This directory contains reciprocal-best netted chains for papAnu2-rheMac10.

 - papAnu2.rheMac10.rbest.net.gz: papAnu2-referenced recip.best net to rheMac10.
 - papAnu2.rheMac10.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from papAnu2 to rheMac10 through the recip.best net.

 - rheMac10.papAnu2.rbest.net.gz: rheMac10-referenced recip.best net.
 - rheMac10.papAnu2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/papAnu2.rheMac10.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                            Last modified      Size  Description
      Parent Directory                                     -   
      axtRBestNet/                    2022-03-17 19:01    -   
      md5sum.txt                      2022-03-17 11:40  260   
      papAnu2.rheMac10.rbest.net.gz   2022-03-17 11:40   22M  
      papAnu2.rheMac10.rbest.chain.gz 2022-03-17 11:40   14M  
      rheMac10.papAnu2.rbest.chain.gz 2022-03-17 11:40   14M  
      rheMac10.papAnu2.rbest.net.gz   2022-03-17 11:40   22M