# AGP dumped from Genomic-Collection: Assembly GRCh38.p9 PATCHES # (Assembly accession = GCA_000005045.22, asm_id = 971853) # Scaffolds-from-components ##agp-version 2.0 # Format: object object_beg object_end part_number component_type component_id component_beg component_end orientation # Gaps: object object_beg object_end part_number N gap_length gap_type linkage evidence chr1_KQ031383v1_fix 1 135897 1 F AC245034.2 1 135897 - chr1_KQ031383v1_fix 135898 158724 2 F AC256219.1 98659 121485 - chr1_KQ031383v1_fix 158725 351331 3 F AC245056.3 1 192607 - chr1_KQ031383v1_fix 351332 467143 4 F AC244216.2 1 115812 - chr1_KQ983255v1_alt 1 174475 1 F AC245056.3 18133 192607 - chr1_KQ983255v1_alt 174476 211458 2 F CR589905.6 1 36983 - chr1_KQ983255v1_alt 211459 278659 3 F AC244216.2 1 67201 - chr1_KN538361v1_fix 1 129966 1 F AL590644.14 2001 131966 + chr1_KN538361v1_fix 129967 172036 2 F AL138798.11 1 42070 + chr1_KN538361v1_fix 172037 237108 3 F AC004824.3 70435 135506 - chr1_KN538361v1_fix 237109 237661 4 O KF573689.1 1 553 - chr1_KN538361v1_fix 237662 305542 5 F AC004824.3 2000 69880 - chr1_KQ458383v1_alt 1 10198 1 F AL109936.11 1 10198 + chr1_KQ458383v1_alt 10199 48933 2 F AC209232.3 1 38735 + chr1_KQ458383v1_alt 48934 157749 3 F AL109936.11 41470 150285 + chr1_KQ458383v1_alt 157750 222213 4 F AL357134.13 2001 66464 + chr1_KQ458383v1_alt 222214 267593 5 F AL021154.1 2001 47380 + chr1_KQ458383v1_alt 267594 267980 6 O KF510725.1 1 387 - chr1_KQ458383v1_alt 267981 298216 7 F AL021154.1 47767 78002 + chr1_KQ458383v1_alt 298217 298493 8 O KF495899.1 1 277 + chr1_KQ458383v1_alt 298494 310071 9 F AL021154.1 78280 89857 + chr1_KQ458383v1_alt 310072 310300 10 O KF510726.1 1 229 - chr1_KQ458383v1_alt 310301 330666 11 F AL021154.1 90086 110451 + chr1_KQ458383v1_alt 330667 331013 12 O KF510724.1 1 347 - chr1_KQ458383v1_alt 331014 349938 13 F AL021154.1 110798 129722 + chr1_KN196473v1_fix 1 128277 1 F AL627313.16 1 128277 - chr1_KN196473v1_fix 128278 166200 2 F AL627082.9 2001 39923 + chr1_KN196472v1_fix 1 109220 1 F AC093151.2 2001 111220 + chr1_KN196472v1_fix 109221 151407 2 F FO681542.2 1 42187 + chr1_KN196472v1_fix 151408 175855 3 F AC093151.2 153191 177638 + chr1_KN196472v1_fix 175856 175911 4 O KF570255.1 1 56 + chr1_KN196472v1_fix 175912 186494 5 F AC093151.2 177694 188276 + chr1_KQ458382v1_alt 1 820 1 F AL136455.6 134922 135741 - chr1_KQ458382v1_alt 821 39447 2 F AC205875.2 1 38627 + chr1_KQ458382v1_alt 39448 141019 3 F AL136455.6 1 101572 - chr1_KN196474v1_fix 1 51402 1 F AL158844.14 2001 53402 + chr1_KN196474v1_fix 51403 122022 2 F AL390242.18 101 70720 + chr1_KN538360v1_fix 1 40952 1 F AL035414.30 1999 42950 + chr1_KN538360v1_fix 40953 41096 2 O KF455136.1 1 144 + chr1_KN538360v1_fix 41097 106135 3 F AL035414.30 43095 108133 + chr1_KN538360v1_fix 106136 106496 4 O KF510719.1 1 361 - chr1_KN538360v1_fix 106497 129242 5 F AL035414.30 108494 131239 + chr1_KN538360v1_fix 129243 219984 6 F AL034351.1 46837 137578 - chr1_KN538360v1_fix 219985 220276 7 O KF455134.1 1 292 + chr1_KN538360v1_fix 220277 266820 8 F AL034351.1 1 46544 - chr1_KN538360v1_fix 266821 380923 9 F AL590653.11 2001 116103 + chr1_KN538360v1_fix 380924 382917 10 F BX255872.1 2001 3994 + chr1_KN538360v1_fix 382918 422076 11 F AL691441.8 2001 41159 + chr1_KN538360v1_fix 422077 460100 12 F AC217414.3 1 38024 - chr1_KQ458384v1_alt 1 36797 1 F AL357556.18 2001 38797 + chr1_KQ458384v1_alt 36798 74608 2 F AC206484.3 1 37811 - chr1_KQ458384v1_alt 74609 212205 3 F FO393422.1 23411 161007 + chr2_KQ031384v1_fix 1 73811 1 F AC243970.3 1 73811 - chr2_KQ031384v1_fix 73812 304125 2 F AC245015.2 25116 255429 + chr2_KQ031384v1_fix 304126 439505 3 F AC244255.3 63620 198999 + chr2_KQ031384v1_fix 439506 481245 4 F AC255551.1 172097 213836 + chr2_KQ983256v1_alt 1 168034 1 F AC007679.4 1 168034 + chr2_KQ983256v1_alt 168035 170028 2 F AC092677.4 1 1994 + chr2_KQ983256v1_alt 170029 327192 3 F AC007383.4 1 157164 + chr2_KQ983256v1_alt 327193 364907 4 F AC225768.2 1 37715 + chr2_KQ983256v1_alt 364908 387626 5 F AC007383.4 190260 212978 + chr2_KQ983256v1_alt 387627 535088 6 F AC017081.8 1 147462 + chr2_KN538363v1_fix 1 50417 1 F AC108511.4 2001 52417 + chr2_KN538363v1_fix 50418 52303 2 F AC141929.2 1 1886 + chr2_KN538363v1_fix 52304 52691 3 O KF456772.1 1 388 + chr2_KN538363v1_fix 52692 84369 4 F AC141929.2 2275 33952 + chr2_KN538363v1_fix 84370 88053 5 W ABBA01001995.1 1 3684 - chr2_KN538363v1_fix 88054 90433 6 W AUXG01000014.1 28693 31072 + chr2_KN538363v1_fix 90434 122715 7 F AC233715.2 1 32282 - chr2_KN538363v1_fix 122716 151052 8 F AC114729.4 16558 44894 + chr2_KN538363v1_fix 151053 365499 9 F AC013726.7 201 214647 - chr2_KN538362v1_fix 1 165535 1 F AC093802.3 1 165535 + chr2_KN538362v1_fix 165536 169159 2 W ABBA01033508.1 1 3624 - chr2_KN538362v1_fix 169160 172818 3 W AUXG01000020.1 318 3976 - chr2_KN538362v1_fix 172819 208149 4 F AC233275.2 1 35331 - chr3_KV766192v1_fix 1 114563 1 F AC091493.2 66641 181203 + chr3_KV766192v1_fix 114564 114924 2 O KF510227.1 1 361 + chr3_KV766192v1_fix 114925 120312 3 F AC091493.2 181566 186953 + chr3_KV766192v1_fix 120313 197292 4 F AC091291.2 47643 124622 - chr3_KV766192v1_fix 197293 197842 5 W AEKP01168581.1 103232 103781 + chr3_KV766192v1_fix 197843 244928 6 F AC091291.2 1 47086 - chr3_KV766192v1_fix 244929 270796 7 F AC090943.3 16614 42481 - chr3_KV766192v1_fix 270797 271188 8 O KF457605.1 1 392 - chr3_KV766192v1_fix 271189 287409 9 F AC090943.3 1 16221 - chr3_KV766192v1_fix 287410 411654 10 F AC091491.3 5 124249 - chr3_KN196475v1_fix 1 185690 1 F AC099669.2 31346 217035 + chr3_KN196475v1_fix 185691 246780 2 F AC092046.2 1 61090 - chr3_KN196475v1_fix 246781 248892 3 F AC124045.2 62855 64966 + chr3_KN196475v1_fix 248893 451168 4 F AC098649.2 1868 204143 + chr3_KQ031385v1_fix 1 131915 1 F AC145425.5 3977 135891 + chr3_KQ031385v1_fix 131916 159794 2 F AC170801.2 11410 39288 + chr3_KQ031385v1_fix 159795 169474 3 W AUXG01000021.1 52083 61762 - chr3_KQ031385v1_fix 169475 206495 4 F AC235952.3 1 37021 + chr3_KQ031385v1_fix 206496 234537 5 F AC170165.1 1 28042 - chr3_KQ031385v1_fix 234538 373699 6 F AC092034.2 14923 154084 + chr3_KN538364v1_fix 1 28441 1 F AC104330.2 147778 176218 - chr3_KN538364v1_fix 28442 233605 2 F AC255560.1 1 205164 + chr3_KN538364v1_fix 233606 415308 3 F AC097369.2 1 181703 - chr3_KQ031386v1_fix 1 20902 1 W ABBA01004653.1 1 20902 + chr3_KQ031386v1_fix 20903 34774 2 W AUXG01000382.1 5260 19131 + chr3_KQ031386v1_fix 34775 165718 3 W ABBA01004655.1 1 130944 + chr3_KN196476v1_fix 1 2183 1 W ABBA01000927.1 1 2183 + chr3_KN196476v1_fix 2184 8699 2 N 6516 scaffold yes paired-ends chr3_KN196476v1_fix 8700 10168 3 W ABBA01000928.1 1 1469 + chr3_KN196476v1_fix 10169 12458 4 N 2290 scaffold yes paired-ends chr3_KN196476v1_fix 12459 17659 5 W ABBA01000929.1 1 5201 + chr3_KN196476v1_fix 17660 29272 6 N 11613 scaffold yes paired-ends chr3_KN196476v1_fix 29273 34453 7 W ABBA01000930.1 1 5181 + chr3_KN196476v1_fix 34454 35012 8 N 559 scaffold yes paired-ends chr3_KN196476v1_fix 35013 43347 9 W ABBA01000931.1 1 8335 + chr3_KN196476v1_fix 43348 43496 10 N 149 scaffold yes paired-ends chr3_KN196476v1_fix 43497 70015 11 W ABBA01000932.1 1 26519 + chr3_KN196476v1_fix 70016 233155 12 F AL354926.17 1 163140 - chr3_KN196476v1_fix 233156 305979 13 W ABBA01000935.1 41678 114501 + chr4_KQ090013v1_alt 1 2784 1 F AC105289.4 1 2784 + chr4_KQ090013v1_alt 2785 40420 2 F AC210970.2 1 37636 - chr4_KQ090013v1_alt 40421 90922 3 F AC105289.4 37078 87579 + chr4_KQ090014v1_alt 1 25687 1 F AC096721.2 1 25687 + chr4_KQ090014v1_alt 25688 63519 2 F AC207300.3 1 37832 - chr4_KQ090014v1_alt 63520 163749 3 F AC096721.2 59595 159824 + chr4_KQ090015v1_alt 1 21517 1 F AC063956.7 1995 23511 + chr4_KQ090015v1_alt 21518 21912 2 O KF510868.1 1 395 + chr4_KQ090015v1_alt 21913 103153 3 F AC063956.7 23906 105146 + chr4_KQ090015v1_alt 103154 142846 4 F AC221038.3 1 39693 - chr4_KQ090015v1_alt 142847 236512 5 F AC104811.4 816 94481 + chr4_KV766193v1_alt 1 55029 1 F AC079298.8 1 55029 + chr4_KV766193v1_alt 55030 96149 2 F AC245657.1 1 41120 + chr4_KV766193v1_alt 96150 205915 3 F AC079298.8 89057 198822 + chr4_KV766193v1_alt 205916 212375 4 F AC110608.4 1 6460 + chr4_KV766193v1_alt 212376 420675 5 F AC110775.3 1 208300 + chr4_KQ983257v1_fix 1 87617 1 O AF146191.1 1 87617 + chr4_KQ983257v1_fix 87618 216737 2 F CT476828.7 1 129120 + chr4_KQ983257v1_fix 216738 230434 3 F AC215524.3 1 13697 - chr4_KQ983258v1_alt 1 87617 1 O AF146191.1 1 87617 + chr4_KQ983258v1_alt 87618 200425 2 F CT476828.7 1 112808 + chr4_KQ983258v1_alt 200426 203928 3 O HM190170.1 1 3503 + chr4_KQ983258v1_alt 203929 205407 4 O U74497.1 2186 3664 + chr5_KN196477v1_alt 1 97530 1 F AC140172.3 68572 166101 + chr5_KN196477v1_alt 97531 139087 2 F AC208067.2 1 41557 + chr5_KV575243v1_alt 1 225866 1 F AC270107.1 1 225866 - chr5_KV575243v1_alt 225867 362221 2 F AC091946.5 62774 199128 + chr5_KV575244v1_fix 1 182705 1 F AC109479.3 1 182705 - chr5_KV575244v1_fix 182706 390679 2 F AC270306.1 1 207974 - chr5_KV575244v1_fix 390680 595964 3 F AC270227.1 1 205285 - chr5_KV575244v1_fix 595965 633822 4 F AC008393.7 89753 127610 + chr5_KV575244v1_fix 633823 634108 5 O KF458070.1 1 286 + chr5_KV575244v1_fix 634109 673059 6 F AC008393.7 127897 166847 + chr6_KQ090017v1_alt 1 19084 1 F AL391385.9 2001 21084 + chr6_KQ090017v1_alt 19085 59061 2 F AC213202.1 1 39977 - chr6_KQ090017v1_alt 59062 82315 3 F AL391385.9 56211 79464 + chr6_KQ031387v1_fix 1 170095 1 F AL356131.12 1 170095 + chr6_KQ031387v1_fix 170096 252139 2 F LO000005.2 2001 84044 + chr6_KQ031387v1_fix 252140 320750 3 F FP325349.3 2001 70611 + chr6_KN196478v1_fix 1 177963 1 F AL512455.8 1 177963 + chr6_KN196478v1_fix 177964 268330 2 F AL512368.9 57253 147619 + chr6_KQ090016v1_fix 1 113704 1 F AL050333.18 101 113804 + chr6_KQ090016v1_fix 113705 137595 2 F AC209420.3 17762 41652 + chr6_KQ090016v1_fix 137596 245716 3 F AL121977.11 13789 121909 + chr6_KV766194v1_fix 1 67727 1 F AL353692.14 101 67827 + chr6_KV766194v1_fix 67728 70070 2 W LJII01000001.1 28656347 28658689 + chr6_KV766194v1_fix 70071 139427 3 F AL353692.14 67828 137184 + chr7_KQ031388v1_fix 1 151198 1 F AC024730.7 1 151198 - chr7_KQ031388v1_fix 151199 155919 2 W AUXG01000062.1 4428 9148 - chr7_KQ031388v1_fix 155920 179932 3 F AC142230.3 1 24013 + chr9_KQ090018v1_alt 1 9369 1 F AL353638.15 2001 11369 + chr9_KQ090018v1_alt 9370 47115 2 F AC245202.1 1 37746 + chr9_KQ090018v1_alt 47116 163882 3 F AL353638.15 44301 161067 + chr9_KQ090019v1_alt 1 19370 1 F AL355975.10 2001 21370 + chr9_KQ090019v1_alt 19371 58310 2 F AC203630.3 1 38940 - chr9_KQ090019v1_alt 58311 134099 3 F AL355975.10 55917 131705 + chr9_KN196479v1_fix 1 27097 1 F AL732364.10 2001 29097 + chr9_KN196479v1_fix 27098 176579 2 F AL772161.10 1 149482 + chr9_KN196479v1_fix 176580 330164 3 F AL593848.15 2001 155585 + chr10_KN538367v1_fix 1 140616 1 F AC127389.2 1 140616 + chr10_KN538367v1_fix 140617 311649 2 W ABBA01020717.1 1 171033 - chr10_KN538367v1_fix 311650 312026 3 W AUXG01000305.1 56400 56776 + chr10_KN538367v1_fix 312027 320844 4 W ABBA01020716.1 1 8818 + chr10_KN538367v1_fix 320845 322320 5 W AUXG01000305.1 65590 67065 + chr10_KN538367v1_fix 322321 336452 6 W ABBA01020715.1 1 14132 + chr10_KN538367v1_fix 336453 336709 7 W AUXG01000305.1 81196 81452 + chr10_KN538367v1_fix 336710 359027 8 W ABBA01020714.1 1 22318 + chr10_KN538367v1_fix 359028 364512 9 W AUXG01000307.1 5328 10812 + chr10_KN538367v1_fix 364513 420164 10 W ABBA01020712.1 1 55652 - chr10_KQ090020v1_alt 1 39204 1 F AC233758.2 1 39204 - chr10_KQ090020v1_alt 39205 185507 2 F AC020641.8 19796 166098 + chr10_KN196480v1_fix 1 30521 1 F AL360225.18 1 30521 + chr10_KN196480v1_fix 30522 190268 2 F AC063962.11 1 159747 - chr10_KN196480v1_fix 190269 277797 3 F AC018511.5 71991 159519 + chr10_KQ090021v1_fix 1 161031 1 F AC022016.7 2001 163031 + chr10_KQ090021v1_fix 161032 264545 2 F AC063965.8 1 103514 - chr10_KN538366v1_fix 1 10453 1 F FP885909.2 2001 12453 + chr10_KN538366v1_fix 10454 15071 2 W AUXG01000081.1 35452 40069 + chr10_KN538366v1_fix 15072 67283 3 W ABBA01016844.1 3303 55514 + chr10_KN538366v1_fix 67284 85284 4 F FO681490.2 1 18001 + chr10_KN538365v1_fix 1 92 1 F FO082816.4 2001 2092 + chr10_KN538365v1_fix 93 5935 2 W AUXG01000085.1 29280 35122 + chr10_KN538365v1_fix 5936 14347 3 F BX294094.5 1 8412 + chr11_KQ759759v1_fix 1 2390 1 F AC139749.4 129287 131676 - chr11_KQ759759v1_fix 2391 2681 2 O KC877389.1 1 291 + chr11_KQ759759v1_fix 2682 2849 3 F AC139749.4 128828 128995 - chr11_KQ759759v1_fix 2850 3111 4 O KC877387.1 1 262 + chr11_KQ759759v1_fix 3112 24163 5 F AC139749.4 107514 128565 - chr11_KQ759759v1_fix 24164 153255 6 F AC256300.1 99402 228493 + chr11_KQ759759v1_fix 153256 186593 7 O KC800812.1 307 33644 + chr11_KQ759759v1_fix 186594 196940 8 F FO680660.6 8198 18544 + chr11_KN538368v1_alt 1 24602 1 F AC044810.7 1 24602 + chr11_KN538368v1_alt 24603 65374 2 F AC243812.1 1 40772 + chr11_KN538368v1_alt 65375 90140 3 F AC044810.7 55249 80014 + chr11_KN538368v1_alt 90141 90526 4 O KF459744.1 1 386 + chr11_KN538368v1_alt 90527 203552 5 F AC044810.7 80401 193426 + chr11_KV766195v1_fix 1 75435 1 F AC110057.3 35200 110634 - chr11_KV766195v1_fix 75436 140877 2 F FP710250.11 77424 142865 + chr11_KQ090022v1_fix 1 75280 1 F AP000722.5 1 75280 + chr11_KQ090022v1_fix 75281 110311 2 F AC203617.3 1 35031 - chr11_KQ090022v1_fix 110312 181958 3 F AP000722.5 106236 177882 + chr11_KN196481v1_fix 1 49077 1 F AP003392.2 69466 118542 + chr11_KN196481v1_fix 49078 49570 2 O FP885832.1 1 493 + chr11_KN196481v1_fix 49571 64389 3 F AP003392.2 119037 133855 + chr11_KN196481v1_fix 64390 64776 4 O KF510358.1 1 387 + chr11_KN196481v1_fix 64777 66474 5 F AP003392.2 134244 135941 + chr11_KN196481v1_fix 66475 66830 6 O KF510357.1 1 356 - chr11_KN196481v1_fix 66831 77724 7 F AP003392.2 136299 147192 + chr11_KN196481v1_fix 77725 78070 8 O KF511132.1 1 346 - chr11_KN196481v1_fix 78071 90598 9 F AP003392.2 147538 160065 + chr11_KN196481v1_fix 90599 91018 10 O KF511489.1 1 420 - chr11_KN196481v1_fix 91019 108875 11 F AP003392.2 160485 178341 + chr12_KQ090023v1_alt 1 16457 1 F AC092469.10 2001 18457 + chr12_KQ090023v1_alt 16458 52954 2 F AC234852.4 1 36497 + chr12_KQ090023v1_alt 52955 109323 3 F AC092469.10 48027 104395 + chr12_KN538369v1_fix 1 119504 1 F AC007537.3 209 119712 + chr12_KN538369v1_fix 119505 119894 2 O KF455603.1 1 390 + chr12_KN538369v1_fix 119895 190650 3 F AC007537.3 120103 190858 + chr12_KN538369v1_fix 190651 332646 4 F AC007621.34 2005 144000 + chr12_KN538369v1_fix 332647 362705 5 F AC255400.1 46211 76269 + chr12_KN538369v1_fix 362706 494024 6 F AC007619.23 8837 140155 - chr12_KN538369v1_fix 494025 494400 7 O KF455604.1 1 376 + chr12_KN538369v1_fix 494401 502860 8 F AC007619.23 1 8460 - chr12_KN538369v1_fix 502861 541038 9 F AC092824.13 1 38178 - chr12_KN196482v1_fix 1 18790 1 F AC093950.6 2005 20794 + chr12_KN196482v1_fix 18791 211377 2 F AC255545.1 2006 194592 + chr12_KQ759760v1_fix 1 58491 1 F AC128681.6 2002 60492 + chr12_KQ759760v1_fix 58492 158844 2 F AC270142.1 12242 112594 + chr12_KQ759760v1_fix 158845 315610 3 F AC079597.13 1 156766 - chr12_KN538370v1_fix 1 25997 1 F AC156455.1 1 25997 - chr12_KN538370v1_fix 25998 34983 2 D AC205581.1 1 8986 - chr12_KN538370v1_fix 34984 35110 3 W ABBA01020202.1 13403 13529 + chr12_KN538370v1_fix 35111 36477 4 W AUXG01000113.1 25557 26923 - chr12_KN538370v1_fix 36478 37033 5 W ABBA01060482.1 1 556 + chr12_KN538370v1_fix 37034 71733 6 F AC190384.1 1 34700 - chr12_KN538370v1_fix 71734 86533 7 F AC130894.5 8904 23703 + chr13_KN538372v1_fix 1 171908 1 F AL161418.14 1 171908 + chr13_KN538372v1_fix 171909 356766 2 F AL356585.7 2001 186858 + chr13_KQ090024v1_alt 1 38017 1 F AL162493.21 101 38117 + chr13_KQ090024v1_alt 38018 79085 2 F AC212759.2 1 41068 + chr13_KQ090024v1_alt 79086 168146 3 F AL162493.21 69023 158083 + chr13_KN196483v1_fix 1 2641 1 F FP565796.3 1 2641 + chr13_KN196483v1_fix 2642 35455 2 F BX088568.4 1995 34808 + chr13_KN538373v1_fix 1 129540 1 F AL139374.19 2001 131540 + chr13_KN538373v1_fix 129541 148762 2 F AL391841.17 1 19222 - chr13_KQ090025v1_alt 1 83706 1 F AL157771.11 2001 85706 + chr13_KQ090025v1_alt 83707 123480 2 F AC225710.3 1 39774 - chr13_KN538371v1_fix 1 27640 1 F FP565324.3 2001 29640 + chr13_KN538371v1_fix 27641 29853 2 W AUXG01000135.1 19093 21305 - chr13_KN538371v1_fix 29854 35563 3 F FP565325.3 1 5710 + chr13_KN538371v1_fix 35564 47970 4 F BX537329.2 2001 14407 + chr13_KN538371v1_fix 47971 110204 5 F AL161774.49 1948 64181 + chr13_KN538371v1_fix 110205 110345 6 O KF511195.1 1 141 + chr13_KN538371v1_fix 110346 206320 7 F AL161774.49 64322 160296 + chr15_KN538374v1_fix 1 99241 1 F AC079090.4 1 99241 - chr15_KN538374v1_fix 99242 325986 2 F AC243653.3 1 226745 - chr15_KN538374v1_fix 325987 373022 3 W AMYH02030122.1 262715 309750 + chr15_KN538374v1_fix 373023 570276 4 F AC243660.3 1 197254 - chr15_KN538374v1_fix 570277 776772 5 F AC243913.2 1 206496 - chr15_KN538374v1_fix 776773 881652 6 F AC243951.3 1 104880 - chr15_KN538374v1_fix 881653 966409 7 F AC243657.2 122707 207463 + chr15_KN538374v1_fix 966410 1076278 8 W AMYH02030123.1 78561 188429 + chr15_KN538374v1_fix 1076279 1079711 9 N 3433 scaffold yes align_genus chr15_KN538374v1_fix 1079712 1292454 10 F AC243901.3 1 212743 - chr15_KN538374v1_fix 1292455 1473233 11 F AC243902.3 1 180779 - chr15_KN538374v1_fix 1473234 1654867 12 F AC243686.3 34966 216599 + chr15_KN538374v1_fix 1654868 1814701 13 F AC243652.4 45976 205809 + chr15_KN538374v1_fix 1814702 1981925 14 F AC243587.3 50260 217483 + chr15_KN538374v1_fix 1981926 2166692 15 F AC244165.2 21501 206267 + chr15_KN538374v1_fix 2166693 2301802 16 F AC243949.2 1 135110 - chr15_KN538374v1_fix 2301803 2451124 17 F AC243790.3 1 149322 - chr15_KN538374v1_fix 2451125 2643220 18 F AC243679.3 1 192096 - chr15_KN538374v1_fix 2643221 2698555 19 F AC247157.4 168160 223494 + chr15_KN538374v1_fix 2698556 2890474 20 F AC243687.3 27929 219847 + chr15_KN538374v1_fix 2890475 3031763 21 F AC244012.2 1 141289 - chr15_KN538374v1_fix 3031764 3236248 22 F AC243758.2 1 204485 - chr15_KN538374v1_fix 3236249 3426692 23 F AC243586.3 1 190444 - chr15_KN538374v1_fix 3426693 3581557 24 F AC243650.3 84236 239100 + chr15_KN538374v1_fix 3581558 3785140 25 F AC243688.3 1 203583 - chr15_KN538374v1_fix 3785141 3964356 26 F AC243759.3 14039 193254 + chr15_KN538374v1_fix 3964357 4116759 27 F AC243649.4 1 152403 - chr15_KN538374v1_fix 4116760 4284113 28 F AC243734.3 1 167354 - chr15_KN538374v1_fix 4284114 4481454 29 F AC243827.3 1 197341 - chr15_KN538374v1_fix 4481455 4501706 30 F AC253577.2 1 20252 - chr15_KN538374v1_fix 4501707 4535264 31 N 33558 scaffold yes align_genus chr15_KN538374v1_fix 4535265 4746524 32 F AC243655.3 1 211260 + chr15_KN538374v1_fix 4746525 4929534 33 F AC243948.1 1 183010 - chr15_KN538374v1_fix 4929535 4998962 34 F AC090982.4 1 69428 - chr15_KQ031389v1_alt 1 12516 1 F AC111152.2 11587 24102 + chr15_KQ031389v1_alt 12517 116749 2 P AC254979.1 1 104233 + chr15_KQ031389v1_alt 116750 241607 3 F AC254962.1 1 124858 - chr15_KQ031389v1_alt 241608 349073 4 F AC254958.1 1 107466 - chr15_KQ031389v1_alt 349074 458462 5 F AC254952.1 1 109389 - chr15_KQ031389v1_alt 458463 529084 6 F AC254957.1 1 70622 - chr15_KQ031389v1_alt 529085 1869010 7 N 1339926 scaffold yes align_genus chr15_KQ031389v1_alt 1869011 1932321 8 P AC254944.1 102435 165745 - chr15_KQ031389v1_alt 1932322 2062162 9 F AC254960.1 76 129916 + chr15_KQ031389v1_alt 2062163 2223307 10 F AC254945.1 9488 170632 + chr15_KQ031389v1_alt 2223308 2365364 11 F AC090877.4 39404 181460 + chr16_KQ090026v1_alt 1 12300 1 F AC005361.1 6874 19173 - chr16_KQ090026v1_alt 12301 49750 2 F AC217628.3 1 37450 + chr16_KQ090026v1_alt 49751 59016 3 F AC003965.1 1 9266 - chr16_KQ090027v1_alt 1 53273 1 F AC099495.2 105960 159232 - chr16_KQ090027v1_alt 53274 235378 2 F AC009136.6 1 182105 - chr16_KQ090027v1_alt 235379 248333 3 F AC106736.4 19131 32085 - chr16_KQ090027v1_alt 248334 248695 4 O KF456204.1 1 362 + chr16_KQ090027v1_alt 248696 267463 5 F AC106736.4 1 18768 - chr16_KQ031390v1_alt 1 61911 1 F AC092379.4 99401 161311 - chr16_KQ031390v1_alt 61912 101815 2 F AC203638.2 1 39904 + chr16_KQ031390v1_alt 101816 169136 3 F AC092379.4 1 67321 - chr17_KV766196v1_fix 1 44198 1 F AC141424.4 20560 64757 + chr17_KV766196v1_fix 44199 45551 2 F AC233274.2 34292 35644 + chr17_KV766196v1_fix 45552 52863 3 W LJII01000250.1 451684 458995 - chr17_KV766196v1_fix 52864 99857 4 F AC015853.8 1 46994 + chr17_KV766196v1_fix 99858 100611 5 O KC877635.1 1 754 - chr17_KV766196v1_fix 100612 103595 6 F AC015853.8 47749 50732 + chr17_KV766196v1_fix 103596 104108 7 O KC877627.1 1 513 - chr17_KV766196v1_fix 104109 150214 8 F AC015853.8 51246 97351 + chr17_KV766196v1_fix 150215 281919 9 F AC027455.22 13702 145406 + chr17_KV575245v1_fix 1 117087 1 F AC113189.11 29627 146713 + chr17_KV575245v1_fix 117088 117447 2 O KF459570.1 1 360 - chr17_KV575245v1_fix 117448 121184 3 F AC113189.11 147074 150810 + chr17_KV575245v1_fix 121185 121277 4 O KF459569.2 1 93 + chr17_KV575245v1_fix 121278 133812 5 F AC113189.11 150904 163438 + chr17_KV575245v1_fix 133813 134231 6 W AEKP01075050.1 4155 4573 + chr17_KV575245v1_fix 134232 154723 7 F AC113189.11 163858 184349 + chr17_KV766198v1_alt 1 109306 1 F AC127537.8 13866 123171 + chr17_KV766198v1_alt 109307 148759 2 F AC240249.3 1 39453 + chr17_KV766198v1_alt 148760 276292 3 F AL353997.3 47571 175103 + chr17_KV766197v1_alt 1 110312 1 F AC009222.4 52130 162441 - chr17_KV766197v1_alt 110313 110698 2 O KF456290.1 1 386 + chr17_KV766197v1_alt 110699 162441 3 F AC009222.4 1 51743 - chr17_KV766197v1_alt 162442 200594 4 W ABBA01041271.1 300468 338620 + chr17_KV766197v1_alt 200595 246895 5 F AC024918.5 1 46301 - chr18_KQ458385v1_alt 1 130607 1 F AC099849.4 1186 131792 + chr18_KQ458385v1_alt 130608 168922 2 F AC221035.4 1 38315 - chr18_KQ458385v1_alt 168923 205101 3 F AC099849.4 164428 200606 + chr18_KQ090028v1_fix 1 102076 1 F AC048380.12 67653 169728 - chr18_KQ090028v1_fix 102077 261825 2 F AC022919.8 1 159749 + chr18_KQ090028v1_fix 261826 301812 3 F AC093567.13 29138 69124 + chr18_KQ090028v1_fix 301813 302081 4 O KF456403.1 1 269 - chr18_KQ090028v1_fix 302082 361637 5 F AC093567.13 69394 128949 + chr18_KQ090028v1_fix 361638 362001 6 O KF511246.1 1 364 - chr18_KQ090028v1_fix 362002 407387 7 F AC093567.13 129313 174698 + chr19_KQ458386v1_fix 1 120468 1 F AC008649.8 6215 126682 + chr19_KQ458386v1_fix 120469 214950 2 F AC256309.1 109739 204220 - chr19_KQ458386v1_fix 214951 233801 3 F AC104534.2 7256 26106 + chr19_KQ458386v1_fix 233802 264361 4 F AC008982.5 16022 46581 + chr19_KQ458386v1_fix 264362 405389 5 F AC011455.6 7849 148876 + chr19_KN196484v1_fix 1 8997 1 F AC005393.1 19222 28218 + chr19_KN196484v1_fix 8998 9289 2 O KF456579.1 1 292 + chr19_KN196484v1_fix 9290 104593 3 F AC005393.1 28511 123814 + chr19_KN196484v1_fix 104594 135460 4 F AC006950.1 8009 38875 + chr19_KN196484v1_fix 135461 157795 5 F AC011536.6 7386 29720 + chr19_KN196484v1_fix 157796 330910 6 F AC007842.1 895 174009 + chr19_KN196484v1_fix 330911 370917 7 F AC005614.1 7042 47048 + chr19_KV575246v1_alt 1 20827 1 F AC245128.3 1 20827 + chr19_KV575246v1_alt 20828 163926 2 O KP420439.1 2 143100 + chr19_KV575247v1_alt 1 27123 1 F AC245128.3 1 27123 + chr19_KV575247v1_alt 27124 170206 2 O KU842452.1 2 143084 + chr19_KV575248v1_alt 1 21561 1 F AC245128.3 1 21561 + chr19_KV575248v1_alt 21562 168131 2 O KU645195.1 1 146570 + chr19_KV575249v1_alt 1 25579 1 F AC245128.3 1 25579 + chr19_KV575249v1_alt 25580 293522 2 O KU645196.1 1 267943 + chr19_KV575250v1_alt 1 36680 1 F AC245128.3 1 36680 + chr19_KV575250v1_alt 36681 200283 2 O KU645197.1 1 163603 + chr19_KV575250v1_alt 200284 241058 3 F AC245128.3 172835 213609 + chr19_KV575251v1_alt 1 17611 1 F AC245128.3 1 17611 + chr19_KV575251v1_alt 17612 159285 2 O KP420442.1 1 141674 + chr19_KV575252v1_alt 1 26191 1 F AC245128.3 1 26191 + chr19_KV575252v1_alt 26192 178197 2 O KP420437.1 2 152007 + chr19_KV575253v1_alt 1 24676 1 F AC245128.3 1 24676 + chr19_KV575253v1_alt 24677 166713 2 O KP420438.1 1 142037 + chr19_KV575254v1_alt 1 23296 1 F AC245128.3 1 23296 + chr19_KV575254v1_alt 23297 99845 2 O KP420443.1 1 76549 + chr19_KV575255v1_alt 1 27315 1 F AC245128.3 1 27315 + chr19_KV575255v1_alt 27316 161095 2 O KP420445.1 1 133780 + chr19_KV575256v1_alt 1 25774 1 F AC245128.3 1 25774 + chr19_KV575256v1_alt 25775 223118 2 O KP420440.1 1773 199116 + chr19_KV575257v1_alt 1 18586 1 F AC245128.3 1 18586 + chr19_KV575257v1_alt 18587 100553 2 O KU645198.1 2 81968 + chr19_KV575259v1_alt 1 28599 1 F AC245128.3 1 28599 + chr19_KV575259v1_alt 28600 171263 2 O KP420446.1 1 142664 + chr19_KV575260v1_alt 1 21944 1 F AC245128.3 1 21944 + chr19_KV575260v1_alt 21945 145691 2 O KP420444.1 1 123747 + chr19_KV575258v1_alt 1 50879 1 F AC245128.3 162731 213609 - chr19_KV575258v1_alt 50880 156965 2 O KP420441.1 1 106086 - chr22_KN196485v1_alt 1 44422 1 F AC213220.1 1 44422 - chr22_KN196485v1_alt 44423 56101 2 F AC254560.1 23532 35210 + chr22_KN196485v1_alt 56102 156562 3 F BX247885.11 32786 133246 + chr22_KQ458387v1_alt 1 38878 1 F AC235563.2 1 38878 + chr22_KQ458387v1_alt 38879 70727 2 F AC254788.1 9575 41423 + chr22_KQ458387v1_alt 70728 81319 3 F AC254638.1 29164 39755 + chr22_KQ458387v1_alt 81320 155930 4 F BX247885.11 58636 133246 + chr22_KQ458388v1_alt 1 41359 1 F AC225828.3 1 41359 + chr22_KQ458388v1_alt 41360 65134 2 F AC254847.2 15164 38938 + chr22_KQ458388v1_alt 65135 86891 3 F AC256292.1 15552 37308 + chr22_KQ458388v1_alt 86892 174749 4 F BX247885.11 45389 133246 + chr22_KN196486v1_alt 1 38537 1 F AC208162.3 1 38537 + chr22_KN196486v1_alt 38538 62689 2 F AC254995.1 12971 37122 + chr22_KN196486v1_alt 62690 76240 3 F AC254561.1 29337 42887 + chr22_KN196486v1_alt 76241 153027 4 F BX247885.11 56460 133246 + chr22_KQ759761v1_alt 1 39774 1 F AC255093.1 1 39774 + chr22_KQ759761v1_alt 39775 68462 2 F AC255556.1 1 28688 - chr22_KQ759761v1_alt 68463 145162 3 F BX247885.11 56547 133246 + chr22_KQ759762v1_fix 1 9350 1 F AC000050.22 98 9447 + chr22_KQ759762v1_fix 9351 48127 2 F AC255361.1 1 38777 + chr22_KQ759762v1_fix 48128 85417 3 F FO681507.3 2754 40043 + chr22_KQ759762v1_fix 85418 101037 4 F AC002056.1 26126 41745 + chrX_KV766199v1_alt 1 73350 1 F AC017047.4 105163 178512 - chrX_KV766199v1_alt 73351 113570 2 F AC209283.2 1 40220 + chrX_KV766199v1_alt 113571 188004 3 F AC017047.4 1 74434 - chrY_KN196487v1_fix 1 14353 1 O GQ222231.1 1 14353 + chrY_KN196487v1_fix 14354 34757 2 O GQ222230.1 2001 22404 + chrY_KN196487v1_fix 34758 101150 3 F AC025226.4 101674 168066 -