This directory contains reciprocal-best netted chains for strPur2-ci3. - strPur2.ci3.rbest.net.gz: strPur2-referenced recip.best net to ci3. - strPur2.ci3.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from strPur2 to ci3 through the recip.best net. - ci3.strPur2.rbest.net.gz: ci3-referenced recip.best net. - ci3.strPur2.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/strPur2.ci3.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-03-22 10:24 - strPur2.ci3.rbest.net.gz 2017-03-22 10:16 836K md5sum.txt 2017-03-22 10:16 240 strPur2.ci3.rbest.chain.gz 2017-03-22 10:16 583K ci3.strPur2.rbest.chain.gz 2017-03-22 10:16 582K ci3.strPur2.rbest.net.gz 2017-03-22 10:16 809K