This directory contains reciprocal-best netted chains for mm10-bisBis1.
- mm10.bisBis1.rbest.net.gz: mm10-referenced recip.best net to bisBis1.
- mm10.bisBis1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm10 to bisBis1 through the recip.best net.
- bisBis1.mm10.rbest.net.gz: bisBis1-referenced recip.best net.
- bisBis1.mm10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm10.bisBis1.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-03-18 06:53 -
bisBis1.mm10.rbest.chain.gz 2017-03-17 23:47 51M
bisBis1.mm10.rbest.net.gz 2017-03-17 23:45 103M
md5sum.txt 2017-03-17 23:50 244
mm10.bisBis1.rbest.chain.gz 2017-03-17 23:47 50M
mm10.bisBis1.rbest.net.gz 2017-03-17 23:50 82M