# Assembly name: ASM5211720v1 # Organism name: Candidatus Agathobaculum pullicola (firmicutes) # Infraspecific name: strain=LCP25S3_E6 # Taxid: 2838426 # BioSample: SAMN48950862 # BioProject: PRJNA1273087 # Submitter: Quadram Institute Bioscience # Date: 2025-08-18 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBQKJP01 # Assembly method: SPAdes v. 3.14 # Expected final version: yes # Genome coverage: 10-100x # Sequencing technology: Illumina NextSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_052117205.1 # RefSeq assembly accession: GCF_052117205.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_052117215.1 GCF_052117215.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00001 unplaced-scaffold na na JBQKJP010000001.1 = NZ_JBQKJP010000001.1 Primary Assembly 181080 na contig00002 unplaced-scaffold na na JBQKJP010000002.1 = NZ_JBQKJP010000002.1 Primary Assembly 176324 na contig00003 unplaced-scaffold na na JBQKJP010000003.1 = NZ_JBQKJP010000003.1 Primary Assembly 146406 na contig00004 unplaced-scaffold na na JBQKJP010000004.1 = NZ_JBQKJP010000004.1 Primary Assembly 117710 na contig00005 unplaced-scaffold na na JBQKJP010000005.1 = NZ_JBQKJP010000005.1 Primary Assembly 101913 na contig00006 unplaced-scaffold na na JBQKJP010000006.1 = NZ_JBQKJP010000006.1 Primary Assembly 98871 na contig00007 unplaced-scaffold na na JBQKJP010000007.1 = NZ_JBQKJP010000007.1 Primary Assembly 97666 na contig00008 unplaced-scaffold na na JBQKJP010000008.1 = NZ_JBQKJP010000008.1 Primary Assembly 75945 na contig00009 unplaced-scaffold na na JBQKJP010000009.1 = NZ_JBQKJP010000009.1 Primary Assembly 75472 na contig00010 unplaced-scaffold na na JBQKJP010000010.1 = NZ_JBQKJP010000010.1 Primary Assembly 73102 na contig00011 unplaced-scaffold na na JBQKJP010000011.1 = NZ_JBQKJP010000011.1 Primary Assembly 69211 na contig00012 unplaced-scaffold na na JBQKJP010000012.1 = NZ_JBQKJP010000012.1 Primary Assembly 60423 na contig00013 unplaced-scaffold na na JBQKJP010000013.1 = NZ_JBQKJP010000013.1 Primary Assembly 59806 na contig00014 unplaced-scaffold na na JBQKJP010000014.1 = NZ_JBQKJP010000014.1 Primary Assembly 57739 na contig00015 unplaced-scaffold na na JBQKJP010000015.1 = NZ_JBQKJP010000015.1 Primary Assembly 56239 na contig00016 unplaced-scaffold na na JBQKJP010000016.1 = NZ_JBQKJP010000016.1 Primary Assembly 54074 na contig00017 unplaced-scaffold na na JBQKJP010000017.1 = NZ_JBQKJP010000017.1 Primary Assembly 52844 na contig00018 unplaced-scaffold na na JBQKJP010000018.1 = NZ_JBQKJP010000018.1 Primary Assembly 49563 na contig00019 unplaced-scaffold na na JBQKJP010000019.1 = NZ_JBQKJP010000019.1 Primary Assembly 47214 na contig00020 unplaced-scaffold na na JBQKJP010000020.1 = NZ_JBQKJP010000020.1 Primary Assembly 45560 na contig00021 unplaced-scaffold na na JBQKJP010000021.1 = NZ_JBQKJP010000021.1 Primary Assembly 44641 na contig00022 unplaced-scaffold na na JBQKJP010000022.1 = NZ_JBQKJP010000022.1 Primary Assembly 42282 na contig00023 unplaced-scaffold na na JBQKJP010000023.1 = NZ_JBQKJP010000023.1 Primary Assembly 40066 na contig00024 unplaced-scaffold na na JBQKJP010000024.1 = NZ_JBQKJP010000024.1 Primary Assembly 39628 na contig00025 unplaced-scaffold na na JBQKJP010000025.1 = NZ_JBQKJP010000025.1 Primary Assembly 38412 na contig00026 unplaced-scaffold na na JBQKJP010000026.1 = NZ_JBQKJP010000026.1 Primary Assembly 38395 na contig00027 unplaced-scaffold na na JBQKJP010000027.1 = NZ_JBQKJP010000027.1 Primary Assembly 38142 na contig00028 unplaced-scaffold na na JBQKJP010000028.1 = NZ_JBQKJP010000028.1 Primary Assembly 36997 na contig00029 unplaced-scaffold na na JBQKJP010000029.1 = NZ_JBQKJP010000029.1 Primary Assembly 36299 na contig00030 unplaced-scaffold na na JBQKJP010000030.1 = NZ_JBQKJP010000030.1 Primary Assembly 36026 na contig00031 unplaced-scaffold na na JBQKJP010000031.1 = NZ_JBQKJP010000031.1 Primary Assembly 35882 na contig00032 unplaced-scaffold na na JBQKJP010000032.1 = NZ_JBQKJP010000032.1 Primary Assembly 35185 na contig00033 unplaced-scaffold na na JBQKJP010000033.1 = NZ_JBQKJP010000033.1 Primary Assembly 34029 na contig00034 unplaced-scaffold na na JBQKJP010000034.1 = NZ_JBQKJP010000034.1 Primary Assembly 33962 na contig00035 unplaced-scaffold na na JBQKJP010000035.1 = NZ_JBQKJP010000035.1 Primary Assembly 32221 na contig00036 unplaced-scaffold na na JBQKJP010000036.1 = NZ_JBQKJP010000036.1 Primary Assembly 30422 na contig00037 unplaced-scaffold na na JBQKJP010000037.1 = NZ_JBQKJP010000037.1 Primary Assembly 30245 na contig00038 unplaced-scaffold na na JBQKJP010000038.1 = NZ_JBQKJP010000038.1 Primary Assembly 30135 na contig00039 unplaced-scaffold na na JBQKJP010000039.1 = NZ_JBQKJP010000039.1 Primary Assembly 28682 na contig00040 unplaced-scaffold na na JBQKJP010000040.1 = NZ_JBQKJP010000040.1 Primary Assembly 27202 na contig00041 unplaced-scaffold na na JBQKJP010000041.1 = NZ_JBQKJP010000041.1 Primary Assembly 25425 na contig00042 unplaced-scaffold na na JBQKJP010000042.1 = NZ_JBQKJP010000042.1 Primary Assembly 24234 na contig00043 unplaced-scaffold na na JBQKJP010000043.1 = NZ_JBQKJP010000043.1 Primary Assembly 23759 na contig00044 unplaced-scaffold na na JBQKJP010000044.1 = NZ_JBQKJP010000044.1 Primary Assembly 23259 na contig00045 unplaced-scaffold na na JBQKJP010000045.1 = NZ_JBQKJP010000045.1 Primary Assembly 23103 na contig00046 unplaced-scaffold na na JBQKJP010000046.1 = NZ_JBQKJP010000046.1 Primary Assembly 23046 na contig00047 unplaced-scaffold na na JBQKJP010000047.1 = NZ_JBQKJP010000047.1 Primary Assembly 22707 na contig00048 unplaced-scaffold na na JBQKJP010000048.1 = NZ_JBQKJP010000048.1 Primary Assembly 22640 na contig00049 unplaced-scaffold na na JBQKJP010000049.1 = NZ_JBQKJP010000049.1 Primary Assembly 22170 na contig00050 unplaced-scaffold na na JBQKJP010000050.1 = NZ_JBQKJP010000050.1 Primary Assembly 20693 na contig00051 unplaced-scaffold na na JBQKJP010000051.1 = NZ_JBQKJP010000051.1 Primary Assembly 17156 na contig00052 unplaced-scaffold na na JBQKJP010000052.1 = NZ_JBQKJP010000052.1 Primary Assembly 17125 na contig00053 unplaced-scaffold na na JBQKJP010000053.1 = NZ_JBQKJP010000053.1 Primary Assembly 16980 na contig00054 unplaced-scaffold na na JBQKJP010000054.1 = NZ_JBQKJP010000054.1 Primary Assembly 16845 na contig00055 unplaced-scaffold na na JBQKJP010000055.1 = NZ_JBQKJP010000055.1 Primary Assembly 15871 na contig00056 unplaced-scaffold na na JBQKJP010000056.1 = NZ_JBQKJP010000056.1 Primary Assembly 15648 na contig00057 unplaced-scaffold na na JBQKJP010000057.1 = NZ_JBQKJP010000057.1 Primary Assembly 15587 na contig00058 unplaced-scaffold na na JBQKJP010000058.1 = NZ_JBQKJP010000058.1 Primary Assembly 15423 na contig00059 unplaced-scaffold na na JBQKJP010000059.1 = NZ_JBQKJP010000059.1 Primary Assembly 14841 na contig00060 unplaced-scaffold na na JBQKJP010000060.1 = NZ_JBQKJP010000060.1 Primary Assembly 13252 na contig00061 unplaced-scaffold na na JBQKJP010000061.1 = NZ_JBQKJP010000061.1 Primary Assembly 12407 na contig00062 unplaced-scaffold na na JBQKJP010000062.1 = NZ_JBQKJP010000062.1 Primary Assembly 12258 na contig00063 unplaced-scaffold na na JBQKJP010000063.1 = NZ_JBQKJP010000063.1 Primary Assembly 12052 na contig00064 unplaced-scaffold na na JBQKJP010000064.1 = NZ_JBQKJP010000064.1 Primary Assembly 11008 na contig00065 unplaced-scaffold na na JBQKJP010000065.1 = NZ_JBQKJP010000065.1 Primary Assembly 10475 na contig00066 unplaced-scaffold na na JBQKJP010000066.1 = NZ_JBQKJP010000066.1 Primary Assembly 10442 na contig00067 unplaced-scaffold na na JBQKJP010000067.1 = NZ_JBQKJP010000067.1 Primary Assembly 10136 na contig00068 unplaced-scaffold na na JBQKJP010000068.1 = NZ_JBQKJP010000068.1 Primary Assembly 9772 na contig00069 unplaced-scaffold na na JBQKJP010000069.1 = NZ_JBQKJP010000069.1 Primary Assembly 8915 na contig00070 unplaced-scaffold na na JBQKJP010000070.1 = NZ_JBQKJP010000070.1 Primary Assembly 8493 na contig00071 unplaced-scaffold na na JBQKJP010000071.1 = NZ_JBQKJP010000071.1 Primary Assembly 7525 na contig00072 unplaced-scaffold na na JBQKJP010000072.1 = NZ_JBQKJP010000072.1 Primary Assembly 6940 na contig00073 unplaced-scaffold na na JBQKJP010000073.1 = NZ_JBQKJP010000073.1 Primary Assembly 6802 na contig00074 unplaced-scaffold na na JBQKJP010000074.1 = NZ_JBQKJP010000074.1 Primary Assembly 6653 na contig00075 unplaced-scaffold na na JBQKJP010000075.1 = NZ_JBQKJP010000075.1 Primary Assembly 6638 na contig00076 unplaced-scaffold na na JBQKJP010000076.1 = NZ_JBQKJP010000076.1 Primary Assembly 6477 na contig00077 unplaced-scaffold na na JBQKJP010000077.1 = NZ_JBQKJP010000077.1 Primary Assembly 6234 na contig00078 unplaced-scaffold na na JBQKJP010000078.1 = NZ_JBQKJP010000078.1 Primary Assembly 5121 na contig00079 unplaced-scaffold na na JBQKJP010000079.1 = NZ_JBQKJP010000079.1 Primary Assembly 5063 na contig00080 unplaced-scaffold na na JBQKJP010000080.1 = NZ_JBQKJP010000080.1 Primary Assembly 3645 na contig00081 unplaced-scaffold na na JBQKJP010000081.1 = NZ_JBQKJP010000081.1 Primary Assembly 3571 na contig00082 unplaced-scaffold na na JBQKJP010000082.1 = NZ_JBQKJP010000082.1 Primary Assembly 3554 na contig00083 unplaced-scaffold na na JBQKJP010000083.1 = NZ_JBQKJP010000083.1 Primary Assembly 3407 na contig00084 unplaced-scaffold na na JBQKJP010000084.1 = NZ_JBQKJP010000084.1 Primary Assembly 3241 na contig00085 unplaced-scaffold na na JBQKJP010000085.1 = NZ_JBQKJP010000085.1 Primary Assembly 2690 na contig00086 unplaced-scaffold na na JBQKJP010000086.1 = NZ_JBQKJP010000086.1 Primary Assembly 2594 na contig00087 unplaced-scaffold na na JBQKJP010000087.1 = NZ_JBQKJP010000087.1 Primary Assembly 2488 na contig00088 unplaced-scaffold na na JBQKJP010000088.1 = NZ_JBQKJP010000088.1 Primary Assembly 2298 na contig00089 unplaced-scaffold na na JBQKJP010000089.1 = NZ_JBQKJP010000089.1 Primary Assembly 2279 na contig00090 unplaced-scaffold na na JBQKJP010000090.1 = NZ_JBQKJP010000090.1 Primary Assembly 2217 na contig00091 unplaced-scaffold na na JBQKJP010000091.1 = NZ_JBQKJP010000091.1 Primary Assembly 2155 na contig00092 unplaced-scaffold na na JBQKJP010000092.1 = NZ_JBQKJP010000092.1 Primary Assembly 2110 na contig00093 unplaced-scaffold na na JBQKJP010000093.1 = NZ_JBQKJP010000093.1 Primary Assembly 1928 na contig00094 unplaced-scaffold na na JBQKJP010000094.1 = NZ_JBQKJP010000094.1 Primary Assembly 1856 na contig00095 unplaced-scaffold na na JBQKJP010000095.1 = NZ_JBQKJP010000095.1 Primary Assembly 1644 na contig00096 unplaced-scaffold na na JBQKJP010000096.1 = NZ_JBQKJP010000096.1 Primary Assembly 1593 na contig00097 unplaced-scaffold na na JBQKJP010000097.1 = NZ_JBQKJP010000097.1 Primary Assembly 1494 na contig00098 unplaced-scaffold na na JBQKJP010000098.1 = NZ_JBQKJP010000098.1 Primary Assembly 1463 na contig00099 unplaced-scaffold na na JBQKJP010000099.1 = NZ_JBQKJP010000099.1 Primary Assembly 1406 na contig00100 unplaced-scaffold na na JBQKJP010000100.1 = NZ_JBQKJP010000100.1 Primary Assembly 1286 na contig00101 unplaced-scaffold na na JBQKJP010000101.1 = NZ_JBQKJP010000101.1 Primary Assembly 1246 na contig00102 unplaced-scaffold na na JBQKJP010000102.1 = NZ_JBQKJP010000102.1 Primary Assembly 1158 na contig00103 unplaced-scaffold na na JBQKJP010000103.1 = NZ_JBQKJP010000103.1 Primary Assembly 1139 na contig00104 unplaced-scaffold na na JBQKJP010000104.1 = NZ_JBQKJP010000104.1 Primary Assembly 1138 na contig00105 unplaced-scaffold na na JBQKJP010000105.1 = NZ_JBQKJP010000105.1 Primary Assembly 1135 na contig00106 unplaced-scaffold na na JBQKJP010000106.1 = NZ_JBQKJP010000106.1 Primary Assembly 1133 na contig00107 unplaced-scaffold na na JBQKJP010000107.1 = NZ_JBQKJP010000107.1 Primary Assembly 1120 na contig00108 unplaced-scaffold na na JBQKJP010000108.1 = NZ_JBQKJP010000108.1 Primary Assembly 1091 na contig00109 unplaced-scaffold na na JBQKJP010000109.1 = NZ_JBQKJP010000109.1 Primary Assembly 1077 na contig00110 unplaced-scaffold na na JBQKJP010000110.1 = NZ_JBQKJP010000110.1 Primary Assembly 1021 na contig00111 unplaced-scaffold na na JBQKJP010000111.1 = NZ_JBQKJP010000111.1 Primary Assembly 940 na contig00112 unplaced-scaffold na na JBQKJP010000112.1 = NZ_JBQKJP010000112.1 Primary Assembly 939 na contig00113 unplaced-scaffold na na JBQKJP010000113.1 = NZ_JBQKJP010000113.1 Primary Assembly 820 na contig00114 unplaced-scaffold na na JBQKJP010000114.1 = NZ_JBQKJP010000114.1 Primary Assembly 799 na contig00115 unplaced-scaffold na na JBQKJP010000115.1 = NZ_JBQKJP010000115.1 Primary Assembly 781 na contig00116 unplaced-scaffold na na JBQKJP010000116.1 = NZ_JBQKJP010000116.1 Primary Assembly 778 na contig00117 unplaced-scaffold na na JBQKJP010000117.1 = NZ_JBQKJP010000117.1 Primary Assembly 750 na contig00118 unplaced-scaffold na na JBQKJP010000118.1 = NZ_JBQKJP010000118.1 Primary Assembly 699 na contig00119 unplaced-scaffold na na JBQKJP010000119.1 = NZ_JBQKJP010000119.1 Primary Assembly 693 na contig00120 unplaced-scaffold na na JBQKJP010000120.1 = NZ_JBQKJP010000120.1 Primary Assembly 648 na contig00121 unplaced-scaffold na na JBQKJP010000121.1 = NZ_JBQKJP010000121.1 Primary Assembly 622 na contig00122 unplaced-scaffold na na JBQKJP010000122.1 = NZ_JBQKJP010000122.1 Primary Assembly 617 na contig00123 unplaced-scaffold na na JBQKJP010000123.1 = NZ_JBQKJP010000123.1 Primary Assembly 600 na contig00124 unplaced-scaffold na na JBQKJP010000124.1 = NZ_JBQKJP010000124.1 Primary Assembly 556 na contig00125 unplaced-scaffold na na JBQKJP010000125.1 = NZ_JBQKJP010000125.1 Primary Assembly 544 na contig00126 unplaced-scaffold na na JBQKJP010000126.1 = NZ_JBQKJP010000126.1 Primary Assembly 463 na contig00127 unplaced-scaffold na na JBQKJP010000127.1 = NZ_JBQKJP010000127.1 Primary Assembly 461 na contig00128 unplaced-scaffold na na JBQKJP010000128.1 = NZ_JBQKJP010000128.1 Primary Assembly 426 na contig00129 unplaced-scaffold na na JBQKJP010000129.1 = NZ_JBQKJP010000129.1 Primary Assembly 424 na contig00130 unplaced-scaffold na na JBQKJP010000130.1 = NZ_JBQKJP010000130.1 Primary Assembly 414 na contig00131 unplaced-scaffold na na JBQKJP010000131.1 = NZ_JBQKJP010000131.1 Primary Assembly 411 na contig00132 unplaced-scaffold na na JBQKJP010000132.1 = NZ_JBQKJP010000132.1 Primary Assembly 395 na contig00133 unplaced-scaffold na na JBQKJP010000133.1 = NZ_JBQKJP010000133.1 Primary Assembly 385 na contig00134 unplaced-scaffold na na JBQKJP010000134.1 = NZ_JBQKJP010000134.1 Primary Assembly 385 na contig00135 unplaced-scaffold na na JBQKJP010000135.1 = NZ_JBQKJP010000135.1 Primary Assembly 384 na contig00136 unplaced-scaffold na na JBQKJP010000136.1 = NZ_JBQKJP010000136.1 Primary Assembly 374 na contig00137 unplaced-scaffold na na JBQKJP010000137.1 = NZ_JBQKJP010000137.1 Primary Assembly 360 na contig00138 unplaced-scaffold na na JBQKJP010000138.1 = NZ_JBQKJP010000138.1 Primary Assembly 348 na