This directory contains reciprocal-best netted chains for galGal6-danRer11.

 - galGal6.danRer11.rbest.net.gz: galGal6-referenced recip.best net to danRer11.
 - galGal6.danRer11.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from galGal6 to danRer11 through the recip.best net.

 - danRer11.galGal6.rbest.net.gz: danRer11-referenced recip.best net.
 - danRer11.galGal6.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/galGal6.danRer11.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                            Last modified      Size  Description
      Parent Directory                                     -   
      axtRBestNet/                    2018-10-17 14:39    -   
      md5sum.txt                      2018-10-17 11:39  260   
      galGal6.danRer11.rbest.net.gz   2018-10-17 11:39  9.4M  
      galGal6.danRer11.rbest.chain.gz 2018-10-17 11:39  5.7M  
      danRer11.galGal6.rbest.chain.gz 2018-10-17 11:39  5.7M  
      danRer11.galGal6.rbest.net.gz   2018-10-17 11:39  9.5M