This directory contains reciprocal-best netted chains for felCat9-mm10.
- felCat9.mm10.rbest.net.gz: felCat9-referenced recip.best net to mm10.
- felCat9.mm10.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from felCat9 to mm10 through the recip.best net.
- mm10.felCat9.rbest.net.gz: mm10-referenced recip.best net.
- mm10.felCat9.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/felCat9.mm10.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2019-04-26 09:13 -
felCat9.mm10.rbest.chain.gz 2018-03-15 21:11 57M
felCat9.mm10.rbest.net.gz 2018-03-15 21:13 119M
md5sum.txt 2018-03-15 21:13 244
mm10.felCat9.rbest.chain.gz 2018-03-15 21:10 57M
mm10.felCat9.rbest.net.gz 2018-03-15 21:09 84M