This directory contains reciprocal-best netted chains for melGal5-galGal6.
- melGal5.galGal6.rbest.net.gz: melGal5-referenced recip.best net to galGal6.
- melGal5.galGal6.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from melGal5 to galGal6 through the recip.best net.
- galGal6.melGal5.rbest.net.gz: galGal6-referenced recip.best net.
- galGal6.melGal5.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/melGal5.galGal6.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2018-10-26 10:41 -
galGal6.melGal5.rbest.chain.gz 2018-10-26 04:53 23M
galGal6.melGal5.rbest.net.gz 2018-10-26 04:53 42M
md5sum.txt 2018-10-26 04:54 256
melGal5.galGal6.rbest.chain.gz 2018-10-26 04:53 23M
melGal5.galGal6.rbest.net.gz 2018-10-26 04:54 33M