This directory contains reciprocal-best netted chains for geoFor1-melGal5. - geoFor1.melGal5.rbest.net.gz: geoFor1-referenced recip.best net to melGal5. - geoFor1.melGal5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from geoFor1 to melGal5 through the recip.best net. - melGal5.geoFor1.rbest.net.gz: melGal5-referenced recip.best net. - melGal5.geoFor1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/geoFor1.melGal5.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-01-26 20:39 - geoFor1.melGal5.rbest.chain.gz 2017-01-26 15:50 42M geoFor1.melGal5.rbest.net.gz 2017-01-26 15:51 74M md5sum.txt 2017-01-26 15:51 256 melGal5.geoFor1.rbest.chain.gz 2017-01-26 15:50 42M melGal5.geoFor1.rbest.net.gz 2017-01-26 15:49 72M