/* cnpSharpCutoff.h was originally generated by the autoSql program, which also 
 * generated cnpSharpCutoff.c and cnpSharpCutoff.sql.  This header links the database and
 * the RAM representation of objects. */

/* Copyright (C) 2013 The Regents of the University of California 
 * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */

#ifndef CNPSHARPCUTOFF_H
#define CNPSHARPCUTOFF_H

#ifndef JKSQL_H
#include "jksql.h"
#endif

#define CNPSHARPCUTOFF_NUM_COLS 3

struct cnpSharpCutoff
/* CNP cutoff data from Sharp lab */
    {
    struct cnpSharpCutoff *next;  /* Next in singly linked list. */
    char *sample;	/* Sample name */
    unsigned batch;	/* Batch number */
    float value;	/* Data value */
    };

void cnpSharpCutoffStaticLoad(char **row, struct cnpSharpCutoff *ret);
/* Load a row from cnpSharpCutoff table into ret.  The contents of ret will
 * be replaced at the next call to this function. */

struct cnpSharpCutoff *cnpSharpCutoffLoad(char **row);
/* Load a cnpSharpCutoff from row fetched with select * from cnpSharpCutoff
 * from database.  Dispose of this with cnpSharpCutoffFree(). */

struct cnpSharpCutoff *cnpSharpCutoffLoadAll(char *fileName);
/* Load all cnpSharpCutoff from whitespace-separated file.
 * Dispose of this with cnpSharpCutoffFreeList(). */

struct cnpSharpCutoff *cnpSharpCutoffLoadAllByChar(char *fileName, char chopper);
/* Load all cnpSharpCutoff from chopper separated file.
 * Dispose of this with cnpSharpCutoffFreeList(). */

#define cnpSharpCutoffLoadAllByTab(a) cnpSharpCutoffLoadAllByChar(a, '\t');
/* Load all cnpSharpCutoff from tab separated file.
 * Dispose of this with cnpSharpCutoffFreeList(). */

struct cnpSharpCutoff *cnpSharpCutoffLoadByQuery(struct sqlConnection *conn, char *query);
/* Load all cnpSharpCutoff from table that satisfy the query given.  
 * Where query is of the form 'select * from example where something=something'
 * or 'select example.* from example, anotherTable where example.something = 
 * anotherTable.something'.
 * Dispose of this with cnpSharpCutoffFreeList(). */

void cnpSharpCutoffSaveToDb(struct sqlConnection *conn, struct cnpSharpCutoff *el, char *tableName, int updateSize);
/* Save cnpSharpCutoff as a row to the table specified by tableName. 
 * As blob fields may be arbitrary size updateSize specifies the approx size
 * of a string that would contain the entire query. Arrays of native types are
 * converted to comma separated strings and loaded as such, User defined types are
 * inserted as NULL. Strings are automatically escaped to allow insertion into the database. */

struct cnpSharpCutoff *cnpSharpCutoffCommaIn(char **pS, struct cnpSharpCutoff *ret);
/* Create a cnpSharpCutoff out of a comma separated string. 
 * This will fill in ret if non-null, otherwise will
 * return a new cnpSharpCutoff */

void cnpSharpCutoffFree(struct cnpSharpCutoff **pEl);
/* Free a single dynamically allocated cnpSharpCutoff such as created
 * with cnpSharpCutoffLoad(). */

void cnpSharpCutoffFreeList(struct cnpSharpCutoff **pList);
/* Free a list of dynamically allocated cnpSharpCutoff's */

void cnpSharpCutoffOutput(struct cnpSharpCutoff *el, FILE *f, char sep, char lastSep);
/* Print out cnpSharpCutoff.  Separate fields with sep. Follow last field with lastSep. */

#define cnpSharpCutoffTabOut(el,f) cnpSharpCutoffOutput(el,f,'\t','\n');
/* Print out cnpSharpCutoff as a line in a tab-separated file. */

#define cnpSharpCutoffCommaOut(el,f) cnpSharpCutoffOutput(el,f,',',',');
/* Print out cnpSharpCutoff as a comma separated list including final comma. */

/* -------------------------------- End autoSql Generated Code -------------------------------- */

#endif /* CNPSHARPCUTOFF_H */

