This directory contains reciprocal-best netted chains for calJac4-rheMac10.

 - calJac4.rheMac10.rbest.net.gz: calJac4-referenced recip.best net to rheMac10.
 - calJac4.rheMac10.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from calJac4 to rheMac10 through the recip.best net.

 - rheMac10.calJac4.rbest.net.gz: rheMac10-referenced recip.best net.
 - rheMac10.calJac4.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/calJac4.rheMac10.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                            Last modified      Size  Description
      Parent Directory                                     -   
      axtRBestNet/                    2022-03-09 16:56    -   
      md5sum.txt                      2022-01-05 05:36  260   
      calJac4.rheMac10.rbest.chain.gz 2022-01-05 05:35   50M  
      rheMac10.calJac4.rbest.chain.gz 2022-01-05 05:34   50M  
      calJac4.rheMac10.rbest.net.gz   2022-01-05 05:36   77M  
      rheMac10.calJac4.rbest.net.gz   2022-01-05 05:34   98M