This directory contains reciprocal-best netted chains for xenTro10-mm39.
- xenTro10.mm39.rbest.net.gz: xenTro10-referenced recip.best net to mm39.
- xenTro10.mm39.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from xenTro10 to mm39 through the recip.best net.
- mm39.xenTro10.rbest.net.gz: mm39-referenced recip.best net.
- mm39.xenTro10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/xenTro10.mm39.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
mm39.xenTro10.rbest.net.gz 2021-02-23 07:55 5.4M
xenTro10.mm39.rbest.net.gz 2021-02-23 07:55 5.3M
xenTro10.mm39.rbest.chain.gz 2021-02-23 07:55 3.1M
mm39.xenTro10.rbest.chain.gz 2021-02-23 07:55 3.1M
md5sum.txt 2021-02-23 07:55 248
axtRBestNet/ 2021-07-20 13:43 -