This directory contains reciprocal-best netted chains for galGal5-pelSin1.

 - galGal5.pelSin1.rbest.net.gz: galGal5-referenced recip.best net to pelSin1.
 - galGal5.pelSin1.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from galGal5 to pelSin1 through the recip.best net.

 - pelSin1.galGal5.rbest.net.gz: pelSin1-referenced recip.best net.
 - pelSin1.galGal5.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/galGal5.pelSin1.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      axtRBestNet/                   2016-05-11 14:42    -   
      md5sum.txt                     2016-05-11 13:35  256   
      galGal5.pelSin1.rbest.chain.gz 2016-05-11 13:35   18M  
      pelSin1.galGal5.rbest.chain.gz 2016-05-11 13:34   18M  
      galGal5.pelSin1.rbest.net.gz   2016-05-11 13:35   31M  
      pelSin1.galGal5.rbest.net.gz   2016-05-11 13:34   36M