This directory contains reciprocal-best netted chains for hg38-eulFla1.
- hg38.eulFla1.rbest.net.gz: hg38-referenced recip.best net to eulFla1.
- hg38.eulFla1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to eulFla1 through the recip.best net.
- eulFla1.hg38.rbest.net.gz: eulFla1-referenced recip.best net.
- eulFla1.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.eulFla1.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-10-05 14:41 -
md5sum.txt 2017-10-05 11:11 244
hg38.eulFla1.rbest.chain.gz 2017-10-05 11:10 38M
eulFla1.hg38.rbest.chain.gz 2017-10-05 11:09 38M
eulFla1.hg38.rbest.net.gz 2017-10-05 11:09 74M
hg38.eulFla1.rbest.net.gz 2017-10-05 11:11 75M