUMINA,PGA-UW-FHCRC,	2	C,T,	2247.000000,33.000000,	0.985526,0.014474,		chr21	34730301	34730302	60.000000
chr21	34730349	34730350	rs145323256	0	+	A	A	A/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730349	34730350	60.000000
chr21	34730424	34730425	rs147639443	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730424	34730425	60.000000
chr21	34730429	34730430	rs17875870	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.0768	0.180282	untranslated-3	exact	1		3	1000GENOMES,CHURCH_CG54K,PGA-UW-FHCRC,	2	A,G,	2250.000000,38.000000,	0.983392,0.016608,	maf-5-some-pop,maf-5-all-pops	chr21	34730429	34730430	20.000000
chr21	34730459	34730460	rs142233198	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730459	34730460	60.000000
chr21	34730500	34730501	rs149720401	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730500	34730501	40.000000
chr21	34730531	34730532	rs190206571	0	+	G	G	C/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730531	34730532	80.000000
chr21	34730602	34730603	rs182824129	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730602	34730603	20.000000
chr21	34730639	34730640	rs145551344	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730639	34730640	40.000000
chr21	34730692	34730696	rs141601938	0	+	AGAG	AGAG	-/AGAG	genomic	deletion	by-cluster,by-1000genomes	0	0	untranslated-3	range	1		2	1000GENOMES,PJP,	0					chr21	34730692	34730696	30.000000
chr21	34730695	34730699	rs17875871	0	+	GAGA	GAGA	-/GAGA	genomic	deletion	by-cluster,by-frequency	0.21875	0.248039	untranslated-3	range	1		4	CGM_KYOTO,DEVINE_LAB,ILLUMINA,PGA-UW-FHCRC,	2	-,GAGA,	11.000000,77.000000,	0.125000,0.875000,	maf-5-some-pop,maf-5-all-pops	chr21	34730695	34730699	60.000000
chr21	34730745	34730746	rs187251041	0	+	C	C	A/C	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730745	34730746	60.000000
chr21	34730863	34730864	rs149169161	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	untranslated-3	exact	1		1	1000GENOMES,	0					chr21	34730863	34730864	60.000000
chr21	34730902	34730902	rs35166284	0	+	-	-	-/A	genomic	insertion	unknown	0	0	untranslated-3	between	1		1	ABI,	0								
chr21	34730953	34730954	rs2834202	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-submitter,by-2hit-2allele,by-hapmap,by-1000genomes	0.258342	0.249861	untranslated-3	exact	1		20	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGM_KYOTO,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,WUGSC_SSAHASNP,	2	A,G,	3498.000000,652.000000,	0.842892,0.157108,	maf-5-some-pop	chr21	34730953	34730954	20.000000
chr21	34730986	34730987	rs12627216	0	+	A	A	A/G	genomic	single	by-hapmap	0	0	untranslated-3	exact	1	SingleAlleleFreq	1	CSHL-HAPMAP,	1	A,	420.000000,	1.000000,		chr21	34730986	34730987	20.000000
chr21	34731107	34731108	rs35533087	0	+	T	T	C/T	genomic	single	by-frequency,by-1000genomes	0.444444	0.157135	untranslated-3	exact	1		3	1000GENOMES,ABI,ENSEMBL,	2	C,T,	36.000000,2158.000000,	0.016408,0.983592,	maf-5-some-pop,maf-5-all-pops	chr21	34731107	34731108	40.000000
chr21	34731163	34731163	rs34774717	0	+	-	-	-/T	genomic	insertion	unknown	0	0	untranslated-3	between	1		1	ABI,	0								
chr21	34731166	34731166	rs34394035	0	+	-	-	-/A	genomic	insertion	unknown	0	0	untranslated-3	between	1		1	ABI,	0								
chr21	34731251	34731252	rs73900320	0	+	C	C	C/G	genomic	single	by-cluster,by-1000genomes	0.5	0	untranslated-3	exact	1		2	1000GENOMES,ILLUMINA-UK,	2	C,G,	2182.000000,8.000000,	0.996347,0.003653,		chr21	34731251	34731252	40.000000
chr21	34731467	34731467	rs146173990	0	+	GT	GT	-/GGTTTTTTTT	genomic	in-del	by-cluster,by-1000genomes	0	0	untranslated-3	between	1	ObservedMismatch	1	1000GENOMES,	0								
chr21	34731733	34731733	rs150679180	0	+	TG	TG	-/G	genomic	in-del	by-1000genomes	0	0	untranslated-3	between	1	ObservedMismatch	1	1000GENOMES,	0				observed-mismatch				
chr21	34731825	34731826	rs116519917	0	+	A	A	A/G	genomic	single	by-frequency,by-1000genomes	0.196064	0.244113	untranslated-3	exact	1		1	1000GENOMES,	2	A,G,	2247.000000,59.000000,	0.974415,0.025585,	maf-5-some-pop,maf-5-all-pops	chr21	34731825	34731826	60.000000
chr21	34731928	34731929	rs2843998	0	+	G	G	A/G	genomic	single	unknown	0	0	untranslated-3	exact	1	SingleAlleleFreq	1	SC_JCM,	1	G,	420.000000,	1.000000,		chr21	34731928	34731929	60.000000
chr21	34731986	34731987	rs117070822	0	+	G	G	C/G	genomic	single	by-1000genomes	0.016528	0.089391	untranslated-3	exact	1		1	1000GENOMES,	2	C,G,	10.000000,2298.000000,	0.004333,0.995667,		chr21	34731986	34731987	40.000000
chr21	34732042	34732043	rs76779730	0	+	G	G	A/G	genomic	single	by-frequency,by-1000genomes	0.006378	0.05611	untranslated-3	exact	1		1	1000GENOMES,	2	A,G,	14.000000,4362.000000,	0.003199,0.996801,		chr21	34732042	34732043	40.000000
chr21	34732113	34732114	rs117254882	0	+	C	C	A/C	genomic	single	by-1000genomes	0.016528	0.089391	untranslated-3	exact	1		1	1000GENOMES,	2	A,C,	5.000000,2303.000000,	0.002166,0.997834,		chr21	34732113	34732114	60.000000
chr21	34732265	34732266	rs11908899	0	+	T	T	C/T	genomic	single	by-cluster,by-frequency,by-hapmap,by-1000genomes	0.013244	0.080292	near-gene-3	exact	1		4	1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,	2	C,T,	48.000000,2440.000000,	0.019293,0.980707,	maf-5-some-pop,maf-5-all-pops	chr21	34732265	34732266	20.000000
chr21	34732268	34732269	rs192175664	0	+	A	A	A/T	genomic	single	by-1000genomes	0	0	near-gene-3	exact	1		1	1000GENOMES,	0					chr21	34732268	34732269	20.000000
chr21	34732443	34732444	rs184537477	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	near-gene-3	exact	1		1	1000GENOMES,	0					chr21	34732443	34732444	40.000000
chr21	34732522	34732523	rs11908745	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-hapmap,by-1000genomes	0.041164	0.137431	near-gene-3	exact	1		2	1000GENOMES,CSHL-HAPMAP,	2	A,G,	4284.000000,92.000000,	0.978976,0.021024,		chr21	34732522	34732523	60.000000
chr21	34732565	34732566	rs12626220	0	+	G	G	A/G	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-hapmap,by-1000genomes	0.5	0	near-gene-3	exact	1		9	1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,	2	A,G,	510.000000,1692.000000,	0.231608,0.768392,		chr21	34732565	34732566	80.000000
chr21	34732578	34732579	rs138483913	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	near-gene-3	exact	1		1	1000GENOMES,	0					chr21	34732578	34732579	40.000000
chr21	34732643	34732644	rs143010303	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34732643	34732644	80.000000
chr21	34732651	34732652	rs188819986	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34732651	34732652	60.000000
chr21	34732702	34732703	rs71322205	0	+	T	T	-/T	genomic	deletion	by-cluster	0.5	0	unknown	exact	1		2	GMI,HUMANGENOME_JCVI,	2	-,T,	1.000000,1.000000,	0.500000,0.500000,		chr21	34732702	34732703	20.000000
chr21	34732707	34732708	rs192702167	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34732707	34732708	0.000000
chr21	34732708	34732709	rs71929997	0	+	T	T	-/T	genomic	deletion	unknown	0	0	unknown	exact	1		1	DEVINE_LAB,	0					chr21	34732708	34732709	0.000000
chr21	34732716	34732717	rs72343807	0	+	T	T	-/T	genomic	deletion	unknown	0	0	unknown	exact	1		1	DEVINE_LAB,	0					chr21	34732716	34732717	20.000000
chr21	34732726	34732727	rs115742441	0	+	A	A	A/G	genomic	single	by-frequency,by-1000genomes	0.140908	0.224942	unknown	exact	1		1	1000GENOMES,	2	A,G,	2251.000000,55.000000,	0.976149,0.023851,	maf-5-some-pop,maf-5-all-pops	chr21	34732726	34732727	40.000000
chr21	34732793	34732794	rs150672151	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34732793	34732794	60.000000
chr21	34732823	34732824	rs138871805	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34732823	34732824	80.000000
chr21	34732945	34732946	rs149279677	0	+	G	G	C/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34732945	34732946	40.000000
chr21	34732991	34732992	rs13050444	0	+	T	T	G/T	genomic	single	unknown	0	0	unknown	exact	1		1	SSAHASNP,	0					chr21	34732991	34732992	40.000000
chr21	34733035	34733036	rs184547337	0	+	A	A	A/T	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34733035	34733036	40.000000
chr21	34733049	34733050	rs144495706	0	+	C	C	C/T	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34733049	34733050	20.000000
chr21	34733076	34733077	rs78406477	0	+	C	C	C/T	genomic	single	by-1000genomes	0.152778	0.230321	unknown	exact	1		2	1000GENOMES,CHURCH_CG54K,	2	C,T,	2153.000000,47.000000,	0.978636,0.021364,	maf-5-some-pop,maf-5-all-pops	chr21	34733076	34733077	60.000000
chr21	34733093	34733094	rs114712791	0	+	G	G	G/T	genomic	single	by-frequency,by-1000genomes	0.049555	0.149404	unknown	exact	1		1	1000GENOMES,	2	G,T,	2299.000000,7.000000,	0.996964,0.003036,		chr21	34733093	34733094	60.000000
chr21	34733144	34733145	rs189761243	0	+	G	G	C/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34733144	34733145	60.000000
chr21	34733155	34733156	rs13049802	0	+	C	C	C/T	genomic	single	unknown	0	0	unknown	exact	1	SingleAlleleFreq	1	SSAHASNP,	1	C,	420.000000,	1.000000,		chr21	34733155	34733156	40.000000
chr21	34733259	34733260	rs117044985	0	+	G	G	A/G	genomic	single	by-1000genomes	0.016528	0.089391	unknown	exact	1		1	1000GENOMES,	2	A,G,	3.000000,2305.000000,	0.001300,0.998700,		chr21	34733259	34733260	100.000000
chr21	34733315	34733316	rs78133704	0	+	T	T	C/T	genomic	single	by-cluster,by-frequency,by-1000genomes	0.00365	0.042562	unknown	exact	1		2	1000GENOMES,GMI,	2	C,T,	8.000000,4368.000000,	0.001828,0.998172,		chr21	34733315	34733316	40.000000
chr21	34733321	34733322	rs117494686	0	+	G	G	G/T	genomic	single	by-frequency,by-1000genomes	0.079861	0.183174	unknown	exact	1		1	1000GENOMES,	2	G,T,	2271.000000,37.000000,	0.983969,0.016031,		chr21	34733321	34733322	60.000000
chr21	34733450	34733451	rs71323368	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-1000genomes	0.5	0	unknown	exact	1		3	1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,	2	A,G,	2144.000000,48.000000,	0.978102,0.021898,		chr21	34733450	34733451	40.000000
chr21	34733526	34733527	rs181384913	0	+	A	A	A/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34733526	34733527	60.000000
chr21	34733584	34733585	rs184238170	0	+	T	T	C/T	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34733584	34733585	40.000000
chr21	34733630	34733631	rs113082116	0	+	G	G	A/G	genomic	single	unknown	0	0	unknown	exact	1	SingleAlleleFreq	1	BUSHMAN,	1	A,	1.000000,	1.000000,		chr21	34733630	34733631	80.000000
chr21	34733641	34733642	rs2298677	0	+	A	A	A/G	genomic	single	by-cluster,by-frequency,by-2hit-2allele,by-1000genomes	0.400625	0.199529	unknown	exact	1		13	1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,YUSUKE,	2	A,G,	3376.000000,1248.000000,	0.730104,0.269896,	maf-5-some-pop,maf-5-all-pops	chr21	34733641	34733642	40.000000
chr21	34733644	34733645	rs145039999	0	+	G	G	A/G	genomic	single	by-1000genomes	0	0	unknown	exact	1		1	1000GENOMES,	0					chr21	34733644	34733645	40.000000
