This directory contains reciprocal-best netted chains for rn6-tarSyr2.
- rn6.tarSyr2.rbest.net.gz: rn6-referenced recip.best net to tarSyr2.
- rn6.tarSyr2.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from rn6 to tarSyr2 through the recip.best net.
- tarSyr2.rn6.rbest.net.gz: tarSyr2-referenced recip.best net.
- tarSyr2.rn6.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/rn6.tarSyr2.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-01-20 02:02 -
md5sum.txt 2017-01-19 08:14 240
rn6.tarSyr2.rbest.chain.gz 2017-01-19 08:12 71M
rn6.tarSyr2.rbest.net.gz 2017-01-19 08:13 108M
tarSyr2.rn6.rbest.chain.gz 2017-01-19 08:11 71M
tarSyr2.rn6.rbest.net.gz 2017-01-19 08:09 147M