# Assembly name: ASM2827669v1 # Organism name: Thermofilum sp. (crenarchaeotes) # Isolate: RSNP11 # Taxid: 1961369 # BioSample: SAMN32179642 # BioProject: PRJNA791658 # Submitter: Montana State University # Date: 2023-01-30 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAPYVV01 # Assembly method: SPAdes v. 3.14 # Expected final version: yes # Genome coverage: 59.82x # Sequencing technology: Illumina NovaSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_028276695.1 # RefSeq assembly accession: GCF_028276695.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_028276715.1 GCF_028276715.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1062_c1 unplaced-scaffold na na JAPYVV010000047.1 = NZ_JAPYVV010000047.1 Primary Assembly 10067 na scaffold_108_c1 unplaced-scaffold na na JAPYVV010000009.1 = NZ_JAPYVV010000009.1 Primary Assembly 46045 na scaffold_1128_c1 unplaced-scaffold na na JAPYVV010000048.1 = NZ_JAPYVV010000048.1 Primary Assembly 9451 na scaffold_112_c1 unplaced-scaffold na na JAPYVV010000010.1 = NZ_JAPYVV010000010.1 Primary Assembly 45502 na scaffold_1230_c1 unplaced-scaffold na na JAPYVV010000049.1 = NZ_JAPYVV010000049.1 Primary Assembly 8650 na scaffold_1269_c1 unplaced-scaffold na na JAPYVV010000050.1 = NZ_JAPYVV010000050.1 Primary Assembly 8439 na scaffold_1302_c1 unplaced-scaffold na na JAPYVV010000051.1 = NZ_JAPYVV010000051.1 Primary Assembly 8281 na scaffold_1313_c1 unplaced-scaffold na na JAPYVV010000052.1 = NZ_JAPYVV010000052.1 Primary Assembly 8213 na scaffold_135_c1 unplaced-scaffold na na JAPYVV010000011.1 = NZ_JAPYVV010000011.1 Primary Assembly 39705 na scaffold_1366_c1 unplaced-scaffold na na JAPYVV010000053.1 = NZ_JAPYVV010000053.1 Primary Assembly 7983 na scaffold_1377_c1 unplaced-scaffold na na JAPYVV010000054.1 = NZ_JAPYVV010000054.1 Primary Assembly 7917 na scaffold_1387_c1 unplaced-scaffold na na JAPYVV010000055.1 = NZ_JAPYVV010000055.1 Primary Assembly 7876 na scaffold_1392_c1 unplaced-scaffold na na JAPYVV010000056.1 = NZ_JAPYVV010000056.1 Primary Assembly 7845 na scaffold_1419_c1 unplaced-scaffold na na JAPYVV010000057.1 = NZ_JAPYVV010000057.1 Primary Assembly 7743 na scaffold_1444_c1 unplaced-scaffold na na JAPYVV010000058.1 = NZ_JAPYVV010000058.1 Primary Assembly 7648 na scaffold_1464_c1 unplaced-scaffold na na JAPYVV010000059.1 = NZ_JAPYVV010000059.1 Primary Assembly 7590 na scaffold_1495_c1 unplaced-scaffold na na JAPYVV010000060.1 = NZ_JAPYVV010000060.1 Primary Assembly 7447 na scaffold_1505_c1 unplaced-scaffold na na JAPYVV010000061.1 = NZ_JAPYVV010000061.1 Primary Assembly 7397 na scaffold_1516_c1 unplaced-scaffold na na JAPYVV010000062.1 = NZ_JAPYVV010000062.1 Primary Assembly 7378 na scaffold_1579_c1 unplaced-scaffold na na JAPYVV010000063.1 = NZ_JAPYVV010000063.1 Primary Assembly 7136 na scaffold_1581_c1 unplaced-scaffold na na JAPYVV010000064.1 = NZ_JAPYVV010000064.1 Primary Assembly 7130 na scaffold_159_c1 unplaced-scaffold na na JAPYVV010000014.1 = NZ_JAPYVV010000014.1 Primary Assembly 36168 na scaffold_1654_c1 unplaced-scaffold na na JAPYVV010000065.1 = NZ_JAPYVV010000065.1 Primary Assembly 6859 na scaffold_1661_c1 unplaced-scaffold na na JAPYVV010000066.1 = NZ_JAPYVV010000066.1 Primary Assembly 6839 na scaffold_1674_c1 unplaced-scaffold na na JAPYVV010000067.1 = NZ_JAPYVV010000067.1 Primary Assembly 6813 na scaffold_1691_c1 unplaced-scaffold na na JAPYVV010000068.1 = NZ_JAPYVV010000068.1 Primary Assembly 6776 na scaffold_1696_c1 unplaced-scaffold na na JAPYVV010000069.1 = NZ_JAPYVV010000069.1 Primary Assembly 6762 na scaffold_1702_c1 unplaced-scaffold na na JAPYVV010000070.1 = NZ_JAPYVV010000070.1 Primary Assembly 6748 na scaffold_170_c1 unplaced-scaffold na na JAPYVV010000015.1 = NZ_JAPYVV010000015.1 Primary Assembly 35323 na scaffold_1712_c1 unplaced-scaffold na na JAPYVV010000071.1 = NZ_JAPYVV010000071.1 Primary Assembly 6715 na scaffold_1742_c1 unplaced-scaffold na na JAPYVV010000072.1 = NZ_JAPYVV010000072.1 Primary Assembly 6635 na scaffold_1764_c1 unplaced-scaffold na na JAPYVV010000073.1 = NZ_JAPYVV010000073.1 Primary Assembly 6591 na scaffold_1770_c1 unplaced-scaffold na na JAPYVV010000074.1 = NZ_JAPYVV010000074.1 Primary Assembly 6570 na scaffold_1782_c1 unplaced-scaffold na na JAPYVV010000076.1 = NZ_JAPYVV010000076.1 Primary Assembly 6532 na scaffold_178_c1 unplaced-scaffold na na JAPYVV010000127.1 = NZ_JAPYVV010000127.1 Primary Assembly 2670 na scaffold_178_c2 unplaced-scaffold na na JAPYVV010000017.1 = NZ_JAPYVV010000017.1 Primary Assembly 31858 na scaffold_185_c1 unplaced-scaffold na na JAPYVV010000114.1 = NZ_JAPYVV010000114.1 Primary Assembly 3127 na scaffold_185_c2 unplaced-scaffold na na JAPYVV010000018.1 = NZ_JAPYVV010000018.1 Primary Assembly 30988 na scaffold_1872_c1 unplaced-scaffold na na JAPYVV010000077.1 = NZ_JAPYVV010000077.1 Primary Assembly 6201 na scaffold_1882_c1 unplaced-scaffold na na JAPYVV010000078.1 = NZ_JAPYVV010000078.1 Primary Assembly 6177 na scaffold_1942_c1 unplaced-scaffold na na JAPYVV010000079.1 = NZ_JAPYVV010000079.1 Primary Assembly 6035 na scaffold_2059_c1 unplaced-scaffold na na JAPYVV010000081.1 = NZ_JAPYVV010000081.1 Primary Assembly 5750 na scaffold_2066_c1 unplaced-scaffold na na JAPYVV010000082.1 = NZ_JAPYVV010000082.1 Primary Assembly 5724 na scaffold_2087_c1 unplaced-scaffold na na JAPYVV010000083.1 = NZ_JAPYVV010000083.1 Primary Assembly 5683 na scaffold_2096_c1 unplaced-scaffold na na JAPYVV010000084.1 = NZ_JAPYVV010000084.1 Primary Assembly 5662 na scaffold_210_c1 unplaced-scaffold na na JAPYVV010000016.1 = NZ_JAPYVV010000016.1 Primary Assembly 31927 na scaffold_2146_c1 unplaced-scaffold na na JAPYVV010000085.1 = NZ_JAPYVV010000085.1 Primary Assembly 5539 na scaffold_2286_c1 unplaced-scaffold na na JAPYVV010000086.1 = NZ_JAPYVV010000086.1 Primary Assembly 5231 na scaffold_229_c1 unplaced-scaffold na na JAPYVV010000019.1 = NZ_JAPYVV010000019.1 Primary Assembly 30281 na scaffold_2321_c1 unplaced-scaffold na na JAPYVV010000087.1 = NZ_JAPYVV010000087.1 Primary Assembly 5174 na scaffold_2322_c1 unplaced-scaffold na na JAPYVV010000088.1 = NZ_JAPYVV010000088.1 Primary Assembly 5171 na scaffold_233_c1 unplaced-scaffold na na JAPYVV010000020.1 = NZ_JAPYVV010000020.1 Primary Assembly 29661 na scaffold_2351_c1 unplaced-scaffold na na JAPYVV010000090.1 = NZ_JAPYVV010000090.1 Primary Assembly 5099 na scaffold_2352_c1 unplaced-scaffold na na JAPYVV010000089.1 = NZ_JAPYVV010000089.1 Primary Assembly 5099 na scaffold_2480_c1 unplaced-scaffold na na JAPYVV010000091.1 = NZ_JAPYVV010000091.1 Primary Assembly 4867 na scaffold_2499_c1 unplaced-scaffold na na JAPYVV010000092.1 = NZ_JAPYVV010000092.1 Primary Assembly 4840 na scaffold_262_c1 unplaced-scaffold na na JAPYVV010000021.1 = NZ_JAPYVV010000021.1 Primary Assembly 27269 na scaffold_268_c1 unplaced-scaffold na na JAPYVV010000027.1 = NZ_JAPYVV010000027.1 Primary Assembly 20695 na scaffold_268_c2 unplaced-scaffold na na JAPYVV010000080.1 = NZ_JAPYVV010000080.1 Primary Assembly 6000 na scaffold_2751_c1 unplaced-scaffold na na JAPYVV010000093.1 = NZ_JAPYVV010000093.1 Primary Assembly 4480 na scaffold_2800_c1 unplaced-scaffold na na JAPYVV010000094.1 = NZ_JAPYVV010000094.1 Primary Assembly 4430 na scaffold_2880_c1 unplaced-scaffold na na JAPYVV010000095.1 = NZ_JAPYVV010000095.1 Primary Assembly 4337 na scaffold_2950_c1 unplaced-scaffold na na JAPYVV010000096.1 = NZ_JAPYVV010000096.1 Primary Assembly 4240 na scaffold_295_c1 unplaced-scaffold na na JAPYVV010000022.1 = NZ_JAPYVV010000022.1 Primary Assembly 25196 na scaffold_29_c1 unplaced-scaffold na na JAPYVV010000003.1 = NZ_JAPYVV010000003.1 Primary Assembly 81100 na scaffold_3005_c1 unplaced-scaffold na na JAPYVV010000097.1 = NZ_JAPYVV010000097.1 Primary Assembly 4184 na scaffold_301_c1 unplaced-scaffold na na JAPYVV010000023.1 = NZ_JAPYVV010000023.1 Primary Assembly 24908 na scaffold_3033_c1 unplaced-scaffold na na JAPYVV010000098.1 = NZ_JAPYVV010000098.1 Primary Assembly 4147 na scaffold_3036_c1 unplaced-scaffold na na JAPYVV010000099.1 = NZ_JAPYVV010000099.1 Primary Assembly 4146 na scaffold_3084_c1 unplaced-scaffold na na JAPYVV010000100.1 = NZ_JAPYVV010000100.1 Primary Assembly 4097 na scaffold_3093_c1 unplaced-scaffold na na JAPYVV010000101.1 = NZ_JAPYVV010000101.1 Primary Assembly 4085 na scaffold_3142_c1 unplaced-scaffold na na JAPYVV010000102.1 = NZ_JAPYVV010000102.1 Primary Assembly 4004 na scaffold_320_c1 unplaced-scaffold na na JAPYVV010000024.1 = NZ_JAPYVV010000024.1 Primary Assembly 23576 na scaffold_3269_c1 unplaced-scaffold na na JAPYVV010000103.1 = NZ_JAPYVV010000103.1 Primary Assembly 3862 na scaffold_3286_c1 unplaced-scaffold na na JAPYVV010000104.1 = NZ_JAPYVV010000104.1 Primary Assembly 3848 na scaffold_331_c1 unplaced-scaffold na na JAPYVV010000025.1 = NZ_JAPYVV010000025.1 Primary Assembly 23103 na scaffold_3397_c1 unplaced-scaffold na na JAPYVV010000105.1 = NZ_JAPYVV010000105.1 Primary Assembly 3729 na scaffold_3419_c1 unplaced-scaffold na na JAPYVV010000106.1 = NZ_JAPYVV010000106.1 Primary Assembly 3708 na scaffold_3475_c1 unplaced-scaffold na na JAPYVV010000107.1 = NZ_JAPYVV010000107.1 Primary Assembly 3664 na scaffold_347_c1 unplaced-scaffold na na JAPYVV010000026.1 = NZ_JAPYVV010000026.1 Primary Assembly 22295 na scaffold_34_c1 unplaced-scaffold na na JAPYVV010000004.1 = NZ_JAPYVV010000004.1 Primary Assembly 77027 na scaffold_3675_c1 unplaced-scaffold na na JAPYVV010000108.1 = NZ_JAPYVV010000108.1 Primary Assembly 3515 na scaffold_37_c1 unplaced-scaffold na na JAPYVV010000013.1 = NZ_JAPYVV010000013.1 Primary Assembly 37197 na scaffold_37_c2 unplaced-scaffold na na JAPYVV010000012.1 = NZ_JAPYVV010000012.1 Primary Assembly 37523 na scaffold_3994_c1 unplaced-scaffold na na JAPYVV010000109.1 = NZ_JAPYVV010000109.1 Primary Assembly 3285 na scaffold_399_c1 unplaced-scaffold na na JAPYVV010000028.1 = NZ_JAPYVV010000028.1 Primary Assembly 20416 na scaffold_4009_c1 unplaced-scaffold na na JAPYVV010000110.1 = NZ_JAPYVV010000110.1 Primary Assembly 3273 na scaffold_4050_c1 unplaced-scaffold na na JAPYVV010000111.1 = NZ_JAPYVV010000111.1 Primary Assembly 3239 na scaffold_407_c1 unplaced-scaffold na na JAPYVV010000075.1 = NZ_JAPYVV010000075.1 Primary Assembly 6568 na scaffold_407_c2 unplaced-scaffold na na JAPYVV010000039.1 = NZ_JAPYVV010000039.1 Primary Assembly 13464 na scaffold_4141_c1 unplaced-scaffold na na JAPYVV010000112.1 = NZ_JAPYVV010000112.1 Primary Assembly 3175 na scaffold_4166_c1 unplaced-scaffold na na JAPYVV010000113.1 = NZ_JAPYVV010000113.1 Primary Assembly 3158 na scaffold_418_c1 unplaced-scaffold na na JAPYVV010000029.1 = NZ_JAPYVV010000029.1 Primary Assembly 19750 na scaffold_4304_c1 unplaced-scaffold na na JAPYVV010000115.1 = NZ_JAPYVV010000115.1 Primary Assembly 3066 na scaffold_4339_c1 unplaced-scaffold na na JAPYVV010000116.1 = NZ_JAPYVV010000116.1 Primary Assembly 3037 na scaffold_4364_c1 unplaced-scaffold na na JAPYVV010000117.1 = NZ_JAPYVV010000117.1 Primary Assembly 3023 na scaffold_4382_c1 unplaced-scaffold na na JAPYVV010000118.1 = NZ_JAPYVV010000118.1 Primary Assembly 3010 na scaffold_43_c1 unplaced-scaffold na na JAPYVV010000005.1 = NZ_JAPYVV010000005.1 Primary Assembly 69010 na scaffold_4422_c1 unplaced-scaffold na na JAPYVV010000119.1 = NZ_JAPYVV010000119.1 Primary Assembly 2985 na scaffold_4436_c1 unplaced-scaffold na na JAPYVV010000120.1 = NZ_JAPYVV010000120.1 Primary Assembly 2977 na scaffold_4583_c1 unplaced-scaffold na na JAPYVV010000121.1 = NZ_JAPYVV010000121.1 Primary Assembly 2897 na scaffold_4717_c1 unplaced-scaffold na na JAPYVV010000122.1 = NZ_JAPYVV010000122.1 Primary Assembly 2824 na scaffold_473_c1 unplaced-scaffold na na JAPYVV010000030.1 = NZ_JAPYVV010000030.1 Primary Assembly 18439 na scaffold_4740_c1 unplaced-scaffold na na JAPYVV010000123.1 = NZ_JAPYVV010000123.1 Primary Assembly 2813 na scaffold_4830_c1 unplaced-scaffold na na JAPYVV010000124.1 = NZ_JAPYVV010000124.1 Primary Assembly 2770 na scaffold_492_c1 unplaced-scaffold na na JAPYVV010000031.1 = NZ_JAPYVV010000031.1 Primary Assembly 17745 na scaffold_4972_c1 unplaced-scaffold na na JAPYVV010000125.1 = NZ_JAPYVV010000125.1 Primary Assembly 2699 na scaffold_4977_c1 unplaced-scaffold na na JAPYVV010000126.1 = NZ_JAPYVV010000126.1 Primary Assembly 2695 na scaffold_518_c1 unplaced-scaffold na na JAPYVV010000032.1 = NZ_JAPYVV010000032.1 Primary Assembly 17275 na scaffold_521_c1 unplaced-scaffold na na JAPYVV010000037.1 = NZ_JAPYVV010000037.1 Primary Assembly 14511 na scaffold_521_c2 unplaced-scaffold na na JAPYVV010000128.1 = NZ_JAPYVV010000128.1 Primary Assembly 2585 na scaffold_52_c1 unplaced-scaffold na na JAPYVV010000006.1 = NZ_JAPYVV010000006.1 Primary Assembly 65669 na scaffold_5327_c1 unplaced-scaffold na na JAPYVV010000129.1 = NZ_JAPYVV010000129.1 Primary Assembly 2532 na scaffold_5352_c1 unplaced-scaffold na na JAPYVV010000131.1 = NZ_JAPYVV010000131.1 Primary Assembly 2517 na scaffold_5353_c1 unplaced-scaffold na na JAPYVV010000130.1 = NZ_JAPYVV010000130.1 Primary Assembly 2517 na scaffold_53_c1 unplaced-scaffold na na JAPYVV010000007.1 = NZ_JAPYVV010000007.1 Primary Assembly 63652 na scaffold_562_c1 unplaced-scaffold na na JAPYVV010000033.1 = NZ_JAPYVV010000033.1 Primary Assembly 16212 na scaffold_605_c1 unplaced-scaffold na na JAPYVV010000034.1 = NZ_JAPYVV010000034.1 Primary Assembly 15371 na scaffold_616_c1 unplaced-scaffold na na JAPYVV010000035.1 = NZ_JAPYVV010000035.1 Primary Assembly 15161 na scaffold_647_c1 unplaced-scaffold na na JAPYVV010000036.1 = NZ_JAPYVV010000036.1 Primary Assembly 14651 na scaffold_653_c1 unplaced-scaffold na na JAPYVV010000038.1 = NZ_JAPYVV010000038.1 Primary Assembly 14454 na scaffold_67_c1 unplaced-scaffold na na JAPYVV010000008.1 = NZ_JAPYVV010000008.1 Primary Assembly 55124 na scaffold_6_c1 unplaced-scaffold na na JAPYVV010000001.1 = NZ_JAPYVV010000001.1 Primary Assembly 144492 na scaffold_742_c1 unplaced-scaffold na na JAPYVV010000040.1 = NZ_JAPYVV010000040.1 Primary Assembly 13146 na scaffold_780_c1 unplaced-scaffold na na JAPYVV010000041.1 = NZ_JAPYVV010000041.1 Primary Assembly 12688 na scaffold_794_c1 unplaced-scaffold na na JAPYVV010000042.1 = NZ_JAPYVV010000042.1 Primary Assembly 12527 na scaffold_7_c1 unplaced-scaffold na na JAPYVV010000002.1 = NZ_JAPYVV010000002.1 Primary Assembly 137221 na scaffold_840_c1 unplaced-scaffold na na JAPYVV010000043.1 = NZ_JAPYVV010000043.1 Primary Assembly 11996 na scaffold_859_c1 unplaced-scaffold na na JAPYVV010000044.1 = NZ_JAPYVV010000044.1 Primary Assembly 11842 na scaffold_934_c1 unplaced-scaffold na na JAPYVV010000045.1 = NZ_JAPYVV010000045.1 Primary Assembly 11059 na scaffold_996_c1 unplaced-scaffold na na JAPYVV010000046.1 = NZ_JAPYVV010000046.1 Primary Assembly 10444 na