This directory contains reciprocal-best netted chains for canFam6-hg38.
- canFam6.hg38.rbest.net.gz: canFam6-referenced recip.best net to hg38.
- canFam6.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from canFam6 to hg38 through the recip.best net.
- hg38.canFam6.rbest.net.gz: hg38-referenced recip.best net.
- hg38.canFam6.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/canFam6.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2021-11-22 16:43 -
md5sum.txt 2021-05-18 19:53 244
canFam6.hg38.rbest.chain.gz 2021-05-18 19:51 81M
hg38.canFam6.rbest.chain.gz 2021-05-18 19:50 81M
canFam6.hg38.rbest.net.gz 2021-05-18 19:53 134M
hg38.canFam6.rbest.net.gz 2021-05-18 19:49 149M