This directory contains reciprocal-best netted chains for geoFor1-galGal6. - geoFor1.galGal6.rbest.net.gz: geoFor1-referenced recip.best net to galGal6. - geoFor1.galGal6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from geoFor1 to galGal6 through the recip.best net. - galGal6.geoFor1.rbest.net.gz: galGal6-referenced recip.best net. - galGal6.geoFor1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/geoFor1.galGal6.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-26 06:35 - galGal6.geoFor1.rbest.chain.gz 2018-10-25 22:54 45M galGal6.geoFor1.rbest.net.gz 2018-10-25 22:53 78M geoFor1.galGal6.rbest.chain.gz 2018-10-25 22:55 45M geoFor1.galGal6.rbest.net.gz 2018-10-25 22:56 76M md5sum.txt 2018-10-25 22:56 256