This directory contains reciprocal-best netted chains for danRer10-hg19.
- danRer10.hg19.rbest.net.gz: danRer10-referenced recip.best net to hg19.
- danRer10.hg19.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from danRer10 to hg19 through the recip.best net.
- hg19.danRer10.rbest.net.gz: hg19-referenced recip.best net.
- hg19.danRer10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/danRer10.hg19.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2015-09-25 13:03 -
danRer10.hg19.rbest.chain.gz 2015-09-25 12:55 6.0M
danRer10.hg19.rbest.net.gz 2015-09-25 12:55 10M
hg19.danRer10.rbest.chain.gz 2015-09-25 12:55 6.0M
hg19.danRer10.rbest.net.gz 2015-09-25 12:55 11M
md5sum.txt 2015-09-25 12:55 248