This directory contains the April 1, 2001 GenBank freeze
ordered and oriented according to the corresponding
fingerprint map and genome layout from Wash. U., taking into account overlap
between fragments and bridging mRNA, EST, plasmid and BAC
end pairs. Chromosomes 20, 21 and 22 are the finished versions
as obtained from NCBI. This directory includes the following
files:
contigFa.zip - The working draft sequence one file per
fingerprint contig (clone layout) in Fasta format. Unpacks
with one directory for each chromosome and one subdirectory for each
fingerprint contig.
contigFaMasked.zip - RepeatMasked version of contigFa.zip (with
N's in place of repeating elements.)
contigAgp.zip - Description of how the working draft was generated from
fragments at a contig layout level.
chromFa.zip - Similar to contigFa.zip, but it unpacks to one file per
chromosome.
chromFaMasked.zip - RepeatMasked version of chromFa.zip
chromAgp.zip - Similar to contigAGP.zip, but it unpacks to one file per
chromosome.
Name Last modified Size Description
Parent Directory -
chromAgp.zip 2001-06-12 23:34 4.0M
chromFa.zip 2001-06-12 23:19 812M
chromFaMasked.zip 2001-06-12 23:30 512M
chromOut.zip 2001-06-12 23:35 124M
contigAgp.zip 2001-06-13 14:08 4.0M
contigFa.zip 2001-06-12 23:26 811M
contigFaMasked.zip 2001-06-12 23:34 510M
contigOut.zip 2001-06-12 23:36 124M
database.zip 2001-10-13 14:48 1.2G
liftAll.zip 2001-06-12 23:36 9.5K