##maf version=1 scoring=roast.v3.3
a score=64734.000000
s hg38.chr14_KI270722v1_random        2 792 +   194050  
s nomLeu3.chr21                44084636 779 + 86207423  
i nomLeu3.chr21                N 0 C 0

a score=582824.000000
s hg38.chr14_KI270722v1_random       794 482 +    194050 tgaggtgctgggagggtgatactatgatatacttagaggtcatatggcagctttgtgccccttttcaccatacctggccctatgtgtctcttctatttgagagttcctgatttgtatcagacagtaactgtaagcaaagtgctttcttgggttctgtgcgccatgttagcaaattatagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcccacaactcctctctaatggtgg--gggggcagtcctgtgggcctgaaccctgaacttgtgggacctgatgctatctccagatagatagtctcaggattgaattgaattgtaggacaccatctggtgtcctgagagttgaaaaattgattggggtgagactaaatccacaaatttcatctcagaattttgagtagaaaTAATTCTGTtggaaaacattatcgttagatcaaaggtgtttata
s nomLeu3.chr21                 44085415 432 +  86207423 ----------------------------------------------------ttgtgccccttttcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaactgtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaattatagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcccacaactcgtctctaacggtggaggggggcagtcttgtgggcctgaaccctgaacttgtgggatctgaagctatctccagatagacagtctcaggattgaattgaattgtaggacaccagttggtgtcctgagagttgaagaattgattggggcgagactaaatccagaaagtagatctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcata
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445007 480 - 192599291 tgaggtgctgggagggtgacgcaatgatatgcccagagggcatatggcagtgacgtgccccttttcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacatataagcaaaacgctttcttgggttctgtgagccatcctagcacattatagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcccacagctggtctctaatgtc----gggggcagtcttgtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattgaattgaactgtaggacaccagttggtgtcctgagaattgaagaattggttggggtgagactaaatccacaaatttgatctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcata
i rheMac3.chr2                 N 0 C 0
s macFas5.chr2                 192283653 480 + 192460366 tgaggtgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttttcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacatataagcaaaacgctttcttgggttctgtgagccatcttagcacattatagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcccacagctggtctctaatgtc----gggggcagtcttgtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattgaattgaactgtaggacaccagttggtgtcctgagaattgaagaattggttggggtgagactaaatccacaaatttgatctcagaagtttGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcata
i macFas5.chr2                 N 0 C 0
s papAnu2.chr2                 187254744 480 - 187378091 TGAGGTGCTGGGAGGGTGACCCAATGATATGCCCAGAGGGCATATGGCAGCGACGTGCCCCTtttcaccatacctggccctatGTGTCTCTTCTATTTGACTGTTCCTGATTTGTATCAGACAGTACATATAAGCAGAATGCTTTCTTGGGTTCTGTGAGCCATCCTAGCACATTATAGAACCTGGGGAAGGAATCCATGGAAGTCCTAATTTCTAGCCAGTTGGTCAGGAGTATGGGAGGCCCACAGCTGGTCTCTAATGtc----gggggcagtcttgtgggactgaaccCTGAACtcgtgggatctgatgctatctccagatAGATAGCCTCAGGATTGAATTGAACTGTAGGACAGCAGTTGGTGTCCTGAGAGTTGAAGAATTGGTTGGGGTGAGACTAAATCCACAAATTTGATCTCAGAAGTTTGAATAGAAACAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGCTCATA
i papAnu2.chr2                 N 0 C 0
s chlSab2.chr22                101147856 480 + 101219884 tgaggtgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttttcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcatataagcaaaatgctttcttgggttctgtgagccatcctagcacattatcgaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcccacagctggtctctaatgtc----gggggcagtcttgtgggactgaaccctgaactcgtgggatctaatgctatctccagatagatagcctcaggattgaattgaattgtaggacaccagttggtgtcctgagagctgaagaattggttggggtgagactaaatctaaaaatttgatctcagaagtttgaatagaaacaattctgtttgaaaacattatcattagatcaaaggtattcata
i chlSab2.chr22                N 0 C 0

a score=108018.000000
s hg38.chr14_KI270722v1_random      1276 60 +    194050 gaactgagagatcaaaatggcaaagagtcatctatgattacacattgttgacataaacta
s gorGor3.chr3                 122125134 60 - 199944510 gaactgagagatcaagatgaaaaagagtcatctatgattacacattgttgacataaacta
i gorGor3.chr3                 N 0 I 11
s nomLeu3.chr21                 44085847 60 +  86207423 gaaccgagagatcaagatgacaaagagtcatctgtgatgacacattgttgacataaacta
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445487 60 - 192599291 gaactgagagaacaagatgacaaagagtcatctatgattatacattgttgacataaacta
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284133 60 + 192460366 gaactgagagaacaagatgacaaagagtcatctatgattatacattgttgacataaacta
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255224 60 - 187378091 GAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATACATTGTTGACATAAACTA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148336 60 + 101219884 gaactgagagaacaagatgacaaagagtcatctatgattatacattgttgacgtaaacta
i chlSab2.chr22                C 0 C 0

a score=14810.000000
s hg38.chr14_KI270722v1_random      1336 11 +    194050 gaattaagaca
s nomLeu3.chr21                 44085907 11 +  86207423 gaattgagaca
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445547 11 - 192599291 gaattaagaca
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284193 11 + 192460366 gaattaagaca
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255284 11 - 187378091 GAATTAAGACA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148396 11 + 101219884 gaattaagaca
i chlSab2.chr22                C 0 C 0
e gorGor3.chr3                 122125194 11 - 199944510 I

a score=74039.000000
s hg38.chr14_KI270722v1_random      1347 44 +    194050 agagtatgtcaaagagagttacattgagccagggataaaaatag
s gorGor3.chr3                 122125205 40 - 199944510 agagtatgtca----gagttacattgagccagggataaaaatag
i gorGor3.chr3                 I 11 I 4
s nomLeu3.chr21                 44085918 40 +  86207423 agagtatgtca----gagttacattgagccagggataaaaatag
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445558 44 - 192599291 agagtatgtcaaagagagttactttgagccagagataaaaatag
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284204 44 + 192460366 agagtatgtcaaagagagttactttgagccagagataaaaatag
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255295 44 - 187378091 AGAGTATGTCAAAGAGAGTTACATTGAGCCAGAGATAAAAATAG
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148407 44 + 101219884 agagtatgtcaaagagagttacattgagccagagataaaaatag
i chlSab2.chr22                C 0 C 0

a score=5595.000000
s hg38.chr14_KI270722v1_random      1391 4 +    194050 tcaa
s nomLeu3.chr21                 44085958 4 +  86207423 tcaa
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445602 4 - 192599291 tcaa
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284248 4 + 192460366 tcaa
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255339 4 - 187378091 TCAA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148451 4 + 101219884 tcaa
i chlSab2.chr22                C 0 C 0
e gorGor3.chr3                 122125245 4 - 199944510 I

a score=4011.000000
s hg38.chr14_KI270722v1_random      1395 2 +    194050 TC
s gorGor3.chr3                 122125249 2 - 199944510 TC
i gorGor3.chr3                 I 4 I 6
s nomLeu3.chr21                 44085962 2 +  86207423 TC
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445606 2 - 192599291 TC
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284252 2 + 192460366 TC
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255343 2 - 187378091 TC
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148455 2 + 101219884 TC
i chlSab2.chr22                C 0 C 0

a score=2120.000000
s hg38.chr14_KI270722v1_random      1397 2 +    194050 GA
s nomLeu3.chr21                 44085964 2 +  86207423 AA
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445608 2 - 192599291 AA
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284254 2 + 192460366 AA
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255345 2 - 187378091 AA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148457 2 + 101219884 AA
i chlSab2.chr22                C 0 C 0
e gorGor3.chr3                 122125251 6 - 199944510 I

a score=1911.000000
s hg38.chr14_KI270722v1_random      1399 1 +    194050 T
s gorGor3.chr3                 122125257 1 - 199944510 T
i gorGor3.chr3                 I 6 C 0
s nomLeu3.chr21                 44085966 1 +  86207423 T
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445610 1 - 192599291 T
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284256 1 + 192460366 T
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255347 1 - 187378091 T
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148459 1 + 101219884 T
i chlSab2.chr22                C 0 C 0

a score=2548.000000
s hg38.chr14_KI270722v1_random      1400 1 +    194050 T
s gorGor3.chr3                 122125258 1 - 199944510 T
i gorGor3.chr3                 C 0 I 2958
s nomLeu3.chr21                 44085967 1 +  86207423 T
i nomLeu3.chr21                C 0 I 4
s rheMac3.chr2                 192445611 1 - 192599291 T
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284257 1 + 192460366 T
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255348 1 - 187378091 T
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148460 1 + 101219884 T
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75493531 1 +  98207768 T
i mm10.chr16                   N 0 C 0

a score=145623.000000
s hg38.chr14_KI270722v1_random      1401  96 +    194050 GATTAGAATTTAGTAAATGCTATTTTTTGAAAAATTAATCTTTACTTAATTAATGGAGATA----CTTAATTATTTCCA--TTTAGACTTTAAATTTATAAC----------
s panTro4.chr3                 125084650 102 - 202329955 gattagaaTTTAGTAAATGCTATTTTTAAAGACATTAATCTTTACTTAATTAATGGAGATAATTACTTAATTATCTCCA--TTTTGACTTTAAATTTATAAC--------TA
i panTro4.chr3                 N 0 C 0
s nomLeu3.chr21                 44085972  93 +  86207423 GGTTAGTATTTAGTAAATGCTATTTTTTAAAAAATTAATCTTTACTTAATTGAGGGAGATA--------ATTATCTCCA--TTTTGACTTTAAATTTGTAAC--------T-
i nomLeu3.chr21                I 4 C 0
s rheMac3.chr2                 192445612 101 - 192599291 GATTAGAATTTAGTAAATACTATTT-AAAAAACATTAATCTTTACTTAATTAGTGGAGATAATTACTTAATGATCCCCA--TTTTGACTTTAAATTTATAAC--------TA
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284258 101 + 192460366 GATTAGAATTTAGTAAATACTATTT-AAAAAACATTAATCTTTACTTAATTAGTGGAGATAATTACTTAATGATCCCCA--TTTTGACTTTAAATTTATAAC--------TA
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255349 101 - 187378091 GATTAGAATATagtaaatactattt-aaaaaacattaatcttTACTTAATTAGTGGAGATAATTACTTAATGATCCCCA--TTTTGACCTTAAATTTATAAC--------TA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148461 102 + 101219884 GATTAGAATTTAGTCAATACTATTTAAAAAAACATTAATCTTTACTTAATTAGTGGAGATAATTACTTAATGATCCCCA--TTTTGACTTTAAATTTATAAC--------TA
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75493532 100 +  98207768 GACAGAGGTTCAGTAAAGGAGGTTT-CAAAATTAT---------CTTAAGaaattaaaata--tatatatttatttttaatttttaaacttaaaaatatatCATGATACCCA
i mm10.chr16                   C 0 C 0
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=690693.000000
s hg38.chr14_KI270722v1_random      1497 321 +    194050 AAAAATTACTATTTTA-------TCTATTT--------TCCATAAATGGAA---ATTGAAATAACAATAGCAAAA----TGCTTCGACAGAAA-ATCTGCCCTTCTTATTCCCAAGAGGAAGAATGGCCAACTACCTTAAGCAAAAAGTTAGAAAAACTTTCATAATTTTTTAAGTTGCCATATTTTAT-AGCTTTGAACAAGTTGAATTATTAACTAG-ACTGCTCAG-GGAATGGAGC----CATC----TAATATAATTTCCTTACTATTTAGAT-AAAATCTTTGTTGTTGAAAATCTTAATCAT-TTTTAATGATCCTGTTTTCAGAGACTGATATTAATGATTCGTGACAC--
s panTro4.chr3                 125084752 312 - 202329955 AAAAATTGCTATTTTA-------TCTATTT--------CCCATAAATGGAA---ATTGAAA-AGCAGTAGCAAAA----TGCTTCGACAGAAA-ATCTGCCCTTTTTATTCTCAAGAGGAAGAATGGCC-------TTAAGCACAAAGTTAGAAAAACTTTCATAATTTTTTAAGTTGCCATATTTTAT-AGCTTTGAACAAGTTGAATTGTTAACTAG-TCTGCCCAG-GGAATGGAGC----CCTC----TAATATAATTTCCTTACTATTTAGAT-AAGATCTTTGTTGTTGAAAATCTTAATC-T-TTTTAATGATCCTGTTTTCAGAGCCTGATATTAATGATTCATGAAAC--
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44086065 319 +  86207423 AAAAATTGCTATTTTA-------TCTATTT--------CTCATAAATGGAA---ATTGAAA-AACAATAGCAAAA----TGCTTCGACAGGAA-ATCTGCCCTTTTTATTCCCAAGAGGAAGAATGGACAAATACCTTAAGCACAAAGTTAGAAAAACTTTCATAATTTTTTAAGTTGCCATATGTTAT-AGCTTTGAACAAGTTGAATTGTTAACTAG-ACTGCCCAG-GGAATCGA-C----CATC----TAATATAATCTCCTTACTATTTAGAT-AAGATCTTTGGTGTTGAAAATCGTAATAAT-TTTTAACAATCTTGTTTTCAGAGACTGATATTTATGATTTGTGAAAC--
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192445713 320 - 192599291 AAAAATTGCTATTTTA-------TCTATTT--------CCCATAAATGGAA---ATTGAAA-AGCAATAGCAAAA----TGCTTTAACAGAAA-ATCTGCCCTTTTTCTTCCCAAAAGGAAGAATGGCCAACCACCTTAAGCACAAAGTTAGAAAAACTTTCATAATTTTTTAAGTTGCCATATTTTAT-AGCTTTGAACAAGTTGAGTTGTTAACTAG-ACTGCCCAG-GGAATGCAGC----CCTC----TCATATAATTTCCTTACTATTTAGAT-AAGATCTTTCTTGTTGAAAATCTTAATCTT-TTTTAATGATCCTGCTTTCAGAGCCTGGTATTAATGATTCATGAAAC--
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284359 320 + 192460366 AAAAATTGCTATTTTA-------TCTATTT--------CCCATAAATGGAA---ATTGAAA-AGCAATAGCAAAA----TGCTTTGACAGAAA-ATCTGCCCTTTTTATTCCCAAGAGGAAGAATGGCCAACCACCTTAAGCACAAAGTTAGAAAAACTTTCATAATTTTTTAAGTTGCCATATTTTAT-AGCTTTGAACAAGTTGAGTTGTTAACTAG-ACTGCCCAG-GGAATGCAGC----CCTC----TCATATAATTTCCTTACTATTTAGAT-AAGATCTTTCTTGTTGAAAATCTTAATCTT-TTTTAATGATCCTGTTTTCAGAGCCTGATATTAATGATTCATGAAAC--
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255450 320 - 187378091 AAAAATTGCTATTTTA-------TCTATTT--------CCCATAAATGGAA---ATTGAAA-AGCAATAGCAAAA----TGCTTTGACAGAAA-ATCTGCCCTTTTTATTCCCAAGAGGAAGAATGGCCAACCACCTTAAGCACAAAGTTAGAAaaactttcataattttttaagttgCCATATTTTAT-AGCTTTGAACAAGCTGAATTGTTAACTAG-ACTGCCCAG-GGAATGCAGC----CCTC----TAATATAATTTCCTTACTATTTAGAT-AAGATCTTTCTTGTTGAAAATCTTAATCTT-TTTTAATGATCCTGTTTTCAGAGCCTGATATTAATGATTCATGAAAC--
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148563 320 + 101219884 AAAAATTGCTATTTTA-------TCTATTT--------CCCATAAATGGAA---ATTGAAA-AGCAATAGCAAAA----TGCTTTGACAGAAA-ATCTGCCCTTTTTATTCCCAAGAGGAAGAATGGCCAACCACCTTAAGCACAAAGTTAGAAAAACTTTCATAATTTTTTAAGTTGCCATATTTTAT-AGCTTTGAACAAGTTGAATTGTTAACTAG-ACTGCCCAG-GGAATGGAGC----CCTC----TAATATAATTTCCTTACTATTTAGAT-AAGATCTTTCTTGTTGAAAATCTTAATCTT-TTTTAATGATCCTGTTTTCAGAGCCTGATATTAATGATTCACAAAAC--
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75493632 320 +  98207768 AAGCATGCCCACTCCA---------GATCT--------CTCAAGAAACAAAAATATTAAAA-CATAAAAGGAAAAAATGTGCTTTGCTTAGTA-ATCTCCCTTTTTATTTTGTGGAAAGAAAAAT--------ATATTAAGCAGAAAACTAAAAGAATTTCCAT-ATAATTTTAGCTATTGTATTTTAT-AATACTGAAAAAGCTGAACTG--AACCAG-AGAGCATAGAGGAATAAAGTCTTGCATT----TAATATCATGTTCTTGCTATTAATAA-ATGGCAATCCCTGTTAAAAATCTTAAACATACTCTGAAAACTGTGTTTTCAAAGGCTGGCATTGATGATTCATAGGAT--
i mm10.chr16                   C 0 C 0
s canFam3.chr31                 11095479 323 +  39895921 AAAAATGACTACTTTAAGTCATCCCCATTTCAGATCTCCCCAGAAATAGAA---ATTGGAA-AACAACAGCAAGA----GGCTTTGACAGAAATATCTGCCCTTTTAATTTCCAGGAGAAAGTAT-------------AGACACAAAGTTAGAAGAA-TTCTATAATTATTT--GTTGTCATATTTTATAAACATTGAGCAAGCTGAATTGTGAACCAGAACTGCCTGG-TGGCTAGAGT----CCTCTGTTTAATAGAATT---TGACTATTTAGACAAAAATCTTTGTTGTTAAAAATCTTATCTTC-CTTTGGTAATTCAGCTTCCAGAGCCTGATAC---TGATTCATGTAACTC
i canFam3.chr31                N 0 C 0
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=3719.000000
s hg38.chr14_KI270722v1_random      1818 2 +    194050 TA
s panTro4.chr3                 125085064 2 - 202329955 TC
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44086384 2 +  86207423 TC
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192446033 2 - 192599291 TC
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284679 2 + 192460366 TC
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255770 2 - 187378091 TC
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148883 2 + 101219884 TC
i chlSab2.chr22                C 0 C 0
s otoGar3.GL873528              18013216 2 -  38779656 TT
i otoGar3.GL873528             N 0 I 9948
s mm10.chr16                    75493952 1 +  98207768 -C
i mm10.chr16                   C 0 I 3
s canFam3.chr31                 11095802 2 +  39895921 TT
i canFam3.chr31                C 0 C 0
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=1036082.000000
s hg38.chr14_KI270722v1_random      1820 489 +    194050  
s panTro4.chr3                 125085066 489 - 202329955  
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44086386 488 +  86207423  
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192446035 488 - 192599291  
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192284681 488 + 192460366  
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187255772 488 - 187378091  
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101148885 488 + 101219884  
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75493956 502 +  98207768  
i mm10.chr16                   I 3 C 0
s canFam3.chr31                 11095804 463 +  39895921  
i canFam3.chr31                C 0 I 836
e otoGar3.GL873528              18013218 9948 -  38779656 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=129545.000000
s hg38.chr14_KI270722v1_random      2309 54 +    194050 CAAAATCTAAATAGAAGCCAGTTGGTAATTCCAAGATAATAGTATGAAGACAAA
s panTro4.chr3                 125085555 54 - 202329955 CAAAATCTAAATAGAAGCCAGTTGGTAATTCCAAAATAATAGTATGAAGACAAA
i panTro4.chr3                 C 0 I 1
s nomLeu3.chr21                 44086874 54 +  86207423 CAAAATCTAAATAGAAGCCAGTTAGTAATTCCAAGATAGTAGTATGAAGACAAA
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192446523 54 - 192599291 CAAAATCTAAATAGAAGGCAGTTGGTAATTCCAAGATAGTAGTATGAAGACAAA
i rheMac3.chr2                 C 0 I 1
s macFas5.chr2                 192285169 54 + 192460366 CAAAATCTAAATAGAAGGCAGTTGGTAATTCCAAGATAGTAGTATGAAGACAAA
i macFas5.chr2                 C 0 I 1
s papAnu2.chr2                 187256260 54 - 187378091 gaaaatttaaatagaagGCAGTTGGTAATTCCAAGATAGTAGTATGAAGACAAA
i papAnu2.chr2                 C 0 I 1
s chlSab2.chr22                101149373 54 + 101219884 CAAAATCTAAATAGAAGGCAGTGGGTAATTCCAAGATAGTAGTATGAAGACAAA
i chlSab2.chr22                C 0 I 1
s mm10.chr16                    75494458 54 +  98207768 TAAAATCTGCATAGATGTAAACTTGCAACCATAAGAAAATGCTATCAAAATGAA
i mm10.chr16                   C 0 I 197
s canFam3.chr31                 11097103 54 +  39895921 caacatcTGAATAGAAACCATTTGGCAACTGTAAAACATTAGTATGAAAATAAA
i canFam3.chr31                I 836 C 0
e otoGar3.GL873528              18013218 9948 -  38779656 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=3053373.000000
s hg38.chr14_KI270722v1_random      2363 1366 +    194050  
s panTro4.chr3                 125085610 1371 - 202329955  
i panTro4.chr3                 I 1 C 0
s nomLeu3.chr21                 44086928 1363 +  86207423  
i nomLeu3.chr21                C 0 I 297
s rheMac3.chr2                 192446578 1383 - 192599291  
i rheMac3.chr2                 I 1 C 0
s macFas5.chr2                 192285224 1383 + 192460366  
i macFas5.chr2                 I 1 C 0
s papAnu2.chr2                 187256315 1383 - 187378091  
i papAnu2.chr2                 I 1 C 0
s chlSab2.chr22                101149428 1384 + 101219884  
i chlSab2.chr22                I 1 C 0
s mm10.chr16                    75494709 1364 +  98207768  
i mm10.chr16                   I 197 C 0
s canFam3.chr31                 11097157 1347 +  39895921  
i canFam3.chr31                C 0 C 0
e otoGar3.GL873528              18013218 9948 -  38779656 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=201550.000000
s hg38.chr14_KI270722v1_random      3729 110 +    194050 TAAAATTGTCTTTTT-AAAAAAGAAATCAAAACAGACAAGTGGGCAATGAGTTATGGATACTATTAT-AGGGTACCCTGATAAACTACTAAGAAGACGACTTTTGGTACCGA
s panTro4.chr3                 125086981 107 - 202329955 TAAAATTGTCTTTTT-AAAGAAG---TCAAAATAGACAAGTGGGCAATGAGTTATGGATACTATTAT-AGGGTACCCTGATAACCTAGTAACAGGAAGACTTTTGGTACTGA
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44088588 110 +  86207423 TAAAATTGTCTTTTT-AAAAAAGAAATCAAAACAGACAAGTGGGCAATGAGTTATGGATACTATTAT-AGGGTACCCCGATAACCTAGTAACAAGAAGACTTTTGGTACCGA
i nomLeu3.chr21                I 297 C 0
s rheMac3.chr2                 192447961 102 - 192599291 TAAAATTGTCTTTTT-AAAAAAGAAATCAAAACGGACAAGTGGGCAATGAGTTATGGACACCATTAC-AGGGTACCCTGATAAC--------ATGAAGACTTTTGGTACCGA
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192286607 102 + 192460366 TAAAATTGTCTTTTT-AAAAAAGAAATCAAAACGGACAAGTGGGCAATGAGTTATGGATACCATTAC-AGGGTACCCTGATAAC--------ATGAAGACTTTTGGTACCAA
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187257698 102 - 187378091 taaaattgtcttttt-aaaaaagaaatcaaaacggACAAGTGGGCAATGAGTTATGGATACCATTAC-AGGGTACCCTGATAAC--------ACGAAGACTTTTGGTACCGA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101150812 103 + 101219884 TAAAATTGTCTTTTTAAAAAAAGAAATCAAAACGGACAAGTGGGCAATGAGTTATGGATACTATTAC-AGGGTACCCTGATAAC--------ACGAAGACTTTTGGTACCGA
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75496073  83 +  98207768 TAAAATT---------AAAGAAAAAAT--------AGAAGGTTCCAATGAGT-----------GTAT-TGAATACTCTAATAAcctaacaataaggagtgatttggaattga
i mm10.chr16                   C 0 I 3784
s canFam3.chr31                 11098504 102 +  39895921 TAAAATTGTCTTTTA-AAAAAGAGAA---------ATAATTGGACACCCAATTATGGGCACTGTGGTAAGAGTACCCTGGTAACCTGGTACCAATAGGGGCTTTGGTACTAA
i canFam3.chr31                C 0 C 0
e otoGar3.GL873528              18013218 9948 -  38779656 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=488074.000000
s hg38.chr14_KI270722v1_random      3839 257 +    194050 AAATTCCAATTAACCACATGCCTCCATTAAGG-------CCATGATCACTGCCAATTTTTACACACAAAGGCTGGAGCTAGAA------TTATATGGAATTCCATATGTATCTAAACCATAGATTTATCAATTATCAC-TGAAACACAACTTGGAGGACACTATCCAGAATTTGTAGGGCTTGGCCTTATTCTAGAGAAACATACACTAGAATAGGCA----------------GTTG-GATTTTA-----------AATTCAGTCTTAAATCTGTTGAAAATAATGCA-TTTTT-TTCTC
s panTro4.chr3                 125087088 256 - 202329955 AAATTCCAATTAGCCATGTGCCTCCATTAAGA-------CCATGATTACTGCCAATTTTTACTCACAAAGGCAGGAGCTAGAG------TTATATGGAATCCCATATGTACCTAAACTATAGATTTATCAATTATCACCTAAAACACAACTTGGAGGACACTATCCGGAATTTGTAGGGCTTGGCCTTATTCTGGAGAAACATACACTGGAATAGGCA----------------CTTG-GATTTTA-----------AATTCAATCTTAAATCTCTTAAAAATGATGCA-ATTTT---CTG
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44088698 256 +  86207423 AAATTCCAATTAACCACACGCCTGCATTAAGG-------CCATGGTCACTGCCAATTTTTACTCGCAAAGGCTGGAGCTAGAG------TTATACGGAATTCCATAAGTATCTAAACCATAGATTTATCAATTATTAC-TTAAACACAACTTGGAGGACACTCTCCAGAATTT-TAGGGCTTGGCCTTATTCTAGAGAAACATACACTGGAATAGGCA-----------------TTG-GATTTTA-----------AATTCAATCTTAAATCTCTTGAAAATGATGCA-TTTTTTTTCTG
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448063 257 - 192599291 AAATTCCACTTAGCCACATACCTCCACTAAGG-------CCACGATTACTGCCAATTTTTACTTGCAAAGACTGGAGCTAGAG------TTATATGGAATTCCATATGTATCTAAACCATAGATCTGTCAATTATCAC-TTAAACACAACTTGGAGGACACTATCCAGAATTTGTGGGGCTTGGCCTTATTCTGGAGAAACATCCACTGGAATAGGCA----------------GTTG-GATTTTA-----------AATTCAATCTTAAATCTCTTGAAAATGATGCA-TTTTT-TTCTG
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192286709 257 + 192460366 AAATTCCACTTAGCCACATACCTCCACTAAGG-------CCACGATTACTGCCAATTTTTACTTGCAAAGACTGGAGCTAGAG------TTATATGGAATTCCATATGTATCTAAACCATAGATCTGTCAATTATCAC-TTAAACACAACTTGGAGGACACTATCCAGAATTTGTGGGGCTTGGCCTTATTCTGGAGAAACATCCACTGGAATAGGCA----------------GTTG-GATTTTA-----------AATTCAATCTTAAATCTCTTGAAAATGATGCA-TTTTT-TTCTG
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187257800 258 - 187378091 AAATTCCAATTAGCCACATACCTCCACTAAGG-------CCACGATTACTGCCAATTTTTCCTTGCAAAGACTGGAGCTAGAG------TTATATGGAATTCCATATGTATCTAAACCATAGATCTGTCAATTATCAC-TTAAACACAACTTGGAGGATACTATCCAGAATTTGTGGGGTTTGGCCTTATTCTGGAGAAACATCCACTGGAATAGGCA----------------GTTGAGATTTTA-----------AATTGAATCTTAAATCTCTTGAAaatgatgca-ttttt-ttctg
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101150915 258 + 101219884 AAATTCCAGTTAGCCACATACCTCCACTAAGG-------CCATGATTACTGCCAATTTTTACTTGCAAAGACTGGAGCTAGAG------TTATATGGAATTCCATATGTATCTAAACCATAGATTTGTCAATTATCAC-TTAAACACAACTTGGAGGACACTATCCAGAATTTGTGGGGCTTGGCCTTATTCTGGAGAAACATCCACTGGAATAGGCA----------------GTTG-GATTTTA-----------AATTCAATCTGAAATCTCTTGAAAATGATGCATTTTTT-TTCTG
i chlSab2.chr22                C 0 C 0
s canFam3.chr31                 11098606 294 +  39895921 AAAGCCTAGTTAGCCACTTGTCT-CATGAAGGTCAGTCATCATTGTTGCCACCAATTTTTACTCAAAAAGGCAAGTGGTAGATAAAGACTGATGTGGAATCTCATGGGTATTAAAACCAGAGATTCACCAATTCTTAC-TTAAAGCTGACTTAGATTATACTATCTAGAGGTTGAAAAGTTTGGCC---TTCTATAGAAGCTTCCACTAAGATAAGCAGGCCCCTCTGGAGACTGTTATGATTTTGACATTTAAGGCAGTTTACTCTTAAATATCTTGAAAATGATACA-CAttc-ttttt
i canFam3.chr31                C 0 I 236
e otoGar3.GL873528              18013218 9948 -  38779656 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=362443.000000
s hg38.chr14_KI270722v1_random      4096 167 +    194050 AGAGATGAGACATTGTTCAACTCTTTTGACTTATTTTAGATTTGATATTATACAGTTCAAACACCATGGAGATTTACTAATCTGAATGAACACATACCAAATTAGTCTTTGCTCCAGTCTCAAAATCTGAGATTAATTCTGGCTGCTGAAGAAATTTTCCAGTGTTA
s panTro4.chr3                 125087344 167 - 202329955 AGAGATGAGAAATTGTCCGACTCTCTTGGCTTATTTTAGATTTGATATTATACAGTTCAAACACCAGGGAGATTTACTTATCTGAATGAACACATACCAAATTAGTCTTTGCTCCAGTCTCAAAATCTGAGATTAATTCTGGCAGCTGAATAAATTTTCCAGGGTTA
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44088954 167 +  86207423 AGAGATGAGAAATCCTTCAACTCTCTTGGCTTATTTTAGATTTGATATTATACAGCTCGAACACCATGGAGATTTACTAATCTAAATGAACACATACCAAATTAGTCTTTGCTCCAGTCTTAAAATCTGAGATTAATTCTGGCAGCTGAAGAAATTTTCCAGGGTTA
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448320 167 - 192599291 AGAGACGAAAAATTGTCCAACTCTCTTGGCTTATTTTAGATTTGATATTATACAGTTCGAACACCATGGAGATTTACTAATCTGGATGAACACATACCAAATTAGTCTTTGCTCCAGTCTCAAAATCTGAGATTAATCCTGGGAGCTGAAGAAATTTTCCAGGGTTA
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192286966 167 + 192460366 AGAGATGAAAAATTGTCCAACTCTCTTGGCTTATTTTAGATTTGATATTATACAGTTCGAACACCATGGAGATTTACTAATCTGGATGAACACATACCAAATTAGTCTTTGCTCCAGTCTCAAAATCTGAGATTAATCCTGGGAGCTGAAGAAATTTTCCAGGGTTA
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258058 167 - 187378091 agagacGAAAAATTGTCCAACTCTCTTGGCTTATTTTAGATTTGATATTATACAGTTCGAACACCATGGAGATTTACTAATCTGGATGAACACATACCAAATTAGTCTTTGCTCCAGTCTCAAAATCTGAGATTAATCCTGGGAGCTGAAGAAATTTTCCAGGGTTA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151173 167 + 101219884 AGAGATGAAAAATTGTCCAACTCTCTTGGCTTATTTTAGATTTGATATTATACAGTTCGAACACCATGGAGATTTACTAATCTGGATGAACACATACCAAATTAGTCTTTGCTCCAGTCTCAAAATCTGAGATTAATCCTGGGAGCTGAAGAAATTTTCCAGGGTTA
i chlSab2.chr22                C 0 C 0
s canFam3.chr31                 11099136 167 +  39895921 AGAGAGCAGAAATTATCCAATTCTCTTAGACTATTCGAGATTTTATTTTTTACAATTGAAATGCCAAATTACTTTATTATTATGGATGAAAATATACCAAATTAGCCTTTGTTCCAATCTCAAAATTTGGGATAACTCCTGGCAGCTGGAGAATTGTTACATGGTTA
i canFam3.chr31                I 236 C 0
e otoGar3.GL873528              18013218 9948 -  38779656 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=7842.000000
s hg38.chr14_KI270722v1_random      4263 5 +    194050 GGGGT
s panTro4.chr3                 125087511 5 - 202329955 GGAGT
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089121 5 +  86207423 GCAGT
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448487 5 - 192599291 GGAGT
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287133 5 + 192460366 GGAGT
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258225 5 - 187378091 GGAGT
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151340 5 + 101219884 GGAGT
i chlSab2.chr22                C 0 C 0
s tarSyr2.KE939969v1              324031 4 +    345090 GGAA-
i tarSyr2.KE939969v1           N 0 I 9086
s canFam3.chr31                 11099303 5 +  39895921 GGGAT
i canFam3.chr31                C 0 C 0
e otoGar3.GL873528              18013218 9948 -  38779656 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=218803.000000
s hg38.chr14_KI270722v1_random      4268 105 +    194050 ATGCTTCAATGCTGGTGACTGGTACTACTTTCTGGTAAACTATAGATGA---CATGTGCGCTTTCATTGCCTAAACTCACTTTGTAGAACACCATTAAATGAAAATCA
s panTro4.chr3                 125087516 105 - 202329955 ACGTTTCAACACTGGTGACCGGTACTACTTTCTGGTAAACTATAGAGGA---CATGTGCCCTTTCACTGCCTAAACTCACTTTGTAGAACACCATTAAATGAAAATCA
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089126 105 +  86207423 ATGCTTCAATGCTGGTGACCAGTACTACTTTCTGGTAAACTATAGATGA---CATGTGCCCTTTCACTGCCTAAACTCACTTTGTAGAACACCGTTAAATGAAAATCA
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448492 105 - 192599291 ATGCTTCTACGCTGGTGACCAGTACTACTTTCTGGTAAACTATATATGA---CATGTGCCCTTTCACTGCCTAAACTCACTTTGTAGAACACCATTAAATGAAAATCA
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287138 105 + 192460366 ATGCTTCTACGCTGGTGACCAGTACTACTTTCTGGTAAACTATATATGA---CATGTGCCCTTTCACTGCCTAAACTCACTTTGTAGAACACCATTAAATGAAAATCA
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258230 105 - 187378091 ATGCTTCTACGCTGGTGACCAGTACTACTTTCTGGTAAACTACGTATGA---CATGTGCCCTTTCACTGCCTAAACTCACTTTGTAGAACaccattaaataaaaatca
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151345 105 + 101219884 ATGCTTCTACGCTGGTGACCAGTACTACTTTCTGGTAAACTATATATGA---CATGTGCCCTTTCACTGCCTAAACTCACTTTGTAGAACACCATTAAATGAAAATCA
i chlSab2.chr22                C 0 C 0
s canFam3.chr31                 11099308 106 +  39895921 ATACATTCAAGTT--TGATGATTGTCAGTTTCTAATAAACTACAGATGATGGCATATACCTGTTTGTCACCTAAACTCACTTTCTAAACCACTGTTAAATGAAAATCA
i canFam3.chr31                C 0 I 5
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=7236.000000
s hg38.chr14_KI270722v1_random      4373 4 +    194050 TCAC
s panTro4.chr3                 125087621 4 - 202329955 TTAc
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089231 4 +  86207423 TCAc
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448597 4 - 192599291 TCAc
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287243 4 + 192460366 TCAc
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258335 4 - 187378091 tcac
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151450 4 + 101219884 TCAc
i chlSab2.chr22                C 0 C 0
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414 5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122125259 2958 - 199944510 I

a score=223.000000
s hg38.chr14_KI270722v1_random      4377 1 +    194050 A
s panTro4.chr3                 125087625 1 - 202329955 c
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122128217 1 - 199944510 a
i gorGor3.chr3                 I 2958 I 2024
s nomLeu3.chr21                 44089235 1 +  86207423 c
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448601 1 - 192599291 c
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287247 1 + 192460366 c
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258339 1 - 187378091 c
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151454 1 + 101219884 c
i chlSab2.chr22                C 0 C 0
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414 5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I

a score=468333.000000
s hg38.chr14_KI270722v1_random      4378 275 +    194050 agcaatttgggaggctaaggtgggcagatcatttgaggtcaggtgtttgagaccagcctggccaacatgatgaaaccccgtctctactgaaaatacaaaaacttatccaggcatggcgggatgcacctggaatcccagctacttgggaggctgaggcagaaaaatcgcctgaacccaggatgtgaaggttgcagtgaacagagacgttgccattgcactccagcctgggcaacagagtgagacttcatctccaaaaaaaggaaaaaaaagagaga
s panTro4.chr3                 125087626 270 - 202329955 agcactttgggaggctaaggcgggcagatcatttgaggtcgggagtttgagaccagcctggccaacatgatgaaaccccatctctactgaaaatagaaaaacttatccaggcatggtgggatgcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcctgaacccaggatgtgaaggttacagtgaacagagatgttgccattgcactccagcctgggcaacagagcgagacttcatctccaacaaaaggaaaaaaaa-----a
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089236 275 +  86207423 agcactttgggaggctacgacgggcagatcattggaggtcaggagtttgagaccagcctggccaacacgatgaaaccccatctctactgaaaatacaaaaacttatccaggcatggtgggatgcacctgtaaccccagctacctgggaggctgaggcaggagaatcgcctgaacccaggatgtgaaggttgcagtgaacagagatgttgccattgcactccagcctgggcaacagagcaaggcttcatctcaaaaaaaaaggaaaaataaaGAGA
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448602 274 - 192599291 aacactttgggaggctgaggcgggcagatcatttgagctcaggagatcaagatcagcctggccaacatgatgaaaccacatctctactaaaaatacaaaaacttatccaggcatggtgggatacacctggaatccctgccactggggaggctgaggcaggagaatcacgtgaacccaggatgtggaggttgcagtgaacagagatgttgcccttgcactccagcctgggcaacagagcgagacttcatctcaaaaaaaaggaaaaaaaaaaGAG-
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287248 274 + 192460366 aacactttgggaggctgaggcgggcagatcatttgagctcaggagatcaagatcagcctggccaacatgatgaaaccacatctctactaaaaatacaaaaacttatccaggcatggtgggatacacctgtaatccctgccactggggaggctgaggcaggagaatcacctgaacccaggatgtggaggttgcagtgaacagagatgttgcccttgcactccagcctgggcaacagagcgagacttcatctcaaaaaaaaggaaaaaaaaaaGAG-
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258340 273 - 187378091 aacactttgggaggctgaggcgggcagatcatttgagctcaggagatcaagatcagcctggccaacatgatgaaactccatctctactaaaaatataaaaacttatccaggcatggtgggatacacctgtaatccccgccactggggaggctgaggcaggagaatcacctgaacccaggatgtggaggttgcagtgaacagagatgttgcccttgcactccagcctgggcaacagagcgagacttcatctcaaaaaaaagg-aaaaaaaaagag-
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151455 272 + 101219884 aacactttgggaggctgaggcaggcagatcatttgagctcaggagatcgagatcagcctggccaacatgatgagaccccatctctactaaaaatacaaaaacttatccaggcatggtgggatacacctgtaatccctgccactggggaggctgaggcaggagaatcacctgaacccaggatatggaggttgcagtgaacacagatgttgcccttgcactccagcctgggcaacagagcgagacttcatctcaaaaaaaagg--aaaaaaaagag-
i chlSab2.chr22                C 0 C 0
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414   5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=5075.000000
s hg38.chr14_KI270722v1_random      4653 3 +    194050 aaG
s panTro4.chr3                 125087896 3 - 202329955 gag
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19568799 3 -  19803153 gag
i panPan1.JH650580             N 0 I 39
s nomLeu3.chr21                 44089511 3 +  86207423 GAG
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448876 2 - 192599291 -AG
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287522 2 + 192460366 -AG
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258613 2 - 187378091 -ag
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151727 2 + 101219884 -ag
i chlSab2.chr22                C 0 C 0
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414 5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=53364.000000
s hg38.chr14_KI270722v1_random      4656 39 +    194050 AGAGAAATAAAATTATCAGTGTTCAGTGACTCTTTTTTT
s panTro4.chr3                 125087899 39 - 202329955 agagaaaGAAAATTATCAGTGTTCAGTGACTCTTTTTTT
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089514 36 +  86207423 ---AGAAGAAAATTATCAGTGTTCAGTGACTTTTTTTTT
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448878 34 - 192599291 AGAGAAAGAAAATTATCAGTGTTCAGTGACTCTT-----
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287524 34 + 192460366 AGAGAAAGAAAATTATCAGTGTTCAGTGACTCTT-----
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258615 34 - 187378091 agagaaagaaaattatctgtGTTCAGTCACTCTT-----
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151729 34 + 101219884 agagaaaGAAAATTATCAGTGTTCAGTGACTCTT-----
i chlSab2.chr22                C 0 C 0
e panPan1.JH650580              19568802 39 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414  5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=546.000000
s hg38.chr14_KI270722v1_random      4695 1 +    194050 T
s panTro4.chr3                 125087938 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19568841 1 -  19803153 t
i panPan1.JH650580             I 39 I 3367
s nomLeu3.chr21                 44089550 1 +  86207423 T
i nomLeu3.chr21                C 0 C 0
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414 5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I
e chlSab2.chr22                101151763 0 + 101219884 C
e papAnu2.chr2                 187258649 0 - 187378091 C
e macFas5.chr2                 192287558 0 + 192460366 C
e rheMac3.chr2                 192448912 0 - 192599291 C

a score=2438.000000
s hg38.chr14_KI270722v1_random      4696 26 +    194050 CATGCTGATAAACTATTACACAGAAA
s panTro4.chr3                 125087939 26 - 202329955 CATGCTGATAAACTATTACACAGAAA
i panTro4.chr3                 C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099414  5 +  39895921 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I
e chlSab2.chr22                101151763  0 + 101219884 C
e papAnu2.chr2                 187258649  0 - 187378091 C
e macFas5.chr2                 192287558  0 + 192460366 C
e rheMac3.chr2                 192448912  0 - 192599291 C
e nomLeu3.chr21                 44089551  0 +  86207423 C

a score=195390.000000
s hg38.chr14_KI270722v1_random      4722 101 +    194050 AAGAAAATTTTCATGCTGATAAACTATTACACAGAAAAAGAAATGTATCCATTATGGACAATTAAAAGGGCTATACAACCTCTCTCATTGTATGATTCTGG
s panTro4.chr3                 125087965 101 - 202329955 AAGAAAATTTTCATGCTGATAAACTATTACACAGAAAAAGAAATGTATACATTATGGACAATTAAAAGGGCTATACAACCTCTCTCATTGTGTGATTCTGG
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089551  91 +  86207423 ----------TCATGCTGATAAACTACTACACAGAAAAAGAAATGTATCCATTATGGACAATTAAAAGGGCTATACAACCTCTCTCATTGTATGATTCTGG
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192448912  94 - 192599291 -------TTTCCATGCTGATGAACTATTATATAGAAAAAGAAATGGATCCATTATGGACAATTAAAAGGGCTACACAACCTCTCTCATTGTTTGATTCTGG
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287558  94 + 192460366 -------TTTCCATGCTGATAAACTATTACATAGAAAAAGAAATGGATCCATTATGGACAATTAAAAGGGCTACACAACCTCTCTCATTGTTTGATTCTGG
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258649  94 - 187378091 -------TTTTCATGCTGATAAACTAttacatagaaaaagaaatggatcCATTATGGACAATTAAAAGGGCTACACAACCTCTCTCATTGTTTGATTctgg
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101151763  94 + 101219884 -------TTTTCATGCTGATAAACTATTACATAGAAAAAGAAATGGATCCATTATGGACAATTAAAAGGACTACACAACCTCTCTCATTGTTTGATTCTGG
i chlSab2.chr22                C 0 C 0
s canFam3.chr31                 11099419  99 +  39895921 GAAAAACTATTTTTAATGACAAACTATTACACAGAAAAAGAAGTGTGTCCATTCTGGACACCTGAAAAGAATATATAAC--TTCTTATTATAAAATTTTGG
i canFam3.chr31                I 5 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=109251.000000
s hg38.chr14_KI270722v1_random      4823  93 +    194050 TTTTCTTTCTTtttcttttctt--tttttctttt-------------tttttttttaatataggatctcactctgtcacccaggctggaatgcagtggctctatcttg
s panTro4.chr3                 125088066  91 - 202329955 TTTTCTTTCttttccttttctt--tttttctttt-------------tttttta--aagacaggatctcactctgtcacccaggctggagtgcagtggcactatcttg
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089642  79 +  86207423 ttttctttttctttcttttctt--ttttt---------------------------aagacaggatctcactgtgtcacccaggctggagtgcagtggcactatcttg
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192449006 106 - 192599291 TTTTCTTTCGTTTTCTTTTTTTTGTTGTTGtttttttttttttttggttttttt--gagacaggatctcactccgtcacccaggccagagtgcagtggtgctgtcttg
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287652 104 + 192460366 TTTTCTTTCGTTTTCTTTTCTT--tttttgttgttgttgttttttgtttttttt--gagacaggatctcactccgtcacccaggccagagtgcagtggcactgtcttg
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258743  85 - 187378091 ctttcttttgttttgtttcttt--tttt-------------------ttttttt--gagacaggatctcactccgtcacccaggccagagtgcagtggcgctgtctta
i papAnu2.chr2                 C 0 M 50
s chlSab2.chr22                101151857  88 + 101219884 TTTTCTTTCAttttcttttttt--tttttttt---------------tttcttt--gagacagagtctcactcttttgccca-gctggagtgcagtggcacaatctcg
i chlSab2.chr22                C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099518   0 +  39895921 C
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=30712.000000
s hg38.chr14_KI270722v1_random      4916 23 +    194050 gctcactgcaacctcagcctccg
s panTro4.chr3                 125088157 23 - 202329955 gctcactgcaacctcagcctccc
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089721 23 +  86207423 gctcactgcaacctctgcctcct
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192449112 23 - 192599291 gctcactgcaacctcagcctccc
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287756 23 + 192460366 gctcactgcaacctcagcctccc
i macFas5.chr2                 C 0 C 0
s chlSab2.chr22                101151945 23 + 101219884 gctcactgcaacctcagcctccc
i chlSab2.chr22                C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099518  0 +  39895921 C
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I
e papAnu2.chr2                 187258828 50 - 187378091 M

a score=250253.000000
s hg38.chr14_KI270722v1_random      4939 146 +    194050 gggttcaagctattctcctgccttagcctcctgagtggctgggaataaaggcattcaccaccacgcca-gctaatttgtgtat---ttttt-taatacaggtggggttttgctatgttgcccaggctggtcttgaactcctgacctcaaat
s panTro4.chr3                 125088180 150 - 202329955 gggtttaagcaattctcctgccttagcctcctgagtagctaggactaaaggcattcaccaccacgccccgctaatttgtatatattttttt-tattacaggtggggttttgccatgttggccaggctggtctcgaactcctgacctcaaat
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr21                 44089744 147 +  86207423 gggttcgagcgattctcctgccttagcctcctgagtagctgggactaaaggcattcaccaccacacccagctaatttgtgtat---ttttt-tattacaggtggggttttgccatgttggccaggctggtctcgaactcctgacctcaaat
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192449135 148 - 192599291 aggttcaagtaattctcctgccttagccttctgagtagctgggactgaaggcattcaccaccacgcccagctaatttgtgtat---tttttaaattagaggtggggttttgccatgttggccaggctggtctcgaactcctgacctcaaat
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287779 148 + 192460366 aggttcaagtaattctcctgccttagccttctgagtagctgggactaaaggcattcaccaccatgcccagctaatttgtgtat---tttttaaattagaggtggggttttgccatgttggccaggctggtctcgaactcctgacctcaaat
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187258879 147 - 187378091 gggttcaagtgattctcctgcctcagccttctgagtagctgggactaaaggcattcaccaccacgcccagctaattt-tgtat---ttttaaaattagaggtggggttttgccatgttggccaggctggtctcgaactcctgacctcaaat
i papAnu2.chr2                 M 50 C 0
s chlSab2.chr22                101151968 148 + 101219884 gggttcaagtgattcttctgccttagccttctgagtagctgggactagaggcattcaccaccacgcccagctaatttgtgtat---tttttaaattagaggtggggttttgccatgttggccaggctggtctcaaactcctgacctcaaat
i chlSab2.chr22                C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099518   0 +  39895921 C
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=175168.000000
s hg38.chr14_KI270722v1_random      5085 71 +    194050 gatcctcccgcctcggcctccctaagagttggcattacaggcataagccaccatgcttggccTGATTCTGT
s panTro4.chr3                 125088330 71 - 202329955 gatccttctgcctcggcctccctaagtgctggcattacaggcataagccaccatgcttggccTGATTCTGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159728676 71 - 202140232 gatcctcctgcctcggcctccctaagggctggcattacaggcataagccaccatgcttggcctgattctgt
i ponAbe2.chr3                 N 0 C 0
s nomLeu3.chr21                 44089891 71 +  86207423 gatcctcccgcctcagcctcccaaagtgctggcattacaggcataagccaccatgcttggccTGATTCTGT
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192449283 71 - 192599291 gatcctcccgcctcggcctcccaaagtgctggcattacaggcataagccaccatgcttggccTGATCCTGT
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287927 71 + 192460366 gatcctcccgcctcggcctcccaaagtgctggcattacaggcataagccaccatgcttggccTGATCCTGT
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187259026 71 - 187378091 gatcctcccgcctcggcctcccaaagtgctggcattataggcataagccaccatgcttggcctgatCCTGT
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101152116 71 + 101219884 gatcctcccgcctcagcctcccaaattgctggcattacaggcataaaccaccatgcttggccTGATCCTGT
i chlSab2.chr22                C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11099518  0 +  39895921 C
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=644493.000000
s hg38.chr14_KI270722v1_random      5156 253 +    194050 TTTTTAACACAATTCTT-----ATTACTTCTGTTTTAATTTTACAAAGCCATAGGTTTTTAATCTGGGAAACCTTTGAGAAAACATCCAGATAAATTTATAAATAGAAAAATAAATTCAGATACATAGAATTAAGTTTATGATCTAACAAGTGGGTGGCCATTGAAAACTTTCCAAGTTCCATAAACTGAAGTGAAAGGATCCCTTTCCTGAAAATATTACAAAGGCTTGATAATTACCTGGATTGTACTAAAACCTA
s panTro4.chr3                 125088401 253 - 202329955 TTTTTAACACAATTCTT-----ATTACTTCTCTTTTAATTTTACAAAGCCATAGGTTTTTAATCTGGGAAACCTTTGAGAAAGCATCCAGATAAATTTATAAATAGAAAAATAAATTCAGATATATAGAATTAAGTTTATGATCTAACTAGTGGGTGGCAACTGAAAAATTTCCAAGTTCCATAAACTGAAGTGAAAGGATCACTTTCCTGAAAATATTACAAAGGCTTGATAATTACCTAGATTGTACTAAAACCTA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159728747 224 - 202140232 tttttaacagaATTCTT-----ATTACTTCTGTTTTAATTTTACAAAGCCATAGGTTTTTAATCTGGGAAACCTTTGAGAAAGCATCCAGATAAATTTATAAATAGAAAAATAAATTCAGATACATAGAATTAAGTTTATGATCTAACTAGTGGGTGGCAAATGAAAAATTTCCAAG----------------------------TTCCTGAAAATATTAC-CAGGCATGATAATTACCTGGATTGTACTAAAACCTA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr21                 44089962 245 +  86207423 TTTTTAACACAATTTTA-----ATTACTTCTCTTTTAATTTTTCAAAGTCATAGGTTTTTAATCT------CCTTTGAGAAAGCATCCAGACACATTTATAAATAGAAAAATAAATTCAGATACATAGAATTCAGTTTATGAT-TAACTAGTGTGTGGCAACTGAAAAATTTCCAAGTTCCATAAACTGAAGTGAAAGGATCACTTTCCTGAAAATATTAC-AAGGCTTGATAATTACCTGGATTGTACTAAAACCTA
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192449354 252 - 192599291 TTTTTAACACGATTCTT-----ATTACTTCTCTTTTACTTTTACAAAGCCATAGGTTTTTAATCTGAGAAACCTTTGAGAAAGTATCCAGATAAATTTATAAATAGAAAAATAAATTCAGATACATAGAATTAAGTTTATGATCTAACTAGTGGGTGACAACTGAAAAATTTCCAAGTCCCACAAATTGAAGTGAAAGGATCACTTTCCTGAAAATGTTAC-AAGGCTTGATAATTACCTGGATTGTACTAAAACCTA
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192287998 252 + 192460366 TTTTTAACACGATTCTT-----ATTACTTCTCTTTTACTTTTACAAAGCCATAGGTTTTTAATCTGAGAAACCTTTGAGAAAGTATCCAGATAAATTTATAAATAGAAAAATAAATTCAGATACATAGAATTAAGTTTATGATCTAACTAGTGGGTGACAACTGAAAAATTTCCAAGTCCCACAAATTGAAGTGAAAGGATCACTTTCCTGAAAATGTTAC-AAGGCTTGATAATTACCTGGATTGTACTAAAACCTA
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187259097 251 - 187378091 TTTTTAACACGATTCTT-----ATTACTTCTCTTTTACTTTTACAAAGCCATAGGTTTTTAGTCTGAGAAACCTTTGAGAAAGTATCCagataaatttataaatagaaaaataaattcagatacATAG-ATTAAGTTTATGATCTAACTAGTGGGTGACAACTGAAAAATTTCCAAGTCCCACAAATTGAAGTGAAAGGATCACTTTCCTGAAAATGTTAC-AAGGCTTGATAATTACCTGGATTGTACTAAAACCTA
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101152187 252 + 101219884 TTTTTAACATGATTCTT-----ATTACTTCTCTTTTACTTTTACAAAGCCATAGGTTTTTAATCTGAGAAACCTTTGAGAAAGTATCCAGATAAATTTATAAATAGAAAAATAAATTCAGAGACATAGAATTAAGTTTATGATCTAACTAGTGGGTGACAACTGAAAAATTTCCAAGTCCCACAAATTGAAGTGAAAGGATCACTTTCCTGAAAATGTTAC-AAGGCTTGATAATTACCTGGATTGTACTAAAACCTA
i chlSab2.chr22                C 0 C 0
s canFam3.chr31                 11099518 241 +  39895921 TTTTAAAAACAATTCTTAAATCATTACTTCTCTTTTATTCTCAAAAAGCCATAGA-------------AGAACTTTGAGAAAACAACTAGATAATTTGATAAGTAGAAAAATAAATGTCGGGATGT---ATTAAGTTAGTAATTTAATTAGTAGGTGGTAACTTACAAGTTTTAAAGTCCTATAAACTAAAACAAAAGGAATACTTCCCTGAAAATTTTTA-AACGCTTGAAAATTATATTGACTATCCTAAAACCCA
i canFam3.chr31                C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e mm10.chr16                    75496156 3784 +  98207768 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=1098333.000000
s hg38.chr14_KI270722v1_random      5409 418 +    194050 CACAATCTAGTATATTCTATAGCAGCAATTCATAAAGACAGC-TTCACTTACCATGTAGAATTTATACGTACACTAAATT----TAAGGAATGCATTACTTGCTATTGGAGTAGGATAATAAACTCCCAGCAGAACTGATTTGCATGAATGCCTATTAAACTATCATTGATGTAGAAATTAAACAATATATTAAGCTATTGAGCCCCAGATGTGTGAGAGACAGAGAAAAACTTCAAAAGAGTTCAGCTACCAAATCCCTTCC-TCAATAGCTCTTTGAGTCTCAAGACAGTTTCAACCA---CACACACCCTCAGAGTCTTATAGTCCAAACAACATTTGACTGCAGCTCTAAAGTAAGCAAACATTTGAAAAGAAA-CAATCAAAGATCTATGCCTGTAGTTATGGTCAAGGAGGTCCACCTACT-C
s panTro4.chr3                 125088654 416 - 202329955 CACAATCTAGTATATTCTATAGCAGCAATTCATAAAGACAGC-TTCACTTACCATGTAGAATTCATATGTACACTAAATT----TAAGGAACGCATTACTTGTTATTGGAGTAGGATAATAAACTCCCAGCAGAACTGATTTGCATGAATGCCTATTAAACTATCATCGATGTAGAAATTAAACAATATATTCAGCTATTCAGCCCCAGATGTGTGAGAGACAGAGACAAATTTC--AAGAGTTCGGC-ACCAAATCCTTTCC-TCAATAGCTCTTCGAGTCTCAAGACAGTTTCAACCA---CACACAGCCTCAGAGTCTTATGGTCCAAACAACATTTGACTGCAGCTCTAAAGTAAGCAAACATTTGAAAAGAAA-CAATCAAAGATCTATGCCTGTAGTTATGGTCAAGGAGGTCCACCTACTGG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159728971 412 - 202140232 CACAATCTAGTATATTCCATAACAGCAATTCATAAAGACAGC-TTCACTTTCCATGTAGAATTTATACCTACACTAAATT----TAAGGAATGCATTACTTGTTATTGGAGTAGGATAATAAACTCCCAGCAGAACTGATTTGCATGAATGCCTATTAAACTATCATTGATGTAGAAATTAAACAACATATTCAGCTATTCAGCCCCAGATGTGTGAGAGACACAGAAAAATTTCAAAAGAGTTCGGCTACCAAATCCCTTCC-TCAATAGCTCTTTGAGTCTCAAGACAGTTTCAACCA---CACACAGCCTCAGAGTCTGATGGTCCA---AATATTTGACTGCGGCTCTAAAGTAAGCAAACATTTGAAAAGAAA-----CAAAGATCTATGCCTGTAGTTACCATCAAGGAGGTCCACCCACTGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr21                 44090207 419 +  86207423 CACAATCTAGTATATTCTATAGCAGTAATTCATAAAGACAGT-TTCACTTACTATGTAGAATTTATACCTACACTGAATT----CAAGGAATGCATTACTGGTTATTGGAGTAGGACAATAAACTCCCAGCAGAACTTATTTGCATGAATGCCTATTAAACTATTATCGATGTAGAAATTAAACAATATATTCAGCTATTCAGCCCCAGATGTGTGAGAGACAGAGAAAAACTTCAAAAGAGTTCAGCTACCAAATCCCTTCC-TCAATAGCTCTTTGAGTCTCAAGACAGCTTCAACCA---CACACAGCCGCAGAGTCTTATGGTCCAAACAACATTCGACTGCAGCTCTAAAGTAAGCAAACATTTGAAAAGAAA-CAATCAAAGATCTATGCGTGTAGTTACGGTCAAGGAGGTCCACCTGCTGG
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192449606 406 - 192599291 CACAATCTAGTATATTCTATAGCAGCAATTCATAAAGACAGC-TTCACTTACCATGTAGAATTTATACCTACACTGAATT----TAAGGAATGCATTACTTGTTATTGGAGTAGGATAATAAACTCCCAGCAGAACTGAATTGCATGAATGCCTATTAAACTATCATCAATGTAGAAATTAAACAATATATTCAGCTATTCAG-CCCAGATGTGTGAGAGACAGAGAAAAATTTCAAAAGAGTTCGGCTACCAAAGCCTTTC---------CTCTTTGAGTCTCAAGACGGCTTCAACCA---CACACAACCTCAGAGTCTTATGGTCCAAACAACATTTGATTGCAGCTCTAAAGTAAGCAGACATTTGAAAAGAAA-----CAAAGATCTATGCCCATAGCTACAGTCAAGGAGGTCCACCTACAGG
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192288250 406 + 192460366 CACAATCTAGTATATTCTATAGCAGCAATTCATAAAGACAGC-TTCACTTACCATGTAGAATTTATACCTACACTGAATT----TAAGGAATGCATTACTTGTTACTGGAGTAGGATGATAAACTCCCAGCAGAACTGATTTGCATGAATGCCTATTAAACTATCATCAATGTAGAAATTAAACAATATATTCAGCTATTCAG-CCCAGATGTGTGAGAGACAGAGAAAAATTTCAAAAGAGTTCGGCTACCAAATCCTTTC---------CTCTTTGAGTCTCAAGACAGCTTCAACCA---CACACAACCTCAGAGTCTTATGGTCCAAACAACATTTGATTGCAGCTCTAAAGTAAGCAGACATTTGAAAAGAAA-----CAAAGATCTATGCCCATAGCTACAGTCAAGGAGGTCCACCTACAGG
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187259348 414 - 187378091 TACAATCTAGTATATTCTATAGCAGCAATTCATAAAGACAGC-TTCACTTACCATGTAGAATTTATACCTACACTGAATT----TAAGGAATGCATTACTTGTTATTGGAGTAGGATAATAAACTCCCAGCAGAACTGATTTGCATGAATGTCTATTAAACTATCATcaatgtagaaattaaacaatatattcaGCTATTCAG-CCCAgatgtgtgagagacagagaaaaatttcaaaagagtTCGGCTACCAAATCCTTTCC-TCAATAGCTCTTTGAGTCTCAAGACAGCTTCAACCA---CACACAGCCTCAGAGTCTTATGGTCCAAACAACATTTGATTGCAGCTCTAAAGTAAGCagacatttgaaaagaaa-----caaagatctaTGCCTGTAGCTACAGTCAAGGAGGTCCACCTACAGG
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101152439 406 + 101219884 CACAATCTAGTATATTCTATAGCAGCAATTCATAAAGACAGC-TTCACTTACCATGTAGAATTTATACCTACACTGAACT----TAAGGAATGCATTGCTTGTTATTGGAGTAGGATAATAAACTCCCAGCAGAACTGATTTGCATGAATGCCTATTAAACTATCATCAATGTAGAAATTAAACAATATATTCAGCTATTCAG-CCCAGATGTGTGAGAGACAGAGAAAAATTTCAAAAGAGTTCGGCTACCAAATCCTTTC---------CTCTTTGAGTCTCAAGACAGCTTCAACCA---CACACAGCCTCAGAGTCTTATGGTCCAAACAACATTTGATTGCAGCTCTAAAGTAAGCAGACATTTGAAAAGAAA-----CAAAGATCTATGGCTGTAGCTACAGTCAAGGAGGTCCACCTACAGG
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75499940 363 +  98207768 CAAAGTCTGAGATACGGTATAAGAACCATTCATTAAGATAACATTCTGATACCATAT-TAATTCATAAGTAAACCAAATT----TAATGAATGCACTAGTTACTAGTGAAGTACAATAACGGATCACTACTA--------------TAAGACCTGTTAATAATTCATTGATGGAAAAACTGAACAATATATTCA---AGTCAA-ACCAGAC------------------AATTGCAAAGAATGTGAAATACTAAAGTATTTTCAGCAGAAGGTATTAGAG--TCAAAACAACTCCAGCTA--GTATTTAGCTTT--AGTCTTACAGTGAA---ACCATCTTATTTCAGT------GTATACATCTACTTAAAAATAT------CAAAGA-CTAGACAAGTA-TTAGCGCATGAGACATTCATTCATA--
i mm10.chr16                   I 3784 C 0
s canFam3.chr31                 11099759 408 +  39895921 CACAATAAAATATATTCTATAGTAGTAATTCAAAAAGATAGC-TTTACATATCATAAGGAATTTATATTTATATTGAGTTTAAGTAAGGAGTAGATTCCTTGTTATCGGAAGAAGATACTAAACTCACACTAGAACTGATGTGCGTGAAT-CATGTTGGAATAAC-TTGATGTAGAAATTAAACAACAAATTCAGC--------CCCAGATGTGTGAAGAATAAAGACAATTTTTA----AGTTTGGCCACTAAGTTCCTCCCCTAAAAAGGTCTTTGAG--TCCAGACAGTTGCATCCATTACTCAGAGCCTCAGAGCCTCATGTTTCAAAGTACATTTTCTTGCAGTTATAA-GTAATCAAATATTAAAAAAGGAAATAATCAAAGACCAAAATAGGTAGTTAGGGTGACAGAGTTTCATCCAC---
i canFam3.chr31                C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=4095.000000
s hg38.chr14_KI270722v1_random      5827 1 +    194050 T
s panTro4.chr3                 125089070 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159729383 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr21                 44090626 1 +  86207423 T
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192450012 1 - 192599291 T
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192288656 1 + 192460366 T
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187259762 1 - 187378091 T
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101152845 1 + 101219884 T
i chlSab2.chr22                C 0 C 0
s saiBol1.JH378168               2195685 1 +  13128814 T
i saiBol1.JH378168             N 0 I 12395
s mm10.chr16                    75500303 1 +  98207768 T
i mm10.chr16                   C 0 C 0
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e canFam3.chr31                 11100167 0 +  39895921 C
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=5043.000000
s hg38.chr14_KI270722v1_random      5828 2 +    194050 GG
s panTro4.chr3                 125089071 2 - 202329955 GG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159729384 2 - 202140232 AG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr21                 44090627 2 +  86207423 GG
i nomLeu3.chr21                C 0 C 0
s rheMac3.chr2                 192450013 2 - 192599291 GG
i rheMac3.chr2                 C 0 C 0
s macFas5.chr2                 192288657 2 + 192460366 GG
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187259763 2 - 187378091 GG
i papAnu2.chr2                 C 0 C 0
s chlSab2.chr22                101152846 2 + 101219884 GG
i chlSab2.chr22                C 0 C 0
s mm10.chr16                    75500304 2 +  98207768 AA
i mm10.chr16                   C 0 C 0
s canFam3.chr31                 11100167 2 +  39895921 AG
i canFam3.chr31                C 0 C 0
e saiBol1.JH378168               2195686 12395 +  13128814 I
e panPan1.JH650580              19568842 3367 -  19803153 I
e tarSyr2.KE939969v1              324035 9086 +    345090 I
e otoGar3.GL873528              18013218 9948 -  38779656 I
e gorGor3.chr3                 122128218 2024 - 199944510 I

a score=2329.000000
s hg38.chr14_KI270722v1_random         5830 1 +    194050 G
s panTro4.chr3                    125089073 1 - 202329955 A
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159729386 1 - 202140232 A
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44090629 1 +  86207423 G
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450015 1 - 192599291 G
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192288659 1 + 192460366 G
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187259765 1 - 187378091 G
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101152848 1 + 101219884 G
i chlSab2.chr22                   C 0 C 0
s tupBel1.scaffold_136731.1-86001     28717 1 +     86001 A
i tupBel1.scaffold_136731.1-86001 N 0 I 9057
s mm10.chr16                       75500306 1 +  98207768 G
i mm10.chr16                      C 0 I 1
s canFam3.chr31                    11100169 1 +  39895921 G
i canFam3.chr31                   C 0 C 0
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122128218 2024 - 199944510 I

a score=453624.000000
s hg38.chr14_KI270722v1_random         5831 180 +    194050 -----TGAGCATGGCAAGGATAGGGACTAAGCCAAATGATGGGTTTACCAAAACAGAAACAGGAGAAGTCATTGGAAGCACAGTCCAGGTTATAACAGGAGCCCAGGCACTTGATGTGGG----AACCCTATTTGTCTC----ATTCAGCACCTAGA-GTTTTAACATCCTATGAGGCACAGCTAATGCCCTTC
s panTro4.chr3                    125089074 180 - 202329955 -----TGACCATGGCAAGGATAGGGACTAACCCAAATGATGGGCTTACCAAAAGAGAAACAAGAGAAGCCACTGGAAGCAGAGTCCAGGTTATAACAGGAGCGCAGGCACTTGATGTGGG----AACCCTATTTGTCTT----ATTTAGCAGCTAGA-GTTTTAACGTCCTATGAGGCAGAGCTAATGCCCTTC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159729387 180 - 202140232 -----TGACCATGGCAAGGATAGGGACTAAGCCAAATGATGGGTTTACCAAAACAGAAACAAGAGAAGCCATTGGAAGCAGAGTCGAGGTTATAACAGGAGTGCAGGCACTTGATGTGGG----AACCCTATTTGTCTC----ATTTAGCAGCTAGA-GTTTTAACATCCTATGTGGCAGAGCTAATGCCCTTC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44090630 179 +  86207423 -----TGACCATGGCAAGGATAGGGACTAAGCCAAATGATGGCTTTACCAAAACAGAAACAAGAGAAGCCATTGGAAGCAGAGTCCAGGTTACAACAGGAGCCCAGGCACTTGATGTGGG----AACCCAACTTGTCTC----ATTTAGCAGCTGGA-GCTTTAACGTCCTATGAGGC-GAGCTAATGCCCTTC
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450016 180 - 192599291 -----TGACCATGGCAATGATAGGGACTAAACCAAATGGTGCGTTTACCAAAACAGAAACAAGAGAAGCCACTGGAAGCAGAGTCCAGGTTATAACAGGAGGCCAGGCACACGATGCGGG----AACCCTATTTGTCTC----ATTTAGCAGCTAGA-GTGTTAACATCCTATGAGGCAGAACTAATGCCCTTC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192288660 180 + 192460366 -----TGACCATGGCAATGATAGGGACTAAACCAAATGGTGCGTTTACCAAAACAGAAACAAGAGAAGCCACTGGAAGCAGAGTCCAGGTTATAACAGGAGGCCAGGCACACGATGCGGG----AACCCTATTTGTCTC----ATTTAGCAGCTAGA-GTGTTAACATCCTATGAGGCAGAACTAATGCCCTTC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187259766 180 - 187378091 -----TGACCATGGCAATGATAGGGACTAAACCAAATGGTGCGTTTACCAGAACAGAAACAAGAGAAGCTACTGGAAGCAGAGTCCAGGTTATAACAGGAGGCCAGGCACACGATGCGGG----AACCCTATTTGTCTC----ATTTAGCAGCTAGA-GTGTTAACATCCTATGAGGCAGAACTAATGcccttc
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101152849 180 + 101219884 -----TGACCACGGCAATGATAGGGACTAAACCAAATGGTGCGTTTACCAGAACAGAAACAAGAGAAGCCACTGGAAGCAGAGTCCAGGTTATAACAGGAGGCCAGGCACACGATGCAGG----AACCCGATTTGTCTC----ATTTAGCAGCTAGA-GTGTTAACATCCTATGAAGCAGAACTAATGCCCTTC
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75500308 169 +  98207768 -----AAGTTACAGCAGGGGTAGAGGCTGAATCAAATAACAAACTGACATGAACATGAACCAGGGGACCTATCAACAGCAGAGAC-AGCTTATAGCTACAGTTCGAACATGAAAGGCAG--------CCCTTGTGTCTCCAAAAATCAGCAGC------ATTTAATAATCCAGAATGCAG----GATGCCCTT-
i mm10.chr16                      I 1 C 0
s canFam3.chr31                    11100170 181 +  39895921 TGGGTTTACTCTGACAGAAGTACGGAGTGTGCCAAATGATAG-----CCAGAACAAGAACAAG-GAAACTGATCTCAACAGAGTCTCAG-TAGAACCGGAA-CCAGGTATA-GACATGGAATCTATCCTCATTTTTCTC----ACTTAGCAGCTAGGTTTTTTAATGTCCTATGAGGCAGGGAGAGTGCCCTTC
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122128218 2024 - 199944510 I

a score=12595.000000
s hg38.chr14_KI270722v1_random         6011 3 +    194050 ATT
s panTro4.chr3                    125089254 3 - 202329955 ATT
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122130242 3 - 199944510 ATT
i gorGor3.chr3                    I 2024 I 1969
s ponAbe2.chr3                    159729567 3 - 202140232 ATT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44090809 3 +  86207423 ATT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450196 3 - 192599291 ATT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192288840 3 + 192460366 ATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187259946 3 - 187378091 att
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101153029 3 + 101219884 ATT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75500477 1 +  98207768 --T
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11100351 3 +  39895921 ATT
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I

a score=1130338.000000
s hg38.chr14_KI270722v1_random         6014 381 +    194050 ATT------TTTTTGTAATTGACTGCATAGTTTAGAACTATGCCTTGAATTTAATATCTATCTGTTGAATAAATGAATTAATAATGATGAa-----aatctgtccacaggttatgtgcagtact-gaagagcaacttcagctat--tgaggtatctatcagaagtcttactctctaaaaagcctctggttaattactgatataggttgctgacaatttcactctcacaatgtaagggaagcaggaatgttatctggcctCTTGGCTCCTATTC-CTTTGCCTTCCACAGATCTCTCTGCTGGTTCACAGAGGAACAGTTTTGTGGCTTTCAGTTCATTT-TGCAATTCTGCTAGAA-TCTCATTCCATCCTCAGTTGTAACAAGCTTGTCCTTCACCC
s panTro4.chr3                    125089257 381 - 202329955 ATTATTTACTTTTTGTAATTGACTGC--AGTTTAGAACTATGCTTTGAATTTAA----TATCTGTTGAATAAATGAATTAATAATGATGAa-----aatctgtccacaggttgtgtgcagcact-gaagagtgacttcagctat--tgaggtgtctatcagaagtcttactctctaaaaagcctctcgttaattactgacataggttgctgacaatttcactcccacaatgtacaggaagcaggaatgttatctggccttTTGGCTCCTCTTC-CTTTGCCTTCCACAGCTGTCTCTGCTGGTTCACAGAGGCACATTTTTGTGGCTCTCAGTTCATTT-TGCAATTCTGCTAGAA-TCTCGTTCCATCATCAATTGTAACCAGCTTGTCCTCCGCCC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159729570 387 - 202140232 ATTATTTATTTTTTGTAATTGACTGCATAGTTTAGAACTATGCCTTGAATTTAATATCTGTCTGTTGAATAAATGAATtaataatgatgaa-----aatctgtccacaggttatgtgcagcact-gaagagcgacttcagctat--tgaggtatctagcagaagtcttactctctaaaaagcctctcgttaattactgatataggttgctgacgatttcactctcacaatgtaggggaagcaggaatgttatctggcctCTTGGCTCCTCTTC-CTTTGCCTTCCACAGCTCTCTCTGCTGGTTTACAGAGGGACACTTTTGTGGCTCTCAGTTCATTT-TGCAATTCTGCTAGAA-TCTCATTCCATCCTCAACTGTAACCAGCTTGTCCTCCACCC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44090812 385 +  86207423 ATTATTTATTTTTTGTAATTGACTGCATAGTTTAGAACTATGCCTTGAATTTAATATCTATCTGTTGAATAAATGAATTAATAATGATGaa-----aatctgtgcacaggttatgtgcagtact-gaagagcgacttcagctat--tgaagtgtctatcagaattcttactctctaaaaagcctctggttaattactgacataggttgctgacaatttcactctcacaatgtaggggaagcaggaatattatctggcctCTTGGCTCCTCTTC-CTCTGCCTTCCACAGCTCTCTCTGCTGGTT--CAGAGGCACACTTTGGTGGCTCTCAGTTCATTC-TGCAATTCTGCTAGAA-TCTCGTTCCATCCTCGATTGTAACCAGCTTGTTCTCCACCC
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450199 378 - 192599291 ATTATTTATTTTTTGTAATTGACAGTATAGTTTAGAACTATGCCTTGAATTTAATATCTATCTGTTGAATAAATG----AATAATGATGAA-----AATC----cacaggttatgtgcagtact-aaagagctacttcagcta---cgaggtagctattagaagtcttactctctaaaaagcctctggttaattattgatacaggttgctgacaatttcactctcacaatgtaggggaagcaggaatgtgatccggcctctcgactCCTCTTC-CTTTGCCTTCCACAGCAATCTCTGCTGGTTCACAGAGGGACACCTTCGTGGCTCTCAGTTCATTT-TGCAATTCTGCTAGAA-TCTCGTTCCATCCTCAACTGTAACCAGCTTGTCCTCTGCTG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192288843 378 + 192460366 ATTATTTATTTTTTGTAATTGACAGTATAGTTTAGAACTATGCCTTGAATTTAATATCTATCTGTTGAATAAATG----AATAATGATGAA-----AATC----cacaggttatgtgcagtact-aaagagctacttcagcta---cgaggtagctattagaagtcttactctcgaaaaagcctctggttaattattgatacaggttgctgacaatttcactctcacaatgtaggggaagcaggaatgtgatctggcctctcgactCCTCTTC-CTTTGCCTTCCACAGCAATCTCTGCTGGTTCACAGAGGGACACCTTCGTGGCTCTCAGTTCATTT-TGCAATTCTGCTAGAA-TCTCGTTCCATCCTCAACTGTAACCAGCTTGTCCTCTGCTG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187259949 378 - 187378091 attatttattttttgtaattgaCAGTATAGTTTAGAACTATGCCTTGAATTTAATAtctatctgttgaataaatg----aataatgatgAA-----AATC----CACAGGTTATGTGCAGTACT-AAAGAGCTACTTCAGCTA---CGAGGTAGCTATTAGAAGTCTTACTCTCTAAAAAGCCTCTGGTTAATTATTGATACAGGTTGCTGACAATTTCACTCTCACAATGTAGGGGAAGCAGGAATGTGATCTGGCCTCTCGACtcctcttc-ctttgccttccacagCAATCTCTGCTGGTTCACAGAGGGACACCTTTGTGGCTCTCAGTTCATTT-TGCAATTCTGCTAGAA-TCTCGTTCCATCCTCAATTGTAACCAGCTTGTCCTCTGCTG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101153032 378 + 101219884 ATTATTTATTTTTTGTAATTGACAGTATAGTTTAGAACTATGCCTTGAATTTAATATCTATCTGTTGAATAAATG----AATAATGATGAA-----AATC----cacaggttatgtgcagtact-aaagagctacttcagcta---cgaggtatctattaggagtcttactctctaaaaagcctctggttaattattgatacaggttgctgacaatttcactctcacaatgtaggggaagcaggaatgtgatctggcctcttgactCCTCTTC-CTTTGCCTTCCACAGCAATCTCTGCTGGTTCACAGAGGGACACCTTTGTGGCTCTCAGTCCATTT-TGCAATTCTGCTAGAA-TCTCGTTCCATCCTCAACTGTAACCAGCTTGTCCTCTTCTG
i chlSab2.chr22                   C 0 I 130
s mm10.chr16                       75500478 385 +  98207768 ------CCTTTTCTGTAGTCCCCTGCATAATTTAGGGCCATGCTTTGAATTTAATATCAATTTGTTGGATAAATG----AATAATTAAGCATGACTAATCTCTGACTAGGCCATGACAAGTACCAGAAGCGGGGCGCTGGCTCTGAAGAGCAatctattagaaatcttgctctccagaaagcttctgattaattattgatatttgttgctcacaacttcactttcacagaggtaaaggagcactcaggTTATTTGGCCTCTTAGCGCCTCCTCTCTTAATTTTCCCAAGTCCTCAGTTTCGATCCAAAGAGG---ACTCTTGTGACTTTCCATTCCTTTCTGCTCTTCTGCTAGAATTCTTTGTCCATTCTCATGTGTGACCAATTTGCCTCTTGCCA
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11100354 374 +  39895921 ----TCTGTTTGATTTAATT-CCTGCATAGTTTAAGACTATTCCTTCAACTTAG---CTGTTTGTTGAATAATT-----AATgatgactaa-----aatctgtccacaggtcatgtgtagtact-gaggagagacttcagctat--taaggtatctattagaagtcttaccttttaaaaagcctctaattaattattgatatgtatcactaacaatttcactctcacaaggtagagaaagcagtgaggTTATTTGGCCTCTTGGCTTCTCTTC-CTTTGCCTTCCACAGCCCTCTCTCCTGGTTCACATATAGGCAATTTTGTGACTTTCAATTTATTT-TGCACTTCTGCTAGAA-CCTCTTTTCATCCTCCAGTCTAAGCAACTTGTCCTCTGCCC
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=582753.000000
s hg38.chr14_KI270722v1_random         6395 216 +    194050 AACACTTATT---------TATGGAGGGAGAGATAGCAAGAAGAAATCGCACTCTGGATTACAGAGTGGGAAGACGCACCCCTTGG-CCAGAATGcctgcctcctatgttcatgatggatatttctaattgatc----tcggcactcttttccattgagcccATGTCCCATATTGGCCGTGAGTTGGGGAGAGGGCTCTAGAGTGGGAAAGTTGTACCCAAA-ACTTCCCT
s panTro4.chr3                    125089638 216 - 202329955 AACGCTTATT---------TATGGAGAGACAGACAGCAAGAAGAAATCGCACTCTGGATTACAAAGCGGGAAGACGCACCCCTTGG-CCAGAATGcctacctcctatgttcatgatggatatttctaattgatc----ttggcactcttttccatttagcccATGCCCCAAATTGGCCCTGAGTTAGGGAGATGGCTCTAGAGTGGGAAAGGTGTACCCAAA-ACTTCCCT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159729957 216 - 202140232 AGCGCTTATT---------TATGGAGGGACAGATAGCAAGAAGAAATCACACTCTGGACTACAAAGTGGGAAGACGCACCCCTTGG-CCAGAATGCCTGcctcctatgttcgtgatggatatttctaattgatc----ttggcactcttttccattgaacccaTGTCCCAAGTTGGCCCTGAGTTAGGGAGAGGACTCTAGAATGGGAAAGGTGTACCCAAA-ATTTCCCT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091197 216 +  86207423 AACGCTTATT---------TATGGAGGGACAGATAGCAGGAAGAAATCGCACTCTGGAATACAAAGTGGGAAGACACACCCTTTGG-CCAGAATGcctgcctcctatgttcatgatggatatttctaattgatc----tcggcactcttttccattgagcccATGTCCCAAATTGGCCCTGAGTTAGGGAGAGGACTCTAGAGTGGGAAAGGTGTACCCAAA-ACTTCCCT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450577 215 - 192599291 AACACTTATT---------TATGGAGGGGCAGATAGCAAGAAGAAATCGCACTCTGGATTACAAAGTGGGAAGACGCACCCCTTGG-CCAGAATGTCTGCC-CCGGTGTTCATGATGGATATTTCTCATTAATC----TTGGCACTCTTTTCCATTGAACCCATGTCCCAAGTTGGCCCTAAGTTAAGGAGAAGACACTAGGGAGGGAAAGGTTTACCCAAA-ACTTCCCT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289221 215 + 192460366 AACACTTATT---------TATGGAGGGGCAGATAGCAAGAAGAAATCGCACTCTGGATTACAAAGTGGGAAGACGCACCCCTTGG-CCAGAATGTCTGCC-CCGGTGTTCATGATGGATATTTCTCATTAATC----TTGGCACTCTTTTCCATTGAACCCATGTCCCAAGTTGGCCCTAAGTTAAGGAGAAGACACTAGGGAGGGAAAGGTTTACCCAAA-ACTTCCCT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187260327 215 - 187378091 AACACTTATT---------TATGGAGGGGCAGAGAGCAAGAAGAAATTGCACTCTGGATTACAAAGTGGGAAGACGTGCCCCTTGG-CCAGAATGTCTGCC-CCGATGTTCATGATGGATATTTCTCATTAATC----TTGGCACCTTTTTCCATTGAGCCCATGTCCCACGTTGGCCCTAAGTTACGGAGAAGACACTAGGGAGGGAAAGGTTTACCCAAA-ACTTCCCT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101153540 216 + 101219884 AACACTTATT---------TATGGAGGGACAGATAGCAAGAAGAAATCGCACTCTGGATTACAAAGTGGGAAGACGCACCCCTTGG-CCAGAATGTCTGCCTCCAATGTTCATGATGGATATTTCTCATTAATC----TTGGCACTCTTTTCCATTGAGCCCATGTCCCAAGTTGGCCCTAAGTTAAGGAGAAGACACTAGGGAGGGAAAGGTGTACCCAAA-ACTTCCCT
i chlSab2.chr22                   I 130 C 0
s mm10.chr16                       75500863 192 +  98207768 GACAGTCATTCACAATTTCTATG--------CATAGTAAAAGGAGAGCCCA-----GATTTCAAATGGGAAAGAAGCATTACATGG-CCAGAGCTGCTGCTTCCTGGATCCAGGATGGCTATTCCTAATTGGCCCAGACAGACACACGTTGTCATCAATCCCATGTCCCATACTTGTCTTGAGGT-------------------------TGTTTTCTCAAACATTCCCCC
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11100728 209 +  39895921 AACATTCACT---------CATAGAAGGACAATCAGCAAGAAG---TCACACTCTAGATAT--AAGAAGAAAGAAGCACCACTTGGACTAGAAGGACTATCTCCTATGCTCA-AATGAGTATTTCTGCTGGATC----TCAGCACTGTTTTCCATTGAGCCCATGTACCAAATTGGCTCTGAATTAGGTAGAATAAA--AAATTGGAAATTGTTTATCCAAA-AATTCCCT
i canFam3.chr31                   C 0 I 258
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=305312.000000
s hg38.chr14_KI270722v1_random         6611 122 +    194050 AATCTGACTA---CCAAGCCTAA--AAAATTAAACTTTCAATTCAACATCCCTTGTTTCTCCAACTTGGAGTGCCTGATGGTGTGGGAAGCCCCTACTC------ATAAAAATTCATAGTTGAAGATTGTTGG
s panTro4.chr3                    125089854 122 - 202329955 AATCTGACTA---TTGAGCCTAA--AAAATTAAACTTTCAATTCAACATCCCTTGTTTCTCCAGCTCGGAGTGCCTGATGATGTGGGAAGCCCCTATTC------ATAAAAATTCATAGTTGAAGATTGTTGG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730173 122 - 202140232 AATCTGACTA---TCAAGCCTAA--AAAATTAAACTTTCAATTCAACATCCCTTGTTTCTCCAGCTCGGAGTGCCTGATGGTGTGGGAAGCCCCTACTC------ATAAAAATTCATCATTGAAGATTGTTGG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091413 122 +  86207423 AATCTGACTA---TCAAGCCTAA--AAAGCTAAACATTCAATTCAACATCCCTTGTTTCTCCAGCTCAGAGTGCCTGATGGTGTGGGAAGCCCCTACTC------ATAAAAATTCATAGTTGAAGATTGTTGG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450792 124 - 192599291 AAT----CTA---TCAAACCTAG--AAACGTAAACGTTCAATTCGACATCCCCTGTTTCTCCAGCTCAGAGTGCCTGACGGTGTGGGAAGCCTCTACTCACAAAAATAAAAATTCATAGTTGAAGATTGTTGG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289436 124 + 192460366 AAT----CTA---TCAAACCTAA--AAACGTAAACGTTCAATTCGACATCCCCTGTTTCTCCAGTTCAGAGTGCCTGACGGTGTGGGAAGCCTCTACTCACAAAAATAAAAATTCATAGTTGAAGATTGTTGG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187260542 124 - 187378091 AAT----CTA---TCAAACCTAA--AAACGTAAACGTTCAATTCGACATCCCCTGTTTCTGCAGCTCACAGTGCCTGACGGTGTGGGAAGCCCctactcacaaaaataaaaattcatagttGAAGATTGTTGG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101153756 123 + 101219884 ATT----CTA---TCAAACCTAA--AAACGTAAATGTTCAATTCGACAT-CCCTGTTTCTCCAGCTCAGAGTGCCTGATGGTGTGGGAAGCCACTACTCACAAAAATAAAAATTCATAGTTGAAGATTGTTAG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75501055 116 +  98207768 AAT----GTAGGCTCCAACTGGAGCAGACTAAAACATTTTGCTCA-------CTATCTCTCAACCTCAGAATGCCTGATACTGTCAGAAGCCAGTGTTC------AAAACAACTCTGAGTTCACAATTGCTTA
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11101195 121 +  39895921 aaacaaaCTG---CCAACTCAAA--CAAACTAAATGCTCAACTCACCATCCTTTGTTTCTTCATATCAGGATGTTTGATGGTGTTGGAAGCTTG-ACTC------AAAACAACTCATAGTTCAAAATTGTTAG
i canFam3.chr31                   I 258 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=30566.000000
s hg38.chr14_KI270722v1_random         6733 14 +    194050 TAATTTTGCCCAAC-
s panTro4.chr3                    125089976 14 - 202329955 TAATTTTGCCCAAC-
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730295 14 - 202140232 TAATTTTGCCCAAC-
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091535 14 +  86207423 TAATTTTGCCCAAC-
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450916 14 - 192599291 TAATTTTGCTCAAC-
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289560 14 + 192460366 TAATTTTGCTCAAC-
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187260666 14 - 187378091 TAATTTTGCTCAAC-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101153879 14 + 101219884 TTATTTTGCTCAAC-
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75501171 14 +  98207768 TACTTTAGC-CAGTG
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11101316  0 +  39895921 C
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=205.000000
s hg38.chr14_KI270722v1_random         6747 1 +    194050 C
s panTro4.chr3                    125089990 1 - 202329955 C
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730309 1 - 202140232 T
i ponAbe2.chr3                    C 0 C 0
s papAnu2.chr2                    187260680 1 - 187378091 C
i papAnu2.chr2                    C 0 C 0
s mm10.chr16                       75501185 1 +  98207768 T
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11101316 0 +  39895921 C
e gorGor3.chr3                    122130245 1969 - 199944510 I
e chlSab2.chr22                   101153893 0 + 101219884 C
e macFas5.chr2                    192289574 0 + 192460366 C
e rheMac3.chr2                    192450930 0 - 192599291 C
e nomLeu3.chr21                    44091549 0 +  86207423 C

a score=3213.000000
s hg38.chr14_KI270722v1_random         6748 10 +    194050 TCCttc-----tttt
s panTro4.chr3                    125089991 15 - 202329955 TCCTTCTTTCAtttt
i panTro4.chr3                    C 0 C 0
s papAnu2.chr2                    187260681 10 - 187378091 TCCTTC-----tttt
i papAnu2.chr2                    C 0 C 0
s mm10.chr16                       75501186 10 +  98207768 TCTTTC-----TCTT
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159730310  0 - 202140232 C
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11101316  0 +  39895921 C
e gorGor3.chr3                    122130245 1969 - 199944510 I
e chlSab2.chr22                   101153893  0 + 101219884 C
e macFas5.chr2                    192289574  0 + 192460366 C
e rheMac3.chr2                    192450930  0 - 192599291 C
e nomLeu3.chr21                    44091549  0 +  86207423 C

a score=4717.000000
s hg38.chr14_KI270722v1_random         6758 75 +    194050 -tttttattatacttta----agttctaggg-----------tacttgtgca--caacttgcaggttcattacatatgtacacatgagacatg
s panTro4.chr3                    125090006 75 - 202329955 -tttttattatacttta----agttctaggg-----------tacatgtgca--caacgtgcaggtttgttacataggtatacatgtgccatg
i panTro4.chr3                    C 0 C 0
s mm10.chr16                       75501196 90 +  98207768 CACCTAAATACGTTTCAGAACAGTCTCTGGGCAAAACCAAGCCACTCATACAGTTAAGCTGTATGTTCATCATA---GCCAACTTGAATCATG
i mm10.chr16                      C 0 I 510
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159730310  0 - 202140232 C
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11101316  0 +  39895921 C
e gorGor3.chr3                    122130245 1969 - 199944510 I
e chlSab2.chr22                   101153893  0 + 101219884 C
e papAnu2.chr2                    187260691  0 - 187378091 C
e macFas5.chr2                    192289574  0 + 192460366 C
e rheMac3.chr2                    192450930  0 - 192599291 C
e nomLeu3.chr21                    44091549  0 +  86207423 C

a score=21638.000000
s hg38.chr14_KI270722v1_random         6833 293 +    194050 ttggtgtgctgcaccgattaactcgtcattttcattaggtatatcccctaatgcttttcctcccctagcccctcaccccacaacaggccccagtgtgtgatgttccc-------------------------------------------------------------------------ccttgtgatagtttgctgagaataatggtttccagcttcatccatgtccctacaaaggacaagaactcatca-tttttatggctgcagagtattccatggtgtatatgtgccacattttcttaatccagtctatcaatgttggacatttgggttggttccaagtctttgctattgtcagtagtgcct
s panTro4.chr3                    125090081 366 - 202329955 ttgg-gtgctgcacccattaactcatcatttacattaggtatatctcctaatgctttccctcccctagcccctcaccccacaacaggccttggtgtgtgatgttccccttcttgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgctgtgtttggctttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgagtagtaccg
i panTro4.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159730310   0 - 202140232 C
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11101316   0 +  39895921 C
e mm10.chr16                       75501286 510 +  98207768 I
e gorGor3.chr3                    122130245 1969 - 199944510 I
e chlSab2.chr22                   101153893   0 + 101219884 C
e papAnu2.chr2                    187260691   0 - 187378091 C
e macFas5.chr2                    192289574   0 + 192460366 C
e rheMac3.chr2                    192450930   0 - 192599291 C
e nomLeu3.chr21                    44091549   0 +  86207423 C

a score=1284.000000
s hg38.chr14_KI270722v1_random         7126 7 +    194050 caataaa
s panTro4.chr3                    125090447 7 - 202329955 caataaa
i panTro4.chr3                    C 0 C 0
s canFam3.chr31                    11101316 7 +  39895921 CAACCAA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159730310 0 - 202140232 C
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75501286 510 +  98207768 I
e gorGor3.chr3                    122130245 1969 - 199944510 I
e chlSab2.chr22                   101153893 0 + 101219884 C
e papAnu2.chr2                    187260691 0 - 187378091 C
e macFas5.chr2                    192289574 0 + 192460366 C
e rheMac3.chr2                    192450930 0 - 192599291 C
e nomLeu3.chr21                    44091549 0 +  86207423 C

a score=2100.000000
s hg38.chr14_KI270722v1_random         7133 1 +    194050 c
s panTro4.chr3                    125090454 1 - 202329955 c
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44091549 1 +  86207423 C
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450930 1 - 192599291 C
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289574 1 + 192460366 C
i macFas5.chr2                    C 0 C 0
s chlSab2.chr22                   101153893 1 + 101219884 C
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11101323 1 +  39895921 C
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159730310 0 - 202140232 C
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75501286 510 +  98207768 I
e gorGor3.chr3                    122130245 1969 - 199944510 I
e papAnu2.chr2                    187260691 0 - 187378091 C

a score=20657.000000
s hg38.chr14_KI270722v1_random         7134 10 +    194050 TCCTTCTTTC--
s panTro4.chr3                    125090455 10 - 202329955 TCCTTCTTTC--
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730310 10 - 202140232 TCCTTCTTTC--
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091550 10 +  86207423 TCCTTCTTTC--
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450931 10 - 192599291 TCCTTCTTTC--
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289575 10 + 192460366 TCCTTCTTTC--
i macFas5.chr2                    C 0 C 0
s chlSab2.chr22                   101153894 10 + 101219884 TCCTTCTTTC--
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11101324 10 +  39895921 --CTTCTCTCTC
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75501286 510 +  98207768 I
e gorGor3.chr3                    122130245 1969 - 199944510 I
e papAnu2.chr2                    187260691  0 - 187378091 C

a score=838639.000000
s hg38.chr14_KI270722v1_random         7144 332 +    194050 TTTGCCTAGTTACACCTCAATGCAACCTCCTGGCAGGCCAGCCTTAAGCCCAGCAGTCTAACCATGCATCTAAGCTGAGTTCTCGTCAGAGCCAACTTCAATTATAAACAACTGAGATGATGCCAGAGGCCAGAATCCCTGAGAACCCAATTTGCTGTCATAACCGCAGGTGAAA---------------CAAGGCACTTGGCATCTAGAAAAGCTGGTCTGTAGGAAATTTCCAAAAGAGTTCAATTTTTTCCAAGTTTAAAGTGTACAATATCATCAAGGTCAGACACTCGAGATAAAACTAGGCTTGTGTTTAAATATAATAAAAATAT--------TTGAAGAAT---------------------------------------------------------------AGTAAG
s panTro4.chr3                    125090465 332 - 202329955 TTTGCCTAGTTACACCTCAATGCAACCTCCTGGCAGGCCAGCCTTAAGCCCAGCAGTCCAACCATGCATCTAAGCTGAGTTCTCATCAGAGCCAACTTCAATTATAAGCAACTGAGACGATGCCAGAGGCCAGAATCCCTGAGAACCCAATTTGCTGTCATCACCGTGGCTGAAA---------------CAAGGCACTTGGCATCTAGAAAAGCTGATGTGTAGGAAATTTCCAATAGAGTTCAATTTTTTCTAAGTTTAAAGTGTACAATATCATCAAGGTCAGACGCTCGAGATAAAACTAGGCTTGCGTTTAAATAGAATAAGAATAT--------TTGAAGAAT---------------------------------------------------------------AGTAAG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730320 332 - 202140232 TTTGCCTAGTTACACCTCAAGGCAACCTCCTGGTAGACCAGCCTTAAGCCCAGCAGTCCAACCATGCATCTAAGCTGAGTTCTCATCAGAGCCAACTTCAATTATAAACAACTGAGATGATGCCAGAGGCCAGAATCCCTGAGAACCCACTTTGCTGCCATCACCATGGCTAAAA---------------CAAGACTATTGGCATCTAGAAAAGCTGATGTGTAGGAAATTTCCAAAAGAGTTCAATTTTTTCTAAGTTTAAAGTACACGATATCATCAAGGTCAGACACTCGAGATAAAACTAGGCTTGCATTTAAATAGAATAAAAATAC--------CTGAAGAAT---------------------------------------------------------------AGTAAG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091560 330 +  86207423 TTTGCCTAGTTACACCTCAAGGCAACCTCCTGGCAGGCCAGCCTTAAGCCCAGCAGTCCAACCATGCATCTAAGCTGAGTTCTCATCAGATCCAAATTCAATTATAAACAACTGAGATGATGCCAGAGGCCGGAATCCCTGACAACCCAA-TTGCTGTCATCACCGTGGCTAAAA---------------CAAGGCGCTTGGCGTCTAGAAAAGCTGATCTGTAGGAAATTTCCAATAGAGTTCAATTTTTTCTGAGTTTAAAGTATACCATATCATCAAGGTCAGACACTCGAGAT-AAACTAGGCTTGCATTTAAATAGAATAAAAATAG--------TTGAAGAGT---------------------------------------------------------------AGTAAG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192450941 329 - 192599291 TTTGCCTAGTTACACCTCAAGGCAACCTCCTGGCAGGCCAGCCTTAAGTCCAGCAGTCCAACCATGCATCTAAGCTGAGTTCTCATCAGAGCCAACTTCAATCATAAACAACTGAGATGATGCCAGAGGCCAAAATCCCTGAGAACCCAATTTGTTGTCATCACTGTGGCCAAAA---------------CAAGGTGCTTGGCATCTAGAAAAGCTGATCTGTAGGAAATTTTTAATAGAGTTCAATTTTTTCTAAGTTTAAAGTGTACAAT---ATGAAGATCAGACACCTGAGATAAAACTAGACTTGCATTTAAATAGAATAAAAATAT--------TTGAAGAAT---------------------------------------------------------------AGTAAG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289585 329 + 192460366 TTTGCCTAGTTACATCTCAAGGCAACCTCCTGGCAGGCCAGCCTTAAGTCCAGCAGTCCAACCATGCATCTAAGCTGAGTTCTCATCAGAGCCAACTTCAATCATAAACAACTGAGATGATGCCAGAGGCCAAAATCCCTGAGAACCCAATTTGTTGTCATCACTGTGGCCAAAA---------------CAAGGTGCTTGGCATCTAGAAAAGCTGATCTGTAGGAAATTTTTAATAGAGTTCAATTTTTTCTAAGTTTAAAGTGTACAAT---ATGAAGATCAGACACCTGAGATAAAACTAGACTTGCATTTAAATAGAATAAAAATAT--------TTGAAGAAT---------------------------------------------------------------AGTAAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187260691 329 - 187378091 tttGCCTAGTTACACCTCAAGGCAACCTCCTGGCAGGCCAGCCTTAAGTCCAGCAGTCCAACCATGCATCTAAGCTGAGTTCTCATCAGAGCCAACTTCAATCATAAACAACTGAGATGATGCCAGAGGCCAAAATCCCTGAGAACCCAATTTGTTGTCATCACTGTGGCTAAAA---------------CAAGGTGCTTGGCATCTAGAAAAGCTGATCTGTAGGAAATTTTTAATAGAGTTCAATTTTTTCTAAGTTTAAAGTGTATGAT---ATGAAGATCAGACATCTGAGATAAAACTAGACTTGcatttaaatagaataaaaatat--------ttgaagaat---------------------------------------------------------------agtAAT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101153904 329 + 101219884 TTTGCCTAGTTACACCTCAAGGCAACCTCCTGGCAGGCCAGCCTTAAGTCCCGCAGTCCAACCATGCATCTAAGCTGAGTTCTCCTCAGAGCCAACTTCAATTATAAACAACTGAGATGATGCCAGAGGCCAAAATCCCTGAGAACCCAATTTGTTGTCATCACTGTAGCTAAAA---------------CAAGGTGCTTGGCGTCTAGAAAAGCTAATCTGTAGGAAATTTTTAATAGAGTTCAATTTTTTCTAAGTTTAAAGTGTACGAT---ATGAAGATCAGACACCTGAGATAAAACTAGACTTGCATTTAAATAGAATAAAAATAT--------TTGAAGAAT---------------------------------------------------------------AATAAT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11101334 408 +  39895921 CTTGTTGAGTTAGATCTCAAGGCAACCTCTGAGCAGGTCACCCTTAAGCCCAAGTGCCCAATCATGCACCTCAGTGGAGCCCTCATCAAAGATA-----GGTTATAATCAATCAAGACCATACCAGAGGCCAGAGT-TCTGACTACCTGACTTGCTGCTATCATGAGGCCttaaaaaaataaaaaaaaataaaGGTATTTAGCATATAAATAAGCTGATATGTAGGCAATGCCCAATAGAGATCTTTTTTCTTTAGTTTCAAATTTT----TATCATCAGGGCTACAAAACTGGGATAGAGCTAGACTTACATTTAAAGGAGGTAAAAATATACATATTAttaaagatttatttatttattcatgagagacacagactgagaaagagaggcagagacacaggcagagggagaagtagg
i canFam3.chr31                   C 0 I 125
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75501286 510 +  98207768 I
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=112999.000000
s hg38.chr14_KI270722v1_random         7476 40 +    194050 AGTGGTGACTACTTTTACACAGGAATGTTTCAAATAAATT
s panTro4.chr3                    125090797 40 - 202329955 AGTGGTGACTACTTTTACATAGGAATGTTTTAAATAAATT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730652 40 - 202140232 AGTGGTGACTACTTTTACACAGGAATGTTTTAAATAAATT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091890 40 +  86207423 AGTGGTGACTACTTTTACACAGGAATGTTTTAAATAAATT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451270 40 - 192599291 AGTGGTGACTACTTTTACACAGGAATGCTTTAAATAAATT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289914 40 + 192460366 AGTGGTGACTACTTTTACACAGGAATGCTTTAAATAAATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261020 40 - 187378091 AGTGGTGACTACTTTTACACAGGAATGctttaaataaatt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154233 40 + 101219884 AGTGGTGACTACTTTTACACAGGAATGCTTTAAATAAATT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11101867 33 +  39895921 AGTGGTAACTAATTTTACGTAGGAACTTTTT-------TT
i canFam3.chr31                   I 125 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75501286 510 +  98207768 I
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=1168670.000000
s hg38.chr14_KI270722v1_random         7516 398 +    194050 GT------TTTTTTTCT-------------TGTGCCTTTTAAATTTTGTGATTTGTCAATGAGATGCTGACATATTTTTAACGAAG----CATGCCTTGTAAAATAATAAGTGAAT-GAAAACTACACAGTAATATTCACATCAACAAAGCT----AGAAGAAGACTG----TATGTCTCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTGACCAAATTAAGATCCAAATA-------CCAAAAAG-AAAAGTAATTAAAATTTGTGTTGTA--TGCC-TTATA--------AGACCAAA-CCTATAAAATGAGGGGAAACTTCACAATTACTTGGAATTTGCTCTGTGGAATTGTAACAGATGGATTATAAAGATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTTGCTTCATATTTTTATTGTTTTTT-
s panTro4.chr3                    125090837 393 - 202329955 G-------TTTTTTTCT-------------TGTGTCTTTTAAATTTAGTGATTTGTCAATGAGATGCTGACATATTTTTAATGAAG----CATGCCTTGTAAAATAATAAGTGAAT-GAAAAATACACAGTAATATTTACATCAACAAAGCT-------AGAAGACTG----CATGTCTCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTGACCAAATTAAGACCCAAATA-------CCAAAAAG-AAAAGTAATTAAAATTTGTGTTGTA--TGCC-TTACA--------AGACCAAA-CCTATAAAATGAGGGGAAACTTCACAATTACTTGTAATTCGCTCTGTGGAATTGTAACAGATGGATTATAAATATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTTGGTTCATATTTTTATTG-TTTTT-
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159730692 400 - 202140232 G-------TTTTTTTCT-------------TGTGCCTTTTAAATTTTGTGATTTGTCAATGTGATACTGACATATTTTTCATGAAG----CATGCCTTGTAAAATAATAAGTGAAT-GAAAAATACACAGTAATATTTACATCAACAAAGCT----AGAAGAAGACTG----CATGTCCCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTGACCAAATTAAGATCCAAATA-------CCAAAAAGAAAAAGTAAATAAAACTTGTGTTGTA--TGCCTTTACA--------AGATCAAACCCTATAAAATGAGGGGAAACTTCACAATTACTTGTAATTTGCACTGTGGAATCGTAACAGATGGATTATAAAGATGATTCCATGATAAATATCTAAATGTGGTTATTACCTTCTGTGCTTTCTTGGTTCATATTTTTATTCTTTTTT-
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44091930 393 +  86207423 G-------TGTTTTTTT-------------TGTGCCTTTTAAATTTTGTGATTTGTCAATGTGATGCTGACATATTTTTAATGAAG----CATGCCTTGTAAAACGATAAGTGAAT-GAAAAACACACAGTAATATTTACATCAACAAAACT----AGAAGAAGACTG----TGTGTCCCAAGAGGCTCCATCATCCACCCAGT--------GGCCACTTGACCAAATTAAGATCCAAATA-------CCAAAAAG-AAAAGTAAATAAAATTTGTGTTGTA--TGCC-TTACA--------AGACCAAA-CCTATAAAATGAGGGGAAACTCCACAATTA-TTGTAATTTGCTCTGTGCAGTTGTAACAGATGGATTATAAAGATGATTCCATGGTAAACGTCGAAATGTGGTTACTACCTTCTGTGCTTTCTCGGTTCATATTTTTATTTTTT----
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451310 393 - 192599291 G-------TTTTTTTCT-----------------CCTTTAAAATTTTGTGATTTGTCAATGTGATGCTGACATATTTTTAATGAAG----TATGCCTCATAAAATAATAAGTGAAT-GAAAAATATACAGTAATATTTACATCAACAAAGCT----AGAAGAAGACTG----TATGTCCCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTAACCAAATTAAGATCCAAATA-------CCAAAAAG-AAAAGCAAATAAAATTTGTGTCATA--TGCT-TTACA--------AGACCAAA-CCCATGAAATGAGGGGAAACTTCACAATTACTTGTAATTCGCTCTGTGGAATTGTGACAGATGGATTGTAAAGATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTTGGTTCATATTTTTAACGTTTTCT-
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192289954 393 + 192460366 G-------TTTTTTTCT-----------------CCTTTAAAATTTTGTGATTTGTCAATGTGATGCTGACATATTTTTAATGAAG----TATGCCTCATAAAATAATAAGTGAAT-GAAAAATATACAGTAATATTTACATCAACAAAGCT----AGAAGAAGACTG----TATGTCCCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTAACCAAATTAAGATCCAAATA-------CCAAAAAG-AAAAGCAAATAAAATTTGTGTCATA--TGCT-TTACA--------AGACCAAA-CCCATGAAATGAGGGGAAACTTCACAATTACTTGTAATTCGCTCTGTGGAATTGTGACAGATGGATTGTAAAGATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTTGGTTCATATTTTTAACGTTTTCT-
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261060 392 - 187378091 g-------tttttttct-----------------cctttaaaattttGTGATTTGTCAATGTGATGCtgacatatttttaatgaag----tatGCCTCATAAAATAATAAGTGAAC-GAAAAATATACAGTAATATTTACATCAACAAAGCT----AGAAGAAGACTG----TATGTCCCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTAACCAAATTAAGATCCAAATA-------ccaaaaag-gaaagcaaatacaATTTGTGTCACA--TGCT-TTACA--------AGACCAAA-CCCATGAAATGAGGGGAAACTTCACAATTACTTGTAATTTGCTCTGTGGAATTGTGACAGATGGATTGTAAAGATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTtggttcatatttttaat-tttttt-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154273 394 + 101219884 GT------TTTTTTTCT-----------------CCTTTTGAATTTTGTGATTTGTCAATGTGGTGCTGACATATTTTTAATGAAG----TATGCCTCATAAAATAATAAGTGAAT-GAAAAATATACAGTAATATTTACATCAACAAAGCT----AGAAGTAGACTG----TGTGTCCCAAGAGGCTCCATCATCTACCCAGT--------GGCCACTTAACCAAATTAAGATCCAAATA-------CCAAAAAG-AAAAGCAAATAAAATTTGTGTCATA--TGCT-TTACA--------AGACAAAA-CCCATGAAATGAGGGGAAACTTCACAATTACTTGTAATTTGCTCTGTGGAATTGTGACAGATGGATTGTAAAGATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTTGGTTCATATTTTTAACGCTTTTT-
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75501796 407 +  98207768 -gctgagcttcacatct-----------------tctCTCAAGTTC-ATGATATGTTAATGTAATTCTTATAGA--------GAAA----TATGCTTT-TAAAATAATACATGGATGGAAAAAAACACTATTAGAGCTACATCATCAAAACT----ATAAGAAGACTGTCTCTGTGTCCCATGAGAACCCACCACCTACTTGCTTCAAATTAAGCCATACTA-CAAATAAAATTACAAATAAAAATCTCAAACAAC-AAACGCTACTAAAATTTGTATTATG--TGCC-TTAGA--------AGCTCAGA-TATAT-AAATGAATAAAAATGTTCCAATTACTCTTATTTTTCTCTAGGGAACTGCAACAGATGGATTATAAAGATGATTCCATGATAAACATCTAAATGTGGTTACTACCTTCTGTGCTTTCTTGGTTCATACTTTCATTGTTTTCT-
i mm10.chr16                      I 510 C 0
s canFam3.chr31                    11101900 415 +  39895921 --------TTTTTTTTTACCTAGGTTTCTTTGTGGCTTTTAAATTTTATGATTTGTTGATATAATGCT--CTCTTTTTAAATGAAGGTTTTTTGTTTTTTTTAATAAAAAGAGAAT-GGAAAATAC-------TACTGTCATCATCAAAAGTGTGGGGAAGCCATCTG----TATGTTCCACAAGCCTCCATCATCCACCCGGT--------AGCCATTTACCCAAATTAAAATCCAAATG-----------GGGA-AAAAGTAAATAATATTTGTGTTGTACTTGCC-TTACAAGCTTCACAGCCCAAA-TCTATAAAATGAGGAGAAACTTCCTAATTATTCATAATTTGCTCTGTGGAGTTGAAACAGATGGATTATAAAGATGATTCCATGATAAACAACTAAATGTGGTTACTACCTTCTGTGCTTTCTTGGTTCATATTTTTATTGTTTTTTT
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122130245 1969 - 199944510 I

a score=5005.000000
s hg38.chr14_KI270722v1_random         7914 1 +    194050 T
s panTro4.chr3                    125091230 1 - 202329955 T
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122132214 1 - 199944510 T
i gorGor3.chr3                    I 1969 I 1167
s ponAbe2.chr3                    159731092 1 - 202140232 T
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092323 1 +  86207423 T
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451703 1 - 192599291 T
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290347 1 + 192460366 T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261452 1 - 187378091 t
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154667 1 + 101219884 T
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75502203 1 +  98207768 T
i mm10.chr16                      C 0 I 3
s canFam3.chr31                    11102315 1 +  39895921 T
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I

a score=217784.000000
s hg38.chr14_KI270722v1_random         7915 76 +    194050 CTTTATAAACAGATAATTCATTCCTATCTATGGCAATGCAAACTTTTCTGATGTATTGAATATGTCATAG-------TTTTTT
s panTro4.chr3                    125091231 77 - 202329955 CTTTATAAACAGATAATTCATTCTTATCTATGGCAATGCAAAATTTTCAGATGTATTGAATATGTCATGGT------TTTTTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731093 76 - 202140232 CTTTATAAACAGATAATTCATTCTTATCTATGGCAATGCAAAATTTTCAGATGTATTGAATATGTCATAG-------TTTTTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092324 76 +  86207423 CTTTATAAACAGATAATTCATTCTTATTTATGGCAATGCAAAATTTTCAGATGTATTGAATATGTCATAG-------TTTTTT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451704 76 - 192599291 CTTTATAAACAGATAATTCATTCTTATCTATGGCAATGTAAAATTTTCAGATGTTTTGAACATGTCATAC-------TTTTTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290348 76 + 192460366 CTTTATAAACAGATAATTCATTCTTATCTATGGCAATGTAAAATTTTCAGATGTTTTGAACATGTCATAC-------TTTTTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261453 76 - 187378091 ctttataaacagaTAATTCACTCTTATCTATGGCAATGCAAAATTTTCAGATGTTTTGAATATGTcatac-------tttttt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154668 76 + 101219884 CTTTATAAACAGATAATTCATTCTTATCTATGGCAAAGCAAAATTTTCAGATGTTTTGAATATGTCATAC-------TTTTTT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75502207 79 +  98207768 CTTTGC-AACAGGCAA---AACTTTTTCTGAAGCAATGAAGAACTTACAGCTGCACTGAATGTTACATAGCTACATATTTTTC
i mm10.chr16                      I 3 C 0
s canFam3.chr31                    11102316 74 +  39895921 CTTCATAAGCAGATAATACTTTCTTTTCTGTAGC--TACAAAATTTGTAGCTGCATTGGAAATGTCACAG-------TTTTTT
i canFam3.chr31                   C 0 I 6
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19568842 3367 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122132215 1167 - 199944510 I

a score=3785.000000
s hg38.chr14_KI270722v1_random         7991 1 +    194050 T
s panTro4.chr3                    125091308 1 - 202329955 T
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19572209 1 -  19803153 t
i panPan1.JH650580                I 3367 I 1092
s ponAbe2.chr3                    159731169 1 - 202140232 T
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092400 1 +  86207423 C
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451780 1 - 192599291 T
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290424 1 + 192460366 T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261529 1 - 187378091 t
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154744 1 + 101219884 T
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75502286 1 +  98207768 T
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11102396 1 +  39895921 T
i canFam3.chr31                   I 6 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122132215 1167 - 199944510 I

a score=490684.000000
s hg38.chr14_KI270722v1_random         7992 172 +    194050 CTATTGTAGGCATCTCTA--AAAAAGGTATAGAAAACAAACAGAGAAAAGTCTGATGTTGGAAAGG--AGAGAGAAATAAAGCTTGTAAAGGAA-TGAAGATTAGATCTTTCTGGAGATAAAAATTCTTAGAAGATACAAAAGGTAGT----TACTGAATTAGATGAAGGTTCTTTTTCAG
s panTro4.chr3                    125091309 172 - 202329955 CTATTGTAGGCGTCTCTA--AAAAAGGTACAAAAAACAAACACAGCAAAGTCTGGTGTTGGAAAGG--AGAGAGGAATAAAGCTTGTAAAGGAA-TGAAAATCAGAGCTTTCTGGAGACAAAAATTCTTAGAAGATACAAAAGCTAGT----TACTGAATTAGATGAAGGTTCTTTTTCAG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731170 171 - 202140232 CTATTGTAGGTATCTCTA--AAAAAGTTAGAG-AAACAAACAGAGCAAAGTCTGGTGTTGGAAAGG--AGAGAGAAATAAATCTTGTAAAGGAA-TGAAAATTAGAGCTTTCTGGAGACAAAAATTCTTAGAGGACACAAAAGGTAGT----TACTGAATTAGATGAAGGTTCTTTTTCAG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092401 171 +  86207423 CTATTGCAGGCGTCTCTA--AAAAAGGTAGAGAAAACAAACAGAGCAAAGTCTGGTG-TGGAAAGG--AGAGAGAAATAAAGCTTGTAAAGGAA-TGAAAATTAGAGCTTTTTGGAGACAAAAATTCTTAGAAGATACAAAAGCTAGT----TACTGAATTAAATGAAGGTTCTTTTTCAG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451781 173 - 192599291 CTATTGTAGGCGTCTCTG-TAAAAAGGTGGAGAAAACAAACAGGGAAAAGTCTGGTGTTGGAAAGG--AGAGAGAAATAAAACTTGTAATGGAA-TGAAAATTAGAGCTTTTTGTAGACAAAAATTCTTAGAAGATACAAAAACTAGT----TACTGAATTGGATGAAGGTCCTTTTTCAG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290425 173 + 192460366 CTATTGTAGGCGTCTCTG-TAAAAAGGTGGAGAAAACAAACAGGGAAAAGTCTGGTGTTGGAAAGG--AGAGAGAAATAAAACTTGTAATGGAA-TGAAAATTAGAGCTTTTTGGAGACAAAAATTCTTAGAAGATACAAAAACTAGT----TACTGAATTGGATGAAGGTCCTTTTTCAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261530 173 - 187378091 ctattgtagGCGTCTCTG-TAAAAAGGTGGAGAAAACAAACAGGGAAAAGTCTGATgttggaaagg--agagagaaataaaacttgGAATGGAA-TGAAAATTAGAGCTTTTTGGAGACAAAAATTCTTAGAAGATACAAAAACTAGT----TACTGAATTGGATGAAggttctttttcag
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154745 170 + 101219884 CTATTGTAGGCGTCTCTG-TAAAAAGGTAGAGAAAACAAACAGGGAAAAGTCTG--GTTGGAAAGG--AGAGAGAAATAAAACTTGTAATGGAA-TGAAAATTAGAGCTTTTTGGACACAAAAATTCTTAGAAGATACAAAAACTAGT----TACTGAATTGGATGAA-GTTCTTTTTCAG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75502287 173 +  98207768 TTATTGTAGGTGTCTCTT-TAAAAGGGTAGAGAAAACAAATAGAGGAAAAGCTCATGTTGGAAAAG--GAAACGAAAATGCAGTTTAAAATAAA-TAAAAAGAAAAGGGTTTTGCAC---AAACTTCTTAGGATA-ATGGAAGCTAGTGAACTAGTTAATTAGATtctggttcttctctag
i mm10.chr16                      C 0 I 425
s canFam3.chr31                    11102397 169 +  39895921 TTACTGTAGGTGTCTATTTTTAAAAGGTAGAGAAAACAAACAGG--AAAGTCTGGTGTGGGAAAGGGTAAAGAAAAATAAAGCTTGAAGAGGAAGTGAGAATTA------TTTGAAAACAAAAATTCGTAAGAGAGACAGGAGCTAGT----TACTTAACTAGACTAAGGTTCTTTTCTAG
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122132215 1167 - 199944510 I

a score=371785.000000
s hg38.chr14_KI270722v1_random         8164 150 +    194050 TTTTTCCCAGTCGTTCATCTCTTAGAAGGCACATATTCACAGCAGAAAAGAAAAAAAGTGTTAAAAAGAAAATACCTTGGTGTAGTGAGACTG-TAATTTCATGAGGGCATTACTGAAGACTCA-CTTTTTCCAGCATCACTCAGCATGGTA
s panTro4.chr3                    125091481 150 - 202329955 TTTTTCCCAGTTGTTCATCTCTTAGAAGGCACATATTCACATCAGAAAAGAAAGAAAGGGTTAAAACGAAAATACCTCCGTATAGTGAGACTG-TAATTTCACGAAGGCATTACTGAAGACTCA-CCTTTTCCAGCATCACTCAGCATGGTA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731341 150 - 202140232 TTTTTCCCATTTGTTCATGTCTTAGAAGTCACTTATTCACCGCAGAAAATAAAGAAAGGGTTAAAAAGAAAATACATCAGTGTAGTGAGACTG-TAATTTCATGAAGGCATTACTGAAGACTCA-CCTTTTCCAGCATCACTCAGCATGGTA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092572 143 +  86207423 TTTTTCCCACTTGTTCATCTCTT---AGGCACTTATTCACAGCAGA----AAAGAAAGGTTTAAAAAGAAAATATCTCAGTGTGGTGAGACTG-TAACTTCATGAAGGCATCACTGAAGACTCA-CCTTTCCCAACATCACTCAGTATGGTA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192451954 146 - 192599291 TTTTTCCCACTTGTTCATCTCTTAGAAGGCACTTATTCACAGCAGA----AAAGAAAGGGTCAGAAAGGAAATACCTCGGTGTAGTGAGACGG-TAGTTTCATGAAGGCATTGCTGAAGGCTCA-CCTCTTCTAGCACCACTCAGCATGGTA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290598 146 + 192460366 TTTTTCCCACTTGTTCATCTCTTAGAAGGCACTTATTCACAGCAGA----AAAGAAAGGGTCAGAAAGGAAATACCTCGGTGTAGTGAGACGG-TAGTTTCATGAAGGCATTGCTGAAGGCTCA-CCTCTTCTAGCACCACTCAGCATGGTA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261703 144 - 187378091 tttttcccactTGTTCATCTCTTAGAAGGCACTTATTCACAGCAGA----AAAGAA--GGTCAGAAAGGAAATACCTCGGTGTAGTGAGACTG-TAGTTTCATGAAGGCATTGCTGAAGGCTCA-CCTCTTCCAGCACCACTCAGCATGGTG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101154915 146 + 101219884 TTTTTCCCACTTGTTCATCTCTTAGAAGGCACTTATTCATAGCAGA----AAAGAAAGGGTCAAAAAGAAAATACCTCGGTGTAGTGAGACTG-TAGTTTCATGAAGGCATTACTGAAGGCTCA-CCTCTTCCAGCACCACTCAGCATGGTA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11102566 152 +  39895921 GTTTTCCTGTTTGTTCATCTCTTGGAAGACATTTATTGATAGCAGAAAAGAAAGAGGGGTTTAAAAATAAAATACTTAGGTGTGATGAGACTGACCATTTCATGAAGATGTTCCTGAAGATGCACCCTTTTCTAGCACTACTTAACCTGGCA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75502460 425 +  98207768 I
e gorGor3.chr3                    122132215 1167 - 199944510 I

a score=407649.000000
s hg38.chr14_KI270722v1_random         8314 146 +    194050 TTATGCATGTGTGTAATGTAAAGGAAAGTGAATACGCATTCTTGGATGGGTGATCAAATGGTAATT-CCAGAATATAATCAGAAGCTGATTCATTATCCTCTTGAGATTTCACAATCTTTCTATCAGGAATT-AAAATTCAGAAGAGG
s panTro4.chr3                    125091631 146 - 202329955 TTATGCATGTGTGTAATGTAAAGGAAAGTGAATACTCATTCTTGGATGGGTGATCAAATCATGATT-CCAGAATATAATCAGAAGCTGATTCATTATCCTCTTCAGATTTCACAATCTTTCCATCAGGAATT-AAAATTCAGAAGAGG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731491 145 - 202140232 TTATGCATGCATGTAATGTAAAGGAAAGTGAATACTCATTCTTGGATGGGTGATCAAATCATGATT-CCAGAATAT-ATCAGAAGCTGATTCATTATCCTCTTGAGATTTTACAATCTTTCCATCAGGAATT-AAAATTCAGAAGAGA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092715 146 +  86207423 TTACACATGTGTGTAATGTAAAGGAAAGTGAATACGCATTCTTGGATGGGTGACCAAATCGTGGTT-CCAGAATATAATCAGAAGCTGATTCATTATCCTCTCGAGATTTCATAATCTTTGCATCAGGAATT-AAAATTCAGAAGAGG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452100 142 - 192599291 TTAAGAATGC----AACGTAAAGAAAAGTGAATACACATTCTTGGATGGGTGATCAAATCGTGACT-CCAGAATATAATCAGATGCTGAATCATTATCCTCTTGAGATTTCATAATCTTTGCATCAGGAATT-AAAATTCAGAAGAGG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290744 142 + 192460366 TTAAGAATGC----AACGTAAAGAAAAGTGAATACACATTCTTGGATGGGTGATCAAATCGTGACT-CCAGAATATAATCAGATGCTGAATCATTATCCTCTTGAGATTTCATAATCTTTGCATCAGGAATT-AAAATTCAGAAGAGG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261847 142 - 187378091 TTAAGAATGC----AACGTAAAGAAAAGTGAATACACATTCTTGGATGGGTGATCAAATCGTGACT-CCAGAATATAATCAGATGCTGATTCATTATCCTCTTGCGATTTCATAATCTTTGCATCAGGAATT-AAAATTCAGAAGAGG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155061 142 + 101219884 TTAAGAATGC----AATGTAAAGAAAAGTGAATACACATTCTGGGATGGGTGATCAAATCGTGACT-CCAGAATATAATCAGATGCTGATTCATTATCCTCTTGAGATTTCATAATCTTTGCATCAGGAATT-AAAATTCAGAAGAGG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75502885 141 +  98207768 TTATGTATTTCAGCAATATAAAGGGACATTCATACACATTGTGGCATGGGAGATCAAAGCATGCTT-CTAGGG-ACAGAAAGAGGAT--TTCATTATCTGCTCAAAACTTGATATCCAATATACTTAGAACT-ATAAATCAG--GAGG
i mm10.chr16                      I 425 C 0
s canFam3.chr31                    11102718 148 +  39895921 TTATGTATGTGTGCAATGTGAAGGAAAATTAACACACATTGTTGGACGGATGATCAGATCGTGATTCCCAGAATAGAATCAGACACTGATTCATTTTTCTCTTGAGATCCCATAATCTTAGTATCTAAAATTGAAAATTCAAAGGAAG
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122132215 1167 - 199944510 I

a score=74270.000000
s hg38.chr14_KI270722v1_random         8460 31 +    194050 GTAAATGTATCTAATCGTTTGAAAGTTAAAA
s panTro4.chr3                    125091777 31 - 202329955 GTGAATGCATCTAATCTTCTGAAAGTTAAAA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731636 31 - 202140232 GTGAATGTATCCAGTCTTTTGAAAGTTAAAA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092861 31 +  86207423 GTGAATGTATCTAATCTTTTGAAAGTTAAAA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452242 31 - 192599291 GTGAATGTATCTAATCTTTTGAAAGTTAAAA
i rheMac3.chr2                    C 0 I 2
s macFas5.chr2                    192290886 31 + 192460366 GTGAATGTATCTAATCTTTTGAAAGTTAAAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187261989 31 - 187378091 GTGAATGTATCTAATCTTTTCAAAGTTAAAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155203 31 + 101219884 GTGAATGTGTCTAATCTTTTGAAAGTTAAAA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503026 31 +  98207768 TAAAATGTGTCTTTCCAGTGGAGCATTACAG
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866  0 +  39895921 C
e gorGor3.chr3                    122132215 1167 - 199944510 I

a score=-1809.000000
s hg38.chr14_KI270722v1_random         8491 2 +    194050 -AT
s panTro4.chr3                    125091808 2 - 202329955 -AT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731667 2 - 202140232 -AT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44092892 2 +  86207423 -AT
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192290917 2 + 192460366 -CT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262020 2 - 187378091 -CT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155234 2 + 101219884 -CT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503057 2 +  98207768 AA-
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e gorGor3.chr3                    122132215 1167 - 199944510 I
e rheMac3.chr2                    192452273 2 - 192599291 I

a score=1820.000000
s hg38.chr14_KI270722v1_random         8493 2 +    194050 TA
s panTro4.chr3                    125091810 2 - 202329955 TA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731669 2 - 202140232 TA
i ponAbe2.chr3                    C 0 C 0
s chlSab2.chr22                   101155236 2 + 101219884 TA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503059 2 +  98207768 TA
i mm10.chr16                      C 0 I 7
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e gorGor3.chr3                    122132215 1167 - 199944510 I
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=600.000000
s hg38.chr14_KI270722v1_random         8495 1 +    194050 g
s panTro4.chr3                    125091812 1 - 202329955 g
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731671 1 - 202140232 G
i ponAbe2.chr3                    C 0 C 0
s chlSab2.chr22                   101155238 1 + 101219884 G
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e gorGor3.chr3                    122132215 1167 - 199944510 I
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=137783.000000
s hg38.chr14_KI270722v1_random         8496 589 +    194050  
s panTro4.chr3                    125091813 586 - 202329955  
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159731672 603 - 202140232  
i ponAbe2.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866   0 +  39895921 C
e mm10.chr16                       75503061   7 +  98207768 I
e gorGor3.chr3                    122132215 1167 - 199944510 I
e chlSab2.chr22                   101155239   0 + 101219884 C
e papAnu2.chr2                    187262022   0 - 187378091 C
e macFas5.chr2                    192290919   0 + 192460366 C
e rheMac3.chr2                    192452273   2 - 192599291 I
e nomLeu3.chr21                    44092894   0 +  86207423 C

a score=546.000000
s hg38.chr14_KI270722v1_random         9085 1 +    194050 a
s panTro4.chr3                    125092399 1 - 202329955 a
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122133382 1 - 199944510 a
i gorGor3.chr3                    I 1167 I 3871
s ponAbe2.chr3                    159732275 1 - 202140232 a
i ponAbe2.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e chlSab2.chr22                   101155239 0 + 101219884 C
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=-137.000000
s hg38.chr14_KI270722v1_random         9086 1 +    194050 c
s panTro4.chr3                    125092400 1 - 202329955 a
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159732276 1 - 202140232 a
i ponAbe2.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19572210 1092 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239 0 + 101219884 C
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=546.000000
s hg38.chr14_KI270722v1_random         9087 1 +    194050 a
s panTro4.chr3                    125092401 1 - 202329955 a
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19573302 1 -  19803153 a
i panPan1.JH650580                I 1092 I 2585
s ponAbe2.chr3                    159732277 1 - 202140232 a
i ponAbe2.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239 0 + 101219884 C
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=137184.000000
s hg38.chr14_KI270722v1_random         9088 571 +    194050  
s panTro4.chr3                    125092402 572 - 202329955  
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159732278 571 - 202140232  
i ponAbe2.chr3                    C 0 I 6617
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19573303 2585 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866   0 +  39895921 C
e mm10.chr16                       75503061   7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239   0 + 101219884 C
e papAnu2.chr2                    187262022   0 - 187378091 C
e macFas5.chr2                    192290919   0 + 192460366 C
e rheMac3.chr2                    192452273   2 - 192599291 I
e nomLeu3.chr21                    44092894   0 +  86207423 C

a score=164146.000000
s hg38.chr14_KI270722v1_random         9659 2024 +    194050  
s panTro4.chr3                    125092974 2015 - 202329955  
i panTro4.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19573303 2585 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866    0 +  39895921 C
e mm10.chr16                       75503061    7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239    0 + 101219884 C
e papAnu2.chr2                    187262022    0 - 187378091 C
e macFas5.chr2                    192290919    0 + 192460366 C
e rheMac3.chr2                    192452273    2 - 192599291 I
e nomLeu3.chr21                    44092894    0 +  86207423 C

a score=273.000000
s hg38.chr14_KI270722v1_random        11683 1 +    194050 t
s panTro4.chr3                    125094989 1 - 202329955 t
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19575888 1 -  19803153 t
i panPan1.JH650580                I 2585 I 403
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239 0 + 101219884 C
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=33370.000000
s hg38.chr14_KI270722v1_random        11684 401 +    194050 gaaaagatcaacaaaattgacagaccactagcaagaccaataaagaagaaaagagagaagaatcaaatagatgcaataaaaattgacaaaggggatatcaccaccgatcccacagaaatacaaactacaatcagagaatactataaacacctctacacaaataaactagaaattctagaagaaatggataaattccttgacacatatactctcccaagactaaaccaggaagaagttgaacctctgaatagacaaataaaacgctctgaaattgaggcaataattaatagcttaccaacc-aaaaaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaa
s panTro4.chr3                    125094990 402 - 202329955 gaaaagatcaacaaaattgacagaccactagcaagactaataaagaagaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccacagatcccacagaaatacaaactaccatcagagaatactataaacacctctacacaaacaaactagaaaatctagaaaaaatggataaattcctcgaaacatacactctcccaagactaaacaaggaggaagttgaatctctgaatagaccaataacgagctctgaaattgaggcaataattaatagcttaacaaccaaaaaaaagtccaggaccagatggactcacagctgaattctaccagaggtacaaggaggaagtggtaccattccttctgaaactattccaatcagtaaaaaa
i panTro4.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19575889 403 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866   0 +  39895921 C
e mm10.chr16                       75503061   7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239   0 + 101219884 C
e papAnu2.chr2                    187262022   0 - 187378091 C
e macFas5.chr2                    192290919   0 + 192460366 C
e rheMac3.chr2                    192452273   2 - 192599291 I
e nomLeu3.chr21                    44092894   0 +  86207423 C

a score=273.000000
s hg38.chr14_KI270722v1_random        12085 1 +    194050 a
s panTro4.chr3                    125095392 1 - 202329955 a
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19576292 1 -  19803153 a
i panPan1.JH650580                I 403 I 878
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239 0 + 101219884 C
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=73586.000000
s hg38.chr14_KI270722v1_random        12086 876 +    194050  
s panTro4.chr3                    125095393 878 - 202329955  
i panTro4.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19576293 878 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866   0 +  39895921 C
e mm10.chr16                       75503061   7 +  98207768 I
e gorGor3.chr3                    122133383 3871 - 199944510 I
e chlSab2.chr22                   101155239   0 + 101219884 C
e papAnu2.chr2                    187262022   0 - 187378091 C
e macFas5.chr2                    192290919   0 + 192460366 C
e rheMac3.chr2                    192452273   2 - 192599291 I
e nomLeu3.chr21                    44092894   0 +  86207423 C

a score=1746.000000
s hg38.chr14_KI270722v1_random        12962 3 +    194050 gga
s panTro4.chr3                    125096271 3 - 202329955 gga
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19577171 3 -  19803153 gga
i panPan1.JH650580                I 878 I 2026
s gorGor3.chr3                    122137254 3 - 199944510 gga
i gorGor3.chr3                    I 3871 I 2569
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866 0 +  39895921 C
e mm10.chr16                       75503061 7 +  98207768 I
e chlSab2.chr22                   101155239 0 + 101219884 C
e papAnu2.chr2                    187262022 0 - 187378091 C
e macFas5.chr2                    192290919 0 + 192460366 C
e rheMac3.chr2                    192452273 2 - 192599291 I
e nomLeu3.chr21                    44092894 0 +  86207423 C

a score=123271.000000
s hg38.chr14_KI270722v1_random        12965 1633 +    194050  
s panTro4.chr3                    125096274 1586 - 202329955  
i panTro4.chr3                    C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11102866    0 +  39895921 C
e mm10.chr16                       75503061    7 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e chlSab2.chr22                   101155239    0 + 101219884 C
e papAnu2.chr2                    187262022    0 - 187378091 C
e macFas5.chr2                    192290919    0 + 192460366 C
e rheMac3.chr2                    192452273    2 - 192599291 I
e nomLeu3.chr21                    44092894    0 +  86207423 C

a score=3134.000000
s hg38.chr14_KI270722v1_random        14598 23 +    194050 cttaaaatataat---------aataaaaaaa
s panTro4.chr3                    125097860 23 - 202329955 cttaaagcataat---------aataaaaaaa
i panTro4.chr3                    C 0 I 3
s canFam3.chr31                    11102866 32 +  39895921 TTTAAGATATAATTTTGCCCCAAATTAAAAAC
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75503061  7 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e chlSab2.chr22                   101155239  0 + 101219884 C
e papAnu2.chr2                    187262022  0 - 187378091 C
e macFas5.chr2                    192290919  0 + 192460366 C
e rheMac3.chr2                    192452273  2 - 192599291 I
e nomLeu3.chr21                    44092894  0 +  86207423 C

a score=5001.000000
s hg38.chr14_KI270722v1_random        14621 3 +    194050 TAA
s panTro4.chr3                    125097886 3 - 202329955 TAA
i panTro4.chr3                    I 3 C 0
s nomLeu3.chr21                    44092894 3 +  86207423 TAA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452275 3 - 192599291 TAA
i rheMac3.chr2                    I 2 C 0
s macFas5.chr2                    192290919 3 + 192460366 TAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262022 3 - 187378091 TAA
i papAnu2.chr2                    C 0 C 0
s canFam3.chr31                    11102898 3 +  39895921 CAA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75503061 7 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e chlSab2.chr22                   101155239 0 + 101219884 C

a score=60378.000000
s hg38.chr14_KI270722v1_random        14624 28 +    194050 CAGGAGACTTTTA-TACAGATAAATTTGC
s panTro4.chr3                    125097889 28 - 202329955 CAGGAGCCTTTTA-TACAGATAAGTTTGC
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44092897 28 +  86207423 CAGGAGCCTTTCA-TACAGATAAATTTGC
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452278 28 - 192599291 CAGGAGCCTTTTA-TACAGATAAATTTGC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192290922 28 + 192460366 CAGGAGCCTTTTA-TACAGATAAATTTGC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262025 28 - 187378091 CAGGAGCCTTTTA-TACAGATAAACTTGC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155239 28 + 101219884 CAGGAGCCTTTTA-TACAGATAAATTTGC
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11102901 29 +  39895921 CAAGAGTCCATTATTACAGATAAATGTGT
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e mm10.chr16                       75503061  7 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=372322.000000
s hg38.chr14_KI270722v1_random        14652 180 +    194050 TTTGCATCATGATCAGCACTAAAGTGCATCATAGATTTAAACCATATTTACACAGTTAAAACAATGTAACCAAATATGCAATA-TATTATGTAACATTCTACAAGATGC-TTTCAAACATGCAAACTGACCTTTAAAACAATTTTGCATAAAAGAACATTTCTAGGTAAGAGAAAAGACAGA
s panTro4.chr3                    125097917 181 - 202329955 TTTGCACCATGATCAGCATTAAAGAGCATCATAGATTTAAACCATATTTACACAGTTAAAACAATATAACCAAATATGCAATA-TATTATGTAACATTGTACAAGATGCTTTTCAAACATGCAAACTGACCTTTAAAACAATTTTTCATAAAATAACATTTTTAGGTAAGAGAAAAGACAGG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44092925 176 +  86207423 TTTGCCTCATGATCAGCACTAAAGAGTATCATAGATTTAAACCATATTTACACAGTTAAAACAACACAGCCAAATATGAAAAA-TGTTATGTAACATTGTACAAGATGC-TTTCAAACATGCAAACTGACCTTTAAAACAATTTTTCATAAAATAACATTTTTAGGTAAGAGAAAAGA----
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452306 181 - 192599291 TTTGCATCATGATCGGCACTAAAGAACATCATAGATTCAAACCATATTTACATAGTTAAAACAATATAACCAAATATGCAACA-TATTGTGTAACATTGTACAAGATGGTTTTCAAACATACAAACTGACCTTTAAAACAATTTTTCATAAAATATCATTTTTAGGTAAGAGAAAAGACAGA
i rheMac3.chr2                    C 0 M 178
s macFas5.chr2                    192290950 181 + 192460366 TTTGCATCATGATCGGCACTAAAGAACATCATAGATTCAAACCATATTTACATAGTTAAAACAATATAACCAAATATGCAACA-TATTGTGTAACATTGTACAAGATGGTTTTCAAACATACAAACTGACCTTTAAAACAATTTTTCATAAAATATCATTTTTAGGTAAGAGAAAAGACAGA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262053 181 - 187378091 TTTGCATCATGATCAGCACTAAGGAACATCATAGATTTAAACCATATTTACATAGTTAAAACAATATAACCAAATATGCAACA-TATTGTGTAACATTGTACAAGATGGTTTTCAAACATACAAACTgacctttaaaacaatttttcataaaatatcatttttaggTAAGAGAAAAGACAGA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155267 181 + 101219884 TTTGCATCATGATCGGCACTAAAGAACATCATAGATTTAAACCATATTTACATAGTTAAAACAATATAACCAAATATGCAACA-TATTGTGTAACATTGTACAAGATGGTTTTCAAACATACAAACTGACCTTTAAAACAATTTTTCATAAAATATCATTTTTAGGTAAGAGAAAAGGCAGA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503068 138 +  98207768 TTTGCATCAAGATCAGCATAAAATAGCATTGTAAATATAAAC--TGTTTACATTGCTAAAATAATATAATGAAATGTTGAA----ATTGTGTGGTGTTGAAC-CTAGGCCCTTTACAAATGTATCCTGACCTTAAAA-------TACATCAG------------------------------
i mm10.chr16                      I 7 C 0
s canFam3.chr31                    11102930 174 +  39895921 TTTGTTTTATCCTCAATACTAAAGAACATCATAGATTTAAACAGTATTTACATAGTT-----AATATAATCTAATATTGGATGTTATAGTGTGATGCTGTACAAAATGTTTTTCTGACATTCAAATTGATCTTTAAAGCAATTAT-CATGGGATAA-ATTTGCACATAAAAGAAATGATAT-
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=50232.000000
s hg38.chr14_KI270722v1_random        14832 28 +    194050 CATGTG-GTTAGGGCAAAATATTTCTGTT
s panTro4.chr3                    125098098 28 - 202329955 CATGTG-GTTAGGGCAAAATATTACTGTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093101 28 +  86207423 CATGTG-GTTAGGGCAAAATATTTCTGTT
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192291131 26 + 192460366 --CGTG-GTTAGGGCAAAGTATTTCTGTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262234 26 - 187378091 --CGTG-GTTAGGGCAAAGTATTTCTGTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155448 28 + 101219884 CATGTG-GTTAGGGCAAAGTATTTCTGTT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503206 28 +  98207768 CATATG-GTTGAAGCAAAATGTTTCTGCT
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11103104 27 +  39895921 --TATGAGTTAAGGCAAATTTtttttttt
i canFam3.chr31                   C 0 I 548
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e rheMac3.chr2                    192452487 178 - 192599291 M

a score=40837.000000
s hg38.chr14_KI270722v1_random        14860 44 +    194050 caaattacaaaatactgaatgacaaatcacaggatagaaaaAAA
s panTro4.chr3                    125098126 43 - 202329955 CAAATTACAAAATCCTGAATGACAAATCACAGGATAG-AAAAAA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093129 42 +  86207423 GAAATTACAAAATCCTGAATGACAAATCACAGGATAG--AAAAT
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192291157 42 + 192460366 CAAATTACAAAATCCTGAATGACAAATCACAGTATAG--AAAAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262260 42 - 187378091 CAAATTACAAAACCCTGAATGACGAATCACAgtatag--aaaaa
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155476 42 + 101219884 CAAATTACAAAATCCTGAATGACAAATCACAGTATAG--AAAAA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503234 17 +  98207768 -AAGT----AAGTTGTGAAAAA----------------------
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18013218 9948 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e rheMac3.chr2                    192452487 178 - 192599291 M

a score=2548.000000
s hg38.chr14_KI270722v1_random        14904 1 +    194050 A
s panTro4.chr3                    125098169 1 - 202329955 A
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093171 1 +  86207423 A
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192291199 1 + 192460366 A
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262302 1 - 187378091 a
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155518 1 + 101219884 A
i chlSab2.chr22                   C 0 C 0
s otoGar3.GL873528                 18023166 1 -  38779656 A
i otoGar3.GL873528                I 9948 I 6403
s mm10.chr16                       75503251 1 +  98207768 A
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e rheMac3.chr2                    192452487 178 - 192599291 M

a score=30210.000000
s hg38.chr14_KI270722v1_random        14905 19 +    194050 TTATATTGTACCTGGAATT
s panTro4.chr3                    125098170 19 - 202329955 TTATATTGTACCTGGAATT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093172 19 +  86207423 TTATATTGTACCTGGAATT
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192291200 19 + 192460366 TTATATTGTACCTGGAATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262303 19 - 187378091 ttatattgtacCTGGAATT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155519 19 + 101219884 TTATATTGTACCTGGAATT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503252 19 +  98207768 GTAGATTGTAACTAGAAGA
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e rheMac3.chr2                    192452487 178 - 192599291 M

a score=45008.000000
s hg38.chr14_KI270722v1_random        14924 23 +    194050 TGAAG---TCTTCAAatttatttaga
s panTro4.chr3                    125098189 23 - 202329955 TGAAA---TCTTCAAATTTATTTAGA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093191 23 +  86207423 TGAAG---TCTTCAAATATATTTAGa
i nomLeu3.chr21                   C 0 I 158
s rheMac3.chr2                    192452665 23 - 192599291 TGAAG---TCTTCAAATTTATTTAGA
i rheMac3.chr2                    M 178 C 0
s macFas5.chr2                    192291219 23 + 192460366 TGAAG---TCTTCAAATTTATTTAGA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262322 23 - 187378091 TGAAG---TCTTCAAATTTATTTAGA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155538 23 + 101219884 TGAAG---TCTTCAAATTTATTTAGA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503271 25 +  98207768 TGAAGCTATCTTCATGTCTATTGGG-
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=100861.000000
s hg38.chr14_KI270722v1_random        14947  87 +    194050 tatatgtatctatatg------------------------tattaa-------tagagacata---------------tttaACTGATTATAAGTTTAGAACATTTATATTTTGAAGATGTCATTCTTT--AAAA
s panTro4.chr3                    125098212  89 - 202329955 TATATATATCTATATG------------------------TACTAA-------TAGAGACATA---------------TTTAACTAATTATAAGTTTAGAACATTTATATTTTGAAGATGTCATTCtttaaaaaa
i panTro4.chr3                    C 0 C 0
s rheMac3.chr2                    192452688  84 - 192599291 TCTATGTATGC---TA------------------------TTTTAA-------TAGAGGCATA---------------TTTAACCAATTATAAGTTTATAACATTTATATTTTGAAGATGTCattattt--aaaa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291242  84 + 192460366 TCTATGTATGC---TA------------------------TTTTAA-------TAGAGGCATA---------------TTTAACCAATTATAAGTTTATAACATTTATATTTTGAAGATGTCATTATTT--AAAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262345  84 - 187378091 TCTATGTATGC---TA------------------------TTTTAA-------TAGAGGCATA---------------TTTAACCGATTATAagtttataacatttatattttgaagatgtcattattt--aaaa
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155561  84 + 101219884 TCTATGTATGC---TA------------------------TTTCAA-------TAGAGGCATA---------------TTTAACCGATTATAAGTTTATAACATTTATATTTTGAAGATGTCATTATTT--AAAA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503296 133 +  98207768 CATATTTATCTTCATAAACATGTCAAAAATACTTGGAAGTTTTTAATCAATCCTAAAAATATCCAGTGCAAGTTAACTTCTAACTAATTATGCATTTAGAGTATTTGTATTTGGGAGAGGTCATTTTCT--ATAA
i mm10.chr16                      C 0 I 2
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19577174 2026 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e nomLeu3.chr21                    44093214 158 +  86207423 I

a score=2548.000000
s hg38.chr14_KI270722v1_random        15034 1 +    194050 A
s panTro4.chr3                    125098301 1 - 202329955 a
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19579200 1 -  19803153 a
i panPan1.JH650580                I 2026 I 508
s rheMac3.chr2                    192452772 1 - 192599291 a
i rheMac3.chr2                    C 0 I 1
s macFas5.chr2                    192291326 1 + 192460366 A
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187262429 1 - 187378091 a
i papAnu2.chr2                    C 0 I 1
s chlSab2.chr22                   101155645 1 + 101219884 A
i chlSab2.chr22                   C 0 I 1
s mm10.chr16                       75503431 1 +  98207768 A
i mm10.chr16                      I 2 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e nomLeu3.chr21                    44093214 158 +  86207423 I

a score=90879.000000
s hg38.chr14_KI270722v1_random        15035 71 +    194050 TTATTAATATCTACAGGATTGCTGCAGATATTTTAATTT--TAAACAAATATTTTT--CACTAATGTGACCAGTA
s panTro4.chr3                    125098302 71 - 202329955 ttattaatatttaCAGGATTGCTACAGGTATTTTAATTT--TAAACACATGTTTTT--CACTAATGTGACCAGTA
i panTro4.chr3                    C 0 C 0
s rheMac3.chr2                    192452774 71 - 192599291 atattaatatttataGGATTGCTGCAGAGATTTTAATTT--TAAACACGTATTTTT--CACTAACGTGATCAGCA
i rheMac3.chr2                    I 1 C 0
s macFas5.chr2                    192291328 71 + 192460366 ATATTAATATTTATAGGATTGCTGCAGAGATTTTAATTT--TAAACACGTATTTTT--CACTAACGTGATCAGCA
i macFas5.chr2                    I 1 C 0
s papAnu2.chr2                    187262431 71 - 187378091 atattaatatttataggattgctgcagagattttaattt--taaacacgTATTTTT--CACTAACGTGATGAGCA
i papAnu2.chr2                    I 1 C 0
s chlSab2.chr22                   101155647 69 + 101219884 --ATTAATATTTATAGGATTGCTGCAGAGATTTTAATTT--TAAACACGTATTTTT--CACTAACGTGATCAGCA
i chlSab2.chr22                   I 1 C 0
s mm10.chr16                       75503432 75 +  98207768 TTATTTAAGTTGACCAGATTTTGGTAGTTTGTTTAAATCAATAAATATACATTTTTACTATAAATGTGACAATTA
i mm10.chr16                      C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I
e nomLeu3.chr21                    44093214 158 +  86207423 I

a score=44184.000000
s hg38.chr14_KI270722v1_random        15106 18 +    194050 TTTATATCCTATTTCATT
s panTro4.chr3                    125098373 18 - 202329955 TTTATGTCCTATTTCATT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093372 18 +  86207423 TTTATGTCCTATTTCATT
i nomLeu3.chr21                   I 158 C 0
s rheMac3.chr2                    192452845 18 - 192599291 TTTATGTCCTATTTCATT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291399 18 + 192460366 TTTATGTCCTATTTCATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262502 18 - 187378091 TTTATGTCCTATTTTATT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155716 18 + 101219884 TTTGTGTCCTATTTCATT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75503507 18 +  98207768 TTTATGTCCTATTTCATT
i mm10.chr16                      C 0 I 1167
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=37047.000000
s hg38.chr14_KI270722v1_random        15124 23 +    194050 GAACAGACATTTCAAGATTCTTT
s panTro4.chr3                    125098391 23 - 202329955 AAAGAGACATTTCAAGATTCTTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093390 23 +  86207423 AAAGAGACATTTCAAGATTCTTT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452863 23 - 192599291 AAAGAGACATTTCAAGAGCCTTC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291417 23 + 192460366 AAAGAGACATTTCAAGAGCCTTC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262520 23 - 187378091 AAAGAGACATTTCAAGAGCCTTC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155734 23 + 101219884 AAAGAGACATTTCAAGAGCCTCC
i chlSab2.chr22                   C 0 I 144
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=257851.000000
s hg38.chr14_KI270722v1_random        15147 164 +    194050 TAGAGTTAATTTTTAAAAATTAAGTATCGCACATATTTCTGAAGTACTAACT----TAAA------AAATAAAACTCTTTCCTAGCTTTACATATAGTTaaacattttcataatgactaaaaagataaaaataaattaacaaccataattaaattagaattctactttctatat
s panTro4.chr3                    125098414 162 - 202329955 TGGAGTTAATTTTTAAAAATTAAGTATCACAAATATTTCTGAAGTGCTACCT----TTTA------AAAAAAAACCCTTTCCTGGCTTTCCATATAGTTAAACATTTTCCTAATGACTAAaaag--aaaaataaattaacaaccataattaaattagaattctactttttatat
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093413 164 +  86207423 TAGAGTGAATTTTTAAAAATTAAGTATCACAAATATTTCTGAAGTACTACCT----TAAA------AAAAACAACACTTTCCTGGCTTTTCATATAGTTAAACATTTTCATAATGACTAAAAATATAAAAATAAATTAACAACCATAATTAAATTAGAATTCTACTTTTTATAT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192452886 170 - 192599291 TAGAGTGAATTTTTAGAAATTAAGTGTCACAAATATTTCTGAAGTACTACCT----AAAAAAAAACAAAAAAGAGGCTTTCCTGGTTTTTCATGTAGTTAAACATTTTCATAATGACTAAGAAAGTAAAAATAAATTAATGACCACTACTAAATTAGAATTCTACTTTTTATAC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291440 174 + 192460366 TAGAGTGAATTTTTAGAAATTAAGTGTCACAAATATTTCTGAAGTACTACCTaaaaaaaaaaaaacaaaaaaGAGGCTTTCCTGGTTTTTCATGTAGTTAAACATTTTCATAATGACTAAGAAAGTAAAAATAAATTAATGACCACTACTAAATTAGAATTCTACTTTTTATAC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262543 168 - 187378091 TAGAgtgaatttttagaaattaactgtcacaaatatttctgaagtactacct----aaaaaaaa--aaaaaaaacgctttcCTGGTTTTTCATGTAGttaaacattttcataatgactaagaaagtaaaaataaattaatgaccACTACTAAATTAGAATTCTACTTTTTATAC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101155901 169 + 101219884 TAGAGTGAATTTTTAGAAATTAAGTGTCACAAATATTTCTGAAGTACTACCT----AAAAAAAAA-ACAAAAAACGCTTTCCTGGTTTTTCATGTAGTTAAACATTTTCATAATGACTAAGAAAGTAAAAATAAATTAATGACCACTACTAAATTAGAATTCTACTTTTTATAC
i chlSab2.chr22                   I 144 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 324035 9086 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=9779.000000
s hg38.chr14_KI270722v1_random        15311 4 +    194050 caga
s panTro4.chr3                    125098576 4 - 202329955 caga
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093577 4 +  86207423 CAGA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453056 4 - 192599291 CAGA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291614 4 + 192460366 CAGA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262711 4 - 187378091 CAGA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156070 4 + 101219884 CAGA
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE939969v1                 333121 4 +    345090 TAGA
i tarSyr2.KE939969v1              I 9086 I 5847
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=394364.000000
s hg38.chr14_KI270722v1_random        15315 227 +    194050 tgaaatactatataaaatgtccagaaaatctagtgttaatgaggctgtgcagcctggacatttgatgtctcatctgtgggaatgtgaactaacccaaccattctgaataattattggctctgtgtgttaacagtctagagtcctgaaacaaggatcttaattctaaaataaaatcctattctaagaatataccaagggttgataatcaaggaagtttcaaagttata
s panTro4.chr3                    125098580 226 - 202329955 tgaaatactatataaaatgtccagaaaatctagtgttaatgaggctgtgcagcctggacatttga-gtcccatctgtgggaatgtgaactaacccaaccattctgaataattattggctctgtgtgttaacaggctagagtcctgaaacaaggatcttaattctaaaataaaatcctattccaagaatatgccaagggttgataatcaaggaagtttcaaagttata
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093581 227 +  86207423 TGAAATACTATATAAAATGTCCAGAAAATCTAGTGTTAATGAGGCTGTGCAGCCTGGACATTTGATGTCCCATCTGTGGGAATGTGAATTAACCCAACCATTCTGAATAATTATTGGCTCTGTCTGTTAACAGTCTAGAGTCCTAAAACAAGGATCTTAATTCTAAAATAAAATCCTATTCTAAGAATATGCCAAGGGTTGATAATCAAGGAAGTGTCAAAGTTATA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453060 225 - 192599291 TGAAATACTGTATAAATCATCCAGaaaatctagcattaatgaggctgtgcagccgggacatttcatgtccc--ttgtgggaatgtaaactaacctgaccattctgaataattattggctctgtgtgttaacgggctagagtcctgaaacaaggatcctaattctaaaataaaatcctattctaagaatatgccaagggttgataatcaaggaagtttcaaagttata
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291618 225 + 192460366 TGAAATACTGTATAAATCATCCAGAAAATCTAGCATTAATGAGGCTGTGCAGCCGGGACATTTCATGTCCC--TTGTGGGAATGTAAACTAACCTGACCATTCTGAATAATTATTGGCTCTGTGTGTTAACGGGCTAGAGTCCTGAAACAAGGATCCTAATTCTAAAATAAAATCCTATTCTAAGAATATGCCAAGGGTTGATAATCAAGGAAGTTTCAAAGTTATA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262715 225 - 187378091 TGAAATACTGTATAAATCATCCAGAAAATCTAGCATTAATGAGGCTGTGCAGCCGGAACATTTCATATCcc--ttgtgggaatgtaaactaaccTGACCATTCCGAATAATTATCGGCTCTGTGTGTTAACGGGCTAGAGTCCTGAAACAAGGAtcctaattctaaaataaaatcctattcTAAGAATATGCCAAGTGTTGATAACCAAGGAAGTTTCAAAGTTATA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156074 225 + 101219884 TGAAATACTGTATAAATCATCCAGAAAATCTAGCATTAATGAGGCTGTGCAGCCGGGATATTTCATGTCCC--TTGTGGGCATGTAAACTAACCTGACCATTCTGAATAATTATTGGCTCTGTGTGTGAACGGGCTGGAGTCCTGAAACAAGGATCCTAATTCTAAAATAAAATCCTATTCTAAGAATATGCCAAGGGTTGATAATCAAGGAAGTTTCAAAGTTGTA
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122137257 2569 - 199944510 I

a score=5333.000000
s hg38.chr14_KI270722v1_random        15542 3 +    194050 gag
s panTro4.chr3                    125098806 3 - 202329955 gag
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122139826 3 - 199944510 AAG
i gorGor3.chr3                    I 2569 I 241
s nomLeu3.chr21                    44093808 3 +  86207423 GAG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453285 3 - 192599291 ggg
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291843 3 + 192460366 GGG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262940 3 - 187378091 GGG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156299 3 + 101219884 GGG
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I

a score=3822.000000
s hg38.chr14_KI270722v1_random        15545 2 +    194050 aa
s panTro4.chr3                    125098809 2 - 202329955 aa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093811 2 +  86207423 AA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453288 2 - 192599291 aa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291846 2 + 192460366 AA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262943 2 - 187378091 AA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156302 2 + 101219884 AA
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579201 508 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122139829 241 - 199944510 I

a score=7896.000000
s hg38.chr14_KI270722v1_random        15547 3 +    194050 gaa
s panTro4.chr3                    125098811 3 - 202329955 gaa
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19579709 3 -  19803153 GAA
i panPan1.JH650580                I 508 I 241
s nomLeu3.chr21                    44093813 3 +  86207423 GAA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453290 3 - 192599291 gaa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291848 3 + 192460366 GAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262945 3 - 187378091 GAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156304 3 + 101219884 GAA
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122139829 241 - 199944510 I

a score=394205.000000
s hg38.chr14_KI270722v1_random        15550 235 +    194050 ctttcatcctagcattatatatGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTGCGGAAAAACAAAGAGCCTACAGAATATGTTTCTCTTTGTGTACATCTGTAAATGTACACATCTATCCATGTAAAATTTTACATCTCAGGAGGATAGGTACCAACATGTTAAC-ATGCTATAGCTATAAGATAAGAAATTTTACTTTCCTACAATTTCATacacacacacacaca
s panTro4.chr3                    125098814 231 - 202329955 ccttcatcctagcattatatatGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTGCAGAAAAACAAAGAGCCGACAGAATATGTTTCTCTTTGTGTACAACTGTAAATGTACACATCTATCCATGTAAAAATTTACATCTCAGGAGGATAGGTACCAACATGTTAACAATGCTATATCT-----ATAAGAAATTTTACTTTCCTGCAATTTcatacacacacacacaca
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44093816 235 +  86207423 TCTTCACCCTAACATTATATTTGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTACAGAAAACTAAAGAGCCTAGCGAATATGTTTCTCTTTGTGTACAACTGTAAATGCACACATCTATCCATGTAAAGTTTTACATCTCAGGAGGATAGGTACCAACCTGTTAAC-ATGCTGTATCTATAAGATACGAAATTTTACTTTCCTACAATTTcatacatacacacacact
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453293 226 - 192599291 ccttcatcctagcattatatatGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTGCAGAAAAACAAAGAGCCTACAGAATATGTTTCTCTTTGTGTACACCTGTAAATGTACACATCTATCCATGTAAAATTTTACATCTCAGAAGGATAGGCACCAACATGTTAACAATGCTATATCTACAAGATAAGAAATTTTACTTTCCTACAATTTCATACACA----------
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192291851 226 + 192460366 CCTTCATCCTAGCATTATATATGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTGCAGAAAAACAAAGAGCCTACAGAATATGTTTCTCTTTGTGTACACCTGTAAATGTACACATCTATCCATGTAAAATTTTACATCTCAGAAGGATAGGCACCAACATGTTAACAATGCTATATCTACAAGATAAGAAATTTTACTTTCCTACAATTTcatacaca----------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187262948 226 - 187378091 CCTTCATCCTAGCATTAGATATGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTGCAGAAAAACAAAGAGCCGACAGAATATGTTTCTCTTTGTGTACACCTGTAAATGTACACATCTATCCATGTACAATTTTACATCTCAGAAGGATAGGCACCAACATGTTAACAATGCTATATCTACAAGATAAGAAATTTTACTTTCCTAcaatttcatacaca----------
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156307 226 + 101219884 CCTTCATCCTAGCATTATATATGTAATCATCCATATAAACCAGATAGTGTTGAATGAAACTGCAGAAAAACAAAGAGCCTACAGAATATGTTTCTCTTTGTGTACACCTGTAAATGTACACATCTATCCATGCAAAATTTTACATCTCAGAAGGACAGGCACCAACATGTTAACAATGCCATATCTACAAGATAAGAAATTGTACTTTCCTACAATTTcatacaca----------
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579712 241 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122139829 241 - 199944510 I

a score=18259.000000
s hg38.chr14_KI270722v1_random        15785 10 +    194050 cacacacact
s panTro4.chr3                    125099045 10 - 202329955 cacacacact
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122140070 10 - 199944510 cacacacact
i gorGor3.chr3                    I 241 I 34
s nomLeu3.chr21                    44094051  4 +  86207423 ------ctct
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453519 10 - 192599291 CACACACTCT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292077 10 + 192460366 cacacactct
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263174 10 - 187378091 cacacactct
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156533 10 + 101219884 cacacactct
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579712 241 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I

a score=-5406.000000
s hg38.chr14_KI270722v1_random        15795 13 +    194050 ctcaaacacatac
s panPan1.JH650580                 19579953 12 -  19803153 -acacacacacac
i panPan1.JH650580                I 241 I 34
s nomLeu3.chr21                    44094055 10 +  86207423 ctcacacaca---
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453529  4 - 192599291 CTCT---------
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292087  5 + 192460366 ctctc--------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263184  5 - 187378091 ctctc--------
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156543  5 + 101219884 gtctc--------
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e panTro4.chr3                    125099055  0 - 202329955 C
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140080 34 - 199944510 I

a score=36796.000000
s hg38.chr14_KI270722v1_random        15808 31 +    194050 acacacacCGAGGatatatacgcacacaaat
s panTro4.chr3                    125099055 26 - 202329955 -cacacacaGAGGatatatatgcacac----
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44094065 22 +  86207423 ---------gaggatatatatacacacaaat
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453533 28 - 192599291 -CACACACAGAGGAAatatatgcacacaa--
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292092 29 + 192460366 acacacacagaggaaatatatgcacacaa--
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263189 29 - 187378091 acacacacagaggatatatatgcacacaa--
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156548 29 + 101219884 acacacacagaggatatatatgcacacaa--
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579965 34 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140080 34 - 199944510 I

a score=5096.000000
s hg38.chr14_KI270722v1_random        15839 2 +    194050 at
s panTro4.chr3                    125099081 2 - 202329955 at
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122140114 2 - 199944510 at
i gorGor3.chr3                    I 34 I 128
s nomLeu3.chr21                    44094087 2 +  86207423 at
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453561 2 - 192599291 at
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292121 2 + 192460366 at
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263218 2 - 187378091 at
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156577 2 + 101219884 at
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579965 34 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I

a score=9555.000000
s hg38.chr14_KI270722v1_random        15841 5 +    194050 atata
s panTro4.chr3                    125099083 5 - 202329955 atata
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44094089 5 +  86207423 atata
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453563 5 - 192599291 atata
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292123 5 + 192460366 atata
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263220 5 - 187378091 atata
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156579 5 + 101219884 atata
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19579965 34 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140116 128 - 199944510 I

a score=3661.000000
s hg38.chr14_KI270722v1_random        15846 2 +    194050 ta
s panTro4.chr3                    125099088 2 - 202329955 ta
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19579999 2 -  19803153 ta
i panPan1.JH650580                I 34 I 124
s nomLeu3.chr21                    44094094 2 +  86207423 ga
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453568 2 - 192599291 ta
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292128 2 + 192460366 ta
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263225 2 - 187378091 ta
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156584 2 + 101219884 ta
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140116 128 - 199944510 I

a score=204129.000000
s hg38.chr14_KI270722v1_random        15848 121 +    194050 aacatacatgtttatataggtacacacaca----------catacatataCACTgatggt---caacttataatggttcaatttatgattttttttttactttatgatgaagcaaaagtgatagctttgaatag
s panTro4.chr3                    125099090 122 - 202329955 aacatacgtatttatatagatacacatgca----------tatacatatacacagatggtcaccaacttataatggttcaatttatga--tttttttaacattatgttgaagcaaaagtgatagctttgaatag
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44094096 119 +  86207423 aacataca----tatatagatacacacaca----------catacatatacacagatggtcaccaacttataatggttcaatttatga-tgttttttaactttatgatgaagcaaaagtgatagctttgaatag
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453570 131 - 192599291 aacatacatatttatatagatacacacacatatacacacacatacatataCAcagatggtcaccaacttataatggttcaatttatga---tttttttactttatgatgaagcaaaagtgatagctttcaatag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292130 131 + 192460366 aacatacatatttatatagatacacacacatatacacacacatacatatacacagatggtcaccaacttataatggttcaatttatga---tttttttactttatgatgaagcaaaagtgatagctttcaatag
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263227 131 - 187378091 aacatacatatttatatagatacacacacatatacacacacatacatatacacagatgGTCACCAACTTATAATGGttcaatttatga---tttttttactttatgatgAAGCAAAAGTGATAGCTTTCAATAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156586 131 + 101219884 aacatacatatttatatagatacacacacatatacacacccatacatatacacagatggtcaccaacttataatggttcaatttatga---tttttttactttatgatgaagcaaaagtgatagctttcaatag
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19580001 124 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140116 128 - 199944510 I

a score=5096.000000
s hg38.chr14_KI270722v1_random        15969 2 +    194050 aa
s panTro4.chr3                    125099212 2 - 202329955 aa
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122140244 2 - 199944510 aa
i gorGor3.chr3                    I 128 C 0
s nomLeu3.chr21                    44094215 2 +  86207423 aa
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453701 2 - 192599291 aa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292261 2 + 192460366 aa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263358 2 - 187378091 AA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156717 2 + 101219884 aa
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19580001 124 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I

a score=9828.000000
s hg38.chr14_KI270722v1_random        15971 3 +    194050 tat
s panTro4.chr3                    125099214 3 - 202329955 tat
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19580125 3 -  19803153 TAT
i panPan1.JH650580                I 124 C 0
s gorGor3.chr3                    122140246 3 - 199944510 tat
i gorGor3.chr3                    C 0 I 19675
s nomLeu3.chr21                    44094217 3 +  86207423 tat
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453703 3 - 192599291 tat
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292263 3 + 192460366 tat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263360 3 - 187378091 TAT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156719 3 + 101219884 tat
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I

a score=5096.000000
s hg38.chr14_KI270722v1_random        15974 2 +    194050 aa
s panTro4.chr3                    125099217 2 - 202329955 aa
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19580128 2 -  19803153 AA
i panPan1.JH650580                C 0 I 22908
s nomLeu3.chr21                    44094220 2 +  86207423 aa
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453706 2 - 192599291 aa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292266 2 + 192460366 aa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263363 2 - 187378091 AA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156722 2 + 101219884 aa
i chlSab2.chr22                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=584846.000000
s hg38.chr14_KI270722v1_random        15976 343 +    194050 ccattctgcttttcactttcagtacaatattcaacaaattacataaaatatccaatactttattataaagtgggttttgtattcaatgattttgcccaattgtcagctgatgtaagtgttctgagcacattaaaggtatgccaggctaagctgtgatattcagtaagtgagg--tattaaatacatttttaacttactgtattttcaatttataatcagcttttcaagacttaaccccattgtacattgaaaagcatttgTATTGCATTAAACATGTTATAAAATATTTTTAATTGAAATTACTGGCAACTTTTGAAAAAATGTAATTAAATAATGTGCTTTGCT
s panTro4.chr3                    125099219 345 - 202329955 ctattctgcttttcactttcagtacaatattcaacaaattacataaaatatccaatactttattataaaatgggttttgtattcaatgattttgcccagctgtcagctgatgtaagtgttctgagcatattaaaggtatgccaggctaagctgtgatgtgcagtatgttaggcatattaaatacatttttaacttacagtattttcaatttatgatcagcttatcaagacttaaccccattgtacattgaaaagcatttgTATTGCATTAAGCATGTTATATAATATTTTTAATTGAAATTACTGGCAACTTTTGAAAAAATGAAATGAAATAATGTGCTTTGCT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44094222 323 +  86207423 ctattctgcttttcactttcagtacaatattc--------------aatatctaatactttattataaagtgggttttgtattcaatgattttgcccaactgtcagctgatgtaagtgttctgagcacattaaaggtatgccaggctaagtcgtgatgttcagtatgttaggcacgttaaataca-ttttaacttacagtattttcaatttatgatcatcttatcaagac--aaccccattctacattgaaaagcatttgTATTGCATTAAGCATGTTATATAATATTTTGTATTGAAATTACTGGCAACTTTTGAAAAAATG-----AAGTAATATGCTTTGCT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192453708 339 - 192599291 ctattctgcttttcactttcagtataatattcaacaaattacataaaatatacaatactttattataaaatgggttttgtattcaatgattttgcccaactgtcagctgatgtaagtattctgagcacattaaaggtatgccaggcta-----tgatattcagtatgtcaggtatattaaatacatttttaacttacagtatttt-aatttatgatcagtttatcaagacttaaccccattgtacattgaaaagcatttgTATCGCATTAAGCATGTTATATAATATTTTTAATTGAAATTACTGGCAACTTTTGAAAAAATGAAATGAAATAATGTGTTTTGCT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292268 339 + 192460366 ctattctgcttttcattttcagtataatattcaacaaattacataaaatatacaatactttattataaaatgggttttgtattcaatgattttgcccaactgtcagctgatgtaagtattctgagcacattaaaggtatgccaggcta-----tgatattcagtatgtcaggtatattaaatacatttttaacttacagtatttt-aatttatgatcagtttatcaagacttaaccccattgtacattgaaaagcatttgTATCGCATTAAGCATGTTATATAATATTTTTAATTGAAATTACTGGCAACTTTTGAAAAAATGAAATGAAATAATGTGTTTTGCT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263365 344 - 187378091 CTATTCtgcttttcactttcagtataatATTCaacaaattacataaaatataccatactttattataaaatgggtTTTGTATTcaatgattttgcccaactgtcaGCTGATGTAAGTATTCTGAGCACATTAAAGGTATGCCAGGCTAAGCTGTGATATTCAGTATGTCAggtatattaaatacatttttaacttatagtatttt-aatttatgaTCAGTTTATCAAGACTTAACCCCGTTGTACATTGAAAAGCATTTGTATCGCATTAAGcatgttatataatatttttaattgaaattactggcaacttttgaaaaaatgaaatgaaataatgtgttttgCT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101156724 345 + 101219884 ctattctgcttttcactttcagtataatattcaacaaattacataaaatatacactactttattataaaatgggttttgtattcaatgattttgcccaactgtcagctgatgtaagtattctgagcacattaaaggtatgccaggctaagccgtgatattcagtatgtcaggtatattaaatacatttttaacttacagtattttcaatttatgatcagtttatcaagacttaaccccattgtacattgaaaagcatttgTATCACATTAAGCATGTTATATAATATTTTTAATTGAAATTACTGGTAACTTTTGAAAAAATGAAATGAAATAATGTGTTTTGCT
i chlSab2.chr22                   C 0 I 160
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=234088.000000
s hg38.chr14_KI270722v1_random        16319 138 +    194050 ATTGGTTGAAATGTTTTTggacagggtcagtggcttacatctgtaatcccagcactttggtaggctgaggt----gggcagatcacttgaggtcaggagtttgagaccagcctggcaaacagggtgaaaccccatctctact
s panTro4.chr3                    125099564 138 - 202329955 ATTGGTTAAAATGTTTTTggccagggtcagtggctcacgcctgtaatcccagcactttgggaggccaaggc----gggtgcatcacttgaggtcaggagtttgagaccagcctggcaaacatggtgaaaccccatctctact
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44094545 136 +  86207423 ATTGGTTAAAATGCTTTTggccgggg-cagtggctcacgcctgtaat-ccagcactttgggatgccaaggc----gggtgcatcacttgaggtcaagagtttgagaccagcctggcaaacatggtgaaactccatctctact
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192454047 138 - 192599291 ATTGGTTAAAATGCTTTTggccaggggcagtggctcatgcctgtaatcccagaactttgggaggccaagga----ggctgcatcagttgaggtcaggagtttgagaccagcctggaaaacatggtgaaacctcatctctact
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292607 138 + 192460366 ATTGGTTAAAATGCTTTTggccaggggcagtggctcatgcctgtaatcccagaactttgggaggccaaggc----ggctgcatcagttgaggtcaggagtttgagaccagcctggaaaacatggtgaaacctcatctctact
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263709 138 - 187378091 ATTGGTTAAAATGTttttggccaggggcagtggctcatgcctgtaatcccagaactttgggaggccaaggc----gggtgcatcagttgaggtcaggagtttgagaccagcctggaaaacatggtgaaacctcatctctact
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101157229 142 + 101219884 ATTGGTTAAAATGTTTTTggccaggggcagtggctcatgcctgtaatcccagaactttgggaggctaaggcgggtgggtgcatcagttgaggtcaggagtttgagaccagcctggaaaacatggtgaaacctcatctctact
i chlSab2.chr22                   I 160 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159732849 6617 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=358769.000000
s hg38.chr14_KI270722v1_random        16457 165 +    194050 aaaaatacaaaaattatctgagtgtggtggcatgtgcctgtaatcccagctactagggaggctgaggtgtgagaattccttgaactaggcaagcagaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacagagtaagattctgtca----aaaa
s panTro4.chr3                    125099702 164 - 202329955 aaaaatacaaaaattatccgagtgtggtggcatgtgcctgtaatccca-ctacttgggaggctgaggtgggagaattgcttgaaccagacaagcagaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacagagtaagactctgtca----aaaa
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159739466 164 - 202140232 aaaaatacaaaaattatccgagtgtggtggtg-gtgcctgtaattccagctacttgggaggctgaggtgggagaattgcttgaaccaagcaagcagaggttgcagtgaaccaaaatcatgccattgcactccagcctgggcaacagagtaagactctgtca----aaaa
i ponAbe2.chr3                    I 6617 C 0
s nomLeu3.chr21                    44094681 165 +  86207423 aaaaatacaaaaattatcgaagtgtggtggctcgcacctgtaatcccaactacttgggaggctgaggtgggagaattgcttgaatcaggcaagcagaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacagagtaagattctgtca----aaaa
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192454185 159 - 192599291 aaaaatacaaaaattacctgagtgtggtggcgtgtgcctgcagtcccagctacttgggaggctgaggtgggaggattgcttgaaccaggcgagcagagattgcagtgagccgagatcatgccatttcacttcagcct--gcaacagagtaagactctgtca--------
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292745 159 + 192460366 aaaaatacaaaaattacctgagtgtggtggcgtgtgcctgtagtcccagctacttgggaggctgaggtgggaggattgcttgaaccaggcaagcagagattgcagtgagccgagatcatgccatttcacttcagcct--gcaacagagtaagactctgtca--------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187263847 159 - 187378091 aaaaatacaaaaattacctgagtgtggtggcatgtgcctgtagtcccagctacttgggaggctgaggtgggaggattgcttgaatcaggcaagcagagattgcagtgagccgagatcatgccatttcacttcAGCct--gcaacagagtaagactctgtca--------
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101157371 163 + 101219884 aaaaatacaaaaattacctgagtgtggtggcgtgtgcctgtagtcccagctacttgggaggctgaggtgggaggattgcttgaaccaggcaagcagagattgcagtgagccgagatcatgacatttcacttcagcct--gcaacagagtaagactctgtcaaaaa----
i chlSab2.chr22                   C 0 I 148
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=5195.000000
s hg38.chr14_KI270722v1_random        16622 16 +    194050 aaaa---------------------aaagaaagaaag
s panTro4.chr3                    125099866 37 - 202329955 aaaaaaaaaaaagaaagaaagaaagaaagaaagaaag
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159739630 34 - 202140232 aagaaaaaaaaaagaaaaaaga---aaagaaagaaag
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44094846 17 +  86207423 aaaaa--------------------aaagaaagaaag
i nomLeu3.chr21                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101157534 148 + 101219884 I
e papAnu2.chr2                    187264006  0 - 187378091 C
e macFas5.chr2                    192292904  0 + 192460366 C
e rheMac3.chr2                    192454344  0 - 192599291 C

a score=1229833.000000
s hg38.chr14_KI270722v1_random        16638 541 +    194050  
s panTro4.chr3                    125099903 539 - 202329955  
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159739664 538 - 202140232  
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44094863 516 +  86207423  
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192454344 539 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192292904 539 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187264006 540 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101157682 540 + 101219884  
i chlSab2.chr22                   I 148 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e canFam3.chr31                    11103131 548 +  39895921 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=2610801.000000
s hg38.chr14_KI270722v1_random        17179 1019 +    194050  
s panTro4.chr3                    125100442 1019 - 202329955  
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159740202 1020 - 202140232  
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44095379 1006 +  86207423  
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192454883 1009 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192293443 1012 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187264546 1014 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101158222 1016 + 101219884  
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11103679 1040 +  39895921  
i canFam3.chr31                   I 548 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e mm10.chr16                       75503525 1167 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=655624.000000
s hg38.chr14_KI270722v1_random        18198 260 +    194050 GTAATCAAATTAGTGAAGT-ATGGTAAGTCTTT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATTTAT--------CTCTATAGTATTGT---------GGGTCTTCTGTGTTTCC---TAAGGGCACATTCA-TATGATCTAATAACTGA--------GCAGAGAGAAGCCTATAGGATAGTTTATGGTTTCATTTGTTTGTTTTTGCCAATTAACATACATTTCT----AGATTAAAAGTCAGCTATCTTTTCCTTGGGAGTCAACTATAGGAGA-------------AGATAGTGAAGAGG
s panTro4.chr3                    125101461 259 - 202329955 GCAATCAAATTGCTGAAGT-AT-GTAAGTCTTT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATTTGT--------CTCTATAATAGTGT---------GGGCCTTCTGTGTTTCC---TAAGGGCACATTCA-TATGATCTAATAACTGA--------GCAGAGAGAAGCCTAAAGGACAGTTTATGGTTTCATTTGTTTGTTTTTGCTAATTAACATACATTTCT----AGATTAAAAGTCAACTATCCTTTCCTCAGGAGTTGACTATAGGAGA-------------AGATAGCAAAGAGG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159741222 260 - 202140232 GCAATCAAATTGCTGAAGT-ATGGTAAGTcttt----tgaagagcattaaacagcagagaatgtaagaaatttgt--------gtctataatagtgt---------gggccttctgtgtttcc---taaggacacattca-tatgatctaataactgg--------gcagaaagaagcCTAAAGGATAGTTTATGGTTTCATTTGTTTGTTTTTGCCAGTTAACATACATTTCT----AGATTAAAAGTCAACTATCTTTTCCTTGGGAGTCGACTATAGGAGA-------------AGATAGCGAAGAGG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44096385 251 +  86207423 GCAATCAAATTGGTGAAGT-AT---------TT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATTTGT--------CTCTATAATAGTGT---------GGGCCTTCTGTGTTTCC---TAAGGGCACATTCA-TATGATCAAATAACTGA--------GCAGAGAGAAGCCTAAAGGATAGTTTATGGCTTCATTTGTTTGTTTTTGCCAATTAACATACATTTCT----GGATTAAAAGTCAACTATCTTTTTCTTGGGAGTCGACTATAGGAGA-------------AGATTGTAAAGAGG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192455892 259 - 192599291 GTAATCAAACCAGTGAAGT-ATCGTAAGTCTTT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATCTGT---------TCTATAATAGTGT---------GGGACTTCCGTGTTTCC---TAAGGGCACATTCG-TATGATCTAATAACTAA--------GCATAGAGAAGCCTAAAGGATAGTTTATGGTTTCATTTGCTTGTTTTTGCCAATTAACATACATTTCT----AGATTAAATGTCAACTATATTTTCCTCAGGGGTCAGCTATAGGAGA-------------AGCTAGTGAAGAGG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192294455 259 + 192460366 GTAATCAAACCAGTGAAGT-ATCGTAAGTCTTT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATCTGT---------TCTATAATAGTGT---------GGGACTTCCGTGTTTCC---TAAGGGCACATTCG-TATGATCTAATAACTGA--------GCATAGAGAAGCCTAAAGGATAGTTTATGGTTTCATTTGTTTGTTTTTGCCAATTAACATACATTTCT----AGATTAAATGTCAACTATATTTTCCTCAGGGGTCAGCTATAGGAGA-------------AGCTAGTGAAGAGG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187265560 259 - 187378091 GTAATCAAACCAGTGAAGT-ATCGTAAGTCTTT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATCTGT---------CCTATAATAGTGT---------GGGACTTCTGTGTTTCC---TAAGGGCACATTCA-TATGATCTCATAACTGA--------GCAGAGAGAAGCCTAAAGGATAGTTTatggtttcatttgtttgtttttgccaattAACATACATTTCT----AGATTAAAAGTCAACTATATTTTCCTCAGGGGTCAGCTATAGGAGA-------------AGCTagtgaagaga
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101159238 259 + 101219884 GTAATCAAACCAGTGAAGT-ATCATAAGTCTTT----TGAAGAGCATTAAACAGCAGAGAATGTAAGAAATTTGT---------TCTATAATAGTGT---------GGGACTTCTGTGTTTCC---TAAGGGCACACTCG-TATGATCTAATAACTGA--------GCAGAGAGAAGCCTAAAGGATAGTTTATGGTTTCATTTGTTTATTTTTGCCAATTAACATACATTTCT----AGATTAAAAGTCAACTATATTTTCCTCAGAGGTCAGCGATAGGGGA-------------AGCTAGTGAAGAGG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75504692 267 +  98207768 gCAGTCTAAGTAGTAAAAA-TCAGAAAACCATTCCACTATAGAATGATAAATAAGAAAGAATACCAG-ATTTTGTAAAGATTTCCCTCCAACATTGTCC----CAGCATCCTTCTATATTTCCTCTTAAGGGCATCTTTGTTATGACCTAGTAACCAA--------GGAGACAGCAGCCTCAAGGGTCATTTATA----TATTTGTTTGGTTTTGC----TAACAATTAAATCT----GGAATTAAGGCCAGATTTTTTTCTCTC-----TCTGAGGAAAGAGA-------------GATTGTGGAAGAAG
i mm10.chr16                      I 1167 C 0
s canFam3.chr31                    11104719 286 +  39895921 GCAGTCAAATTACTGAGATGATAACAGATCTTC----TGAAGGACATTAAACAAAGGAGAAAGGAAGAAAGTCAT--------CTCTTTAATAGTGTCTGCAGTATGGGCTTTCTGTGCTCCTTGTTAGAGGCACA-TCG-TATGATCTAATAATTAATTAACTACGCATATGGCAGTCTAAAGG-TAGTGTATGGTTTTATT---TTATTTTAGT--ATTTATGTATttttttttgaagatt-----ttatttatttattcatgagagatacacagtgagagacagagacacaggcagagggagaagcag
i canFam3.chr31                   C 0 I 210
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=225222.000000
s hg38.chr14_KI270722v1_random        18458  94 +    194050 -CAAGGAAAATTACAGCAGCTCAACAG---CTTTACCCTGGAAATATCT--------------------GTATTGTGTACCGCTATAGCCTA----------CCtt----tatcagtcagataacaatgtca
s panTro4.chr3                    125101720  94 - 202329955 -CAAGGAAAATTACAGCAGCTCAACAG---CTTTACCCTGGAAATATCT--------------------GTATTGTGTCCCGCTATAGCCTA----------CCtt----tatcagtcagataacaatgtca
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159741482  94 - 202140232 -CAAGGAAAATTACAGCAGCTCAACAG---CTTTACCCTGGAAAGAGCT--------------------GTATTGTATACCGCTATAGCCTA----------CCTT----TATCAGTCAGATAACAATGTCA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44096636  93 +  86207423 -CAAGGAAAGTTATAGCAGCTCGACAG---CGTTACCCTGGAAATATCC--------------------GTATTGTGCGCCGCTATGGccta-----------ctt----tatcagtcagataacaatgtcc
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192456151  94 - 192599291 -AAAGGAAAATTATAGCAGCTCAATAG---CTTTACCCTGGAAATATCC--------------------GTATCGTGTACTGCTGTGGCCTA----------CCtt----tatcagtccgataacaatgtca
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192294714  94 + 192460366 -AAAGGAAAATTATAGCAGCTCAATAG---CTTTACCCTGGAAATATCC--------------------GTATCGTGTACTGCTGTGGCCTA----------CCtt----tatcagtccgataacaatgtca
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187265819  94 - 187378091 -aaaggaaaattatagcaGCTCAATAG---ATTTACCCTGGAAATATCC--------------------GTATTGTGTACTGCCGTGGCCTA----------CCTT----TATCAGTCCGATAACAATGTCA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101159497  94 + 101219884 -AAAGGAAAATTATAGCAGCTCAACAG---CTTTACCCTGGAAATATCC--------------------GTATTGTGTACTGCCGTGGCCTA----------CCTT----TTTcagtccaataacaatgtca
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75504959 124 +  98207768 -CCAGGAAATCTGTAGCTCTCCAATAA---CATTTACCTGAAATTCCCCAATAATATTTACGTGAAAATGTCTCTCAGGCTGCATTTCTCTAATCCTGCATTTCTC----TAATGAGCAGATGTCAGTGTCA
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    28790630 100 -  39895921 CAAAGGGCAATGGTAGC--TCCAATAGTAACTCTACTCTGGAAATATCC--------------------AGATTGTCTATGTCTAAAGCCTA----------CTTTTTTCTATCAGTCAGGTCTGAATCACT
i canFam3.chr31                   n 210 n 210
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=998678.000000
s hg38.chr14_KI270722v1_random        18552 359 +    194050 aagaggc-aagctt----------------------------------------------ggcaccgttgctcttagtgaatctctgctgccagccttttatcctaagtgctctccaaagac---------ccatttaa--tggaccttcctgaaattgtgttcaggatcaatatga----------------ggctcattgatacagcatt----------------------tttg-gaactcaccatttgcttatttattaaacctgggatagttgcccgactta-------tatcatctgaaatcctctccatg----a--ctttcaaaattatcaacattggttccaacattattcctagaaaacatttcagtggagtatatttatctgacatttgactgtatttatagcagtaagAATCT-ATGATGATTCCTCCCAAAATAATCCCACAATTACCCATTTTGG
s panTro4.chr3                    125101814 359 - 202329955 aagaggc-aagctc----------------------------------------------ggcaccattgctcttagtgaatccctgctgccagccttttatcctaagtgctctcaaaagac---------ccatttaa--tggaccttcctgaaattgtgctcaggatcaatataa----------------gattcattgatacagcaat----------------------tttg-gaactcaccatctgcttatttattaaacctgggatagttgcccaacttc-------tatcatctgaaatcgtctccatg----a--ctttcaaaattaccaacattggttccaacatcattcctagaaaacatttcagtggagtatatttatctgacatttgactgtatttatagcagtaagagtct-atgatgattcctcCCAAAAGAATCCCACAATTACCCATTTTGG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159741576 359 - 202140232 AAGAGGC-Aagctt----------------------------------------------ggcaccaatgctcttagtgaatccctgctgccagccttttatcctaagtgctctcaaaagac---------ccatttaa--tggaccttcctgaaattgtgctcaggatcaatataa----------------ggctcattgatacagcatt----------------------tttg-gaactcaccatttgcttatttattaaaCCTGGGATAGTTGCCAGACTTC-------TATCATCTGAAATCCTCTCCATG----A--CTTTCAAAATTACCAACATTGGTTCCAACATCATTCCTAGAAAACATTTCAGTGGAGTATATTTATCTGACATTTGACTGTGTTTATAACAGTAAGAATCT-ATGATGATTCCTCCCAAAATAATCTCACAATTACCCATTTTGG
i ponAbe2.chr3                    C 0 I 938
s nomLeu3.chr21                    44096729 358 +  86207423 aagaggc-aagctt----------------------------------------------ggcaccattgctcttagtgaatctctgctgccagccttctatcctaa-tgctctcaaaagac---------ccatttaa--tggaccttcctgaaactgtgctctggatcaatatga----------------ggctcattgatacggcatt----------------------tttg-gaattcaccgtttgcttatttattaaacctgggatagttgcctgacttc-------aatcatctgaaatcctctccatg----a--ctttcaaaattaccaacattggttccaacatcattcctagaggacatttcagtggagtatattcatctgACATTTGACTGTATTTATAACAGTAAGAATCT-ATGATGATTCCTCCCAAAATAATCCCACAATGACCCAATTTGG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192456245 360 - 192599291 aagaggcaaacctt----------------------------------------------ggcactattgctcttagtgaatccctgctgccagccttttatcctaagtgctctccaaagac---------ccacttaa--tggaccttcctgaaatcgtgctcaggatcaatacaa----------------ggctcattgatacagcatt----------------------tttg-gaattcaccatttgcttatttattaaacctgggatagttgcccgacttc-------taacatctgaaatcctctccatg----a--ctttcaaaattaccaacattggttccaacatcattcctagaaaacatttcagtggagtatatttatctgacatttgactttatttacagcagtaagAATCT-ATGATGATTCCTCCCAAAATAATCCCACAATTACCCATTTTGG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192294808 360 + 192460366 aagaggcaaacctt----------------------------------------------ggcactattgctcttagtgaatccctgctgccagccttttatcctaagtgctctccaaagac---------ccacttaa--tggaccttcctgaaatcgagctcaggatcaatacaa----------------ggctcattgatacagcatt----------------------tttg-gaattcaccatttgcttatttattaaacctgggatagttgcccgacttc-------taacatctgaaatcctctccatg----a--ctttcaaaattaccaacattggttccaacatcattcctagaaaacatttcagtggagtatatttatctgacatttgactttatttacagcagtaagAATCT-ATGATGATTCCTCCCAAAATAATCCCACAATTACCCATTTTGG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187265913 359 - 187378091 AAGAggc-aacctt----------------------------------------------ggcactattgctCTTAGTGAATCCCTGCTGCCAGCCTTTTATCCTAAGTGCTCTCAAAAGAC---------CCACTTAA--TGGACCTTCCTGAAATCGTGCTCAGGATCAATACAA----------------GGCTCATTGATACAGCATT----------------------TTTG-GAATTCaccatttgcttatttattaaatCTGGGATAGTTGCCCGACTTC-------TAACATCTGAAATCCTCTCCATG----A--CTTTCAAAATTACCAACATTGGTTCCACCATCATTCCTAGAAAACATTTCAGTGGAGTATATTTATCTGACATTTGACCTTATTTACAGCAGTAAGAATCT-ATGATGATTCCTCCCAAAATAATCCCACAATTACCCATTTTGG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101159591 359 + 101219884 aagaggc-gacctt----------------------------------------------ggcactattgctcttagtgaatccctgctgccagccttttatcctaagtgctctcaaaagac---------ccacttaa--tggaccttcctgaaatcgtgctcaggatcaatacaa----------------ggctcattgatacagcatt----------------------tttg-gaattcaccatttgcttatttattaaacctgggatagttgcccgacttc-------taacatctgaaatcctctccatg----a--ctttcaaaattaccaacattggttccaacatcattcctagaaaacatttcagtggagtatatttatctgacatttgaccttatttacagcagtaagAATCT-ATGATGATTCCTCCCAAAATAATCCCACAATTACCCATTTTGG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75505083 362 +  98207768 ATGAGGT-AAGGTT----------------------------------------------GGCATAGCCTC------TGCGTATCTGCTTcca-tttcttatgctaagtgctcttgagaca----------ccatttaa--taggccttcctaacgttatgttcaggatgaatataa----------------aactcactgtcagtgcatt----------------------ttggaggatatgccatttgctgctgaattaaacctgggatggtcaaccagcttcaggattttgccattcctagctctctctgtgtgtca--ttctcaaaatcacaagcatt-cttcctgcgacattcctagaagactttccactggactacattaatttgtcacatgcacttatttgtacacttaagagcta-ccactatttccCTCCACACTTAAATTGAAATTATATATCTGAA
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11105215 453 +  39895921 AAAAAGT-AGGCTTTAGACATAGACAATCTGGATATTTCCAGAGTAGAGTTACTATTGGAGCTACCATTGCCCTTTG----CCTCTGCCTACAGCTTCTCCCAGGGAGGATTCCTGAGGAAAGGATGGTTGCCTTGTGATCTAGACATTTATG-----TTGGTTGGGAAATACATAAATAGGGATGCCTGAGTGGCTCAGTGGTTGAGCCTTTAGCTGATAACTTCAATTGACATTTG-gaattcaccatttgcttcttttttcaagctcgaatagttacctttcttctgggttctaacatctcaacccctctccatg----gctctctcaaaatcaccaacattgttttcactatcatttctagaagactttttgatccagtatatttatctgagacctgaact--tttatagcaataagaatctaatgctatctccctgcAACTAAAACTCACAATTACACATTTTAG
i canFam3.chr31                   I 210 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=482274.000000
s hg38.chr14_KI270722v1_random        18911 212 +    194050 GTCACCTTTGAGGGTTTTACCCTTAATATCAGAGATC----TGTTC---TATACATTTGAGTCTTAGAAATAAT---T--ACTAGCTTCTCTCTGAATTTAACTGAAGTTCCTTACTT---TTATTCAGCCTGTTACCCAAATTACATAATGTATTGAAGGCTAAAAACTGTCCAAATTTCTGATTACATTTAGATAAAAATG-GGAATATGACTTTTTCTTTTTCTA
s panTro4.chr3                    125102173 212 - 202329955 GTCACCTTTGAGGGTCTTATCCTTATTATCAGAGATC----CGTTC---TATACATTTGAGTCTTAGAAACAAT---T--ACTAGTTTCTCTCTGAATTTAACTGAAGTTCCTTACTT---TTATTCAGCCTATTACCCAAATTACATAATGTATTGAAGGCTAAAAACTGTCCAAATTTCTGACTACATTTAGTTAAAAATG-GGAATATGACTTTTTCTTTTTCTA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44097087 202 +  86207423 GTCACCTTTGAGGGTCTTATCCTTAATATCAGAGATC----TGTTC---TATACATTTGAGTCTTAGAAACAAT---T--ACTAGCTTCTCTCTGAATTTAACTGAAGTTCCTTACTT---TTATTC-GCCTATTA---GGATTACATAATGTATTGAAGGCTAAAAACTGTCCAAATTTCTGACTACATTTAGTTAAAAATG-GGAATATGA------CTTTTTCTA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192456605 210 - 192599291 GTCACCTTTGAGGGTCTTATCCTTAATATCAGAAATC----TGTTC---TATACATTTGAGTCTTAGAAACAAT---T--ACTAGCTTCTCTCTGAATTTAACTGAAGTTCCTTACTT---TTATTCAGTCTATTACCCAAATTACATAATGTATTGAAGGCTAAAAACTGTCCAAATTTCTGACTACATTTAGCTAAAAATG-GGAATATGACTTT--CTTTTTCTA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192295168 210 + 192460366 GTCACCTTTGAGGGTCTTATCCTTAATATCAGAAATC----TGTTC---TATACATTTGAGTCTTAGAAACAAT---T--ACTAGCTTCTCTCTGAATTTAACTGAAGTTCCTTACTT---TTATTCAGTCTATTACCCAAATTACATAATGTATTGAAGGCTAAAAACTGTCCAAATTTCTGACTACATTTAGCTAAAAATG-GGAATATGACTTT--CTTTTTCTA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187266272 209 - 187378091 GTCACC-TTGAGGGTCTTATCCTTAATATCAGAAATC----TGTTC---TATACATTTGAATCTTAGAAACAAT---T--ACTAGCTTCTCTCTGAATTTAACTGAAGTTCCTTACTT---TTATTCAGTCTATTACCCAAATTACATAATGTATTGAAGGCTAAAAACTGTCCAAATTTCTGACTACATTTAGCTAAAAATG-GGaatatgacttt--ctttttcta
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101159950 210 + 101219884 GTCACCTTTGAGGGTCTTATGCTTAATATCAGAGATA----TATTC---TATACATTTGAGTCTTAGAAACAAT---T--ACTAGCTTCTCTCTGAATTTAACTGAAGTTTCTTACTT---TTATTCAGTCTATTACCCAAATTACATAATGTATTAAAGTCTAAAAACTGTCCAAATTTCTGACTACATTTAGCTAAAAATG-GGAATATGACTTT--CTTTTTCTA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75505445 221 +  98207768 GTCAACTTTGAGGGTTTTATTCTTAAGACTTGAGAGCTAATTGTCC---TACATAGTTTATCCTTAAAACCAACTTAT--ATTAAATTCTGTCTAAACTTAGATGAATTTTTTTTTTTTACTTTTTATACTTATTCAACAGATTTCATAATATGTGTCAGGCTACAATCTGTCAAAATTTCCCACTGT-CTTAGCTTGAAATGTAGAATATGGCTTCT-CTTTTTCTT
i mm10.chr16                      C 0 I 1915
s canFam3.chr31                    11105668 211 +  39895921 ATCACTTTTAAGGTCCTTATCCTTAATACTAGAGATC----TCTTCTTTTATAAATTTTATTCCTAAAATTATT---TCCACTTGCTTCTCTATGAAGTTAGCTGAAATTTTTTACTT---GTATTCTAT-GATTTCTAGAATTACATAATATATTGAAGGCT-----CCCTCCAATTTTCTGATTAGATTAAGTTGGAAATG-GGAATATGTTTTTTTCTTTTCCTA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159741935 938 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=689342.000000
s hg38.chr14_KI270722v1_random        19123 355 +    194050 ACTTGGCAAAGATTATGTTTTTTTTCATGAAGAAATATAGGCATATTTAAACACTCAGGATCTGAGAATTTGAAATACATGAAACTT--AGCAAGTGG----TCTTTAAGTAGTTTTCATTTCTAAATTATAGTA----CATTCCATTGAATGCTACAGAAGGAAAGACAATGAGGGATTACTC-ATAAACATTGCCTTTATGATATCCTTCCAAAGAAAACCAAGTGTCCCTGTGCTTGGACTCATAAAGCAGAAATACTCACCTTGCTTTTATGTCACTAACAAACA--ATTGTGCCTAGTCAATTAATTCTAACTCATATAAGCCATCTTGAGAGTGGAGCCCCTAGGGAAAACTACAAATGGAA
s panTro4.chr3                    125102385 354 - 202329955 ACTTGGCAAAGATTAT-TTTTTTTTCATGAAGAAATATAGGCATATTTAAACACTCAGGATCTGAGAATTTGAAATACATGAAACTT--AGCAAGTGG----TCTTTAAGTAGTTTTTGTTTCTAAATTATAGTA----CATACCATTGAATTCTACAGAAGAAAAGACAATGGGAGATTACTC-ATAAACATTGCCTTTATGATATCCTTCCAAAGAAAACCAAGTGTCCCTGTGCTTGGACTCATAGAGCAGGAATGTTTACCTTGCTTTGATGTCACTAACAAACA--CTTGTGCCTAGTCATTGAATTCTAATGCATTTAAGCCATCTTGAGAGTAGAGCCCCTAGAGAAAACTACAAATGGAA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44097289 349 +  86207423 ACTTGGCAAAGATTAT-GTTTTTCTCATGAAGAAATATAGGCATATTTAAACACTCAGGATCTGAGAGTTTGAAATACATGAAACTT--AGCAAGTGG----TCTTTAAGTAGTTTTCGTTTCTAAATTATAGTA----CATACCATTGAATGCTACAGAAGAAAAGACAAT----GATTACTC-ATAAACATTGCCTTTATGATATCCTTCCAAAGAAAACCAAGTGTCCCTGTGCTTGGACTCACAAAGCAGGAATGTTTACCTTGCTTTGATGTCCCTAACAAACA--CTTGTGCCTAGTCATTGAATTCTAATGCATTTAAGCCATCTTGAGGGTAGAGCCCC-AGAGAAAAGTACAAATGGAA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192456815 346 - 192599291 ACTTGGCAAAGCTTAT--GGTTTTTCATGAAGAAATATAGGCATATTTAAACACTCAGGGTCTGAGAATCCAAAATATATGAAACTT--AACAAGCGG----TCTCTAAGTAGTTTTCGTTTCTAAATTATAGTA----CATACCATTGAATGCTACAGAAGAAAAGACAATGAGGGATTACTC-ATAAACATTGCCTTTAAGATATCCTTCCATAGGAAACC-AGTGTCCCTGTGCTTGGACTCACAGAGCAGGAATGTTTACCTTGCTTTGATATCACCAACAAACA--CTTGTGACTAGTCATTGAATTCTAA------TAAGCCATCTTGAGAGTAGAGCCCCTAGGGAAAACTACAAATGGAA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192295378 352 + 192460366 ACTTGGCAAAGCTTAT--GGTTTTTCATGAAGAAATATAGGCATATTTAAACACTCAGGGTCTGAGAATCCAAAATATATGAAACTT--AACAAGCGG----TCTCTAAGTAGTTTTCGTTTCTAAATTATAGTA----CATACCATTGAATGCTACAGAAGAAAAGACAATGAGGGATTACTC-ATAAACATTGCCTTTAAGATATCCTTCCATAGGAAACC-AGTGTCCCTGTGCTTGGACTCACAGAGCAGGAATGTTTACCTTGCTTTGATATCACCAACAAACA--CTTGTGACTAGTCATTGAATTCTAATGTATTTAAGCCATCTTGAGAGTAGAGCCCCTAGGGAAAACTACAAATGGAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187266481 352 - 187378091 acttgGCAAAGCTTAT--GGTTTTTCATGAAGAAATATAGGCATATTTAAACACTCAGGGTCTGAGaatccaaaatatatgaaactt--aACAAATGG----TCTCTAAGtagtttttgtttctaaattataGTA----CATACCATTGAATGCTACAGAAGAAAAGACAATGAGGGATTACTC-ATAAACATTGCCTTTAAGATATCCTTCCAAAGGAAACC-AGTGTCCCTGTGTTTGGACTCACAGAGCAGGAATGTTTACCTTGCTTTGATATCACCAACAAACA--CTTGTGACTAGTCATTGAATTCTAATGTATTTAAGCCGTCTTGAGAGTAGAGCCCCTAGGGAAAACTACAAATGGAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101160160 353 + 101219884 ACTTGGCAAAGATTAT--GGTTTTTCATGAAGAAATATAGGCATATTTAAACACTCAGGGTCTGAGAATCCAAAATATATGAAACTT--AACAAGTGG----TCTCTAAGTAGTTTTTGTTTCTAAATTATAGTA----CATACCATTGAATGCTACAGAAGAAAAGACAGTGAGGGATTACTC-ATAAACATTGCCTTTATGATATCCTTCCAAAGGAAACCAAGTGTCCCTGTGCTTGGACTCACAGAGTAGGAATGTTTACCTTGCTTTGGTATCACCAACAAACA--CTTGTGACTAGTCATTGAATTCTAATGTATTTAAACCATCTTGAGAGTAGAGCCCTTAGGGAAAACTACAAATGGAA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11105879 345 +  39895921 ACTAGGCAAAGATCCT--GATTTTTTATGCA-AACTATAGGCAGATTAAAACACTGACGTTCTGAGATTCTGA-------GAAACTTTACACAAGTGGATTTTATCTGAGTAGTTCCAGTTTCTAAAGTAGGATATAGTCATGTCA---------ACAAAATGGGGGAAATCAACTGATTACTTGGTAAACATTGCCTTTGTGATA----TACAAAGGAAACCGTGTGTTTTTGTGCTTGAGTTCACAGAGCAAGAACATTTAGCTTGCTTGGATATCACTAAAGAAGAATTTTATAATTATTTATAGAATTCTAACTCATTTAAGCCATCTTGAGAGTAGCACCCATGAGAAAAAGAACATATGGAA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159741935 938 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e mm10.chr16                       75505666 1915 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=240206.000000
s hg38.chr14_KI270722v1_random        19478 102 +    194050 AATTCATTG-ATTTTTGACTTTGCTTTCCTATGGATTAAATTTAACACTTTCTTGTAAA-TCTCTCCCTTTACAGATCATATGTGATAAATAGTTATCCAACTT
s panTro4.chr3                    125102739 102 - 202329955 AATTCATTG-ATTTTTGATTTTGCTTTCCTATGGATTAAATTTAACACTTTCTTATAAA-TCTCTCCCTTTGCAGACCATATGTGATAAATAGTTATCCAACTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44097638 102 +  86207423 AATTCATTG-ATTTTTGATTTTGCTTTCCTATGGATTAAATTTAACACTTTCTTATAAA-TCTCTTCCTTTGCAGATCATATGTGATAAATAGTTATCCAACTT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192457161 102 - 192599291 AATTCATTG-ATTTTTGATTTGACTTTCCTATGGATTAAATTTAGCACTTTCTTATAAA-TCTCTCCCTCTGCAGATCATATGTGATCAATAGTTATCCAACTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192295730 102 + 192460366 AATTCATTG-ATTTTTGATTTGACTTTCCTATGGATTAAATTTAGCACTTTCTTATAAA-TCTCTCCCTCTGCAGATCATATGTGATCAATAGTTATCCAACTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187266833 102 - 187378091 AATTCATTG-ATTTTCGATTTGACTTTCCTATGGATTAAATTTAGCACTTTCTTATAAA-TCTCTCCCTCTGCAGATCATATGTGATCAATAGTTATCCAACTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101160513 102 + 101219884 AATTCATTG-ATTTTCAATTTGACTTTCCTATGGATTAAATTTAGCACTTTCTTATAAA-TCTCTCCCTCTGCAGATCATATGTGATAAATGGTTATCCAACTT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75507581  99 +  98207768 AATGCAGTA-GCCTTTGATTTGGTATTTCTCTGACTCGAGCTTAGCATATCCTTGGCAA-CCTCCTTCT---CAGAACATATGCTATGAATATCCATCCAACTT
i mm10.chr16                      I 1915 I 336
s canFam3.chr31                    11106224 104 +  39895921 AGCTTATTGTTTTTTTGGTTGGGCATTCCTTTGGGTTAAATTTAGCACTTCCTTTTAAACTATCTCCCTTTGTAGGTCATGTATGATTTATATACACTTAACTT
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159741935 938 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=1201445.000000
s hg38.chr14_KI270722v1_random        19580 601 +    194050  
s panTro4.chr3                    125102841 627 - 202329955  
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21                    44097740 602 +  86207423  
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192457263 604 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192295832 604 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187266935 604 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101160615 604 + 101219884  
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11106328 784 +  39895921  
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159741935 938 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e mm10.chr16                       75507680 336 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=16690.000000
s hg38.chr14_KI270722v1_random        20181 6 +    194050 TTTCCA
s panTro4.chr3                    125103468 6 - 202329955 TTTTCA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159742873 6 - 202140232 TTTCCA
i ponAbe2.chr3                    I 938 C 0
s nomLeu3.chr21                    44098342 6 +  86207423 TTTACA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192457867 6 - 192599291 TTTCCA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192296436 6 + 192460366 TTTCCA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187267539 6 - 187378091 TTTcca
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101161219 6 + 101219884 TTTCCA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11107112 6 +  39895921 CTTCCA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e mm10.chr16                       75507680 336 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=44120.000000
s hg38.chr14_KI270722v1_random        20187 13 +    194050 ACAAATTTAAGAA
s panTro4.chr3                    125103474 13 - 202329955 ACAAATTTAAGAA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159742879 13 - 202140232 ACAAATTTAAGAA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44098348 13 +  86207423 ACAAATTTAAGAA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192457873 13 - 192599291 ACAAATTTAAGAA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192296442 13 + 192460366 ACAAATTTAAGAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187267545 13 - 187378091 acaaatttaagaa
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101161225 13 + 101219884 ACAAATTTAAGAA
i chlSab2.chr22                   C 0 I 164
s mm10.chr16                       75508016 13 +  98207768 ATACACTTAAGAA
i mm10.chr16                      I 336 I 8
s canFam3.chr31                    11107118 12 +  39895921 -TCAACTTGAGAA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=1082791.000000
s hg38.chr14_KI270722v1_random        20200 417 +    194050 ATGTGTACACACTTGAGG-GGACTT-AAGAAGTCTCTGA--------CTA-------AAACACTAGAAAAGAAAAGCA-GTGAAAA--GCCAAATAACTATTACTCAACAATAACGACATTTGTTACTATTATATTAATATTAAAC---ACACTATTAAGCAACAACATTTCAGTTACTCACTGAGCCCAAAGTCATTTTTCATGAACCATTCACAACACTGATAACCTATTG-AAAAATGATTGAAAA--------CAAAAAAgcttattgctttccaagtccttttaaagccttctcatgtgtcatttcat-ataatccttataacgaatctatggagtatatactgactttatctctgtacagaaaagaaaactgagtta--tattcag-aataagttgcaaagttccccagataatcagtgtcataggtgaaatttgaTGTCACAGTGT
s panTro4.chr3                    125103487 413 - 202329955 ATGTGTACACACTTGAGG-AGGCTT----AAGTCTCTGA--------CTA-------AAACACTGGGAAAGAAAAGCA-GTGAAAA--GAAAAATAACTATTACTCAACAATAACAACATTTATTACTATTATATTAATATTAAAC---ACACTATTAAGCAACAACATTTCAGTTACTCACTGAGCCCAAAGTCATTTATCATGAACCATTCATGACACTGATAACCTATTG-AAAAATGACTGAAAA--------CAAAAAAgcttattgctttccaagtccttttaaagccttctcacgtgtcatttctt-ataatccttataacgaatctatgaggtatatactgactttatctctgtacagaaaag-aaactgagtca--tattcag-aataagttgcagagttccccagataatcagtgtcataggtgaaatttgatgtcacagtct
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159742892 404 - 202140232 ATGGGTACACTCTGGAGGAAGGCTT-AAGAAGTCTCTGA--------CT--------AAACAGTGGAAAAGAAAAACAGGGGAAAA--GCAAAATAACTATTACTCAACAATA---ACATTTATTACCTTTATATTAATATTAAAC---ACACTATTAAGCATCAACATTTCAGTTACTCAGTGAGCCCAAAGTCATTTTTCATGAACCATTCACAACACTGATAACCTAT------------TGAAAA--------CAAAAAAgcttattgttttccaagtccttttaaagccttctcatgtgtcatttcat-ataatccttataatgaatctatggggtatatactgactttatctctgtacagaaaagaaaactgagtcg--tattcag-aataagttgcaaagttcccctgatattcagtgtcataggtgaaatttgatgtcacagtct
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44098361 413 +  86207423 ATGTGTACACTCTCGAGG-AGGCTT-AAGAAGTCTCTGA--------CTA-------AATCACTGGAAAAGAAAAGCA-GTGAAAA--GCAAAataactattactcaacaataacaacatttattactattatactaata-taaAC---ACACTATTAAGCAT---CATTTCAGTTACTCACTGAGCCCAAAGTCATTTTTCATGAACCATTCACAACACTGATAACCTATTG-AAAAATGATTGAAAA--------CAAAAAAgcttattgctttccaagtccttttgaagccttctcatgtgtcatttcat-ataatccttataacgaatctatgaggtatatactgactttatctctgcacagaaaagaaaactgagtca--tattcag-aataagttgcaaagttccccagataatcagtgtcataggtgaaatttgatgtcacagtct
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192457886 411 - 192599291 ATGTGTACATTCTTGAGG-AGACTT-AAGAAGTCTCTGA--------CTA-------AAACACTGGAAAAGAAAAGCA-G-GGAAA--GCAAAATAACTATTACTCAACAATAACAACGTTTATTACTATTATGTTAATATTAAGC---ACACTATTAAGCATCAACATTTCAGTTACTCACTGAGCCCAAAGTCATTTTTCATAATCCATTCACAACACTGATAACCTATTA-AAAAA----TGAGAA--------CAAAAAAgcttattgctttccaagtccttttaaagccttctcatgtgtcatttcat-ataatccttataatgaatctatgaggtatataccaactttatctctgcacagaaaagaaaactgagtca--tatacag-aataagttgcaaagtt-cccaaataatcagtgtcataggtgaaatttgatgtcacagtct
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192296455 411 + 192460366 ATGTGTACATTCTTGAGG-AGACTT-AAGAAGTCTCTGA--------CTA-------AAACACTGGAAAAGAAAAGCA-G-GAAAA--GCAAAATAACTATTACTCAACAATAACAACGTTTACTACTATTATGTTAATATTAAGC---ACACTATTAAGCATCAACATTTCAGTTACTCACTGAGCCCAAAGTCATTTTTCATAATCCATTCACAACACTGATAACCTATTA-AAAAA----TGAGAA--------CAAAAAAgcttattgctttccaagtccttttaaagccttctcatgtgtcatttcat-ataatccttataatgaatctatgaggtatataccaactttatctctgcacagaaaagaaaactgagtca--tatacag-aataagttgcaaagtt-tccaaataatcagtgtcataggtgaaatttgatgtcacagtct
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187267558 416 - 187378091 atgtgTACATTCTTGAGG-AGACTT-AAGAAGTCTCTGA--------CTA-------AAACACTGGAAAAGAAAAGCA-GTGAAAA--GCAAAATAACTATtactcaacaataacaacatttattactattatattaatattaagc---aCACTATTAAGCATCAACATTTCAGTTACTCACTGAGCCCAAAGTCATTTTTCATAATCCATTCACAACACTGATAACCTATTA-AAAAATGATTGAGAA--------CAAAAAAGCTTATTGCTTTCCAAGTCCTTTTAAAGCCTTCTCATGTGTCATTTCAT-ATAATCCTTATAATGAATCTATGAGGTATATACCAACTTTATCtctgcacagaaaagaaaactgagtca--tATACAG-AATAAGTTGCAAAGTT-CCCAAATAATCAGTGTCATAGGTGAAATTTGATGTCACAGTCT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101161402 405 + 101219884 ATGTGTACATTCTTGAGG-AGACTT-AAGATGTCTCTGA--------CTA-------AAACACTGGAAAAGAAAAGCA-GTGAAAA--GCAAAataactattactcaacaataaca---tttattactattatattaatattaAGC---ACACTATTAAGCATCAACAGTTCAGTTACTCACTGAGCCCGAAGTCATTTTTCATAATCCATTCACAATACTGATAACCTGTTA-AAAAA----TGATTG--------AGAAAAAgcttattgctttccaagtccttttaaagccttctcatgtgtcatttcat-ataatccttataatgaatccatgaggtatatactgactttatctctgtac-----agaaaactgagtca--tatacag-aataagttgcaaagttccccagataatcagtgtcataggtgaaatttgatgtcacagtct
i chlSab2.chr22                   I 164 C 0
s mm10.chr16                       75508037 400 +  98207768 ATGTATATATTATTGAAA-AGGCTT-TACTA-TCTCTGG--------CAAATAAAATAAATAAAGAAAAAGAAAATAA-GAGAAAGCTGAAAATTAGATA-----CATAAATGGCTGCAATTATTAACACTATTAATATATCAAAA---ACTCTAT-------------TCCAGT-------TTAGGTCAAATTCATTTAACATCAACCATGTACAACACTGATAAACTATTATTGACATCCTTGATTAGTCTTTTGAATAATAATTTAGGATTTGCC-------TTTTAAGCTTTTACAGTAGGTATTTTATCATACTCATTATAAGAAATGTATAAG--ATATACAAACTTCATTGCAACATGGGAAAAGAAACTGAGTTATCTAGACAGTAGTAGGAGACAATATTACCAAGATAG--AATTTGATA--TGAAATTTTATTTCTCAGTGT
i mm10.chr16                      I 8 I 561
s canFam3.chr31                    11107130 400 +  39895921 ATGTATACACTCTTGAAA-AGATTTTAAAAAGTCTCTGGACAAAGACCAA-------AAACACTAAGAATGAATATCA-GTCAATA--GTGAAATAACTA-----------------CATTTATTAATGTTATATTAATAATACATTGAATACTGTTAACCATTAACATTT-ATTCATTTATTGAGCCAAAACTCACTTAACATCAACTGTATATGACATTGATATACTAT------------TGAGAA--------AAtaagagcttaccatcttctaattccttctaaagcctttacatgtgtgattttat-gcaatccttataataaatttatgagatatatactgattttataattccacagagaagaaaattgagtct--tatagat-agtaagttgtaataacacttggataatcagtgacattgttgatatttgaagtcaCAGGat
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=253888.000000
s hg38.chr14_KI270722v1_random        20617 94 +    194050 AGTCAAGTGTAATTTAGGGAAGcagtacaaatgatggttgaaagcacaggttctggggtaaatagcctgaagtcaaaatctagttcatatcctc
s panTro4.chr3                    125103900 94 - 202329955 agTCAAGTATAATTTAGGGAAGcagtacaaatgatggttgaaagcacaggctctggggtaaatagcctgaagtcaaaatctagttcatatcctt
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159743296 94 - 202140232 agTCAAGTATAATTTAGGGAAGcagtacaaatgatggttgaaagcgcaggctctggggtaaatagcctgaagtcaaaatctagttcacagcctt
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44098774 94 +  86207423 agttGAGTGTAATTTAGGGAAGcagtacaaatgatggttgaaagcacaggctctgggataagtagcctgaagtcaaaacctagttcatatcctt
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192458297 94 - 192599291 agTCAAGTATAATTTAGGGAAGcagtacaaatgatggttgaaagcacaggctctggggtaaacagcctgaagtcaaaatctagttcatatcctt
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192296866 94 + 192460366 agTCAAGTATAATTTAGGGAAGcagtacaaatgatggttgaaagcacaggctctggggtaaacagcctgaagtcaaaatctagttcatatcctt
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187267974 94 - 187378091 AGTCAAGTATAATTTAGGGAAGCACTACAAATGATGGTTGAAAGCACAGGCTCTGGGGTAAACAGCCTGAAGTCAAAATCTGGTTCATATCCTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101161807 94 + 101219884 agTCAAGTATAATTTAGGGAAGcagtacaaatgatggttgaaagcacaggctctggggtaaacagcctgaagtcaaaatctagttcatatcctt
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11107530 78 +  39895921 agtaaagtataattaagagaag-agca-aaattatggttgaaagcataggctcttgatta--------------aaattttacctcctcccttt
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e mm10.chr16                       75508437 561 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=1252480.000000
s hg38.chr14_KI270722v1_random        20711 402 +    194050 agtggctgtgtgatcttgggaaatttcccttaactctctgtgtcttggttttatagtttcatccatttttgcctctcatatgagctggtgagcattacactagtttatgcttctaggacactgaaaacagtacctggctcttgataaatattaacaatTTTGTTTCATTGTCTTCACCTTGAGTATTTCATGGCCAGATGGAAATCAATGTCAATATGAAAAAATGTTCAT-AATTCAGCAGGAAGAAATACAAAACCATATAAACAACTTTGTTTTACTGGCAAGTGTATTTGGAAGCTATGTTAAATTGA------GAAGGGGAAGCCTCTAAGGATATCGATTAATCAATGACCGAAAGCTGATGAGACTTGTCTGCAA----------TTTTTTTTTGGAGACTCTGAGACTTAA----------
s panTro4.chr3                    125103994 403 - 202329955 agtggctgtgtgatcttgggaaatttcccttaa--ctctgtgacttggttttatagtttcatccatttttgcctctcatatgagctggtgagcatcacactagtttatgcttctaggaaacttaaaacagtacctggctcttgataaATATTAACCATTTTGTTTCATTTTCTTCACCTCGAGTATTTCATGGCCAGATGGAAATCAATGTCAATATGAAAAAATGTTCAT-AATTCAACAGGAAGAAATACAAAACCATATAAACAACTCTGTTTTACTGGCAAGTGTATTTGGAAGCTATGTTAAATTGAGAAAGGGAAGGGAAAGCCTCTAAGGGCATCGATTAATCAATGACCAAAAGCTGATGAGA-TTATCTGGAA------------TTTTTTTGGAGACTCTGAGACTTAA----------
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159743390 406 - 202140232 agtggctgtgtgatcttgggaaatttcccttaactctctgtgtcttggttttatagtttcatccatttttgcctctcatatgagctggtgagcatcacactagtttatgcttctaggacacttaaaacagtacctggctcttgataaATATTAACCATTTTGTTTCATTTTCTTCACCTTGAGTA-TTCATGGCCAGATGGAAATCAATGTCAATATGAAAAAATGTTCAT-AATTCAACAGGAAGAAATACAGAAGCATATAAACAACTTTGTTTTACCGGCAAGTGTTTTTGGAAGCTATGTTAAATTGAGAAGGGGAAGGGAAAGCCTCTAAGGGCATTGATTAATCAATGACTGAAAGCTGATGAGACTTGTCTGGAA-----------TTTTTTTTGGAGACTCTGAGACTTAA----------
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44098868 403 +  86207423 agtggctgtgtgatcttgggaaatttcccttaactctctgtgtcttggttttatcgtttcatccatttttgcctctcatatgagctggtgagcatcacactagtttatgcttctaggacacttaaaac--tacctggcTCTTGATACATTTTAACCATTTTGTATCATTTTCTTCACCTTGAGTATTTCATGGCCAGATGGAAATCAATGTCAATATGAAAAAATGTTCAT-AATTCAACAGGAAGAAATACAAAACCTTATAAACAACTTTGTTTTACTGGCAAGTATATTTGGAAGCTATGTTAAATTGAGAAAGGGAAGGGAAAGCCTCTAAGGGCATCGATTAATCAATGACTGGAAGCTGATGAGACTTGTCTGGGA-------------TTTTCTGGAGACTCTGAGACTTAA----------
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192458391 414 - 192599291 agtggctgtgtgatcttgggaaatttcccttaactctctgtgtcttggttttatagtttcatccatttttgcctctcatgtgagctgctgagcatcacacttgtttatgcttctaagacacttaaaactgtacctggctcttgataaATATTGACCATTTTGTATCATTTTCTTCACCTTGAGTATTTCATGGCCAGATTGAAATCAATGTCAATATGAATAAATGTTCAT-AATTCAACAGGAAGAAATACAAAACCATATAAACAACTTTGTTTTACTGGCAAGTGTATTTGGAAGCCGTGTTAAATTGAGACGGGGAAGGGAAAGCCTCTAAGGACACTGATTAATCAATGACTGAAAGCTGATGACACTTGTCTGGAA----TTTTTTTTTTTTTTTGGAGACTCTGAGACTTAA----------
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192296960 414 + 192460366 agtggctgtgtgatcttgggaaatttcccttaactctctgtgtcttggttttatagtttcatccatttttgcctctcatgtgagctggtgagcatcacacttgtttatgcttctaagacacttaaaactgtacctggctcttgataaATATTGACCATTTTGTATCATTTTCTTCACCTTGAGTATTTCATGGCCAGATTGAAATCAATGTCAATATGAATAAATGTTCAT-AATTCAACAGGAAGAAATACAAAACCATATAAACAACTTTGTTTTACTGGCAAGTGTATTTGGAAGCTGTGTTAAATTGAGACGGGGAAGGGAAAGCCTCTAAGGACACTGATTAATCAATGACTGAAAGCTGATGACACTTGTCTGGAA----TTTTTTTTTTTTTTTGGAGACTCTGAGACTTAA----------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187268068 418 - 187378091 agtggctgtgtgatcttgggaaattTCCCTTAACTCTCTGTGTCTTGGTTTTATAGTTTCATCCATTTTTGCCTCTCATGTGAGCTGGTGAGCATCACACTTGTTTATGCTTCTAAGACACTTAAAACTGTACCTGGTTCTTGATAAATATTGAccattttgtatcattttcttcACCTTGAGTATTTCATGGCCAGATTGAAATCAATGTCAATATGAATAAATGTTCAT-aattcaacaggaagaaatacaaaaccaTATAAACAACTTTGTTTTACTGGCAAGTGTATTTGGAAGCTATGTTAAATTGAGACGGGGAAGGGAAAGCCTCTAAGGACATCGATTAATCAATGACTGAAAGCTGATGACACttgtctggaatttttttttttttttttttggagactctgAGACTTAA----------
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101161901 412 + 101219884 agtggctgtgtgatcttgggaaatttcccttaactctctgtgtcttggtttTATAGTTTCATCCATTTTTGCCTCTCATGTGAGCTGGTGAGCATCACACTTGTTTATGCTTCTAGGACAC---ACACTATACCTGGCTCTTGATAAATATTGACCATTTTGTATCATTTTCTTCACCTTGAGTATTTCATGGCCAGATTGAAATCAATGTCAATATGAATAAATGTTCAT-AATTCAACAGGAAGAAATACAAAACCATATAAACAACTTTGTTTTACTGGCAAGTGTATTTGGAAGCTATGTTAAATTGAGAAGGGGAAGGGAAAGCCTCTAAGGACATCGATTAATCAATGACTGAAATCTGATGAGACTTGTCTGGAA---TTTTTTTTTTTTTTTTGGAGACTCTGAGACTTAA----------
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75508998 389 +  98207768 AGAAGCTTTGTGATTTCGGGAAAGACCACTTGTATCTTTAAGTCT--------TAGTTTGACCTAGTTTTGCCTCTCA--TGGACTAGGGACAATCCCATTAGCTTCTACATGTAGGAAAC---AAAC---ACCTGACTCTTGCTCAAAAAAACCCATCATGTATCGTTTTCTTCATCTTGATGAGTTTACAGCCAGAAGGAAATCAATGTCAATGTGGATAAATGCTCAC-AAGTCTACAGGAGGAAATATAAAACCATATAAACAGCTTCATTTTACTGGAAAG-GTATTTGAAAGCTATGTTAAATTGAGAAGGGGGA-AGAAGGTCTCTAAGGGCAT-GGTGAATCAGTAACTGGAAGCTGATGAGGCTTGTCTGGAA----------TATTATCTTGGAGACTCTGAGACTTAA----------
i mm10.chr16                      I 561 I 4
s canFam3.chr31                    11107608 393 +  39895921 ggcagctgtgcaattctgggaaatttcccttacctctctgtgccttagtttTACATATGCATCAGTTTGTCCCTCTCTTATGGGCTGCT----ATTACACT----------------ATACTTACAACAGTAGCTGGCTTTTGACAAATATTAGTCATCTTGTACCATTTTCTTCACCTTGTATAGCTTATGGTCTGATAGAAATCAATGTCAAGATGAATAAATGGTTATAAAGGCACCAGGAAGAAATGCAAAACCATAGAAACAATTCTATTTGACTGTAAAGCACATTTGAAAGCTCTGTTAAATTGAGAAGGGGAAGGATGAG------ATCACAACGGTGAATCAGCGACTGGAAACTCATGAGGCTTGTTAGAAA----------TATTCTGTTGGAGATCCTAAGTCTTAAAAAAAAAAAA
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e otoGar3.GL873528                 18023167 6403 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=6006.000000
s hg38.chr14_KI270722v1_random        21113 1 +    194050 A
s panTro4.chr3                    125104397 1 - 202329955 A
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159743796 1 - 202140232 A
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44099271 1 +  86207423 A
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192458805 1 - 192599291 A
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192297374 1 + 192460366 A
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187268486 1 - 187378091 A
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101162313 1 + 101219884 A
i chlSab2.chr22                   C 0 C 0
s micMur1.scaffold_3530               98687 1 +    180192 A
i micMur1.scaffold_3530           N 0 C 0
s otoGar3.GL873528                 18029570 1 -  38779656 A
i otoGar3.GL873528                I 6403 C 0
s mm10.chr16                       75509391 1 +  98207768 A
i mm10.chr16                      I 4 C 0
s canFam3.chr31                    11108001 1 +  39895921 A
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     28718 9057 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE939969v1                 333125 5847 +    345090 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=2492.000000
s hg38.chr14_KI270722v1_random        21114 1 +    194050 G
s panTro4.chr3                    125104398 1 - 202329955 A
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159743797 1 - 202140232 A
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44099272 1 +  86207423 A
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192458806 1 - 192599291 A
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192297375 1 + 192460366 A
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187268487 1 - 187378091 A
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101162314 1 + 101219884 A
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE939969v1                 338972 1 +    345090 G
i tarSyr2.KE939969v1              I 5847 N 0
s micMur1.scaffold_3530               98688 1 +    180192 G
i micMur1.scaffold_3530           C 0 I 2409
s otoGar3.GL873528                 18029571 1 -  38779656 G
i otoGar3.GL873528                C 0 I 1045
s tupBel1.scaffold_136731.1-86001     37775 1 +     86001 G
i tupBel1.scaffold_136731.1-86001 I 9057 I 6346
s mm10.chr16                       75509392 1 +  98207768 G
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11108002 1 +  39895921 G
i canFam3.chr31                   C 0 C 0
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=969269.000000
s hg38.chr14_KI270722v1_random        21115 333 +    194050 TTTTGACA-AAATAAGGAGATGAATT--GAGTAGTGT--GGAAGAGACATTTTCTGAAGTCATCAGA--------------GAAAGGAGAGACAAATAT-GTAAGGGGAAAGTGGTATGAAGTAATAATATCTATGAAGTGTTTTCTAAAGTATAACACATGTAAGTTGTGTTAAATGTAATCTATCATGAT---T---ATATCATTACTGTCTGACTGATACAACTATATCCACCTCAGTTAGCCACATAAGATCAATTTTCCTATACCTTAGAGAATACCAGTAACCTCCAGTTCAGAAACAGCATAAATATCTATCCACAGCTGAGCAGACACATACAGCTAGCTACCAGATGAAA
s panTro4.chr3                    125104399 335 - 202329955 TTTTGACACAGATAAGGAGATGAATT--GAGTAGTGT--AGAACAGACATTTTCTGAAGTCAGCAGA--------------GAAAGGAGAGACAAATATGGTAAGGGGAAAATGGTATTAAGTAATAATATCTATGAAGTGCTTTCTAAAGTATAACACAAGTAAATTCTGTTAAATGTAAACTATCATGAT---T---ATATCACTACTGTCTGACTGATACAACTATATCCACCTCAGTTAGCCACATAAGATCAATTTTCCTATACCTTAGAGAATACCAGTAACCTACAGTTCAGAGACAGCATAAATATCTATCCACAGCTGAGCAGACACATACAGCTAGCTACCAGATGAAA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159743798 335 - 202140232 TTTTGACAAAGATAAGGAGATGAATT--GAGTAGTGT--GGAAGAGACATTTTCTGCAGTCAGCAGA--------------GAAAGGAGAGACAAATATGGTAAGGGGAAAATGGTATTAAGTAATAATAACTATGAAGTGCTTTCTAAAGTATAACACATGTAAATTGTGTTAAATATAAACTATCATGAT---T---ATATCATTACTGCCTGACTGATACAACTATATCCACCTCAGTTAGCCACATAAGATCAATTTTTCTATACCTTAGAGAATACCAGTAACCTCCAGCTCAGAGACAGCATAAATATCTATCCACAGCTGAGCAGACACATACAGCTAGCTACCAGATGAAA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44099273 334 +  86207423 TTGTGACAAAGATAAGGAGATGAATT--GAGTAGTGT--GGAAGAGACATTTTCTGAAGTCAGCAGA--------------G-AAGGACAGACAAATATGGTAAGGGGAAAATGGTATTAAGTAATAATATCTATGAAGTGCTTTCGAAAGTATGACACATGTAAATTGTGTTAAATATAAACTATCATGAT---T---ATATCATTACTGTCTGACGGATACAACTATTCCCACTTCAGTTAGCCACATAAGATCAATTTTCCTATACCTTAGAGAATACCAGTAACCTCCAGTTCAGAGACAGCTTAAATATCTATCCACAGCTGAGCAGACACATACAGCTAGCTACCAGATGAAA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192458807 338 - 192599291 TTTTGACAAAGATAAGGAGATGAATT--GAGTAATGT--GGAAGAGACATTTTCTGAAGTCAGTAGA--------------GAAAGGAGAGACAAATATGGTAAGGGGGAAATGGTATTAAGTAATAATATCTATGAAGTGCTTTCTAAAGTATAACACATGTAAATTGTGTTAAATGTAAACTATCATGAT---TATAATATCATTACTGTCTGACTGATACAACTATATCAACCTCACTTGGCCACATAAGAACAATTTTTCTATACCTTAGAGAATAGCAATAACCTCCAGTTCAGAGAGAGCATAAATATCTATTCACAGTTGAGCAGACACATACAGCTAGCTATCATATGAAA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192297376 338 + 192460366 TTTTGACAAAGATAAGGAGATGAATT--GAGTAATGT--GGAAGAGACATTTTCTGAAGTCAGTAGA--------------GAAAGGAGAGACAAATATGGTAAGGGGGAAATGGTATTAAGTAATAATATCTATGAAGTGTTTTCTAAAGTATAACACATGTAAATTGTGTTAAATGTAAACTATCATGAT---TATAATATCATTACTGTCTGACTGATACAACTATATCAACCTCACTTGGCCACATAAGAACAATTTTTCTATACCTTAGAGAATAGCAATAACCTCCAGTTCAGAGAGAGCATAAATATCTATTCACAGTTGAGCAGACACATACAGCTAGCTATCATATGAAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187268488 338 - 187378091 TTTTGACAAAGATAAGGAGATGAACT--GAGTAATGT--GGAAGAGACATTTTCTGAAGTCagtaga--------------gaaaggagagacaaatATGGTAAGGGGGAAATGGTATTAAGTAATAATATCTATGAAGTGCTTTCTAAAGTATAACACATGTAAATTGTGTTAAATGTAAACTATCATGAT---TATAATATCATTACTGTCTGACTGATACAACTATATCAACCTCACTTGGCCACATAAGAACAATTTTTCTATACCTTAGAGAATAGCAATAACCTCCAGTTCAGAGAGAGCATAAATATCTATTCACAGTTGAGCAGACACATACAGCTAGCTATCATATGAAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101162315 338 + 101219884 TTTTGACAAAGATAAGGAGATGAATT--GAGTAATGT--GGAAGAGACATTTTCTGAAGTCAGCAGA--------------GAAACGAGAGACAAATATGGTAAGGGGAAAATGGTATTAAGTAATAATATCTATGAAGTGCTTTCTAAAGTATAACACAAGTAAATTGTGTTAAATGTAAACTATCATGAT---TATAATATCATTACTGTCTGACTGATACAACTATATCAACCTCACTTGGCCACATAAGAACAATTTTTCTGTATCTTAGAGAATAGCAATAACCTCCAGTTCAGAGAGAGCATAAATATCTATTCACAGCTGAGCAGACACACACAGCTAGCTGTCATATGAAA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75509393 326 +  98207768 TTTGGACAGCGGAGTGAAGATGATTGAAGAGCATTGT--GGGAGAGACATTTTCTGTAGTCAGCAGA--------------GACAAGGGAGACAAGTGTGATAA-GGGAATATGGTATTAAGTAATAATGTCT-TTAAGTGGGTCC-ATGGGGTTATAAATGCAAGGTGTGTAAAAAGTAAATCACCATGATGACTATAGCATCCTTATTGCCTGACTGATG----TACATCTATGTGAATTGGCCAT-TGAGATTAATTTTCCCAGCC---AGTGAATACCATTAAACTCCAGTC--AGGGTATCAGAAATGTGTCTCCCCAGCTGAG----GATGTGTGGACCATTCTTGAATGATG
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11108003 345 +  39895921 TTTTGACAAAGGGAAGGAGATGA-TT--GAATAATGTTGGGAAAAGACATTTTCTGAAATCAGCAAGTATTCTTGTTCAATAACAAGAAAGACAAATACAGTAA-AGGAAAACAATATAAAGTAAAAATGTATTTGAAGTGCTTTCTAAAGGGTAACACATGTAAAATCGGCTGTATGtaaattattacaat---tataatattattattCCCTGGCTAATGCACCC-CAGCCATATCACTTGGCCATGTGAGATCAA-TTTCCCATGCCTCAAAGAATACCAATAATATCTAA-TCAGAGGTATCAGCAACCTCTGTCCACAGCTGAGTAGACCCTCACAG----CTATTGGGTGAAA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=670591.000000
s hg38.chr14_KI270722v1_random        21448 279 +    194050 TGGGCTATATCTTCAAATACTATTGTTTTCCGttttttaactgtggcaaaacac----actcaacaatttgcatcttaactactgttaagtatacaattcagtgtcatta----------------------------------------------------------aat--gtattcacaatgttgtgcaagcatcaccaccacccatctccataattctttttgtcttgtaaaattgaaatcctgtacccattaaaaagtgactccccattccccgccctcccagggcaactacaactttactttctgtcttgat---------------------gaatCATACAATATCAAATGGAATT
s panTro4.chr3                    125104734 279 - 202329955 TGGGCTATATCTTCAAATACTATTGTTTTCCAttttttaattgtggcaaaatac----actcaacaatttgcatcttaaccactgttaagtatacaattcagtgttatta----------------------------------------------------------aat--gtattcacaatgttgtgcaagcatcatcacgacccatctccataattctttttgtcttgtaaaatggaaatcctgtacccattaaacagtgactccccattccccgccctcccagggcaactacagctttactttctgtcttgat---------------------gaatCATACAATATCAAATGCAAAT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159744133 277 - 202140232 TGGGC--TATCTTCAAATACTATTGTTTTCCAttttttaattgtggcaaaatac----actcaacaatttgcatcttaaccactgttaagtatacaagtcagtgttatta----------------------------------------------------------aat--gtgttcacaatgttgtgcaagcatcaccaccacccatctccataattctttttgtcttgtaaaattgaaatcctgtacccattaaacagtgactccccattccttgccctcccagggcaactaaagctttactttctgtctTGAA---------------------GAGTCATACAATATCAAATGCAGTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44099607 279 +  86207423 TGGGCTATATCTTCAAATACTATTGTTTTCCAttttttagttgtggcaaaatac----actcaacaatttgcatcttaaccactgttaagtatacaattcagtgttatta----------------------------------------------------------aat--gtattcacaacgttgtgcaagcatcaccaccacccatctccataattctttttgtcttgtaaaattgaaatcctgtacccattaaacagtgactccctattccccgccctcccagggcaattacagctttactttctgtcttgat---------------------gaatCATACAGTATCCAATGCAATT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192459145 277 - 192599291 TGGGCTATATCTTCAAACATTATTGTTTTTCAtttttttattgtggcaaaatac----actcaacaatttgcatcttaaccacttttaagtctacaattcagtgttatta----------------------------------------------------------aat--gtattcacaacgttgtgcaagcatcaccaccacccatgtccataat--tttttgttttgtaaagttgaaatcctgtacccattaaacagtgactccccattccccgccctcccagggcaactaccgctttactttctgtcttgat---------------------gaatCATACAGTATCAAATGGAATT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192297714 277 + 192460366 TGGGCTATATCTTCAAACATTATTGTTTTTCAtttttttattgtggcaaaatac----actcaacaatttgcatcttaaccacttttaagtctacaattcagtgttatta----------------------------------------------------------aat--gtattcacaacgttgtgcaagcatcaccaccacccatgtccataat--tttttgttttgtaaagttgaaatcctgtacccattaaacagtgactccccattccccgccctcccagggcaactaccgctttactttctgtcttgat---------------------gaatCATACAGTATCAAATGGAATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187268826 277 - 187378091 TGGGCTATATCTTCAAacattattgtttttcatttttttattgtggcaaaatac----actCAACAATTTGCGTCTTAACCACTTTTAAGTCTACAATTCAGTGTTATTA----------------------------------------------------------Aat--gtattcacaatgttgtgcaagcATCGCCACCACCCATCtccataat--tttttgttttgtaaagttgaaatcctgtacccattaaacagtgaCTCCCCATTCCCCGCCCTCCCAGGGCAACTACCGctttactttctgtcttgat---------------------gaatcATACAGTATCAAATGGaatt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101162653 277 + 101219884 TGGGCTATATCTTCAAACATTATTGTTTTCCAtttttttattgtggcaaaatac----actcaacaatttgcatcttaactacttttaagtctacaattcagtgttatta----------------------------------------------------------aat--gtattcacaatgttgtgcaagcatcaccaccacccatccccataat--tttttgttttgtaaaattgaaatcctgtacccattaaacagtgactccccattctccaccctcccagggcaactaccgctttactttctgtcttgat---------------------gaatCATACGGTATCAAGTGGAATT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75509719 345 +  98207768 TTACCCATCTACTTTGATAAAATTGTTTAATATT-------TACAGCTAATTACACAAACATAAAATATTACATCTTAATCACTTATA--TATACTGTTCAGTATTATtaatataatataattaatatataatataatataatataatatataattaatatacaatataattaatatTCGTAATTTTGTACACCAATCTCTGCCGTTCACTTCCAAAATTACTATTGTCTTAAAAAACAGAA---CTGTATCCCTTAAACAAAGACTTTCAGTCTTTCA--CTGCCGGTGTATT-----CCATATCTCCTGTCCCCATGACTAAGCATCTCATAGACTGGAATTATACAGTGTTATGTGTAAAG
i mm10.chr16                      C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e canFam3.chr31                    11108348   0 +  39895921 C
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=39466.000000
s hg38.chr14_KI270722v1_random        21727 11 +    194050 TTTAAGATATT
s panTro4.chr3                    125105013 11 - 202329955 TTTAAGATATT
i panTro4.chr3                    C 0 I 6198
s ponAbe2.chr3                    159744410 11 - 202140232 TTTAAGATATT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44099886 11 +  86207423 TTTAAGATATT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192459422 11 - 192599291 TTTAAAATGTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192297991 11 + 192460366 TTTAAGATGTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187269103 11 - 187378091 tttaagatgtt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101162930 11 + 101219884 TTTAAGATGTT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75510064 11 +  98207768 TTGAAGATGTT
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11108348 11 +  39895921 TTTAAGATATT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=1888740.000000
s hg38.chr14_KI270722v1_random        21738 709 +    194050  
s panTro4.chr3                    125111222 714 - 202329955  
i panTro4.chr3                    I 6198 C 0
s ponAbe2.chr3                    159744421 714 - 202140232  
i ponAbe2.chr3                    C 0 I 949
s nomLeu3.chr21                    44099897 713 +  86207423  
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192459433 715 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192298002 715 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187269114 715 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101162941 713 + 101219884  
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75510075 684 +  98207768  
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11108359 675 +  39895921  
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=44938.000000
s hg38.chr14_KI270722v1_random        22447 16 +    194050 ttgtaagtctaaggaa
s panTro4.chr3                    125111936 16 - 202329955 tggtaagtctaaggaa
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746084 16 - 202140232 tggtaagtctaatgaa
i ponAbe2.chr3                    I 949 C 0
s nomLeu3.chr21                    44100610 16 +  86207423 tggtgagtctaaggaa
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460148 16 - 192599291 TGGTAAGTCTAAGGAA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192298717 16 + 192460366 TGGTAAGTCTAAGGAA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187269829 16 - 187378091 TGGTAAGTCTAAGGAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101163654 16 + 101219884 TGGTAAGTCTAAGGAA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75510759 14 +  98207768 --TTGCATTTAAAGAA
i mm10.chr16                      C 0 I 7604
s canFam3.chr31                    11109034 16 +  39895921 GAGTAAATCTCCAGAA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=708627.000000
s hg38.chr14_KI270722v1_random        22463 268 +    194050 actgattgggatgtacctaattcgagctgggaatatcagaagaaaaactttttgaaagtcatgagacatgagctatacctaaaagaATAAAAAATAGAGAGAGAAATAAGAATAAATAAATTAGGGAATGAGATGGGTATAATAGTAGAAAAAGGAAATCTCTTTAG-----------------ATAAAACAGGTTATGAGAGTATATAGG-AGGCTTATTAACTCAGTGTGGTTGGAGAAAACAGGTTGAAAGGAGAAATAGGAGAGAAAGTTACAAAGGGAATC
s panTro4.chr3                    125111952 286 - 202329955 actgattaggatatacctaattcaagctgggaatatcagaagaaaaactttttgaaagtcatgaggcatgagctgtgcctaaaagaATAAAAAATATAGAGAGAAATAAGAAGAAATAAATTAGGGAATGAGATGACTATACTAGTAGGAAAAGGAAATCTCTTCAGGTCAAGGGAGCTTAGAGATGAAACAGGGTATGAGAGTATACAGGGAGGCTCATTAACTCACTGAGGTTTGAGAAAACAGGTTGAAAGGAGAAATAGGGGAGAAAGTTACAAAGGGAATC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746100 286 - 202140232 actgattaggatatacctaattcaagctgggaatatcaaaagaaaaactttttgaaagtcatgagacatgagctgtgcctaaaagaataaaaaatatagagataaataagaagaaataaattaggggatgagatgagtataatcgtagaaaaaggaaatctctctaggtcaagggagcttagagatgaaacagggtatgagagtatatagggaggctcgttaactcagtgtggttggagaaaacaggttgaaaggagaaataggggagagagttacaaagggaatc
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44100626 282 +  86207423 actgattaggatgtacctaattcgagctgggaatatcacaagaaaaactttttgaaagtcatgagacatgagctgtgcctaaaagaATAAAAAATATAGGGAGAAATAACACGAAATAAATTAGGGAATGAGGTGAGTACAATAGTAGAAAAAGGAAATCTCTTTAGGTCAAGGGAGCTTAGAGATGAAAC--GGTGTGAGAGTACATAGAGAGGCTCATAAACTCAGTGTGGTTGGAGAAAACAGGCTGAAAGGAGAAAC--GGGAGAAAGTTACAAACGGAATC
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460164 286 - 192599291 ACGGATTAGGATGCACCTAATTCAAGCTGGGAATATCAGAAGAAAAGCTTTTTGAAAGTCACGAGACATGAGCTGTGCCTAAAAGAATAAAAAATATAGAGAGAAACAAAAAGAAATAAATTAGGGAATGAGATGCGTATAAGAGTAGAAAAAGGAGATCTCTTTAGGTCAAGGGCGCTGAGAGATGAAACAGGGTATGAGAGTATACAGGGAGACTCACTAACTCAGTGCGGTTGGAGAAAACGGGTTGAAAGGAGAAATAGGGGAGAAAGTTACAAAGGGAATC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192298733 286 + 192460366 ACGGATTAGGATGCACCTAATTCAAGCTAGGAATATCAGAAGAAAAGCTTTTTGAAAGTCACGAGACATGAGCTGTGCCTAAAAGAATAAAAAATATAGAGAGAAACAAAAAGAAATAAATTAGGGAATGAGATGCGTATAAGAGTAGAAAAAGGAGATCTCTTTAGGTCAAGGGCGCTGAGAGATGAAACAGGGTATGAGAGTATACAGGGAGACTCACTAACTCAGTGCGGTTGGAGAAAACGGGTTGAAAGGAGAAATAGGGGAGAAAGTTACAAAGGGAATC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187269845 286 - 187378091 ACGGATTAGGATGTACCTAATTCAAGCTGGGAATATCAGAAGAAAAGCTTTTTGAAAGTCACGAGACATGAGCTGTgcctaaaagaataaaaaatatagagagaaataaaaagaaataaattagggaatgagatgcgtataagagtagaaaaaGGAGATCTCTTTAGGTCAAGGGCGCTGAGAGATGAAACAGGGTATGAGAGTATACAGGGAGACTCACTAACTCAGTGTGGTTGGAGAAAACGGGTTGAAAGGAGAAATAGGGGAGAAAGTTACAAAGGGAATC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101163670 282 + 101219884 ACTGATTAGGATGTACCTAATTCAAGCTGGGAATATCAGAAGAAAAGCTTTTTGACAGTCACGAGACATGAACTGTGCCTAAAAGAATAAAAAATATAGAGAGAAATAAAAAGAAATAAATCAGGGAATGAGATGCGTATAAGAGTAGAAAA---AGATCTCTTTAGGTCAAGGGCGCTGAGAGATGAAACAGGGTATGAGAGTATACAGGGAGACTCACTAAC-CAGTGCGGTTGGAGAAAATGGGTTGAAAGGAGAAATAGGGGAGAAAGTTACAAAGGGAATC
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11109050 272 +  39895921 GTTCATCTACATATGCCTAATTCAGACTGAGAATATCAGAGAAAA----CTTTGAAAGTAGTTATAC-TACACTATGCCCAGAAGAATGAAAA--AAAAATAGAAATAAATAAAAGTAAATTAGAGGATGATATAGTTATGATGGTAGGTAAAGGATATCTCTTCAGGCCAA-GGAACTTGGAGATGAGAGAAGCCATGAGAACA------AAGATTCATTGCCTCACTAAGGTTGGAGAAAATGGTATGAAAGGAAAGGCAGGAATAAAGGCTATGAAGGAAATT
i canFam3.chr31                   C 0 I 279
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=10754.000000
s hg38.chr14_KI270722v1_random        22731 4 +    194050 AAAT
s panTro4.chr3                    125112238 4 - 202329955 AAAT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746386 4 - 202140232 aAAC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44100908 4 +  86207423 AAAT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460450 4 - 192599291 AAAC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192299019 4 + 192460366 AAAC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270131 4 - 187378091 AAAC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101163952 4 + 101219884 AAAC
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11109601 4 +  39895921 AAAT
i canFam3.chr31                   I 279 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18029572 1045 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=13816.000000
s hg38.chr14_KI270722v1_random        22735 7 +    194050 GTGTTAG
s panTro4.chr3                    125112242 7 - 202329955 GTGTTAG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746390 7 - 202140232 GTGTTAG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44100912 7 +  86207423 GTGTTAG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460454 7 - 192599291 GTGTTAG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192299023 7 + 192460366 GTGTTAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270135 7 - 187378091 GTGTTAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101163956 7 + 101219884 GTGTTAG
i chlSab2.chr22                   C 0 C 0
s otoGar3.GL873528                 18030617 5 -  38779656 GTCCT--
i otoGar3.GL873528                I 1045 I 4224
s canFam3.chr31                    11109605 4 +  39895921 GTGC---
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=262431.000000
s hg38.chr14_KI270722v1_random        22742 119 +    194050 TAGTTGAGG----GAAAAG-A-AAATATTGAATACGACCCATAGATCTTGGATAACCCAGTGTTTGGTAGTAGCTTACATA--AAAGGTTGTGACAA-----AATAACCAGAGGTATGCAGAGAAAATAATA
s panTro4.chr3                    125112249 117 - 202329955 TAGTTGAGG----GAAAAG-C-AAATATTGAATACGACCCACAGATCTTGGATAACCCAGCGTTTGGTAGCAGCTTACATA--AAAGGTTGTGACAA-----AATAACCAGAGATATACGGAGAAAATAA--
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746397 119 - 202140232 TAGTTGAGG----GAAAAG-C-AAATATTGAATACAACCCATAGATCTTGGATAACTCAGTGTTTGGTAGTAGCTTACATA--AAAGGTTGTGACAA-----AATAGCCAGAGATATACGGAGAAAATAATA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44100919 117 +  86207423 GAGTTGAGG----GAAAAG-C-AAATATTGAATACGACCCACAGATCTTGGATAACCCAGTGTTTGGTAGTAACTTACATG--AAAGGTTTTGACAA-----AATAGC--GGGATAGATGGAGAAAATAATA
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460461 120 - 192599291 GAGTTGGGG----GAAAAG-C-AAACATTGAAGATGACCCACAGATCTTGGATAACCCTGTGTTTGGTAGCAGCTTTTACGT-AAAGGTTGTGACAA-----AACAGCCAGAGACATACGGAGAAAACAATC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192299030 120 + 192460366 GAGTTGGGG----GAAAAG-C-AAACATTGAAGATGACCCACAGATCTTGGATAACCCTGTGTTTGGTAGCAGCTTTTACGT-AAAGGTTGTGACAA-----AACAGCCAGAGACATACGGAGAAAACAATC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270142 120 - 187378091 GAGTTGGGG----GAAAAG-C-AAACATTGAAGATGACCCACAGATCTTGGGTAACCCTGTGTTTGGTAGCAGCTTTTATGT-AAAAGGCGTGACAA-----AAGAGCCAGAGATATACGGAGAAAACAATC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101163963 121 + 101219884 GAGTTGGGG----GAAAAG-C-AAACATTGAAGATGACCCACAGCTCTTGGATAACCCAGTGTTTGGTAGCAGCTTTTACGTAAAAGGTTGTGACAA-----AATAGCCAGAGATATACGGAGAAGACAATC
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11109609 126 +  39895921 --ATTGGGGTACTGAAAAAAATCAATGTTGAGTATGACCCATAACTCTTGGATGAAACAGTGCCTGCTAGTAGTTTTCACA--AAATGT--TAACAAGTAATAATAGCCAAAGAGATAAAGAGATCATTATA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=271017.000000
s hg38.chr14_KI270722v1_random        22861 140 +    194050 ACTGAGTGTTATATTTTCTCTCAGTAGAAAC---CTAAAAAAAAAA-------------ATGTAATCACA-CCCTGATCTTTTAACTGACCTCCACTTTTCTTGATGCCTGGATTGGTATACATATTCCTCTGCCTGAAAAATTGCTCAACACTTTT
s panTro4.chr3                    125112366 139 - 202329955 -CTGAGTGTTATATTTCCTCTCAGTAGAAAC---CTAAAAAATAAC-------------GTGTAATCACA-GCCTGATCTTTTAACTGACCTCCACTTATCTTGCTGCCTGGATTGGCATACATATTCCTCTACCTGAAAAACTGCTCAACACTTTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746516 153 - 202140232 ACTGAGTGTTATATTTCCTCTCAGTAGAAAC---CTAAAAAAAAAAACAAAAAAAAAATGTGTAATCACA-ACCTGATCTTTTAACTGAACTCCACTTATCTTGCTGCCTGGATTGGCATACATATTCCTCTGCCTGAAAAACTGCTCAACACTTTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101036 140 +  86207423 ACTAAGTGTTATATTTC--CTCAGTAGAAACAAACAAACAAAAAAC-------------GTGTAATCACA-ACCTGATCTTTTAACTGGCCTCCACTTATCTTGCTGCCTGGATTGGCATACATATTCCGCTGCCTGAAAAG-TGCCCAACACGTTT
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460581 141 - 192599291 ACCGAGTGTTATATTTCCTCTCAGTAGAAAC---CTAAACAGAAAC-------------GTGTAATCACATACCTGAACTTTTAAGTGGCCTCCACCTACCTTGCTCCCCGGATTGGCATACATACTCCTCTGCCTGAAACACTGCTCTACACTTTT
i rheMac3.chr2                    C 0 I 7
s macFas5.chr2                    192299150 141 + 192460366 CCCGAGTGTTATATTTCCTCTCAGTAGAAAC---CTAAACACAAAC-------------GTGTAATCACATACCTGAACTTTTAAGTGGCCTCCACCTACCTTGCTCCCCGGATTGGCATACATACTCCTCTGCCTGAAACACTGCTCTACACTTTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270262 138 - 187378091 ACCGAGTGTTATATTTCCTCTCAGTAGAAAC---CTAAACACAAAC-------------GTGTAATCACATACCTGAACTTTTAAGTGGCCTCCACCTACCTTGCTCCCTGGATTGGCATACATACTCCTCTGCCTGAAACACTGCTCTACACT---
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101164084 138 + 101219884 ACCGAGTGTTATATTTCCTCTCCGTAGAAAC---CTAAACGCAAAC-------------GTGTAATCACATACCTGAACTTTTAAGTGGCCTCCACCTACCTTGCTCCCCGGATTGGCATACATCCTCCTCGGCCTGAAACACTGCTCTACACT---
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11109735   0 +  39895921 C
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=2238.000000
s hg38.chr14_KI270722v1_random        23001 4 +    194050 GAAA
s panTro4.chr3                    125112505 4 - 202329955 GAAA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746669 4 - 202140232 GAAA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101176 4 +  86207423 GAAA
i nomLeu3.chr21                   C 0 C 0
e micMur1.scaffold_3530               98689 2409 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11109735 0 +  39895921 C
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101164222 0 + 101219884 C
e papAnu2.chr2                    187270400 0 - 187378091 C
e macFas5.chr2                    192299291 0 + 192460366 C
e rheMac3.chr2                    192460722 7 - 192599291 I

a score=1325.000000
s hg38.chr14_KI270722v1_random        23005 4 +    194050 AGTT
s panTro4.chr3                    125112509 4 - 202329955 GGTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746673 4 - 202140232 GGTC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101180 4 +  86207423 GGTT
i nomLeu3.chr21                   C 0 C 0
s micMur1.scaffold_3530              101098 4 +    180192 CGTA
i micMur1.scaffold_3530           I 2409 I 16560
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11109735 0 +  39895921 C
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101164222 0 + 101219884 C
e papAnu2.chr2                    187270400 0 - 187378091 C
e macFas5.chr2                    192299291 0 + 192460366 C
e rheMac3.chr2                    192460722 7 - 192599291 I

a score=6613.000000
s hg38.chr14_KI270722v1_random        23009 6 +    194050 GTTTct
s panTro4.chr3                    125112513 6 - 202329955 GTTTCT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746677 6 - 202140232 ATTTct
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101184 6 +  86207423 GTTTCT
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192299291 2 + 192460366 ----CT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270400 5 - 187378091 -TTTCT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101164222 5 + 101219884 -TTTCT
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11109735 0 +  39895921 C
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192460722 7 - 192599291 I

a score=-4854.000000
s hg38.chr14_KI270722v1_random        23015 5 +    194050 cactg
s panTro4.chr3                    125112519 5 - 202329955 CACCA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746683 5 - 202140232 cactg
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101190 5 +  86207423 CACTA
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192299293 4 + 192460366 GCTG-
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187270405 4 - 187378091 CCCG-
i papAnu2.chr2                    C 0 I 1
s chlSab2.chr22                   101164227 4 + 101219884 CCCG-
i chlSab2.chr22                   C 0 I 1
s canFam3.chr31                    11109735 5 +  39895921 cccta
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192460722 7 - 192599291 I

a score=775597.000000
s hg38.chr14_KI270722v1_random        23020 292 +    194050 ttacacccaggcatttctgctaacaccagctgagttgtaAGGGGCCCTCCAGGAG-GCCTAGGTCGTTCTCCTTATCACATACATTATTTTCATTTATCAATTTACCCAGAACATCTAATGAAATA---TGGACACCAATAACATGAATACAAATATAGCTATAGACCCTA--AAAAGTAAATTGATGTCTCTTCAAAGGCTGTAATGTCTTAGATGCTAAATTTGGAGTATGTGTTTCTAATAAATAAATAGCTTGCTTTAATAATTCTGATTTATGAATGTAACATAGGGGAGCAG
s panTro4.chr3                    125112524 294 - 202329955 TTGCACCC-GGCATTTCTGCTAACACCAGCTGAGTTGTAAGGGGCCCTCCAGGAG-GCCTAGGTTGTTCTCCTTATCATATACATTATTTTCATTTATCAATTTACCCAGAACATCTAATGAAATACTATGGACACCAATAACATGAATACAAAGATAGCTATAGACACTA--AAAAGTAAATTGATGTCTCTTGAAAGGTTGTCATGTCTTAGACGCTAAATTTGGAGTATGTGTTTCTAATAAATAAATAGCTTGCTTTAATCATCCTTATTTATGAATGTAATATAGGGGAGCAC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746688 293 - 202140232 ttacacccaggcatttctgctaacaccagctgagttgtaATGGGCCCTCTAGGAG-GCCTAGGTTGTTCTCCTTATCATATACATTATTTTCATTTATCAATTTACCCAAAACATGTAATGAAATATTATGGACACCAATAAC--GAATACAAATATAGCTATGGACACTA--AAAAGTAAATTGATGTCTCTTGAAAGGCTGTCATGTCTTAGATGCTAAATTTGGAGTATGTGTTTCTAATAAATAAATAGCTTGCTTTAATCATTCTGATTTATGAATGTAATATAAGGGAGCAG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101195 293 +  86207423 TTACACCCAGGCATTCCTGCT-TCACCAGCTGAGTTGTAAGGGG-CCTCCAGGAG-GCCTAGATTGTTCTCCTTATCATATACATTATTTTCATTTATCGATTTGCCCAGAACATCTAATGAAATATTATGGACACCAATAACATGAATACAAACATAGCTATAGACACTA--AAAAGTAAATTGATGTCTTTTGAAAGGCTGTCATGTCTTAGATGCTAAATTTGGAATATGTGCTTCTAATAAATAAATAGCTTGCTTTAATCATTCTGGTTTATGAATATAATATAGGGGAGCAG
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192460729 295 - 192599291 TCACACCCAGGCATTTCTGCTAACACCAGCTGAGTTGTAAGGGGCCCTCCAGGAG-GCCTGGGTTGCTCTCCTTATCATATACATTATTTTCATTTATCAAGTTAGCCAGAACATCTAATGAAATATTATGGACACCAATAACATGAATACAAATACAGCTATAGACACTA--AAAAGTAAATTGATGTCTCTTGAAAGGCTGTCATGTCTTAGATGCTAAATTTGGAGTATGTGTTTCTAATAAGTAAATAGCTTGCTTTAATCATTTTGATTCATGAATGTAATATAGGGGAGCAG
i rheMac3.chr2                    I 7 C 0
s macFas5.chr2                    192299298 295 + 192460366 TCACACCCAGGCATTTCTGCTAACACCAGCTGAGTTGTAAGGGGCCCTCCAGGAG-GCCTGGGTTGCTCTCCTTATCATATACATTATTTTCATTTATCAAGTTAGCCAGAACATCTAATGAAATATTATGGACACCAATAACATGAATACAAATACAGCTATAGACACTA--AAAAGTAAATTGATGTCTCTTGAAAGGCTGTCATGTCTTAGATGCTAAATTTGGAGTATGTGTTTCTAATAAGTAAATAGCTTGCTTTAATCATTTTGATTCATGAATGTAATATAGGGGAGCAG
i macFas5.chr2                    I 1 C 0
s papAnu2.chr2                    187270410 291 - 187378091 TCACACCCAGGCATTTCTGCTAACACCAGCTGAGTTGTAAGGGGCCCTCCAGGAG-GCCTAGGTTGCTCTCCTtatcatatacattattttcatttatcaagTTAGCCAGAACATCTAATGAAATATTATGGACACCAATAACATGAATACAAATACAGCTATAGACACTA--AAAAGTAAATTGATGTCTCTTGAAAGGCTGTCATGTCTTAGATGCTAAATTTGGAGTATGTGTTTCTAA----TAAATAGCTTGCTTTAATCATTTTGATTCATGAATGTAATATAGGGGAGCAG
i papAnu2.chr2                    I 1 C 0
s chlSab2.chr22                   101164232 290 + 101219884 TCACACCCAGGCATGTCTGCTAACACCAGCTGAGTTGTAAGGGGCCCTCCAGGCG-GCCTGGGTTGTTCTCCTTATCATATACATTATTTTCATTTATCAAGTTACCCAGAACATCTAATGAAATATTATGGACACCAATAACATGAATACAAATACAGCTATAGACACTA--AAAAGTAAACTGATGTCTCTTGAAAGGCTGTCATGTCTTAGATGCTAAATTTGGAGTATGTGTTTCTAA----TAAGTAGCTTGCTTTAA-CATTTTGATTCATGAATGTAATATAGGGGAGCAG
i chlSab2.chr22                   I 1 C 0
s canFam3.chr31                    11109740 294 +  39895921 ttataccctgacacttctgccaatacc-gctgagttgta---ggtttactaacagcgcatactttattcctcattgtatatagactattttctgttatccctgtacatacaaaacttaattaaatattataaacaccaatgataagagtgcaaatatagatgtaaatgctatgaagatgaaattggtgccttTTCAAAGCTTGCCACGTCTTAGATGCTGAGTTTGGAGTACATGTTTCTAGTACGTGGATAGTTTGCTTTAATCATTCTGATTAGTGACTAAAATATCTGGGAGTCG
i canFam3.chr31                   C 0 I 7
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=79191.000000
s hg38.chr14_KI270722v1_random        23312 35 +    194050 CTTTTATTTCGCCCTTAATCTT-AAAaaacaattag
s panTro4.chr3                    125112818 35 - 202329955 CTTTGATTTTGCCCTTAATCTT-AAAaaacaattag
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159746981 36 - 202140232 CTTTGATTTTGCCCTTAACTTTAAAAaaacaattag
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101488 35 +  86207423 CTTTGATTTTGCCCTTAATCTT-AAAAAGCaattag
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192461024 35 - 192599291 CTTTGATTTTGCCCTTAATCTT-AAAAAGCaatgag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192299593 35 + 192460366 CTTTGATTTTGCCCTTAATCTT-AAAAAGCaatgag
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270701 35 - 187378091 CTTTGATTTTGCCCTTAATCTT-AAAAAgcaatgag
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101164522 35 + 101219884 CTTTGATTTTGCCCTTAATCTT-AAAAAACAATGAg
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11110034  7 +  39895921 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=47382.000000
s hg38.chr14_KI270722v1_random        23347 25 +    194050 ccgggtgtggtggcg----ggcacctgta---
s panTro4.chr3                    125112853 25 - 202329955 ccgggcatggtggca----ggcacctgta---
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747017 25 - 202140232 ccgggcatggtggtg----ggcacctgta---
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101523 24 +  86207423 ccaggcatggtggca-----gcacctgta---
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192461059 24 - 192599291 ccgggcgcggtggcg-----gcgcctgtg---
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192299628 24 + 192460366 ccgggcgcggtggcg-----gcgcctgtg---
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187270736 24 - 187378091 ccgggcgtggtggcg-----gcgcctgtg---
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101164557 24 + 101219884 ccgggcgtggtggcg-----gcgcctgta---
i chlSab2.chr22                   C 0 I 137
s canFam3.chr31                    11110041 32 +  39895921 ctgggtggcgcagcggtttggcacctgccttt
i canFam3.chr31                   I 7 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=54665.000000
s hg38.chr14_KI270722v1_random        23372 26 +    194050 gtccca------gctactcaggaggctgaagc-
s panTro4.chr3                    125112878 26 - 202329955 gtccca------gctactcaggaggctgaggc-
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747042 26 - 202140232 gtacca------gctacccaggaggctgaggc-
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101547 26 +  86207423 gtccca------gctactcaggaggctgaggc-
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192461083 26 - 192599291 gtccca------gctcctcgggaggcggaagc-
i rheMac3.chr2                    C 0 I 275
s macFas5.chr2                    192299652 26 + 192460366 gtccca------gctcctcgggaggcggaagc-
i macFas5.chr2                    C 0 I 54
s papAnu2.chr2                    187270760 26 - 187378091 gtccca------gctcctcgggaggctgaggc-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101164718 26 + 101219884 gtccca------gctcctcgggaggcagaagc-
i chlSab2.chr22                   I 137 C 0
s canFam3.chr31                    11110073 33 +  39895921 ggcccagggcgcgatcctggagacccagaatcc
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=22340.000000
s hg38.chr14_KI270722v1_random        23398 23 +    194050 agaaggatggt------------------gtgcacctggga
s panTro4.chr3                    125112904 23 - 202329955 aggagaatggt------------------gtgaacctggga
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747068 23 - 202140232 aggagaatggt------------------gtgaacctggga
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101573 23 +  86207423 aggagaatggt------------------gtgaatccggga
i nomLeu3.chr21                   C 0 C 0
s macFas5.chr2                    192299732 41 + 192460366 CGGGGAATGGCGGGAACCCggggaatggcgggaacccgggg
i macFas5.chr2                    I 54 C 0
s papAnu2.chr2                    187270786 25 - 187378091 aggagaatggcgg----------------ggaACCCCgggg
i papAnu2.chr2                    C 0 I 301
s chlSab2.chr22                   101164744 23 + 101219884 cggagaatggc------------------gggaacccgggg
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11110106 23 +  39895921 agtcccacgtc------------------gggctcccggtg
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192461109 275 - 192599291 I

a score=85267.000000
s hg38.chr14_KI270722v1_random        23421  78 +    194050 ggtggagcttgctgtaagccaaaattgtgccactgcactgcagcct-gagtgacagtgt-gagactctgt----ctcaaaaaaa--------------------------------------
s panTro4.chr3                    125112927  78 - 202329955 ggcggagcttgcagtaagccaaaattgcaccactgtactccagcct-gggtaaccgtgt-gagactctgt----ctcaaaaaaa--------------------------------------
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747091  81 - 202140232 ggtgaagcttgcagtgagccaaaatcgtgccactgcactccagcctggggtgacagtgtggagactccgt---cctcaaaaaaa--------------------------------------
i ponAbe2.chr3                    C 0 I 355
s nomLeu3.chr21                    44101596  78 +  86207423 ggtggagcttgcagtgagccaaaatcatgccactgcactccagcct-gggcgacagtgt-gagactccat----ctcaaaaaaa--------------------------------------
i nomLeu3.chr21                   C 0 I 6
s macFas5.chr2                    192299773  81 + 192460366 ggcggagcttgcagggagccaagatggcgcccct-cactccagcct-gggccacagagc-cagactccgtcccccccaaaaaag--------------------------------------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187271112  77 - 187378091 ggcggagcttgcagggagccaagatggcgccgct-cactccggcct-gggccacagagc-cagactccgt----cccaaaaaaa--------------------------------------
i papAnu2.chr2                    I 301 C 0
s chlSab2.chr22                   101164767  77 + 101219884 ggcggagcttgcagggagccaagatggcgccgct-cactccagcct-gggccgcagagc-cagactccgt----ctcaaaaaaa--------------------------------------
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11110129 116 +  39895921 catggagcctgcttctccctctgcctgtgtctctgcctctctctct-ctctctgtgtgt-gtgtgactat----cataaataaataaaaatttaaaaaataataataaaaaaattaaaaaaa
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192461109 275 - 192599291 I

a score=1239.000000
s hg38.chr14_KI270722v1_random        23499 2 +    194050 -aa
s panTro4.chr3                    125113005 2 - 202329955 -aa
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747527 2 - 202140232 -AA
i ponAbe2.chr3                    I 355 C 0
s nomLeu3.chr21                    44101680 2 +  86207423 -aa
i nomLeu3.chr21                   I 6 C 0
s macFas5.chr2                    192299854 2 + 192460366 -aa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187271189 2 - 187378091 -aa
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101164844 2 + 101219884 -aa
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11110245 2 +  39895921 ta-
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192461109 275 - 192599291 I

a score=401439.000000
s hg38.chr14_KI270722v1_random        23501 183 +    194050 ---------------------------------------------------------------------------------------------aaaaaaaaaaaGATCATACAAGGAGTAAATGATGATTTAGCATAAAACACAACTTGAGCCTAAAACACAGATCATAGGGCTCAAACTTTGTTATTTTATGGG----ATTATACTAACCAGTTAATATTCAAAATTTACCATTTCAAAAGAAGAAATATTGGTCTGGGAAAATTGCCATTGCTTATAC
s panTro4.chr3                    125113007 180 - 202329955 ---------------------------------------------------------------------------------------------aaaaaaaaaa---TCATACAAGGAGTAAATGATGATTTAGCATAAAACACAACTTTAGCCTAAAACACAGTTCATAGGACTCAAACTTTGTTATTTTATGGG----ATTATAGTAACCAGTTAATATTCAAAATTTACCATTTCAGAAGAAGAAATATTGGTCTGGGAAAATTGCCGTTGCTTGTAC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747529 182 - 202140232 ---------------------------------------------------------------------------------------------AAAAAAAAAAAAATCATACAAGGAGTAAATGATGATTTAGCATAAAACACAACTTTAGCATAAAACACAGTTCACAGGACTCAAACTTTGTTATTTTATGGG----ATTATACTAACCAGTTAATATTCAAAATTTA-CATTTCAAAAGAAGAAATATTGGTCTGGGAAAATTGCCATTGCTTATAC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101682 151 +  86207423 ---------------------------------------------------------------------------------------------aaaaaaaaaaaGATCATACAAGGAGTAAATGATGATTTAGCA------------------TAAAACACAGTTCATA-------------GTTATTTTATGGG-----TTATACTAACCAGTTAATATTCAAAATTTACCATTTCAAAAGAAGAAATATTGCTCTGGGAAAATTGCCATTGCTTATAC
i nomLeu3.chr21                   C 0 C 0
s rheMac3.chr2                    192461384 183 - 192599291 ---------------------------------------------------------------------------------------------aaaaaaagaaaaaTCATACAAGGAGTAAATGATGATTTAGCATAAAACACAACTTTAGCCAAAAACACAGTTCACAGGACTCAAACTTTCTTATTTTATGGG----ATTATACTAACCAGTTAATCTTCAAAATTTACCGTTTCAAAAGAAAAAATATTGGTCTTGGAAAACTGCCATTGCTTATAC
i rheMac3.chr2                    I 275 I 1
s macFas5.chr2                    192299856 173 + 192460366 -------------------------------------------------------------------------------------------------------aaaTCATACAAGGAGTAAATGATGATTTAGCATAAAACACAACTTTAGCCAAAAACACAGTTCACAGGACTCAAACTTTCTTATTTTATGGG----ATTATACTAACCAGTTAATCTTCAAAATTTACTGTTTCAAAAGAAAAAATATTGGTCTTGGAAAACTGCCATTGCTTATAC
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187271191 178 - 187378091 --------------------------------------------------------------------------------------------------aagaaaaatcatacgAGGAGTAAATTATGATTTAGCATAAAACACAACTTTAGCCAAAAACACAGTTCACAGGACTCaaactttcttattttatggG----ATTATACTAACCAGTTAATCTTCAAAATTTACcgtttcaaaagaagaaatattggTCTTGGAAAACTGCCATTGCTCATAC
i papAnu2.chr2                    C 0 I 1
s chlSab2.chr22                   101164846 179 + 101219884 -------------------------------------------------------------------------------------------------aaagaaaaaTCATACAAGGAGTAAATGATGATTTAGCATAAAACACAACTTTAGCCAAAAACACAGTTCACAGGACTCAAACTTTCTTATTTTATGGG----ATTAAACTAACCAGTTAATCTTCAAAATTTACCGTTTCAAAAGAAGAAATATTGGTCTTGGAAAACTGCCATTGCTTATAC
i chlSab2.chr22                   C 0 I 1
s canFam3.chr31                    11110247 278 +  39895921 aaaagaaaatttcataaataaataaataaataaataaataaataaataaataaataaTATCTGGGAGTGGCTTTACTCTTACCCTAAACTTAGAAAAAACAGAAGACCATATGAGAAGTGGACAGTGATGCAGAGT-CTGTACAACTTTAGCATAAAACACAACTCACTTAGGTCAAACTTTGTTATTTTAAGGGAGTAAGTAAACTAATCAGTCGATATTTAAATTTTACAATTTCAAAAACAG-AACATTGGACTAGGAAAGTTATTATTGTATGTAT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=196727.000000
s hg38.chr14_KI270722v1_random        23684 351 +    194050 AGAAGAATGGAGGAAGCTTTTTGAGAACGACAGTTCTAATGATCTTCCTCATCACTGGTTCAAAAACCAAGCCCATGGAAGGCCTGCATAGGGATAATGTGG-AGAACATGCAAAAGAAATACACATCACCAGCTCCTCAACTCAGAGCTCCAAGGGAATGGCTAAGGAAGCTGTATTGTCCTAAGAAATTTGAGACTGTTTTGACTTACAATAAATCCTGCTCAATCATATGTATGTATacacacacgcacacacacaca--cacacacacagacggtgttgtcagtgaagcctctaacaatgcatcttgactggacag-atttgacaattaaaatggctggaagaaaatagg-c
s panTro4.chr3                    125113187 354 - 202329955 AGAAGAATGGAGGAATCTTTTTGAGCACAACAATTCTAATGATATTCCTCATCACTGGTTCCAAAACCAAGCCCATGGAAGGCCTGCATAGGGATAATGTGG-AGAACATGCAAAAGAAATACACATCACCAGCTCCTCAACCCGGAGCTCCAAGGGAATGGCCAAGGAAGCTGTATTGTCCTAAGAAATTTGAGACTGTTTTGACTTACATTAAATCCTGCTCAATCATATGTATGTATacacacacacacacacatacagacacacatacagacGGTGTTGTCAGTGAAGCCTCTAACAATGCATCTTGACTGGACAG-ATTTGACAATTAAAATGGCTGGAAGAAAATAGGGC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159747711 352 - 202140232 AGAAGAATGGAGGAATCCTTTTGAGCACAACAATTCTAATGATATTCCTCATCACTGGTTCCAAAACCAAGCCCAAGGAAGGCCTGCATAGGGATAATGTGG-AGAACATGCAAAAGAAATACACATCACCAGCTCCTCAACCCAGAGCTCCAAGGGAATGGCCAAGGAAGCTGTATTGTCCTGAGAAACTTGAGACTGTTTTGACTTACATTAAATCCTGCTCAATCATACGTATGTATacacacacacacacacacaca--caaacacacaGACGGTGTTGTCAGTGAAGCCTCTAACAATGCATCTTGACTGGGCAG-ATTTGATAATTAAAATGGCTAGAAGAAAATTGGGC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21                    44101833 334 +  86207423 AGAAGAATGGAGGAATCTTTTTGAGCACAACAATTCTAATGATATTCCTCATCACTGGTTCCAAAACCAAGCCCAAGGAAGGCCTGTATAGGGATAACGTGT-AGAACACGCAAAAGAAATACACATCACCAGCTCCTCAAC-CAGAGCTCCAAGGGAATGGCCAAGGAAGCTGTATTGTCCTAAGAAATTTGAGGCTGTTTTGACTTACATTAAATCCTGCTCAATCATATGTATGTacacagacacacacacacacaca------cacacagacGGTGTCGTCAGTGAAGCCTCTA-------------ACTGGATAG-ATTTTACAATTAAAATGACTGGAAGAAAATAGGGC
i nomLeu3.chr21                   C 0 N 0
s canFam3.chr31                    11110525 291 +  39895921 GGAAGAATGGAAGAAT-TTCCTGAGCATAGCAATTCTAATAA---TCTCCATCAGTGTTTGCCAAATGCAACAC-TGGAAAATCTGCATAAGTATAATTTGGAAGGACATGTGAAAGAAATACATAAGCCCAGCTCCCCAACCCAGAAACCTAGAAGAAAGGTCAAAATACTTA-------CTAA---------------------TCACA--AAATATTGAT-AGTTATCTGTCTATATCTATATAATGACAT-CAAAGA----------------------------AGGCCTCTAACTGTGCTTCCTGACTACCCAGAATTAGGCAATTAAAATGACTGGAAGGTAGTAGACC
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101165025   1 + 101219884 I
e papAnu2.chr2                    187271369   1 - 187378091 I
e macFas5.chr2                    192300029   1 + 192460366 I
e rheMac3.chr2                    192461567   1 - 192599291 I

a score=27358.000000
s hg38.chr14_KI270722v1_random        24035 35 +    194050 ttcataagtggcacttactattcacattacacatt
s panTro4.chr3                    125113541 35 - 202329955 TTCATAAGTGGCACTTACTATTCACATTACACATT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159748063 35 - 202140232 TTCATAAGTGGCACTTACTATTCACATTACACATT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random       402 35 +    139590 tTCATAAGTGGCCATTACTATTCACATTACACATT
i nomLeu3.chr21_GL397661_2_random N 0 C 0
s canFam3.chr31                    11110816 35 +  39895921 TTTACAAATGGCATTTACAATTCACATCACATATT
i canFam3.chr31                   C 0 I 398
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101165025  1 + 101219884 I
e papAnu2.chr2                    187271369  1 - 187378091 I
e macFas5.chr2                    192300029  1 + 192460366 I
e rheMac3.chr2                    192461567  1 - 192599291 I

a score=228688.000000
s hg38.chr14_KI270722v1_random        24070 376 +    194050 aaaaggacatctcctaaattaaatc--ttgtctatgataaaaaggcagaaaATCATGACCCAAGGCTCGT---TTATAACGGCAGAAATGTTCAAGATAGACCAATGCTTGCTATGTTTAGGAACTGACAATAAAGTACAGGTCTTTATAATCT---------------------------------------------ACCAT---------------------------------------------------------------------------TTTGCCTCATTTGACACCAGGTGACCTTCATAATGCAGGCAATAGAGAATTGCAAGATTTGTCAGAGATTTCAGGTCTTTGGAAAGCTATGCTCTTTCACAAGAACAGCCATGGAAACAGGAAGAAAGTCAATTCCCACTTAAGGTAATCAGAATTT-ACAAATATTCCTTTC-TTCATTGAAATCTCAATAGGCACTTCAATATTATATTTAATTAATTCTTT
s panTro4.chr3                    125113576 376 - 202329955 AAATGCACATCTCCTAAATTAAATC--TTGTCTATGATAAAAAGGCAGAAAATCATGACCCAAGGCTAGT---TTATAACTGCAGAAGTGTTCAAGACAGACCAATGCTTGCTATGTTTAGGAACTGACAAGAAAGTACAGGTCTTTATAATCT---------------------------------------------ACCAT---------------------------------------------------------------------------TTTGCCTCATTTGATACCAGGTGACCTTCATAACGCAGGCAATAGAGAATTGCAAGATTTGTCAGAGATTTCAGGTCTTTGGAAAGCTATCCTCTTTCACAAGAACAGCCATGGAAACAGGAAGAAAGTCAGTTCTCACTTAAGGTAATCAGAATTT-ACAAATATTCCTTTC-TTCATTGAAATCTCAATAGGCACTTCAATATTATCTTTAATTAATTCTTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159748098 372 - 202140232 AAAAGGACATCTCCTAAATTAAATC--TTGTCTACGATAAAAAGGCAGAAAATCATGATCCAAGGCTAGT---TTATAACTGCAGAAATGTTCAAGGCAGACCAATGCTTGCTATGTTCAGGAACTGAGAAGAAAGTACAGGTCTTCCTAATCT---------------------------------------------ACCAT---------------------------------------------------------------------------TTTGCCTGATTTGGTACCAGGTGACCTTCATAATGCAGGCAATAGAGAATTGCAAGATTTGTCAGAGATTTCAGGTCTTTGGAAAGCTGTGCTCTTTCACGGGAACAGCCAAGGAAACAGGAAGAAAGTCAATTCCCACTTAAGGTAATCAGAATTT-ACAAATATTCCTTTC-TTCATTGAAATCTTAATAGGCACTTCAATATTATCC----TTAATTCTTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random       437 375 +    139590 AAAAGGACATCTCCTAAATTAAATC--TTGTCTTTGATAAAAAGTCAGAAAATCATGACGCAAGGCTAGT---TTATAACTGCAGAAATGTTCAAGACCAACCAATGCTTGCTATGTTTCGGAACTGACAAGAAACTACACGTCTTTATAATCT---------------------------------------------ACCAT---------------------------------------------------------------------------TTTGCCTCATTTGATACCAGCTGACGTTCATAACGCAGGCAATATTGAATTGTGTGTTTTGTCAGAGATTTCAGGTCTTTGGAATGCTATGCTCTTTCACAAGTACAGCCATGG-AACAGGAAGAAAATCAATTCCCACTTAAGGTAATCAGAATTT-ACAAATATTCCTTTC-GTCACTGAAATCTCAATAAGCACTTCAATATTATGTTTAATTAATTCTTT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s canFam3.chr31                    11111249 494 +  39895921 aaAAGAACATTTCCCAAACTAAATATGTCTTCTACGATAAGTAGGCAGAAAATAATGACCCAAGTTTAGTCCATAATAACTGCAGAAATATTCAAGACAAACTAATGCCTGCTCTATTTAGGGGTTAACAAGACAGTACATATTTTTTTAATCTTTTTTTTAAGTCAGCTCCAcacccaaagtgggccttgaactcacaaccctgagatcaaaagtcacatgctctaccaactaagccagctaggcAGCCCAAAAGTACCTGTTTTTGTAACATAAAAATTTGCCTCATTTGACACCAGGTGATCCTCATTTTTCA-GTACTAGAGAATACCAAGATATATCAGACATTCTACATTCCTGGGCAGCTGCAGCATTTCA---GAACAGTTATGTGAGAAGGAAGGAA-----TTCCCTCTTCAGGTGATCAGAATTTAACAAACACATCTTTCATTTGTTGAAATCCCGGTGGGCACTTCAGTACTATTATTTATTAATTCCTT
i canFam3.chr31                   I 398 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101165025   1 + 101219884 I
e papAnu2.chr2                    187271369   1 - 187378091 I
e macFas5.chr2                    192300029   1 + 192460366 I
e rheMac3.chr2                    192461567   1 - 192599291 I

a score=191820.000000
s hg38.chr14_KI270722v1_random        24446 386 +    194050 TGTTAcaatcatgcatcacataacaacattttggtcaaggatagtgcacatgtatgacagtggtgcagtaaaatcataacactgtacttttactgtacctcttgtatgtttagacatgtata----cacttactgtatagatataagtaagtatagatatacttaactgttgtgttacaattgcctacagtattcagtacagtaacatgctgcacaggtttgtagcctaggaggaataggctataccacctaagctaggcatgtaatcagctatagcatctaggtttgtgtaagtaaactctatgatgttcatacaataataaaattgtccagcaatgcatttctcagacacacccctgtcattaagtgacacatgactgTATTAGTTAA
s panTro4.chr3                    125113952 385 - 202329955 TGTTAcaatcatgcatcacataaca---ttttggtcaaggatggtgcacatatatgacactggtgcaataaaatcataac--tctatttttactgtacctcttgtatgtttagacatgtatagatacacttactgtatagatataagtaagcatagatatacttaactgttgtgttacaactgcctacagtattcagtacagtaacatgctgcacaggtttgtagcctaggaggaataggctataccacataacctaggtatgtaatcagctatagcatttaggtttgtgtaagtaaactctgccatgttcatacaataataaaattgtcgaggaatgcatttctcagacatacccctgtcattaagtgacacatgactgTATTAGTTAA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159748470 387 - 202140232 TGTTAcagtcatgcatcacgtaaca---ttttggtcaagaatggtgcacatatatgacagttgagcaataaaatcataacattgtatttttactgtacctcttctatgtttagacatgtatagatacacttactgtatagatataagtaagtatagatatacttaactgttgtgttacaattgcctacagtattcagtacagtaacatgctgcacaggtttgtagcctaggaggaataggctataccacataacctaggtatgtaatcagctatagcatctaggtttgtgtaagtaaactctgcgatgttcatacaataataaaattgtccaggaatgcatttctcagacatacccctgtcattaagtgacacatgactgTATTAGTTAA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random       812 390 +    139590 TGTTACAATAGtgcatcacataacaacattttggtcaaggatggtgcacatatatgtcagtggtgcaataaaatcataacgctgtatttttactgtacctattctatgcttagacatgtattgatacacttactctatagatataagtgagcatagatatacttaactgttgtgttacaattgcctacagtattcagtacagtaacatgctgcacaggtttgtaaccttggaggaataggctataccatatagcctaggtatgtaatcagctatagcatctaggtttgtgtaagtaaactctgtgatgttcatacaataataaaattgtccagcaatgcatttctcagacacatccctctcattaagtgacacatgactgTATTAGTTAA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11111743   0 +  39895921 C
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101165025   1 + 101219884 I
e papAnu2.chr2                    187271369   1 - 187378091 I
e macFas5.chr2                    192300029   1 + 192460366 I
e rheMac3.chr2                    192461567   1 - 192599291 I

a score=32885.000000
s hg38.chr14_KI270722v1_random        24832 56 +    194050 CACTATGGGAACTT--CATGGGAAATGAACACTGCAGCTCCACCATAAATAGAAACTG--------
s panTro4.chr3                    125114337 56 - 202329955 CACTGTGGGAACTT--CATGGGAAATGGACTCTGCAGCTCCATCATAAATAGAAACTG--------
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159748857 56 - 202140232 CACTGTGGGAACTT--CATGGGAAATGGACTCTGCCGCTCCATCATAAATAGAAACTG--------
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      1202 56 +    139590 CACTGTGGGAACTT--CATGGGAAATGGAAGCTACAGCTCCATTATAAGTAGAAACTG--------
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s canFam3.chr31                    11111743 66 +  39895921 CATTATGAGATATTACTATAGGAAATGGACACTATATCTCCATCACAATCAGAAAAAAAGGTCTTA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101165025  1 + 101219884 I
e papAnu2.chr2                    187271369  1 - 187378091 I
e macFas5.chr2                    192300029  1 + 192460366 I
e rheMac3.chr2                    192461567  1 - 192599291 I

a score=1453827.000000
s hg38.chr14_KI270722v1_random        24888 551 +    194050  
s panTro4.chr3                    125114393 551 - 202329955  
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159748913 551 - 202140232  
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      1258 546 +    139590  
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192461568 551 - 192599291  
i rheMac3.chr2                    I 1 C 0
s macFas5.chr2                    192300030 551 + 192460366  
i macFas5.chr2                    I 1 C 0
s papAnu2.chr2                    187271370 551 - 187378091  
i papAnu2.chr2                    I 1 C 0
s chlSab2.chr22                   101165026 551 + 101219884  
i chlSab2.chr22                   I 1 C 0
s canFam3.chr31                    11111809 539 +  39895921  
i canFam3.chr31                   C 0 I 343
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=455489.000000
s hg38.chr14_KI270722v1_random        25439 176 +    194050 TATTTATTACCTGGATTTGTGTTTTTGAGTGACCTTATCTATAGTTATGTGCTTCAGTGATCCAACTTGGGGTGGACTCCAAACTTTGATAA--ATTAAAGACCCTGCTTATTCCTTGAGTAATGCTACACTGACAACTGATTTAGTGAATGCCACTGTTAAAATAATAAACCTCTTG
s panTro4.chr3                    125114944 176 - 202329955 TATTTATAACCTGGATTTGTGCTTTTGAGTGACCTTATCTATAGTTATGTGTTTCAGTGATCTAACTTGGAGTGGACTCCAAACTTCGATAA--AGTAAAGACCCCGCTTATTCCTTGAGTACTGCTACACTGACAACTGATTTAGTGAATGCCACTGTGAAAATAATAAACCTCTTG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159749464 176 - 202140232 TATTTATAACCTGGATTTGTGCTTTTGAGTGATCTTATCTATAGTTATGTGTTTCAGTGATCTAACTTGGGGTGGACTCCAAACTTTGATAA--AGTAAAGACCCTGCTTATTCCTTGAGTATTGCTACACTGACAACTGATTTAGTGAATGCCACTGTGAAAATAATAAACCTCTTG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      1804 175 +    139590 TATTTATAACCTGGATTTGTGTTTTTGAGTGACCTTATCTATAGTTATGTGCTTCAGTGATCCAATTTGGGGTTGACTCCAAACTTTGATAA--TGTAGAGACCCTG-TTATTCCTTGAGTATTGCTACACTGACAACTGATTTAGTGAATGCCACTGTGAGAATAATAAACCTCTTG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192462119 178 - 192599291 TATTTATAACCTAGATTTGTGCTTTTGAGTGACCTTATCTATAGTTATGTGCTTCAGTGATCTAAATTGGGATTGACTCCAAACTTTGATAAAGAGTTTATTCCCTGCTTATTCCTTGATTATTGTTACATCGATAACTGATGTAGTGAATGCCACTGTGAAAATAATAAACCTCTTG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192300581 178 + 192460366 TATTTATAACCTAGAtttgtgcttttgagtgaccttatctatagttatgtgcttcagtgatctaaattgggattgactccaaactttgataaagagtttattccctgcttattccttgattattgttacATCGATAACTGATGTAGTGAATGCCACTGTGAAAATAATAAACCTCTTG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187271921 178 - 187378091 TATTTATAACCTGGATTTGTGCTTTTGAGTGACCTTATCTATAGTTATGTGCTTCAGTGATCTAACTTGGGGTTGACTCCAAACTTTGATAAAGAGTTTATTCCCTGCTTATTCCTTGATTATTGTTACATCGATAACTGATGTAGTGAATGCCACTGTGAAAATAATAAACCTCTTG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101165577 178 + 101219884 TATTTATAACCTGGAtttgtccttttgagtgaccttatctatagttatgtgcttcagtgatctaacttggggttgactccaaactttgataaagagtttattccctgcttattccttgattattgttacATTGATAACTGATGTAGTGAATGCCACTGTGAAAATAATAAACCTCTTG
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11112691 173 +  39895921 TATTTATAAATTGGTCTTGTGCCTTGAAGTGCTCTTATTTATTGCTATATGTTCCAGTGAACTAACTTGTGGTTTACCCTAAGGTGGAGT----TGTTAAGACTTTGCTTATTTCTTGATTATTGTTATACCAGTAA-TGATTTACTGAATTTCACAGTAAGAATAATTAACTTCCTG
i canFam3.chr31                   I 343 I 7
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=24831.000000
s hg38.chr14_KI270722v1_random        25615 11 +    194050 GTGAATATATT
s panTro4.chr3                    125115120 11 - 202329955 GTGAATATGTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159749640 11 - 202140232 GTGAATATGTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      1979 11 +    139590 GTGAATATGTT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192462297 11 - 192599291 GTGAACATATT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192300759 11 + 192460366 GTGAACATATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187272099 11 - 187378091 GTGAACATATT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101165755 11 + 101219884 GTGAACATATT
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11112864  7 +  39895921 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=926708.000000
s hg38.chr14_KI270722v1_random        25626 342 +    194050 TAGACATGTCTTGTAACCTGTACACATCTTAACCGAGGATGTTACTTGGTCTTTCTATGTTCAGGAGTGTGTGGAGATAGAAAAACATACAGGATTGTAATTGTTTCCTGTGAGACTAACAGAAAATTCAAGCTAGTGAAGTATGTTTATGCATGGCACACTTCTCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTTGATATGTGTGTTACCTTGGAGAGAGAAAAAGAAACTCTGAACACAAGCATGAAATACTTTAGAATTTTATCTAGAGTTGGACTTGTCCAAAAGCTTTTGTATAAACTTGCTTGATGAGCAACTGTTGTCCAC
s panTro4.chr3                    125115131 342 - 202329955 TAGACATGTCTTGTAACCTGTACATATCTTAACCAGGGATGTTACTTGGTCTTTCTATGTACAGGAGTGTGTGGAGATAGAAAAACATACAGGATTGTAATTGTTGCCTGTGAGACTAATAGAAAATTCAAGCTAGTGAAGTATGTTTATGCATGGCACACTTCTCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTCGATATGTGGGTTACCTTGGAGAGAGAAAAAGAAACTCTGAACACAAGCATGAAATACGTTAGAATTTTATCTAGAGTTGGACTTCTCCCAAAGCTTTTGTATAAACTTGCTTGAGGAGCAACTGTTGTCCAC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159749651 342 - 202140232 TGGTCATGTCTTGTAATCTGTACACATCTTAACCAGGGATGTTACTTGCTCTTTCTATGTACAGGAGTGTGTGGAGATAGAACAACATATAGGATTGCAACTGTTGCCTGTGAGACTAATAGAAAATTCAAGCTAGTGAAGTATGTTTATGCATGGCACACTTCTCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTTGATATGTGGGTTACCTTGGAGAGAGAAAAAGAAACTCTGAACACAAGCATGAAATATTTTAGAATTTTATCTAGAGTTGGACTTGTCCCAAAGCTTTTGTATAAACTTGCTTGATGAGCAACTGTTGTCCAC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      1990 335 +    139590 TAGACATGTCTTGTAACCTGTACACATCTTAACCAGGGATGTTACTTGG----TCTATGTACAGGAGTGTGTGGAGATAGAACAACATACAGGATTGCAATTGTTGCCTGTGAGACTAATAGAATATTCAAGCTAGTGAAGTATGTTTATGCATGGCACACTTCTCACCAGTAATTTTAGGAAGTTCTACCCCAAACCC--ACGTCTTTTGATATGTGGGTTACCTTGGAGACAG-AAAAGAAACTCTGAACACAAGCATGAAATACTTTAGAATTTTATCTAGAGTTGGATTTGTCCCAAAGCTTTTGTATAAACTTGCTCGATGAGCAACTGTTGTCCAC
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192462308 341 - 192599291 TAGACATATCTTGTGACCTGCACACATCTTACCCAGGTATGGTACTTGGTCTTTCTATGAACAGGAGTGTGTGGCGATAGAACAACATACAGGATTGCAATTGTTGCCTGTGAGACCAACAG-AAATGCAAGCTAGTAAAGTATGTTTATGTGCGGCACGTTTCCCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTTGAGATGTGGGTTATCTTGGAGAGAGAAAAAGAAACTCTGAACACAAGCATGAAATACTTTACCATTTTATCTAGAGTTGGACTTGTCCCAAAGCTTTTGTATAAACTTACTTGATGAGCAACTATCGTCCAT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192300770 341 + 192460366 TAGACATATCTTGTGACCTGCACACATCTTACCCAGGTATGGTACTTGGTCTTTCTATGAACAGGAGTGTGTGGCGATAGAACAACATACAGGATTGCAATTGTTGCCTGTGAGACCAACAG-AAATGCAAGCTAGTAAAGTATGTTTATGTGCGGCACGTTTTCCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTTGAGATGTGGGTTATCTTGGAGAGAGAAAAAGAAACTCTGAACACAAGCATGAAATACTTTACCATTTTATCTAGAGTTGGACTTGTCCCAAAGCTTTTGTATAAACTTACTTGATGAGCAACTATCGTCCAT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187272110 342 - 187378091 TAGACATATCTTGTGACCTGCACACATCTTACCCAGGTATGGTACTTGGTCTTTCTATGAACAGGAGTGTGTGGCGATAGAACAACATACAGGATTGCAATTGTTGCCTGTGAGACCAACAGAAAATGCAAGCTAGTGAAGTATGTTTATGCGCGGCACGTTTCCCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTTGAGATGTGGGTTAtcttggagagagaaaaagaaactctgaACACAAGCATGAAATACTTTACCATTTTATCTAGAGTTGGACTTGTCCCAAAGCTTTTGTATAAACCTGCTTGATGAGCAACTATTGTCCAT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101165766 342 + 101219884 TAGACATATCTTGTGACCTGCACACATCTTACCCAGGTGTGGTACTTGGTCTTTCTATGAACAGGAGTGTGTGGCGATAGAACAACATACAGGATTGCAATTGTTGCCTTTGAGACCAACAGAAAATGCAAGCTAGTGAAGTATGTTTATGTGCGGCACGTTTCCCACCAGCAATTTTAGGAAGTTCTACCCACAACCCATATGTCTTTTGAGATGTGGGTTATCTTGGAGAGAGAAAAAGAAACTCTGAACACAAGCATGAAATACTTTACCATTTTATCTAGAGTTGGACTTGTCCCAAAGCTTTTGTATGAACTTGCTTGATGAGCAACTGTTGTCCAT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11112871 342 +  39895921 TAAACATATCTTGTAAACTAGACACATCTTAGCCAACTGTGTTCCTTAGTCTTGCTATGTATAAGAGTGGGTAGAAACAGAATGAACTGCACAGTTATAGTTTTTGCCCAAGAAGTTCATGGGAGATGCAGGCTACTGAGGTGTGCTTATGCATGAAACACTTCCCACCAGCAATTTTGGGAAGCTCTGACCACACCTCATTTATCTGTTGATATGTGGGTTACGTCTGAAACAGAGAAAGAAACTCTGAATGCAAGCATCAAATATTTTACAACGTTACCTAGAGCTGGACCTGTCCCAAAGCTTTTGCATAAACTTGCTTAATAAGCAATGGTTGTCCAT
i canFam3.chr31                   I 7 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75510773 7604 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=809220.000000
s hg38.chr14_KI270722v1_random        25968 295 +    194050 TGGTACCTTCACTGTACAATCCACACACAACCAAACTTCACAACT-GGACACCTAAATT----TGCACTT---------TGT--TTGGTAAAGTTGAATGAAAAATGTTGTCTTTTAAG-----CTTATGCTCTCTTATGAAAGCTATTATTAGAT---GAATTTTACTCCAAGATATGCCAGTTAAGAAATAACTTCCAATTTAATTTCACCAGCT-CCCTGTGGGTGGACTAATTAGTCATACATCACACTTACTCTGGTGG--TGAAATGCCTCAAAAGAAGGTCTCCAGAGTGTTGCTCTACCTAGAAGGACAAGAAG
s panTro4.chr3                    125115473 295 - 202329955 TGGTACCTTCACTGTACAATCCACACACAACCAAACTTTGCAACT-GGAGACCTAAATT----TGCACTT---------TGT--TTGGTAAAGTTGAATGAAAAATGTTGTCTTTTAAG-----CTTATGCTCTCTTATGAAAGCTGTTATTAGAT---TAATTTTAGTCCAAGATATGCCAGTTAGGAAACAACTTCCAATTTAATTTCACCAGCC-CCCTGTGGGTGGACTAATTAGTCATGCATCACACTTACTGTGGTGG--TGAAATGCCTCAAAGGAAGTTCTCCAGAGTGTTGCTCTACCTAGAAGGACATGAAT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159749993 295 - 202140232 TGGTACCTTCACTGTACAATCCACACACAACCAAACTTCACAACT-GGAGACCTAAATT----TGCACTT---------TGT--TTGGTAAAGTTGAATGAAAAATGTTGTCTTTTAAG-----CTTATGCTCTCTTATGAAAGCTGTTATTAGAT---TAATTTTACTCCAAGATATGCCAGTTAGGAAACAACTTCCAATTTAATTTCACCAGCC-CCCTGTGGGTAGATTAATTAGTCATGCATCACACTTACTCTGGTGG--TGAAATGCCTCAAAAGAAGGTCTCCAGAGTATTGCTCTATCTAGAAGGACATGAAT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      2325 294 +    139590 TGGTACCTTCACTGCACAATCCACAAACAACCAAACTTCACCACT-GGAGACCTAAATT----TGCACTT---------GGT--TTCGTAAAGTTGAATGAAAGATGTTGTCTTTTAAG-----CTTATGCTCTTTTATGAAAGCTGTTATTAGAT---TAATTTTACTCCAAGATATGCTAGTTAGGAAATAACTTCCTATTTAATTTCACCAGCC-CCCTGTGGGTGGACTAATTAGTCATTCATCACACTTATTCTGTTGG--TGAAATCCCTCAAAAGAAGGTCTCCAGAGTG-TGCTCTACCTAGAAGTACATGAAT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192462649 295 - 192599291 TGGTACCTTCACTGTACAATCCACACACAACCAAATTTCACAAAT-GCAGACCTAAATT----TGCACTT---------TGT--TTGGTAAAGTTGAATGAAAAATGTTGTCTTTTAAG-----CTTATGCTCGCTTATGAAAGCTGTTATTAGAT---TAATTTTACTCCAAGATATGCCAGTAAGGAAATAACTGCCAATTTAATTTCACCAGCC-CCCCGTGGGTAGACTAATTAATCATACATCACACTTATTCTGGTGG--AGAAATGCCTCAAAAGAAGGTCTCCAGAGTGTTGCCCTACCTAGAAGGACATGAAT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192301111 295 + 192460366 TGGTACCTTCACTGTACAATCCACACACAACCAAATTTCACAAAT-GCAGACCTAAATT----TGCACTT---------TGT--TTGGTAAAGTTGAATGAAAAATGTTGTCTTTTAAG-----CTTATGCTCGCTTATGAAAGCTGTTATTAGAT---TAATTTTACTCCAAGATATGCCAGTAAGGAAATAACTGCCAATTTAATTTCACCAGCC-CCCCGTGGGTGGACTAATTAATCATACATCACACTTATTCTGGTGG--AGAAATGCCTCAAAAGAAGGTCTCCAGAGTGTTGCCCTACCTAGAAGGACATGAAT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187272452 295 - 187378091 TGGTACCTTCACTGTACAATCCACACACAACCAAATTTCACAAAT-GCAGACCTAAATT----TGCACTT---------TGT--TTGGTAAAGTTGAATGAAAAATGTTGTCTTTTAAG-----CTTATGCTCGCTTATGAAAGCTGTTATTAGAT---TAATTTTACTCCAAGATATGCCAGTTAGGAAATAACTGCCAATTTAATTTCACCAGCC-CCCTGTGGGTGGACTAATTAATCatacatcacacttattctggTGG--AGAAATGCCTCAAAAGAAGGTCTCCAGAGTGTTGCCCTACCTAGAAGGACATGAAT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166108 293 + 101219884 TGGTACCTTCACTGTACAATCCACACACAACCAAATTTCACAAAT-GCAGACCTAAATT----TGCAC-----------TGT--TTGGTAAAGTTGAATTAAAAATGTTGTCTTTTAAG-----CTTATGCTCGCTTATGAAAGCTGTTATTAGAT---TAATTTTACTCCAAGATATGCCAGTAAGGAAATAACTGCCAATTTAATTTCACCAGCC-CCCCGTGGGTGGACTAATTAATCATACATCACACTTATTCTGGTGG--AGAAATGCCTCAAAAGAAGGTCTCCAGAGTGCTACCCTACCTAGAAGGACATGAAT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75518377 311 +  98207768 TAGCACATTTGCTCTAGAATTTACACAATATCACATTTCATATTCAGGAGATTCAGGTTACTGTGCGGTCAATTGTTCATAT--TTCataaaatt---taaaatctattttattttaaattattCTCTCTCTCTCTTTTCAAGACCTTAATTAAGAGTTTATTTTCATTCTAGGGTATAC-AACTAGGAAATCAGT-----CTTAATTTCATCATCTACTCTGAGAGTGGGGTAATTAACTGTATGTCACTTCTACATTGATAGGTAAGAGAGTCTCCAAAAAAGGTCCCCAGACTACTGCTCTATGAATAAAGACAGGAAT
i mm10.chr16                      I 7604 C 0
s canFam3.chr31                    11113213 261 +  39895921 TGGCACATTCACTGTACAAT---AACACTATCAAACTTCAAAACA-GGAGACCAGaatt----tatattt---------tatacttcataaaatttaataaaaac-----atttttaaG-----CTATACCTCTC---------------TTAAAA---TGCTTTTATTCCAGGATATT------------TTACTTCCAGTTAAATTTAACCAACG-CCCTGTAGGTGGGCTAATTAGTTATAAATTGCAGTTATATTGGTGG--CTATG-GTCTCACAAGAAATTCTTGAGAGTGTTGCTGCCCTTATAAGGACATGAAT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     37776 6346 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=3133.000000
s hg38.chr14_KI270722v1_random        26263 1 +    194050 G
s panTro4.chr3                    125115768 1 - 202329955 G
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159750288 1 - 202140232 G
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      2619 1 +    139590 G
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192462944 1 - 192599291 G
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192301406 1 + 192460366 G
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187272747 1 - 187378091 G
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166401 1 + 101219884 G
i chlSab2.chr22                   C 0 C 0
s tupBel1.scaffold_136731.1-86001     44122 1 +     86001 A
i tupBel1.scaffold_136731.1-86001 I 6346 I 5310
s mm10.chr16                       75518688 1 +  98207768 G
i mm10.chr16                      C 0 I 8
s canFam3.chr31                    11113474 1 +  39895921 A
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=106330.000000
s hg38.chr14_KI270722v1_random        26264 34 +    194050 --AAGAGACATAAAAATCATTCATTAAGAAG---GAAGA
s panTro4.chr3                    125115769 37 - 202329955 --AAGAGACGTAAAAATCATTCATTAAGAAGGAAGAAGA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159750289 34 - 202140232 --AAGAGACATAAAAATCATTCATTAAGAAG---GAAGA
i ponAbe2.chr3                    C 0 I 26886
s nomLeu3.chr21_GL397661_2_random      2620 34 +    139590 --AAGATACATAAAAATCATTCATTAAGAAG---GAAGA
i nomLeu3.chr21_GL397661_2_random C 0 I 3
s rheMac3.chr2                    192462945 34 - 192599291 --AAGAGACATAAAAATCATTCATTAAGAAG---GAAGA
i rheMac3.chr2                    C 0 I 3
s macFas5.chr2                    192301407 34 + 192460366 --AAGAGACATAAAAATCATTCATTAAGAAG---GAAGA
i macFas5.chr2                    C 0 I 3
s papAnu2.chr2                    187272748 34 - 187378091 --AAGAGACATAAAAATCATTCATTAAGAAG---GAAGA
i papAnu2.chr2                    C 0 I 3
s chlSab2.chr22                   101166402 34 + 101219884 --AAGAGACATAAAAATCATTCATTAAGAAG---GAAGA
i chlSab2.chr22                   C 0 I 3
s mm10.chr16                       75518697 35 +  98207768 --AAAAAAAAAAAAAATCATTCATCAAAAAA--AGATGA
i mm10.chr16                      I 8 I 1
s canFam3.chr31                    11113475 36 +  39895921 AAAATATTTCTACAAATCAATTATTAAGAAA---GAAGA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=949125.000000
s hg38.chr14_KI270722v1_random        26298 425 +    194050 -TTTTCCTTGCCTATATTTTCACTTGTAGGATCCAATTAATTTTATCACTTAATATTTTTTCCTGGTGGGCATTCATTTTACAAATTTGTAAGGTCAGTA-------GAA-ATGGAAACTTTTGGAAATCGAACTGTAAATGTTCTGTAGACATTGACAGA---AATAGCTATTTGGAGCTGTGCTTTTGCCAACTAGACGCTCTGAGAAAATCTGTGAGAGGATATTTTCAGGAAGTCATTGAACCCCCTAAAAATCAAG-TTTATTGCTTTTACCATAAATATAAATAATTAATTTATTATCAACCAC----TTTCA---ATATTCCAATAAGTAACCTTTATTGTTTATTTCATTGACATGATCTACATAGACACACAATTTATCTTCTTTTGCGATACATTCAGAAAATTTGCTGCCTGGAAAAGCCATGTTTTAAAATTA
s panTro4.chr3                    125115806 421 - 202329955 -TTTTCCTTGCCTAGATTTTCACTTGTAGGATCCAATTAATTTTATCACTTAATATTTTGTCGTGCTGGGCATTCATTTTACAAATTTGTAAGATCAGTA-------GAA-ATGGAAACTTTCGGAAATCAAACTGTAAATGTTCTGTAGATGTTGACGGA---AATAGCTATTTGGAGCTGTGCTTTTGCCAACTAGACACTCTGAGAAAATCTGTGAGAGGATATTTTCCAGAAGTCATTGAACCCACTAAAAATCAAG-TTTATTGCTTTTACCataaatataaataatttatttattatCAACCAC----TTTCA---ATATTCTAATAAGTAACCTTTA----TTATTTCATTGGCATGATCTACATAGACACATGATTTATCTTCTTTTGCGATACATTCAGAAAATTTGCTGCCTGGAAAAGCCATGTTTTGAAATTA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      2657 425 +    139590 -TTTTCCTTGCTTAGATTTTCACTTGTAGGATCCAATTTATTTTATCGCTTAATATTTTGTCCTGGTGGGCATTCATTTGACAAATTTGTAAGATCAGTA-------GAA-ATGGAAACTTTCGGAAATCGAACTGTAAATGTTCTGTGGACATTGACAGA---AACAGCTATTTGGAGCTGTGCTTTTGCCAACTAGACACTCTGAGAAAATCTGTGAGAGGATATTTTCAGGAAGTCATTGAACCTCCTAAAAATCAAG-TTTATTGCTTTTACCATAAATATAAATAATTTATTTATTATCAACCAC----TTTCG---ATATTCCCATAAGTAAACTTTATTGTTTGTTTCATTGGCATGATCTACATAAACACATGATTTACCTTCTTTCACGACACATTCATAAAATTTGCTGCCTGGAAAAGCCATGTTTTAAAATTA
i nomLeu3.chr21_GL397661_2_random I 3 C 0
s rheMac3.chr2                    192462982 423 - 192599291 -TTTTTCTTGCCTAGATTTTCACTTGTAGGATCCAATTAATTTTATCACTTAATATTTTGTCCTAGTGGGCATTCATTTTACAAATTTGTAAGGTCAGTA-------GAA-ATGGAAACTTTCAGAAGTGGAACTGTAAATGTTCTGTAGGCGTTGATAGA---AATCGCTATTTGGAGCTGTGCTTTTGCCAACTAGACA--CTGAGAAAATCTGTGAGAGGATATTTTCAGGAAGTCGTTGAACTCCCTAAAAATCAAG-TTTATGGCTTTTATCATAAACATAAATAATTTATTTATTATCAACCAC----TTTCA---ATATTCCAATAAGTAACCTTTATTGTTTATTTCATTGTCATGATCTACATAGACACATGATTTATCTTCTTTTGTGATACATTCAGAAAATTTGCTGCCTGGAAAAGCCATGTTTTAAAATTA
i rheMac3.chr2                    I 3 C 0
s macFas5.chr2                    192301444 423 + 192460366 -TTTTTCTTGCCTAGATTTTCACTTGTAGGATCCAATTAATTTTATCACTTAATATTTTGTCCTAGTGGGCATTCATTTTACAAATTTGTAAGGTCAGTA-------GAA-ATGGAAACTTTCAGAAGTGGAACTGTAAATGTTCTGTAGGCGTTGATAGA---AATCGCTATTTGGAGCTGTGCTTTTGCCAACTAGACA--CTGAGAAAATCTGTGAGAGGATATTTTCAGGAAGTCGTTGAACTCCCTAAAAATCAAG-TTTATGGCTTTTATCATAAATATAAATAATTTATTTATTATCAACCAC----TTTCA---ATATTCCAATAAGTAACCTTTATTGTTTATTTCATTGTCATGATCTACATAGACACATGATTTATCTTCTTTTGTGATACATTCAGAAAATTTGCTGCCTGGAAAAGCCATGTTTTAAAATTA
i macFas5.chr2                    I 3 C 0
s papAnu2.chr2                    187272785 423 - 187378091 -TTTTTCTTGCCTAGATTTTCACTTGTAGGATCCAATTAATTTTATCACTTAATATTTTGTCCTAGTGGGCATTCATTTGACAAATTTGTAAGGTCAGTA-------GAA-ATGGAAACTTTCAGAAGTGGAACTGTAAATGTTCTGTAGGCGTTGATAGA---AATCGCTATTTGGAGCTGTGCTTTTGCCAACTAGACA--CTGAGAAAATCTGTGAGAGGATATTTTCAGGAAGTCGTTGAACCCCCTAAAAATCAAG-TTTATGGCTtttatcataaatataaataatttatttattatcaacCAC----TTTCA---ATATTCCAATAAGTAAcctttattgtttatttcattgGCATGATCTACGTAGACACATGATTTATCTTCTTTTGTGATACATTCAGAAAATTTACTGCCTGGAAaagccatgttttaaaatta
i papAnu2.chr2                    I 3 C 0
s chlSab2.chr22                   101166439 423 + 101219884 -TTTTTCTTGCCTAGATTTTCACTTGTAGGATCCAATTAATTTTATCACTTAATATTTTGTCCTAGTGGGCATTCATTTTACAAATTTGTAAGGTCAGTA-------GAA-ATGGAAACTTTCAGAAGTGGAACTGTAAATGTTCTGTAGGCGTTAATAGA---AATCGCTATTTGGAGCTGTGCTTTTGCCAACTAGACA--CTGAGAAAATCTGTGAGAGGATATTTTCAGGAAGTCATTGAACCCCCTAAAAATCAAG-TTTATGGCTTTTATCATAAATATAAATAATTTATTTATTATCAACCAC----TTTCA---ATATTCCAATAAGTAACCTTTATTGTTTATTTCATTGGCATGATCTACATAGACACATGATTTATCTTCTTTTGTGATACATTCAGAAAATTTGCTGCCTGGAAAAGCCATGTTTTAAAATTA
i chlSab2.chr22                   I 3 C 0
s mm10.chr16                       75518733 392 +  98207768 -TTGTTCTGGCCTACATATTGACTCTTGCAATCCAATTCATTCTTTCCCTTGATATTTTAGCATGGTATGCACTTATTTTACAATTTTTCAAGAACAATG-------TAATGTAAAGAATGCTGAAAATGAAACCATG-----TTTATACCAATAACTGGA---AATACCAGTTTGAAGCTACGTTATGAACAATTTCACATCCTTAAAATATTTCT-----ATTTTTCTTAGGACGTCTGTGAACC---------TCGAGTTTTATTGC-TTTACCACAAATACAAATAATTTATCAACTCTCAACTAATGAGTTCCAAACATATTTCAA-----------AATTGCTTCCTTCGCTGTTATAATGTATGTACATCTGTAA---------TTCTGTGCACTATTCAGAAAA--CGCTGCCTAGCAAATTTATTTTATATAACCA
i mm10.chr16                      I 1 I 37
s canFam3.chr31                    11113511 427 +  39895921 ACTGAAGTGGCGTAGCTTTTCACTTGTAGGAACCAATTTATTTTACCATTTAATATTTTATCCTGATTGGTATTCATCTTATAAATTTGTAAGGAAGGCAACTTGCTGAA-ATG-----TGCTGAAAATGAAACTGTAAATGTCCT-TACACTTTGATGAAGGTAGTAGCTATTTGGGGCTGAGCTTTTGCCAGTGAGACACTCCTAGAAAATCCATTGGAAGATAGT-TCAAGAGGTCATTACACTCCTTAAAAATCAAG-ATTATTGCTTTTAACATAAGTATAAATAATTCATCCACTATCAACCAT----TTGTA---AGACTATAATACATAGCCTTCATGGCTTATTTCCATGGCATAACTTACATAAACAGGTGATCAATCAGCTCATGTGATACATTTAGAAAA--CGCTACCTGATAAAGTCACGTTTTGAAATGA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=30560.000000
s hg38.chr14_KI270722v1_random        26723 15 +    194050 CCACCTGTTTGATGA
s panTro4.chr3                    125116227 15 - 202329955 CCACCTGTTTGATGA
i panTro4.chr3                    C 0 I 1
s nomLeu3.chr21_GL397661_2_random      3082 15 +    139590 CCACCTGTTTGATGA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463405 15 - 192599291 CCACCTGTCTGATGA
i rheMac3.chr2                    C 0 I 14
s macFas5.chr2                    192301867 15 + 192460366 CCACCTGTCTGATGA
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187273208 15 - 187378091 ccacCTGTCTGatga
i papAnu2.chr2                    C 0 I 1
s chlSab2.chr22                   101166862 15 + 101219884 CCACCTGTCTGATGA
i chlSab2.chr22                   C 0 I 14
s canFam3.chr31                    11113938 15 +  39895921 CCTCCCACATGACCA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519125 37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=3798.000000
s hg38.chr14_KI270722v1_random        26738 9 +    194050 -Cttgttttt
s panTro4.chr3                    125116243 9 - 202329955 -tttcttttt
i panTro4.chr3                    I 1 C 0
s nomLeu3.chr21_GL397661_2_random      3097 9 +    139590 -tttcttttt
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192301883 8 + 192460366 -TTTCTTCT-
i macFas5.chr2                    I 1 I 5
s papAnu2.chr2                    187273224 8 - 187378091 -tttcttct-
i papAnu2.chr2                    I 1 I 5
s canFam3.chr31                    11113953 9 +  39895921 TTTTCTTAT-
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519125 37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101166877 14 + 101219884 I
e rheMac3.chr2                    192463420 14 - 192599291 I

a score=963.000000
s hg38.chr14_KI270722v1_random        26747  9 +    194050 ----gtactttaa-
s panTro4.chr3                    125116252  9 - 202329955 ----atactttaa-
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3106  9 +    139590 ----atactttaa-
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s canFam3.chr31                    11113962 14 +  39895921 AAAAACAACTTCAC
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519125 37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101166877 14 + 101219884 I
e papAnu2.chr2                    187273232  5 - 187378091 I
e macFas5.chr2                    192301891  5 + 192460366 I
e rheMac3.chr2                    192463420 14 - 192599291 I

a score=56928.000000
s hg38.chr14_KI270722v1_random        26756 228 +    194050 gttttagggcatatgtgcacaacctgcagtttagttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttagcattaggtatatgtcttaatgctatccctcccccct-cccccaccccacaacaggccctggtatgtgatgttccccttcctgtgtccatgtgttctcactgttcaattccca-cctatgagtgagaacatgcagtgttt
s panTro4.chr3                    125116261 229 - 202329955 gttttagggtacatgtgcacaacgtgcagtttagttacatatgtatacatgcgccatgttggtgtgctgcacccattaactcgtcatttggcattaggtatatctcctaatgctatccctcccccctccccccaccccacaacagtccccagtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattccca-cctatgagtgagaacatgcggtgttt
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3115 229 +    139590 gttttagggtacatgtgcacaatgtgcagtttagttacatatgtatacatgtgccatgttggtgtaccgcacccattaactcgtcatttagcattaggtaaatctcctaatgctatccctccccttc-cccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattccaaccctatgagtgagaacatgtggtgttt
i nomLeu3.chr21_GL397661_2_random C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11113976   0 +  39895921 C
e mm10.chr16                       75519125  37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e chlSab2.chr22                   101166877  14 + 101219884 I
e papAnu2.chr2                    187273232   5 - 187378091 I
e macFas5.chr2                    192301891   5 + 192460366 I
e rheMac3.chr2                    192463420  14 - 192599291 I

a score=38568.000000
s hg38.chr14_KI270722v1_random        26984 20 +    194050 catttCCACTTAAGTATCTA
s panTro4.chr3                    125116490 20 - 202329955 catttCCACTTAAGTATCTA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3344 20 +    139590 catttCCACTTAAGTATCTA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463434 20 - 192599291 CATTTCCACTTAAGTATCTA
i rheMac3.chr2                    I 14 C 0
s macFas5.chr2                    192301896 20 + 192460366 CATTTCCACTTAAGTATCTA
i macFas5.chr2                    I 5 C 0
s papAnu2.chr2                    187273237 20 - 187378091 catTTCCACTTAAGTATCTA
i papAnu2.chr2                    I 5 C 0
s chlSab2.chr22                   101166891 20 + 101219884 CATTTCCACTTAAATATCTA
i chlSab2.chr22                   I 14 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11113976  0 +  39895921 C
e mm10.chr16                       75519125 37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=23954.000000
s hg38.chr14_KI270722v1_random        27004 11 +    194050 TCTCTATTTGT
s panTro4.chr3                    125116510 11 - 202329955 TCTCTATTTGT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3364 11 +    139590 TCATTTTTTGT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463454 11 - 192599291 TCTCTATTTGT
i rheMac3.chr2                    C 0 M 71
s macFas5.chr2                    192301916 11 + 192460366 TCTCTATTTGT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273257 11 - 187378091 TCTCTATTTGT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166911 11 + 101219884 TCTCTATTTGT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11113976 11 +  39895921 TTTCTATTTGT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519125 37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=29659.000000
s hg38.chr14_KI270722v1_random        27015 18 +    194050 CCTTTATTTTCATTTCCA
s panTro4.chr3                    125116521 18 - 202329955 CTTTTATTTTCACTTCCA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3375 18 +    139590 CCTTTATTTTCACTTCCA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192301927 18 + 192460366 CCTTTATTTTCACTTCCA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273268 18 - 187378091 CCTTTATTTTCACTTCCA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166922 18 + 101219884 CCTTTATTTTCACTTCCA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11113987 18 +  39895921 TCCTCATTTTCATCTCTA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519125 37 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192463465 71 - 192599291 M

a score=56055.000000
s hg38.chr14_KI270722v1_random        27033 40 +    194050 TCCTAGCTCTATCCCTTGTCTCCTTTGTGTG------TCTCAGTAT
s panTro4.chr3                    125116539 40 - 202329955 TCCTAGCTGTATCCCTTGTCTCCTTCGTGTG------TCTTGGGAT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3393 40 +    139590 TCCTAGCTCTATCGCTTGTCTGCTTCGTGTG------TCTCAGGGT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192301945 40 + 192460366 TCCTAGCTCTATCCCTTGTCTCCTTCATGTG------TCTCAGGAT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273286 40 - 187378091 TCCTAGCTCTATCGCTTGTCTCCTTCATGTA------TCTCAGGAT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166940 40 + 101219884 TCCTAGCTCTATCCCTTGTCTCCTTTATGTG------TCTCAGGAT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75519162 46 +  98207768 TCCTGGTTCTGTTTATGATTTTCATCTTTTGTGCTCATCTCAGTTC
i mm10.chr16                      I 37 I 5
s canFam3.chr31                    11114005 34 +  39895921 ------TTCCATCCTTTGCCTCTTGCCTGTT------CCTCATGAT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I
e rheMac3.chr2                    192463465 71 - 192599291 M

a score=9033.000000
s hg38.chr14_KI270722v1_random        27073 8 +    194050 AAGTGCC-G
s panTro4.chr3                    125116579 8 - 202329955 AAGTGCC-C
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3433 8 +    139590 AAGTGCC-C
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463536 8 - 192599291 AAGTGCC-C
i rheMac3.chr2                    M 71 C 0
s macFas5.chr2                    192301985 8 + 192460366 AAGTGCC-C
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273326 8 - 187378091 AAGTGCT-c
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166980 8 + 101219884 AAGTGCC-T
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75519213 8 +  98207768 TGATGTCA-
i mm10.chr16                      I 5 C 0
s canFam3.chr31                    11114039 8 +  39895921 CAGTGAC-C
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e saiBol1.JH378168                  2195686 12395 +  13128814 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=15282.000000
s hg38.chr14_KI270722v1_random        27081 4 +    194050 TATA
s panTro4.chr3                    125116587 4 - 202329955 TATA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3441 4 +    139590 TATA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463544 4 - 192599291 TATA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192301993 4 + 192460366 TATA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273334 4 - 187378091 tata
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166988 4 + 101219884 TATA
i chlSab2.chr22                   C 0 C 0
s saiBol1.JH378168                  2208081 4 +  13128814 TATA
i saiBol1.JH378168                I 12395 N 0
s mm10.chr16                       75519221 4 +  98207768 TATA
i mm10.chr16                      C 0 I 12
s canFam3.chr31                    11114047 4 +  39895921 TACA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=120780.000000
s hg38.chr14_KI270722v1_random        27085 56 +    194050 ACATTTTATATTTCTGGAAACCCTTCAATATAAAGTTATTACATGT-AAAAATAAAA----
s panTro4.chr3                    125116591 53 - 202329955 ACATTATATATTTCTGGAAACCCTTCAGTATAAAGTTATTACATGT-AAA---AAAA----
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3445 56 +    139590 ACATTATATATTTCTGGAAACCCTTCAATATAATGTTATTACATGT-AAAAATAAAA----
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463548 52 - 192599291 ACATTATATATTTCTGGAAATCCTTCAACATAAAGTTATTACATGT-AA----AAAA----
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192301997 52 + 192460366 ACATTATATATTTCTGGAAATCCTTCAACATAAAGTTATTACATGT-AA----AAAA----
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273338 53 - 187378091 acattatatatttctGGAAACCCTTCAACATAAAGTTATTACAtgtaaa----aaaa----
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101166992 52 + 101219884 ACATTATATATTTCTGGAAACCCTTCAACATAAAGTTATTACATGT-AA----AAAA----
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75519237 52 +  98207768 GAACTGCATATTCCCGGAAATCCATCACTATGAAAATATTACATGT-AG----AAAA----
i mm10.chr16                      I 12 C 0
s canFam3.chr31                    11114051 56 +  39895921 GCATGACGTACTTCTGGAAACCCTCCAACATAAAGATACTACATAA-AG----AAAAAAAA
i canFam3.chr31                   C 0 I 416
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=98095.000000
s hg38.chr14_KI270722v1_random        27141 62 +    194050 AGTCTGTTTTAGCCAACTTTTTCTTCACAAATTATATTTTCCTACTTCCCTA---TTAGACAATT
s panTro4.chr3                    125116644 62 - 202329955 AGTGTGTTTCAGCAAACTTTTTGTTCACAGATTATCTTTGCCTACTTGCCTA---TTAGACAATT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3501 62 +    139590 AGTCTGTTTTGGCAAACTTTTTGTTCACAGATTATCTTTAACTACTTCCCTA---TCAGACAATT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463600 62 - 192599291 AGTATGTTTTAGCAAACTTTTTGTTCACAGATTATCTTTGCCTGCTTACCTA---TTAGACAATT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302049 62 + 192460366 AGTATGTTTTAGCAAACTTTTTGTTCACAGATTATCTTTGCCTGCTTACCTA---TTAGACAATT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273391 62 - 187378091 agtatgttttagcAAACTTTTTGTTCGCAGATTATCTTTACCTGCTTACCTA---TTAGACAATT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167044 62 + 101219884 AGTATGTTTTAGCAAACTTTTTGTTCACAGATTATCTATGCCAGCTTGCCTA---TTAGACAATT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75519289 55 +  98207768 AATGTATCT--GCCAGATTCCTTCCTTCAGA-TATTTCTATCAACCCATCTAGGGTTA-------
i mm10.chr16                      C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e canFam3.chr31                    11114107 416 +  39895921 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=92378.000000
s hg38.chr14_KI270722v1_random        27203 38 +    194050 TTTGTAGGCTCCATATGCTATTAATTTACATTCACTTT
s panTro4.chr3                    125116706 38 - 202329955 TTTGTAGGCTCCATATGCTATTAATTTATATTCACTTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3563 38 +    139590 TTTGTAGGCTCCATATGCTATTAATTTATATTCACTTT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463662 38 - 192599291 TTTGTAGGCGCCATATGTTATTAATTTATATTTACTTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302111 38 + 192460366 TTTGTAGGCGCCATATGTTATTAATTTATATTTACTTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273453 38 - 187378091 TTTGTAGGCGCCATATgctattaatttatatttacttt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167106 38 + 101219884 TTTGTAGGTGCCATATGCTATTAATTTATATTTACTTT
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75519344 38 +  98207768 CTTATAGGTCCTATATGTAATTAATTTAAAATCATCTT
i mm10.chr16                      C 0 I 2039
s canFam3.chr31                    11114523 38 +  39895921 ccgggctgcccTATATGCTCTTAATTTATATATACTTT
i canFam3.chr31                   I 416 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=95309.000000
s hg38.chr14_KI270722v1_random        27241 49 +    194050 TAGAAGAATTTTCATCAAAAGCAAAAGTATTAGGTAAATT-GATTGTATG
s panTro4.chr3                    125116744 49 - 202329955 TAGAAGAATTTTCATCAAAAGCAAACGTCTTATGTCAATT-GATTATATG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3601 49 +    139590 TAGAAGAATTTTCATCAAAAGCAAAAGTCTTATGTAAATT-GATTTTATG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463700 49 - 192599291 TAGAAGAATTTTCATCAAAAGCAAAAGTCTTATGTAAATT-GATTATGTG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302149 49 + 192460366 TAGAAGAATTTTCATCAAAAGCAAAAGTCTTATGTAAATT-GATTATGTG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273491 49 - 187378091 tagaaGAATTTTCATCAAAAGCAAAAGTCTTATGTAAATG-GATTGTATG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167144 49 + 101219884 TAGAAGAATTTTCATCAAAAGCAAAAGTCTTATGTAAATT-GATTATATG
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11114561 49 +  39895921 TAGAGGAATTTTCTGCCAAA-TGAAAGCCTTGTAGGATTTAAATTATATG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_3530              101102 16560 +    180192 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519382 2039 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=12998.000000
s hg38.chr14_KI270722v1_random        27290 11 +    194050 CTATTTATA----------CT
s panTro4.chr3                    125116793 11 - 202329955 CTATTTGTA----------TT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3650 11 +    139590 Ctatttata----------tg
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463749 21 - 192599291 CTATTTGTACTGCATAGTGCT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302198 21 + 192460366 TTATTTGTACTGCATAGTGCT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273540 21 - 187378091 CTGTTTGTACTGCATAGTGTt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167193 21 + 101219884 CTATTTGTACTGCATAGTGCT
i chlSab2.chr22                   C 0 C 0
s micMur1.scaffold_84608               4587 11 +      5045 TTATTGTTACT----------
i micMur1.scaffold_84608          n 16560 n 16560
s canFam3.chr31                    11114610 21 +  39895921 CTATTGTAACTATATAGTGCT
i canFam3.chr31                   C 0 C 0
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519382 2039 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=68577.000000
s hg38.chr14_KI270722v1_random        27301 43 +    194050 TCTATGTATATATACACA---CATAGCCACATACATATATGTAACT-------------------------
s panTro4.chr3                    125116804 43 - 202329955 TCTATGTATATATACACA---TAGAGCCACATGCATATATGTAACT-------------------------
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3661 43 +    139590 tctatgtatatatacaca---catatccacatacatatatGGAACT-------------------------
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463770 43 - 192599291 TCTATGTATATATACACA---CATAGCCACATACATATATGTAACT-------------------------
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302219 43 + 192460366 TCTATGTATATATACACA---CATAGCCACATACATATATGTAACT-------------------------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273561 43 - 187378091 tctatgtatacatacaca---catagccacatacatatatgtaact-------------------------
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167214 43 + 101219884 TCTATGTatacatacaca---catagccacatacatatatGTAACT-------------------------
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11114631 69 +  39895921 TTCATTTTTAT-TTCACAATTCATAAGCTAAAGCAATTAT-TAACCAGTTGACAGGATTTATGCTATAAGT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519382 2039 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=11490.000000
s hg38.chr14_KI270722v1_random        27344 6 +    194050 CCAGAG
s panTro4.chr3                    125116847 6 - 202329955 CCGGAG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3704 6 +    139590 CTAGAG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463813 6 - 192599291 CTGGAG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302262 6 + 192460366 CTGGAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273604 6 - 187378091 CTGGAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167257 6 + 101219884 CTGGAG
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE928251v1                   2369 6 +     87482 GTAAGG
i tarSyr2.KE928251v1              N 0 I 8936
s canFam3.chr31                    11114700 6 +  39895921 CCAAAG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519382 2039 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=308532.000000
s hg38.chr14_KI270722v1_random        27350 165 +    194050 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAATAACTGTATTGAACAAGAGCAAGAAAAAGCTATTCAAATTTCAAACAACAAGTTGAACTGATGACCTCACATCTTTGAATGAAATAGACACTAG-TAGCCTTTAAAAATTAAACATTTCTACTGTTTTAAAAAATTATAGCCATCAT
s panTro4.chr3                    125116853 165 - 202329955 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAATAACTGTATTGAACAAGAGCAAGAAAAAGCTGTTCAAATTTCAAACAACAAGTTGAACTGAAGAGCTCACATCTTTCAATAAAATAGACACTAG-CAGCCTTTAAAAATTAAACATTTCTACTGTTTTAAAAAATTATAGCCATCAT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3710 162 +    139590 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAACAACTGTATTGAACAAGAGCAAGAAAAAGCTGTTCAAACTTCA---AACAAGTTGAACTGAAGAGCTCACATCTTTGAATAAAATAGACACTAG-CAGCCTTTAAAAATTAAACATTTCTACTGTTTTAAAAAATTATAGCCATCAT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463819 164 - 192599291 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAATAAATGTACTGAACAAGAGCAAG-AAAAGCTGCTCAAATTTCAAACAACAAGTTGAACTGAAGAGTTCACAACTTTGAATAAAATAGACACTAG-CAGCTTTTAAAAATTAAACATTTCTACTGTTTTAAAAAATTAGAGCCATCAT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302268 164 + 192460366 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAATAAATGTACTGAACAAGAGCAAG-AAAAGCTGCTCAAATTTAAAACAACAAGTTGAACTGAAGAGTTCACAACTTTGAATAAAATAGACACTAG-CAGCTTTTAAAAATTAAACATTTCTACTGTTTTAAAAAATTATAGCCATCAT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273610 161 - 187378091 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAATAAATGTACTGAACAAGAGCAAG-AAAAGCTGCTCAAATTTCA---AACAAGTTGAACTGAAGAGTTCACAACTTTGAATAAAATAGACACtag-cagcttttaaaaattaaacatttctactgttttaaaaaattatagccatcat
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167263 161 + 101219884 --------------------GCCT----------------------------------------------------GCCTGGACTGTTTAATAAATGTACTGAACAAGAGCAAG-AAAAGCTGCTCAAATTTCA---AACAAGTTGAACTGAAGAGTTCACAACTTTGAATAAAATAGACACTAG-CAGCTTTTAAAAATTAAACATTTCTACTGTTTTAAAAAATTATAGCCATCAT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11114706 213 +  39895921 GCTGTTACAGAAAGGCATCTGCTTTATTTTGTCAAATTACTCTTTATATAATTTCATATATTTGGCAAAGTTGGAGGCTTGGACTGGTCAGTAACTATATTAAAAAGAAG-----AAAAGTTGCTCAAATTTCA-ACAACCAGCTTAATGAAGGAGCTGACCCCTTTGAATAAAACAGACACAAGATGGCCTTTAAAAATTAAACATGTTCACTGTTTC-------------------
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e mm10.chr16                       75519382 2039 +  98207768 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=13233.000000
s hg38.chr14_KI270722v1_random        27515 7 +    194050 AGTATGA
s panTro4.chr3                    125117018 7 - 202329955 AGTATGA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3872 7 +    139590 AGTATGA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463983 7 - 192599291 ATTATGA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302432 7 + 192460366 ATTATGA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273771 7 - 187378091 attatga
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167424 7 + 101219884 ATTATGA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75521421 7 +  98207768 AGTATAA
i mm10.chr16                      I 2039 I 2
s canFam3.chr31                    11114919 1 +  39895921 ------A
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18030622 4224 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=-9062.000000
s hg38.chr14_KI270722v1_random        27522 4 +    194050 GGAA--
s panTro4.chr3                    125117025 4 - 202329955 GGAA--
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3879 4 +    139590 GGAA--
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463990 3 - 192599291 GG-A--
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302439 3 + 192460366 GG-A--
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273778 3 - 187378091 gg-a--
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167431 3 + 101219884 GG-A--
i chlSab2.chr22                   C 0 C 0
s otoGar3.GL873528                 18034846 3 -  38779656 gc-a--
i otoGar3.GL873528                I 4224 I 8918
s mm10.chr16                       75521430 2 +  98207768 AG----
i mm10.chr16                      I 2 C 0
s canFam3.chr31                    11114920 4 +  39895921 --GAAA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=1561235.000000
s hg38.chr14_KI270722v1_random        27526 606 +    194050  
s panTro4.chr3                    125117029 606 - 202329955  
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      3883 598 +    139590  
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192463993 606 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192302442 606 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187273781 606 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101167434 606 + 101219884  
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75521432 561 +  98207768  
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11114924 617 +  39895921  
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=-143.000000
s hg38.chr14_KI270722v1_random        28132 1 +    194050 T
s panTro4.chr3                    125117635 1 - 202329955 G
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      4481 1 +    139590 G
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192464599 1 - 192599291 A
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192303048 1 + 192460366 A
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187274387 1 - 187378091 A
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101168040 1 + 101219884 A
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11115541 1 +  39895921 A
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e mm10.chr16                       75521993 0 +  98207768 C
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=132800.000000
s hg38.chr14_KI270722v1_random        28133 56 +    194050 TTACCACACAGTGCTTACTTCTTTCAGTCTT-TATTCATTTCTCT-CCTAATGGTCTC
s panTro4.chr3                    125117636 56 - 202329955 TTACCACACAGTGCTTACTTCTGTCCGTCTT-TATTCATTTCTCT-CCTAATGGTCAG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      4482 56 +    139590 TTACCACACAGTGCTTACTTCTTTCCATCTT-TATTCATTTCTCT-CCTTATGGTCTG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192464600 56 - 192599291 TTACCACACAGTGCTTACTTCTTTCAGTCTT-TATTCATTTCTCT-CCTAATGATCTG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192303049 56 + 192460366 TTACCACACAGTGCTTACTTCTTTCAGTCTT-TATTCATTTCTCT-CCTAATGATCTG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187274388 56 - 187378091 TTACCACACAGTGCTTACTTCTTTCAGTCTT-TATTCATTTCTCT-CCTAATGATCTG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101168041 56 + 101219884 TTACCACACAGTGCTTACTTCTTTCAGTCTT-TATTCATTTCTCT-CCTAATGATCTG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75521993 51 +  98207768 -TACAGCACAGAACTCA-----TTCAGTCTT-TTGTCTATTGTCTGAGTAGTGACCTC
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11115542 57 +  39895921 TTACCGCACAGTGCTTACCTCTTTCAATCTTCTATCTATTTCCCC-CCTAATGATCTG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122140249 19675 - 199944510 I

a score=7200.000000
s hg38.chr14_KI270722v1_random        28189 5 +    194050 TATGG-
s panTro4.chr3                    125117692 4 - 202329955 TATG--
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122159924 4 - 199944510 TATG--
i gorGor3.chr3                    I 19675 I 102
s nomLeu3.chr21_GL397661_2_random      4538 4 +    139590 TATG--
i nomLeu3.chr21_GL397661_2_random C 0 I 1
s rheMac3.chr2                    192464656 4 - 192599291 TATG--
i rheMac3.chr2                    C 0 I 1
s macFas5.chr2                    192303105 4 + 192460366 TATG--
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187274444 4 - 187378091 TATG--
i papAnu2.chr2                    C 0 I 1
s chlSab2.chr22                   101168097 4 + 101219884 TATG--
i chlSab2.chr22                   C 0 I 1
s mm10.chr16                       75522044 4 +  98207768 TATG--
i mm10.chr16                      C 0 I 1
s canFam3.chr31                    11115599 5 +  39895921 GATG-C
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I

a score=212900.000000
s hg38.chr14_KI270722v1_random        28194  97 +    194050 TAT----TA---TTACATAGTTCTAAAAACCTTCCATGAGGCGGAAATTTCATTTAATCATATAGCTTCAAAAATAATGAAAAACAGTAGAAACTTTC--TTTTTT
s panTro4.chr3                    125117696  97 - 202329955 --T----TA---TTACATAGTTCTAAAAATCTTCTATGAGGCAGAAATGTCATTTAATGATATAGCTTTGAAAATAATGAAAAACAGTAGAAACTTTCTATTTTTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      4543  99 +    139590 TAT----TA---TTACATAGTTTAAAAAATCTTTCATGAGGCAGAAATTTCATTTAATGATATAGCTTTGAAAATAATGAAAAACAGTAGAAACTTTCTATTTTTT
i nomLeu3.chr21_GL397661_2_random I 1 C 0
s rheMac3.chr2                    192464661  99 - 192599291 TAT----TA---TTACATAGTTCTAAAAATCTTCCATGAGGCAGAAATTTCACTTAATGATATAGCTTTGAAAATAATGAAAAACAGTAGAAACTTTCTATTTTGT
i rheMac3.chr2                    I 1 C 0
s macFas5.chr2                    192303110  99 + 192460366 TAT----TA---TTACATAGTTCTAAAAATCTTCCATGAGGCAGAAATTTCACTTAATGATATAGCTTTGAAAATAATGAAAAACAGTAGAAACTTTCTATTTTGT
i macFas5.chr2                    I 1 C 0
s papAnu2.chr2                    187274449  99 - 187378091 TAT----TA---TCACATAGTTCTAAAAATCTTCCATGAGGCAGAAATTTCACTTAATGATATagctttgaaaataatgaaaaacagtagaaactttctatttttt
i papAnu2.chr2                    I 1 C 0
s chlSab2.chr22                   101168102 103 + 101219884 TATTAAGTA---TTACATAGTTCTAAAAATCTTCCATGAGGCAGAAATTTCACTTAATGATATAGCTTTGAAAATAATGAAAAACAGTAGAAACTTTCTATTTTTT
i chlSab2.chr22                   I 1 C 0
s mm10.chr16                       75522049 100 +  98207768 TATGAAGTT---GTATATTCTTCTGGAAGTCCTTCAACAGGCAG-ATTACCATCTAGCTCTGTGGCCTTATGATTACAGAGAAATAATAGAATTGCCTAACTTT--
i mm10.chr16                      I 1 C 0
s canFam3.chr31                    11115604  97 +  39895921 TAT----TAAGTTTGCATATTTCTGGAAATCCTTCATGAGGCAGAAATTATATTTAATGATATTGTTTTGAAGATAATGAGAAAC---AGAAACTTTCTACTTT--
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122159928 102 - 199944510 I

a score=4095.000000
s hg38.chr14_KI270722v1_random        28291 1 +    194050 T
s panTro4.chr3                    125117793 1 - 202329955 T
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122160030 1 - 199944510 T
i gorGor3.chr3                    I 102 I 1233
s nomLeu3.chr21_GL397661_2_random      4642 1 +    139590 T
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192464760 1 - 192599291 T
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192303209 1 + 192460366 T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187274548 1 - 187378091 t
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101168205 1 + 101219884 T
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75522149 1 +  98207768 T
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11115701 1 +  39895921 T
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I

a score=932513.000000
s hg38.chr14_KI270722v1_random        28292 469 +    194050 ATGAAGCAGAATTGTTGAATTTTC--AGT-TTCATTTATTTAATATT-ACAAGATGACAAACATATTTCTTTAATTCCCTC----TTGTTATTTTTGTTTAACATCAACCAAAGCCATTTCTTTCATTTGAAGGTGAAAA--CTGCTCATCAAAATCCAGTTTAAGCTGAGAAAC------A------AAGAACTAAATTTTGCATGAGAGATTATACACTGCATAAGTATAAAACAGGACCAGAAACAATG---GTGGATTAGCAATTTTTAAAAAGACAAATGCAGGT---------TATCATCA-AATCAATTGTTACCAACACACCAATTGCACCTCTAGGCCAGAAAATTAGCCACTTACCCACGGGAAAACAATGATTGAAGACAAAGTTCACCAGTGAAAGTTGGTTA---TTTTTTTCCATCCTTGCATCAACTAACATGATATCTAC----AGTTCCTCTTAACACTTTTCTGAGTTTCAAATATGTGGGTATGCTTCATTA
s panTro4.chr3                    125117794 469 - 202329955 ATGAAGCAGAATTGTTGAATTTTCAAAGT-TTCATTTATGTAATGTT-ACAAGATGACAAATATATTTCTTTAATTCCCTC----TTGTTATTTTTGTCTAACATCAACCAAAGCCATTTCTTTCATTTGAAGGTGAAAA--CTGCTCATCAAAATCCAGTTTAAGCTGAGAAAC----------------AACCAAATTTTGCACGAGAAATTATACACTGCATAAGTATAAAACAGGACCAGAGACAACA---GTGGATTAGCAATTTTTAAAAAGACAAAAGCAGGT---------TATCATCA-AATCAATTGTTACCAACACACCAATTCCACCTCTAGGCCAGAAAATTAGCCACTTACCCTCAGGAAAACAATGATTGAAGACAAAGTTCACCAGTGAAAGTTGGTTA-TTTTTTTTTCCACCCTTGCATCAACTAAAATGACATCTAC----AGTTCCTCTTAACACTTTTCTTACTTTCAAATATGTGGGTATGCTTAATTA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      4643 473 +    139590 ATGAAGCAGAATTGTTGAATTTTCAAAGT-TTCATTTCTGTCATGCC-ACAAGATGACAAACGTATTTCTTTAATTCCCTC---GTTGTTATTTTTGTCTAACATCAACCGAAGCCATTTCTTTCATTTGAAGGTGAAAA--CTGCTCATCAAAATCCAGTTTAAGCTGAGAAAC------A------AAGAACTAAATTTTGCATGAGAGATTATACAGTGCATAAGCATAAAACAGGACCAGAAACAATG---GTGGATTGGCAATTTTTAAAAAGACAAAAGCAGGT---------TATCATCA-AATCAATTGTTACCAATACACTAATTCCACCTCTAGGCCAGAAAATTAGCCACTTACCCACAAGAAAACAATAATTGAAGACAAAGTTCACCAGTGAATGTTGGTTA--TTTTTTTTCCGTCCTTGCATCAACTAAAATGATATCTAC----AGTTCCTCTTAACACTTTTCTTACTGTCAAATATGTGGGCATGCTTAATTA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192464761 478 - 192599291 ATAAAACAGAATTGTTGAATTTTCAAAGT-TTTATTTATGTAATGTT-ACAAGATGACAAACTTATTTCTTTAATAGCCTC-TTGTTGTTATTTTGCTCTAACATCAACCAAAGCCATTTCTTTCATTTGAAGGTGAAAA--CTGCTCATCAAAAGCCAGTTTAAGCTGAGAAAC------AAAGG--AAGAACTAAATTTTACATGAGAGGTTATACACTGCATAAGTATAAAACAGGACCAGAAACAATG---GTGGATTAGCAATTTTTAAAAAGACAAAAGCACAT---------TATCATCA-AATCAATTGTTACCAACACACCAATTCCACCTCTACGCCAGTAAATTAGCCACTTATCTACAGGAAAACA---ACTGAAGATAAAGTTCACCAGTGAAAGCTGGTTATTTTTTTTTTCCATCCTCACATCCACTAAAATGATCTCTAC----GGTGCATCTTAACACTTTTCTTACTTTCAAATATGTCGGTATGCTTAATTA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192303210 478 + 192460366 ATAAAACAGAATTGTTGAATTTTCAAAGT-TTTATTTATGTAATGTT-ACAAGATGACAAACTTATTTCTTTAATAGCCTC-TTGTTGTTATTTTGCTCTAACATCAACCAAAGCCATTTCTTTCATTTGAAGGTGAAAA--CTGCTCATCAAAAGCCAGTTTAAGCTGAGAAAC------AAAGG--AAGAACTAAATTTTACATGACAGGTTATACACTGCATAAGTATAAAACAGGACCAGAAACAATG---GTGGATTAGCAATTTTTAAAAAGACAAAAGCACGT---------TATCATCA-AATCAATTGTTACCAACACACCAATTCCACCTCTACGCCAGAAAATTAGCCACTTATCTACAGGAAAACA---ACTGAAGATAAAGTTCACCAGTGAAAGCTGGTTATTTTTTTTTTCCATCCTCACATCCACTAAAATGATCTCTAC----GGTGCATCTTAACACTTTTCTTACTTTCAAATATGTCGGTATGCTTAATTA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187274549 478 - 187378091 ataaaacagaattGTTGAATTTTCAGAGT-TGAATTTATGTAATGTT-ACAAGATGACAAACTTATTTCTTTAATAGCCTC-TTGTTGTTATATTTCTGTAACATCAACCAaagccatttctttcatttgaagGTGAAAA--CTGCTCATCAAAAGCCTGTTTAAGCTGAGAAAC------AAAGG--AAGAACTAAATTTTACATGAGAGGTTATACACTGCATAAGTATAAAACAGGACCAGAAACAATG---GTGgattagcaatttttaaaaagacaaaagcatgT---------TATCATCA-AATCAATTGTTACCAACACACCAATTCCACCTCTACGCCAGAAAATTAGCCACTTACCTACAGGAAAACA---ACTGAAGATAAAGTTCACCATTGAAagctggttattttttttttccatccttacATCCACTAAAATGATCTCTAC----AGTGCATCTTAACACTTTTCTTACTTTCAAATATGTCGGTATGCTTAATTA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101168206 475 + 101219884 ATAAAACAGAATTGTTGAATTTTCAGAGT-TTTATTTATGTAATGTT-ACAAGATGACAAACTTATTTCTTTAATAGCCTC-TTGTTGTTATTTTTCTGTAACATCAACTAAAGCCATTTCTTTCATTTGAAGGTGAAAA--CTGCTCATCAAAAGCCAGTTTAAGCTGAGAAAC------AAAGG--AAGAACTAAATTTTACATGAGAGGTTATACACTGCATAAGTATAAAACAGGACCAGAAACAATG---GTGGATCAGCAATTTTTAAAAAGACAAAAGCACGT---------TATCATCA-AATCAATTGTTACCAACACACCAATTCCACCTCTACGCCAGAAAATTAGCCACTTACCTACAGGAAAACA---CCTGAAGACAAAGTTCACCAGCGAAAGCTGGTTA---TTTTTTTCCATCCTCACATCCACTAAAATGATCTCTAC----GGTGCATCTTAACACTTTTCTTACTTTCAAATATGTCGGTATGCTTAATTA
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75522150 428 +  98207768 GGAAAAGATAATTTTTAAATGTTCAAAGCATGAATATACAGCTTGCT-ACAAGATGGCAGATATTTTGCCATGCCTTTCTCTTTGCCGTCATTTTTTTTTGTC--CAAACA--------TTCTTCATAGAAAAGTGAGAATTCTGATCACCAAAATCAAACTTAAGGC-AGATATTTTTTAAAAAG--AGGAGCAAAGTAATATATGACAGCGAATACATTGCATAGGTAGGAA----GACCAGTAAAAATGAATGTAGTTCACAGTTTTTTAAAAAGGATAAA----------------ATTAGAA-TAGCAATCGTTTCTAATATG----------------------AACTTAACTGTCTACTCAGTGTAAAGAA-----------CAAAAATTACCAGCAAAACTTGGTTA---ATCTCTCCCA--CTTCCATCAGCTAAAATGGAATCT-------GTCTATGATAAC---CTTAATTCTTCCACAATTGTAGGAACATCTGAGGA
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11115702 481 +  39895921 -TAGAAGAGGATTGTTGAATTTTAAATGT-TTCATCAATATAATGATAATAAGATGACAGA----TCTCCTTATTTTCCTCTTTGTTGTTATTTCTGTCTAAGGTCAACCGAAACCCTTTCTTTCATTCAAAAGTAAGAGTGTTGTCCATAAAAATCCAATTTATGCCAGGAAAC------AAAAAGCCAGAATCAAATTGTATAGGAGAGATTATACAAGGTAGAGGT----TGCAGGAC---GTAAAAAG---GGGAATCAACA-----TAAAAAAAAAAAAAAAGACAAACTAGAATATTAACAGAATCATGCCTTACCACCACACCAATTCTCTTTCTATACCATGAGGTTAACCACTTACCCACAGGAAAACAACCACTGAGGACACAATTATCTGGTAAAAATTGGTTA---TTGTTATTCTTGCCTGCATCAATTAAAATGATATCTATAAAGAGTGCCTCTTATCACTTTTCATACTTTCAAATgcatgagtatgtctgatta
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e tupBel1.scaffold_136731.1-86001     44123 5310 +     86001 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I

a score=11418.000000
s hg38.chr14_KI270722v1_random        28761 4 +    194050 ACTG
s panTro4.chr3                    125118263 4 - 202329955 GCTG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5116 4 +    139590 GCTG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465239 4 - 192599291 GCTG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192303688 4 + 192460366 GCTG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275027 4 - 187378091 GCCG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101168681 4 + 101219884 GCTG
i chlSab2.chr22                   C 0 C 0
s tupBel1.scaffold_136731.1-86001     49433 4 +     86001 ACTA
i tupBel1.scaffold_136731.1-86001 I 5310 N 0
s mm10.chr16                       75522578 4 +  98207768 GCAG
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11116183 4 +  39895921 gctg
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I

a score=276557.000000
s hg38.chr14_KI270722v1_random        28765 135 +    194050 AGGTCATTTTCCATATGTACATCTGGCTACAAGGGAAACTGGGAATGTGAGCCCTGATCCTAATGTTTGTAGAGTATTTAGAAATTTGAGAATTCCCTCCAA-ATAAAGAGTT-TTTT-----AAAACATTGTTAGAAAAAA
s panTro4.chr3                    125118267 135 - 202329955 AGGCCATGTTTCATATGCACATCTGGCTACAAGGGAAACTGGGAATGTGAGCCCTGATCCTAATGTTTGTAGAGTATTTAGAAATTTGAGAATTCCCTCCAA-ATAAAGAGTT-TTTT-----AAAACACTGTTAGACAAAA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5120 135 +    139590 AGGCCATGTTTCATATGCACATCTGGCTACAAGAGAAACTGGGAATTTGAGCCCTGATCCTAATGTTTGTAGAGTATTTATAAATTTGAGAATTCCCTCCAA-ATAAAGAGTT-TTTT-----AAAACATCGTTAGACAAAA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465243 135 - 192599291 AGGCCATGTTTCATATGCACATCCGGTTACAAGGGAACCTGGGAATTTGAGCCCTGATCCTAATGTTCGCAGAGTATTTAGAAATTTGAGAATTCCCTCCAA-ATAAAGAGTTTTTTT-----TAAACATTGTTAGAC-AAA
i rheMac3.chr2                    C 0 I 1
s macFas5.chr2                    192303692 136 + 192460366 AGGCCATGTTTCATATGCACATCCGGTTACAAGGAAACCTGGGAATTTGAGCCCTGATCCTAATGTTCGCAGAGTATTTAGAAATTTGAGAATTCCCTCCAA-ATAAAGAGTTTTTTT-----TAAACATTGTTAGACAAAA
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187275031 136 - 187378091 AGGCCATGTTTCATATGCATATCCGGCTACAAGGGAAACTGGGAATTTGAGCCCTGATCCTAATGTTCACAGAGTATTTAGAAATTTGAGAATTCCCTCCAA-ataaagagttatttt-----taaacattgttagACAAAA
i papAnu2.chr2                    C 0 I 1
s chlSab2.chr22                   101168685 136 + 101219884 AGACCATGTTTCATATGCACATCCGGCTACAAGGGAAACTGGGAATTTGAGCCCTGATCCTAATGTTCGCAGAGTATTTAGAAATTTGAGAATTCCTTCCAA-ATAAAGAGTTTTTTT-----AAAACATTGTTAGACAAAA
i chlSab2.chr22                   C 0 I 1
s mm10.chr16                       75522582 132 +  98207768 AGCTTACATTTCACATGCATACTTAGCTATGAGGAAAATTAAGAATGCATTCCTTTGTCCTAGATATTTCAGACACATTCAGAATTTGGAAGT---CTCCAA-ATATAGAGATTTTTTTCCCCTAAATTTTAT------AAA
i mm10.chr16                      C 0 I 3
s canFam3.chr31                    11116187 133 +  39895921 aacctaagattcaagtgcacatctgcctacaaaggaaatagaggatttgagccttgcttc---attttacagaggaattcacagcttgggaaatttcttaaatagagagaggt-tttt-----caaaagatgagagacagaa
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I

a score=422.000000
s hg38.chr14_KI270722v1_random        28900 1 +    194050 A
s panTro4.chr3                    125118402 1 - 202329955 A
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5255 1 +    139590 A
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s mm10.chr16                       75522717 1 +  98207768 G
i mm10.chr16                      I 3 C 0
s canFam3.chr31                    11116320 1 +  39895921 a
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I
e chlSab2.chr22                   101168821 1 + 101219884 I
e papAnu2.chr2                    187275167 1 - 187378091 I
e macFas5.chr2                    192303828 1 + 192460366 I
e rheMac3.chr2                    192465378 1 - 192599291 I

a score=146673.000000
s hg38.chr14_KI270722v1_random        28901 68 +    194050 GTTTGAATTACAA-AATGCGATAGTAGCTCAGGT----CTAAGTCAAATGCAGGGAAAAAAACTGTTAACTCT
s panTro4.chr3                    125118403 68 - 202329955 GTTTGAATTACAA-AATGTGGTGGTAGCTCATGT----CTAACTCAAATGCAGGGAAAAAAACTATAAACTCT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5256 68 +    139590 GTTTGAGTTACAA-AATGTGGTAGTAGCTCATGT----CTAACACAAACGCAGGGAGAAAAACTATAAACTCT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465379 68 - 192599291 GTTTGAATTACAA-AATGTGGTAGTAGCTCATGT----CTAACTCAAATGCAGAGGAAAAAAACATAAACTCT
i rheMac3.chr2                    I 1 C 0
s macFas5.chr2                    192303829 68 + 192460366 GTTTGAATTACAA-AATGTGGTAGTAGCTCATGT----CTAACTCAAATGCAGAGGAAAAAAACATAAACTCT
i macFas5.chr2                    I 1 C 0
s papAnu2.chr2                    187275168 68 - 187378091 GTTTGAATTACAA-AATGTGGTAGTAGCTCATGT----CTAACTCAAatgcagaggaaaaaaacataaactct
i papAnu2.chr2                    I 1 C 0
s chlSab2.chr22                   101168822 68 + 101219884 GTTTGAATTACAA-AATATGGTAGTAGCTCATGT----CTAACTCAAATGCAGAGGAAAAAAACATAAACTCT
i chlSab2.chr22                   I 1 C 0
s mm10.chr16                       75522718 66 +  98207768 GTTTCAATCATAA-ATTGACAGAGTAGTCCAAAT----TCA--TTGATTTCAAAGGCAAAAACCAAGACCTCA
i mm10.chr16                      C 0 C 0
s canFam3.chr31                    11116321 72 +  39895921 gTTTACATTACAATGATGTGCTAGCAGCTCACATCTGACTAACCCAAATGCAGAGG-AAAAATTATAAACTCT
i canFam3.chr31                   C 0 I 221
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I

a score=749683.000000
s hg38.chr14_KI270722v1_random        28969 364 +    194050 ---AAAA--AAA-ATTAAATACACATTTGATGCCAATGAGAAACAGAAAACAGGCAGAAATAGTAGAATATTCAACCACTGATGAAG-TATTTGACCATTGAATAAAGAAAATTGCAATGATTTAAATTTGCATCAATGCAACTTCACACCTGATGACGCTTCCCAGTCTGTGCAAAATTAGATGTCTACGAGTAAAGCGGTGAGTTT-TACTAGCTTGAGGAAAAAGAGCACAGAGTTCCAGGCTGACAAAAAAGAAGAACTGGGAAATTTGAATGACATGGGAGGAAATCTCACAC----AACTGAAAGTCACAGAGGAGAATGTCACAGA--GTAAAAATCTAAAATCAGCACTTAAACTTCATTCAGATATATG
s panTro4.chr3                    125118471 363 - 202329955 ---AAAA--AAA-ATTAAATGCACATTTGATGGTAATGAGAAACAGAAAACAGGCAGAAATACCAGAATATTCAACCACTGATGAAG-TATTTGACCATTGAATAAAGAAAATTGCAATGATTTAAATTTGCATCAATGCAACTTCACACCTGATGACACTCCCTGGTCTGTGCAAAATTAGATGTCTACGAGTAAAGCGATGAGTTT-TACTAGCTTGAGG-ATAAGAGCACAGAGTTCCAGGCTGACAGAAAAGAAGAACTGGGAAATCTGTGTGACATGGGAGGAAATCTCACAC----AACTGAAAGTCACAGAGGAGAATGTCACAGA--GTAAAAATCTAAAATCAGCACTTAAACTTCATTCAGATATATG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5324 364 +    139590 ---AAAA--ACA-ACTAAATACACATTTGATGGTAATGAGAAACAGAAAACAGGCAGAAATAGTAGAATATTCAACCACTGATGAAG-TATTTAACCACTGAATAAAGAAAATCGCAATGATTTAAATTTACATCAATGCAACTTCACATCTGATGACACTCCCTGGTCTGTGCAAAATTGGATGTCTATGAGTAAAGTTGTGAGTTT-TACTAGTTTGAGGAACAACAGCACAGAGTTACAGGCTGACAGAAAAGAAGAACTGGGAAATTTGAGTGGCATGGGAGGAAATCTCACAC----AAGTAGAAGTCACAGAGGAGAATGTCACATA--GTAAAAATCTAAAATCAGCACTTAAACTTCATTCAGCTATATA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465447 362 - 192599291 ---AAAA--ATA---TATGTATATATTTGATGGTAATGAGAAACAGAAAATAGGAAGAAATAGTAGAATATTCAACCACTGATGAAG-TATTTGACCATTGAATAAAGAAAATTGCAATGATTTAAATTTGCATTAATGCAACTTTACACCTGATGACACTCCCCGGGCTGTGCAAAATTGGATGTCTACAAGTAAAGCGGTGAGTTT-TACTGGTTTGAGGAATAAGAGTACAGACTTCCAAGCTGACACAAAAGAAGAACTGGGAAATTTGAGTGACATGGGAGGAAATTTCACAC----AAGGGAAAGTCACAGAGGAGACTGTCACTGA--GTAAAAATCTAAAATCAGCACTTAAACTTCATTCAGATATATG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192303897 362 + 192460366 ---AAAA--ATA---TATATATATATTTGATGGTAATGAGAAACAGAAAATAGGAAGAAATAGTAGAATATTCAACCACTGATGAAG-TATTTGACCATTGAATAAAGAAAATTGCAATGATTTAAATTTGCATTAATGCAACTTTACACCTGATGACACTCCCCGGGCTGTGCAAAATTGGATGTCTACAAGTAAAGCGGTGAGTTT-TACTGGTTTGAGGAATAAGAGTACAGACTTCCAAGCTGACACAAAAGAAGAACTGGGAAATTTGAGTGACATGGGAGGAAATTTCACAC----AAGGGAAAGTCACAGAGGAGACTGTCACTGA--GTAAAAATCTAAAATCAGCACTTAAACTTCATTCAGATATATG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275236 362 - 187378091 ---aaaa--ata---tatatatatatttgatggtaataagaaacagaaaataggaagaaatagtAGAATATTCAACCACTGATGAAG-TATTTGAccactgaataaagaaaattgcaATGATTTAAATTTGCATTAATGCAACTTTACACCTGATGACACTCCCCGGTCTGTGCAAAATTGGATGTCTACAAGTAAAGCAGTGAGTTT-TACTGGTTTGAGGAATAAGAGTACAGACTTCCAAGCTGACACAAAAGAAGAACTGGGAAATTTGAGTGACATGGGAGGAAATCTCACAC----AAGGGAAAGTCACAGAGGAGACTGTCACTGa--gtaaaaatctaaaatcagCACTTAAACTTCATTCAGATATATG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101168890 364 + 101219884 ---AAAAATATA---TATATATATATGTGATGGTAATGAGAAACAGAAAATAGGAAGAAATAGTAGAATATTCAACCACTGATGAAG-TATTTGACCATTGAATAAAGAAAATTGCAATGATTTAAATTTGCGTTAATGCAACTTTACACCTGATGACACTCCCCGGTCTGTGCAAAATTGGATGTCTACAAGTAAAGTGGTGAGTTT-TACTGGTTTGAGGAATAAGAGTACAGACTTCCACGCTGACACAAAAGAAGAACTGGGAAATCTGAGTGACACGGGAGGAAATCTCACAC----AAGGGAAAGTCACAGAGGAGACTGTCACTGA--GTAGAAATCTAAAATCAGCACTTAAACTTCATTCAGATATATG
i chlSab2.chr22                   C 0 C 0
s mm10.chr16                       75522784 347 +  98207768 ---TTAA--AAA-GTAGAAACCACATTACGTAGTACC-AGCAACTGTTAGAAGGCAG-AATGTCAGAGTGTCTGAGGCATGATGGAGATATCT-----TTGAAGGAAACTTATGGAACTGGTTTCAG--TGTTTGGATGCAACTTTGCACCAGATGACACTCCAT--TCTGGGAGACACGAGAAGTCTTCAGATGAGACAGGACATCT-TACAAGCTCAAGAAATTAGAGCAGAGATT---GAGTAGACAGAACTACCAATCTGAGGAAT-GGAGAGAAATGGGATGGAATCCAATGG----AAGTGCATATCACACCAG-GAATGAATCAGA--GTAGAG--CCAAGAACCAAAGGTAAACTCCATCTGGAAATACG
i mm10.chr16                      C 0 N 0
s canFam3.chr31                    11116614 364 +  39895921 aataaaa--ataaaatacacacatatttgatgttatgggggaa----aaataggcagaaa-atcagaatattcatccaatgactgaa-tacttgaccatcaaaggaagataactgctctga-ttaagtgtgctttactgcagctttctacctgatgacactgc--agtct-tgaagaactggatggctacaactggagcagcaattttattccagtgtgaggagtatgagcacagagttccaagctaacaaaacagaagaactgggaaat-tgagtggagtgggagagaatcccatacaagtaagtgaaagtcatagaagaaaatgtcacagatggtgaagatctgaaatattcatataaactccatccagat-tacg
i canFam3.chr31                   I 221 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I

a score=267016.000000
s hg38.chr14_KI270722v1_random        29333 135 +    194050 ATGGCTGCTACATTTCACATTGATAAAAAGAGACTCCATAGAATCCAGCAGAAAACAACAGCTAAATTGCTAGTACAGAGCAGAGATTTCAACCATTGCATATAGC-----------------------------------TCAGGAGT------------------------------------------------------------GAAAGTTTGGTGTTTGACTAC
s panTro4.chr3                    125118834 135 - 202329955 ATGGCTGCTACATTTCACATTCATAAAAAGAGACTCCATAGAATCCAGCAGAAAACAACAGCTAAATTGCTAGTACAGAGCAGAGATTTCAACCATTGCACATAGC-----------------------------------TCAGGAGT------------------------------------------------------------GAAAGTTTGGTGTTTGACTAC
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5688 135 +    139590 ATGGCTGCTACATTTCACATTCATAAAAAGAGACTCCATAGAATCCAGCAGAAAACAACAGCTAAATTGCTAGTACAGAGCAGAGGTTTCAACCATTGCATATAGC-----------------------------------TCAGGAGT------------------------------------------------------------GAAAGTTTGGTGTTTGACTAC
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465809 135 - 192599291 ATGGCTGCTACATTGCACATTCATAAAAAGAGACTCCATAGAATCCAGCGGAAAACAACAGCTAAATTGCTAGTACAGAGCAGAGATTTCAACCACTGCATGTAGC-----------------------------------TCAGGAGT------------------------------------------------------------GGAAATTTGGTGTTTGACTAC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192304259 135 + 192460366 ATGGCTGCTACATTGCACATTCATAAAAAGAGACTCCATAGAATCCAGCGGAAAACAACAGCTAAATTGCTAGTACAGAGCAGAGATTTCAACCACTGCATGTAGC-----------------------------------TCAGGAGT------------------------------------------------------------GGAAATTTGGTGTTTGACTAC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275598 135 - 187378091 ATGGCTGCTACATTGCACATTCATAAAAAGAGACTCCATAGAATCCAGTGGAAAACAACAGCTAAATTGCTAGTACAGAGCAGAGATTTCAACCACTGCATGTAGC-----------------------------------TCAGGAGT------------------------------------------------------------GGAAATTTGGTGTTTGACTAC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169254 135 + 101219884 ATGGCTGCTACATTGTACATTCATAAAAAGAGACTCCATAGAATCCAGTGGAAAACAACAGCTAAACTGCTAGTACAGAGCAGAGATTTCAACCACGGCATGTAGC-----------------------------------TCAGGAGT------------------------------------------------------------GGAAATTTGGTGTTTGACTAC
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11116978 227 +  39895921 gtgactattaagttgcacatgcat-tgaggatactccatagatcccagcagaaagcaatatctgaGGGACAGGCATAGAGCATAGATTTCATCCAC--CATTCAGCACTGTTACTACAATGAGTTACTATGATTTTTATAATCAGGatttaaaataattttttaaatCTCACTAATTCAAACAAATTCCATTCCATCTCACATGAAGTGAGAagtttggtgtttgagtac
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122160031 1233 - 199944510 I

a score=25984.000000
s hg38.chr14_KI270722v1_random        29468 9 +    194050 AGAAAAAAG
s panTro4.chr3                    125118969 9 - 202329955 AGAAAGAAG
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122161264 9 - 199944510 AGAAAGAAG
i gorGor3.chr3                    I 1233 I 804
s nomLeu3.chr21_GL397661_2_random      5823 9 +    139590 AGAAAGAAG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465944 9 - 192599291 AGAAAGAAG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192304394 9 + 192460366 AGAAAGAAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275733 9 - 187378091 AGAAAGAAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169389 9 + 101219884 AGAAAGAAG
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11117205 9 +  39895921 agatagatg
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I

a score=226987.000000
s hg38.chr14_KI270722v1_random        29477 113 +    194050 ACTAATGTTAG-AAAAGAGTcactcttcaaaggaaaatagaagaaccta---tctctacaaaatatcatacacataatctaacatataatttaacctgcctagacat-------aaaaccagga
s panTro4.chr3                    125118978 113 - 202329955 ACTAATGTTAG-AAAAGAGTcagtcttcaaaggaaaataaaagaaccta---tctctacaaaatatcatccacataatctaacatataatttaacctgcctagacat-------agaaccagga
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5832 113 +    139590 ACTAATGTTAG-ACAGGAGTcactcttcaaaggaaaataaaagaaccta---tccctacaaaatatcatccacataatctaacaaataatttaacctgcccagacat-------agaatcagga
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192465953 113 - 192599291 ACTAATGTTAG-AACAGAGTcactcttcaaaggaaaataaaagaaccta---tctctacaaaatatcatccacataatctaacatataatttaacatgcctagacat-------agaaccagga
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192304403 113 + 192460366 ACTAATGTTAG-AACAGAGTcactcttcaaaggaaaataaaagaaccta---tctctacaaaatatcatccacataatctaacatataatttaacatgcctagacat-------agaactagga
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275742 114 - 187378091 ACTAATATTAGAAACAGAGTCActcttcaaaggaaaataaaggaaccta---tctctacaaaatatcatCCACATAATCTAACATATAATTTAACATGCCTAGACAT-------AGAACCAGGA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169398 114 + 101219884 ACTAATATTAGAAACAGAGTcactcttcaaaggaaaataaaggaaccta---tctctacaaaatatcatccacataatctaacatataatttaacatgcctagacat-------agaaccagga
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11117214 121 +  39895921 agtaatactag-aaaa-agtcactcctcaaagaaaaataacaggactcagagtctctacaatatatcagcccca-aatccagtatataattaaaaacagctatgcattaaaaaaaaatacagga
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                   2375 8936 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122161273 804 - 199944510 I

a score=8860.000000
s hg38.chr14_KI270722v1_random        29590 3 +    194050 aaa
s panTro4.chr3                    125119091 3 - 202329955 aaa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5945 3 +    139590 aaa
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192466066 3 - 192599291 aaa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192304516 3 + 192460366 aaa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275856 3 - 187378091 AAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169512 3 + 101219884 aaa
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE928251v1                  11311 2 +     87482 -aa
i tarSyr2.KE928251v1              I 8936 I 14493
s canFam3.chr31                    11117335 3 +  39895921 aaa
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122161273 804 - 199944510 I

a score=149264.000000
s hg38.chr14_KI270722v1_random        29593 75 +    194050 tatgacgcataacaaaaaaagtaaacaatggattaagacagtgaaatggcccacatgctgggattagaagataag
s panTro4.chr3                    125119094 75 - 202329955 tatgacgcataagaaaaaaagtaaacaatggattaagacattgaaatggtccacatgctgggattagaagataag
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      5948 75 +    139590 tatattgcataagaaaaaaagtaaacaacggattaagacattgaaatggcccacatgctgggattagaagataag
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192466069 74 - 192599291 tataatttataag-aaaaaagtaaacaatggattaagacattgaaatagcccacatgctgggattagaagataag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192304519 74 + 192460366 tataatttataag-aaaaaagtaaacaatggattaagacattgaaatagcccacatgctgggattagaagataag
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275859 75 - 187378091 TATGAtccataagaaaaaaagtaaacaatggATTAAGACATTGAAATAGCCCACATGCTGGGATTAGaagataag
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169515 75 + 101219884 tatgatccataagaaaaaaagtaaacaatggattaagacattgaaatagcccacgtgctgggattagaagataag
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11117338 73 +  39895921 tataacacatagg-aaaaaagtagacaatggaaagacacgttgaggtggccta-atttgggaattagaaggcaag
i canFam3.chr31                   C 0 I 171
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122161273 804 - 199944510 I

a score=453169.000000
s hg38.chr14_KI270722v1_random        29668 234 +    194050 aaattt-aaaata-------------------------------------agctattacaagcatattcaaggatttaaggaatagatggtcataagagggaatacatggagaatctcaacagagaagtaaaaacgataaagagataatagg-acaaattttagaactgagaaacagaatatcttatataaaaatgtcattgtatgcacataccagtaaattaaagatggcagaaaaaactatcagtgcacttaaaaacagatcaagaacaat--
s panTro4.chr3                    125119169 234 - 202329955 aaatgt-aaaata-------------------------------------agctattataagcatattcaaggatttaaggaatagatgatcataagagggaatatatggagaatctcaacagagaagtaaaagtgataaacaaataatagg-acaaattttagaactgagagacagaatatcttatataaaaatgtcattgtatgcatataccagtaaattaaagatggcagaaaaaactatcagtgcacttaaaaacagatcaagaacaat--
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      6023 235 +    139590 aaatttaaaaaaa-------------------------------------agctattgtaagcatattcaaagatttaaggaatagatggctataaaagggaatatatggagaatctcaacagagaagtaaaaatgataaagaaataatagg-acaaattttagaactaagggacagaatatcttatgtaaaaatgtcattgtatgcacataccagtaaattaaagatggcagaaaaaactattggtgcacttaaaaacagatcaagaataat--
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192466143 234 - 192599291 aaattt-aaaata-------------------------------------agctattataagcatcttcaaggatttaagaaatagatggtcataagagtgaatatatggagaatcttgacaaagaagcaaaaactataaagaaataatgga-acaaaatttagaactgagggacagaatatcttatataaaaatgccattgtatgcacataccagtaaattaaagatggcagaaaaaactatcagtacacttaaaaacagatcaagaacaat--
i rheMac3.chr2                    C 0 I 1098
s macFas5.chr2                    192304593 234 + 192460366 aaattt-aaaata-------------------------------------agctattataagcatcttcaaggatttaagaaatagatggtcataagagtgaatatatggagaatcttgacaaagaagcaaaaactataaagaaataatgga-acaaaatttagaactgagggacagaatatcttatataaaaatgccattgtatgcacataccagtaaattaaagatggcagaaaaaactatcagtacacttaaaaacagatcaagaacaat--
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187275934 234 - 187378091 aaattt-aaaata-------------------------------------agctaTTATAAGCATCTTCAAGGATTTAAGAAATAGATGGTCATAAGAGTGAATATATGGAGAATcttgacaaagaagcaaaaactataaagaaataatGGA-ACAAAATTTAGAACTGAGGGACAGAATATCTTATATAAAAATGCCATTGTATGCACATACCAGTAAATTAAAGATGGCAGAAAAAACTATCAGTACACTTAAAAACAGATCAAGAACAAT--
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169590 233 + 101219884 aaattt-aaaata-------------------------------------agctattataagcatcttcaaggatttaagaaatagatggtcataagagtgaatacatggagaatcttgacaaagaagc-aaaactacaaagaaataatgga-acaaaatttagaactgagggacagaatatcttatataaaaatgccattgtatgcacataccagcaaattaaagatggcagaaaaaactatcagtacacttaaaaacagatcaagaacaat--
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11117582 262 +  39895921 aaaaat-aaaataaaataaaataaaataaaGAaggcaaggattgtatgttagctagtataagtaaactcaagaattaaagaaatagatggtcatacatgtgaatatatggggaatttcaacaagggaataaaaacaacaagaaaaaaggaaatagaaatgctagcactgatgaatataatatttaatatgaaaaatttactagataggcttaccag--------atgtgatagaaaaaagtatcaataaatctga----agataaagaacatttt
i canFam3.chr31                   I 171 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122161273 804 - 199944510 I

a score=48078.000000
s hg38.chr14_KI270722v1_random        29902 33 +    194050 ttcccaatacagtt---aataaaaagaaagaaaaat
s panTro4.chr3                    125119403 36 - 202329955 ttcccaatacagttaaaaatacagaggaagaaaaat
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      6258 33 +    139590 ttcccaatacagttaagaatacagaggaagaaa---
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192304827 36 + 192460366 ttcccaatacagttaagaatacagaggaagaaaaat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187276168 36 - 187378091 TTCCCAATACAGTTAAgaatacagaggaagaaaaat
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169823 36 + 101219884 ttcccaatacagttaagaatacagaggaagaaaaat
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11117844 33 +  39895921 ttttcaa---aatgaagaatacagaggaaaaaatat
i canFam3.chr31                   C 0 I 1887
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122161273 804 - 199944510 I
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=432903.000000
s hg38.chr14_KI270722v1_random        29935 340 +    194050 aataaaaatagggccagtctagcactaatataattggagtcctagaacgagtagagaag---aaaatgagacagaaaaagctatttgaaaaagtaaagaccaaaagttttcctaattgtcagcatatatcaatttacaggtttaagaaactcaaagaacagaataaaaataaagagaaccaaatgtagacataccatagtcaagccactgggcaaaaaaagagtaaatcttgaaagtagctaaagggagggagaaaataatttacatacgtggaaacaaatagacagatgacctgtcatcagaaatgac--actttaaaaagcaatgaaactacatcttcaaaat
s panTro4.chr3                    125119439 339 - 202329955 aataaaaatagggccagtctagaactaatataattggagtcctagaaagagtagagaagaacaaaaggagacagaaaaagctatttgaaaaagtaaagacaaaaagttttcctaactgtcagcatatatcaacttacaggtttaagaaactcaaagaacagaataaaaataaagagaaccaaatgtagacataccatagtcaaaccactgggctaaaaaagagtaaatcttgaaagtagctaaagggagggagaaaataatttacatacatggaaacaaat----agatgacctgtcatcagaaatgac--agtttaaaaagcaatgaaactacatcttcaaaat
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      6291 343 +    139590 aataaaaataggacgagtctagaactaatataattggagtcctagaaagagtagagaagcagaaaatgagacagaaaaagctatttgaaaaagtaaagaccaaaagttttcctaattgtcagcatatatcaacttacagatttaagaaactcaaagaacagaataaaaataaagagaaccaaatgtatacataccatagtcaaaccactcagcaaaaaaagagtaaatgtagaaagtagctaaagggagggagaaaataatttacatacatggaaacaaatagacagatgacctgtcatcagaaatgac--agtttaaaaagcaatgaaactacatccccaaaat
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192304863 345 + 192460366 aataaatataggaccagtctagaactaacataattggagtcctagaaagagtagagaaggagaaaatgagacagaaaaagctatttgaaaaagtaaagaccaacagttttcctaattgtcagcatatatcaacttacagattcaagaaactcgaagaacagaataaaaataaagagaaccaaatgtagacataccatagtcaaaccactgggcaaaaaaagagtaaatcttgaaagtagctaaagggatagagaaaataatttacatacatggaaacaaatagagagatgacctgtcatcagaaatgacaaagtttaaaaagcaatgaaactacatcttcaaaat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187276204 345 - 187378091 aataaaaataggacCAGTCTAGAACTAACATAATTGGGATCCTAGAAAGAgtagagaaggagaaaatgagacagaaaaagcTATTTGAAAAAGTAAAGACCAACAGTTTTCCTAAATGTCAGCATATATCAACTTACAGAttcaagaaactcaaagaacagaataaaaataaagagaaccaAATGTAGACATACCATAGTCAAACCACTGGGCaaaaaaaGAGTAAATCTTGAAAGTAGCTAAAGggatagagaaaataatttacatacatgGAAACAAATAGACAGATGACCTGtcatcagaaatgacaaagtttaaaaagcaatgaaactacatcttcaaaat
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101169859 345 + 101219884 aataaatataggaccagtctagaactaacataattggagtcctagaaagagtagagaaggagaaaatgagacagaaaaagctatttgaaaaagtaaagaccaacagttttcctaattatcaacatatatcaacttacagattcaagaaactcgaagaacagaataaaaataaagagaaccaaatgcagacatgccatggtcaaaccactgggcaaaaaaagagtaaatcttgaaagcagctaaagggatagagaaaataatttacatgcatggaaacaaatagacagatgacctgtcatcagaaatgacaaagtttaaaaagcaatgaaactacatcttcaaaat
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122161273 804 - 199944510 I
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=6912.000000
s hg38.chr14_KI270722v1_random        30275 4 +    194050 aaaa
s panTro4.chr3                    125119778 4 - 202329955 aaaa
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122162077 4 - 199944510 aaaa
i gorGor3.chr3                    I 804 I 257
s nomLeu3.chr21_GL397661_2_random      6634 4 +    139590 aaaa
i nomLeu3.chr21_GL397661_2_random C 0 I 1
s macFas5.chr2                    192305208 4 + 192460366 aaaa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187276549 4 - 187378091 aaaa
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101170204 4 + 101219884 gaaa
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=296613.000000
s hg38.chr14_KI270722v1_random        30279 251 +    194050 --gaaaa-ctgtcaactcaaaattctatcactagaaacagtaattctagagaaaagaaagatttagtcagataaaagaaagcttcgaacagttgtcattagcagacctagatacaagaaatgcaaacgggaa-ttttttaggctaaagaaagataacaacagatggaaattctgacctacaggaagcaaggagaagctctaggaatggcatgtgcataaacatgaaaaactaagg-cttttctcttttagttttat
s panTro4.chr3                    125119782 252 - 202329955 --aaaaacctgtcaactccaaattctataactagaaaaagtcattgtcgagaaaataaagatttattcagataaaagaaagcttcgaatatttgtcattagcagacctaaatacaagaaatgcaaacggaaa-tgttttaggctaaagaaagataacaacagatggaaattaggacctacaggaagcaaggagaagctctaggaatgccaagtgcataaacatgaaaaactaagg-cttttttcttttagttttat
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      6639 252 +    139590 --aaaaacctgtcaactccaaattgtataactagaaaaagtaattcttgagaaaataaagatttattcagataaaacaaagcttcaaacatttgtcattagcagacctaaatacaagaaatgcaaacggaaa-ttttttaggctaaagaaagataacaacagatggaaatttggacctacagaaagcaaggagaagctctaggaatggcaagtgcataaacatgaaaaactaagg-cttttttcttttagttttat
i nomLeu3.chr21_GL397661_2_random I 1 C 0
s macFas5.chr2                    192305212 255 + 192460366 aacaatacctgtcaactccaaattctataactagaaaaagtaattattgagaaaataaagatttattcagagaaaagaaagcttcaaacatttgtcattagcagacctaaatacaagaaatgcaaatggaaa-ttttttaggctaaagaaagataacaacagatggaaattctgacctacaggaagcgaggagaagctctaggaatgacatgtgcataaacatgaaaaattaagggtttttttctttcagttttat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187276553 256 - 187378091 aacaatacctGTCAACTCCAAATTCTATAACTAGAAAAAGTAATTCttgagaaaataaagatttattcagagaaaagaaagcttCAAACATCTGTCATTAGCAGACCTAAATAcaagaaatgcaaatggaaatttttttagGCTAAAGAAAGATAACAACAGATGGAAATTCTGACCTACAGGAAGCGAGGAGAAGCTCTAGGAATGACATGTgcataaagatgaaaaattaagggtttttttctttcagttttat
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101170208 253 + 101219884 aacaatacctgtcagctccaaattctataactagaaaacgcagttcttgagaaaataaagatttattcagagaaaagaaagcttcaaacgtttgttgttagcagacctaaatacaagaaacgcaaacggaaa-ttctttaggctgaagaaagacaacaacagatggaaattctgacctgcaggaagcgaggagaagctctaggaataacatttgcataaacatgaaaaattaggg--ttttttctttcagttttat
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162081 257 - 199944510 I
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=5595.000000
s hg38.chr14_KI270722v1_random        30530 4 +    194050 aaca
s gorGor3.chr3                    122162338 4 - 199944510 aaca
i gorGor3.chr3                    I 257 I 4313
s nomLeu3.chr21_GL397661_2_random      6891 4 +    139590 aaca
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192305467 4 + 192460366 aaca
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187276809 4 - 187378091 aaCA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101170461 4 + 101219884 aaca
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e panTro4.chr3                    125120034 0 - 202329955 C
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=416934.000000
s hg38.chr14_KI270722v1_random        30534 338 +    194050 aacaactgatggtttcaataaaaaattaagtgtactattgataatgtat-----gtaaaatattctaaattaatagctctgacaggagactaaacgcaacaattttgctgcaacttttctttatgttacatgaaaatgctgactatta--acactaagtggactgcgataagcccaggatgtttattataatccctagagaaccaccacattatatgaagatattcttctaaaatgccaataaaggaattaaaatggaaccctgaataatgttcagttaatataaaaaggcatgaaagaaagaacagaggagcaaaaaatgatggaacaaatagaacat-aagagc
s panTro4.chr3                    125120034 345 - 202329955 aacaactgatggtttaaataaaaaattaagtgtactattgataatgtatgtggagtaaaatattctaagttaatagctctgacagaagactaaacacaacaattttgctgcaacatttcttcatgttacatgaaaacgttgactattaacacactaagtggagtgtgataggcccaggatgcttattataatccctagagaaccaccacattatatgaagatattcttctaaaatgccaataaaggaattaaaatggaacactgagtgttgttcagttgatataaaaaggcatgaaagaaagaacagaggagcaaaaaatgatggaacaaatagaacat-aagagc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      6895 343 +    139590 aacaactgatggtttaaataaaaaattaagtgtagtattgataatgtgtgtagagtaaaatattctaaattaatagctctgacaggagactaaacacaacaattttgctgcaacatttctttacgttacatgaaaacgttgattatta--acactaagtggactgcgataagcccaggatgcttattataatccctagagaaccaccacattatatgaagacattcttctaaaatgccaataaaggaattaaaatgcaatgctgaatattgttcagttaatgtaaaaaggcatgaaagaaagaacagaggagcaaaaaatgaaggaacaaatagaatat-aaGAGC
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192305471 344 + 192460366 aacaactgatggtttcaataaaaaattaagtgtactattgataatgcatgtagagtaaaatattctaaattaatagctctgacaggagactaaatgcaacaattttgctgcaatatttctttatgttacatgaaaacattgagtatta--acactgagtggagggcgataagcccaggatttttattataatccctagagaaccatcacatcatatgaagatattcttctaaaatgccaataaaggaattaaaagggaacactgaatattgttcaattaatataaaaagccatgaaagaaagaacagtggaggaaaaaatgatggaaaaagtagaacataaagagc
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187276813 343 - 187378091 AACAACTGATGgtttcaat-aaaaattaagtgTACTATTGATAATGCATGTAgagtaaaatattctaaattaatAGCTCTGACAGGAGACTAAATGCAACAATTTTGCTGCAACATTTCTTTATGTTACATGAAAACATTGAGTATTA--ACACTAAGTGGAGGGCGATAAGCCCAGGATTTTTATTATAATCCCTAGAGAACCACCACATCATATGAAGATAGTCTTCTAAAATGCCAATAAAGGAATTAAAAGGGAACACTGAATATTGTTCAATTAATATaaaaagccatgaaagaaagaacagtggaggaaaaaatgatggaaaaaatagaacataaagagc
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101170465 344 + 101219884 aacaactgatggtttcaataaaaaattaagtgtactattgataatgcatgtagattaaaatattctaaattaatagctctgacaggagactaaatgcaacaattttgctgcaccatttctttatgttacatgaaaacattgagtatta--acactacgtggagggcgataagcccaggatttttattataatccctagagaaccaccacatcatatgaagatattcttctaaaatgccaataaaggaattaaaagggaacactgaatattgttcaattaatataaaaagccatgaaagaaagaacagtggaggaaaaaatgatgggaaaaatagaacataaagagc
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=2184.000000
s hg38.chr14_KI270722v1_random        30872 4 +    194050 aaaa
s panTro4.chr3                    125120379 4 - 202329955 aaaa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      7238 4 +    139590 AAAA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s papAnu2.chr2                    187277156 4 - 187378091 aaaa
i papAnu2.chr2                    C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e chlSab2.chr22                   101170809 0 + 101219884 C
e macFas5.chr2                    192305815 0 + 192460366 C
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=42780.000000
s hg38.chr14_KI270722v1_random        30876 208 +    194050 taggctcggtaccgtggctca-gcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggagatcgagactatcctggctaacacggtgaaaccccgtctttactaaaaatac-aaaaattagccgggggtggcggcgggagcctgtagtaccagctactccagatgctgaggcaggaaaatggcgtgaacccgg
s panTro4.chr3                    125120383 209 - 202329955 taggccgggtgcagtggctcacgcctgtaatcccagcacttggggaggccgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcagc-gcctgtggtcccagctacttatgaggctgaggcaggagaatggcgggaacccgg
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      7242 207 +    139590 TAggctaggcgcagtggctcacacctgtaatcccagcact--gggaggatgaggcaggtggaacactaggtcaggagatcgagaccatcctcgttaacacagtgaaaccccatctctactgaaaatacaaaaaattagccaggcacggtggtggt-gcctgttgtcccatctactcgggaggctgaggcaggagaatggcgggaacctga
i nomLeu3.chr21_GL397661_2_random C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e chlSab2.chr22                   101170809   0 + 101219884 C
e papAnu2.chr2                    187277160   0 - 187378091 C
e macFas5.chr2                    192305815   0 + 192460366 C
e rheMac3.chr2                    192466377 1098 - 192599291 I

a score=7161.000000
s hg38.chr14_KI270722v1_random        31084 105 +    194050 gaggtggaacttgcagtgagccgagatcccgccactgcactccagcctgggtgacaggaccagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaagaaaagca
s panTro4.chr3                    125120592  99 - 202329955 gaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcaagactccgtctcaattaaaaaaaaaaaaaaaaaaaag------c
i panTro4.chr3                    C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e chlSab2.chr22                   101170809   0 + 101219884 C
e papAnu2.chr2                    187277160   0 - 187378091 C
e macFas5.chr2                    192305815   0 + 192460366 C
e rheMac3.chr2                    192466377 1098 - 192599291 I
e nomLeu3.chr21_GL397661_2_random      7449   0 +    139590 C

a score=3640.000000
s hg38.chr14_KI270722v1_random        31189 4 +    194050 aaaa
s panTro4.chr3                    125120691 4 - 202329955 aaaa
i panTro4.chr3                    C 0 C 0
s rheMac3.chr2                    192467475 4 - 192599291 aaaa
i rheMac3.chr2                    I 1098 C 0
s macFas5.chr2                    192305815 4 + 192460366 aaaa
i macFas5.chr2                    C 0 C 0
s chlSab2.chr22                   101170809 4 + 101219884 aaaa
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e papAnu2.chr2                    187277160 0 - 187378091 C
e nomLeu3.chr21_GL397661_2_random      7449 0 +    139590 C

a score=1905037.000000
s hg38.chr14_KI270722v1_random        31193 1555 +    194050  
s panTro4.chr3                    125120695 1548 - 202329955  
i panTro4.chr3                    C 0 C 0
s rheMac3.chr2                    192467479 1547 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192305819 1548 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187277160 1552 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101170813 1552 + 101219884  
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19580130 22908 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e nomLeu3.chr21_GL397661_2_random      7449    0 +    139590 C

a score=7833.000000
s hg38.chr14_KI270722v1_random        32748 4 +    194050 tatc
s panTro4.chr3                    125122243 4 - 202329955 tatc
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19603038 4 -  19803153 tatc
i panPan1.JH650580                I 22908 I 1560
s rheMac3.chr2                    192469026 4 - 192599291 tatc
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192307367 4 + 192460366 tatc
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187278712 4 - 187378091 tatc
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101172365 4 + 101219884 tatc
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e nomLeu3.chr21_GL397661_2_random      7449 0 +    139590 C

a score=195605.000000
s hg38.chr14_KI270722v1_random        32752 159 +    194050 tattcatctgccaatagacattaacctcatttccacattttg-attagtgtaaataatgctgcaatgagcctgagaatcatcccaatctcaattctttcagataaataacctgaagtg-gattgctagatcatatggtagttctagtttcttaattttttt
s panTro4.chr3                    125122247 160 - 202329955 tattcatctgccaatagacattaaacttatttccacattttg-attagtgtaaataatgctacaatgagcctgagaatcatcccaatttcaattctttcagataaataacctgaagtgagattgctagatcatatggcagttctattttcttaattttttt
i panTro4.chr3                    C 0 C 0
s rheMac3.chr2                    192469030 159 - 192599291 tattcatctgccaatagacattaaccttatttccacattttg-aatagtgtaaataatgctgcaatgagcctgagaatcatcccaatttcaattatttcagataaataacctgaagtgagattgctagatcatacagtagttctactttgtt-attttttt
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192307371 159 + 192460366 tattcatctgccaatagacattaaccttatttccacattttg-aatagtgtaaataatgctgcaatgagcctgagaatcatcccaatttcaattatttcagataaataacctgaagtgagattgctagatcatacagtagttctactttgtt-attttttt
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187278716 160 - 187378091 tattcatctgccAATAGACATTAACCTTATTTCCACATTTTG-AATagtgtaaataatgctgcaatgagccTGAGAATCATCCCAATTTCAattatttcagataaataacctgaagtgagattgctagatcatacagtagttctactttcttaatgttttt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101172369 161 + 101219884 tgttcatctgccaacagacagaaaccttatttccacattttgaaatagtgtaaataacgctgcagtgagcctgagaatcatcccaatttcaattatttcacataaataacctgaagtgagattgctagatcatacagtagctctactttcttaatgttttt
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19603042 1560 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I
e nomLeu3.chr21_GL397661_2_random      7449   0 +    139590 C

a score=1997884.000000
s hg38.chr14_KI270722v1_random        32911 1192 +    194050  
s panTro4.chr3                    125122407 1265 - 202329955  
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      7449 1240 +    139590  
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192469189 1292 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192307530 1296 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187278876 1246 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101172530 1257 + 101219884  
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19603042 1560 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11117877 1887 +  39895921 I
e gorGor3.chr3                    122162342 4313 - 199944510 I

a score=2800.000000
s hg38.chr14_KI270722v1_random        34103 1 +    194050 G
s panTro4.chr3                    125123672 1 - 202329955 G
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      8689 1 +    139590 G
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470481 1 - 192599291 G
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192308826 1 + 192460366 G
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187280122 1 - 187378091 G
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101173787 1 + 101219884 G
i chlSab2.chr22                   C 0 I 217
s canFam3.chr31                    11119764 1 +  39895921 G
i canFam3.chr31                   I 1887 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19603042 1560 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122162342 4313 - 199944510 I

a score=317910.000000
s hg38.chr14_KI270722v1_random        34104 163 +    194050 CCCCATGATCACAACTGGAA-----TATATCTGTCAGAGATGGTGCAGAAATAAGACT--GAAGAGAGAGATCCTTAAACCCCATGTGCCTTACGTAAGGACTAATCCTGGACACAAGCTGGAAAGCATAGCCTACAGGT----------------------GGTGAGGGAGGAGG------AGTGGGCTCTGCTGTG
s panTro4.chr3                    125123673 163 - 202329955 CCCCATGATTACAACTAGAA-----TATATCTGTCAGAGATGGTGCAGAAATAAGACT--GAAGAGAGAGCGCCTTAAACCCCACGTGCCTTACCCCAGGACTAATCCTGGACACAGGCTGGAAAGCATAGCCTACAGGT----------------------GGTGAGGGAGGAGG------AGGGGGCTCAGCTGTG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      8690 163 +    139590 CCCCATGATTACAACTAGAA-----TACATCTGTCAGAGATGGTGCGGAAATAAGACT--GAAGAGAGAGCTGCTTAAACCCCACGTGTCTTACGTCAGGACTAATCCTGGACACAGGCTGGAAAGCATAGCCTACAGGT----------------------GGTGAGAGAGGAAG------AGTGGGCTCAGCTGTG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470482 163 - 192599291 CCCCATGATTACAACTAGAA-----CACATCTGTCAGAGATGGTGCAGAAATAAGACT--GAAGAGAGAGCTCCTTAAACCCCACGTGCCTTACGTCAGGAATAATCCTGGACACAGACAGCAAAGCATAGCCCACAGGT----------------------GGTGAGGGAGGAGG------AGTAGGCTCAGCTGTG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192308827 163 + 192460366 CCCCATGATTACAACTAGAA-----CACATCTGTCAGAGATGGTGCAGAAATAAGACT--GAAGAGAGAGCTCCTTAAACCCCACGTGCCTTACGTCAGGAATAATCCTGGACACAGACAGCAAAGCATAGCCCACAGGT----------------------GGTGAGGGAGGAGG------AGTAGGCTCAGCTGTG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187280123 163 - 187378091 CCCCATGATTACAACTAGAA-----TACATCTGTCAGAGATGGTGCAGAAATAAGACT--GAAGAGAGAGCTCCTTAAACCCCACGTGCCTTACGTCAGGAATAATCCTGGACACAGACAGCAAAGCATAGCCTACAGgt----------------------ggtgagggaggagg------agtAGGCTCAGCTGTG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101174005 163 + 101219884 CCCCATGATTACAACTAGAA-----TACATCTGTCAGAGACGGTGCAGAAATAAGACT--GAAGAGAGAGCGCCTGAAACCCCACGTGCCTTATGTCAGGAATAATCCTGGACACAGACAGCAAAGCATCGCCTACAGGT----------------------GGTGAGGGAGGAGG------AGTAGGCTCAGCTGTG
i chlSab2.chr22                   I 217 C 0
s canFam3.chr31                    11119765 191 +  39895921 TCTCATAATTATTACAGGAATACTCTACAACTATCAGAGGTGATGCATGAATACAACTTCAAAAAATGAGGTCTTTCAATCCCTTCTGCCATAGGTCAGGATTAGCCCTAGACAC-------ATAGTGTAGCCTATGGATATTGGTGTGTTAGGAGCAGGAAAGGGAGAGGGGAGGGCTGGTAAAGGGCCAGGCTGTG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19603042 1560 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122162342 4313 - 199944510 I

a score=4696.000000
s hg38.chr14_KI270722v1_random        34267 3 +    194050 AGA-
s panTro4.chr3                    125123836 3 - 202329955 AGA-
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19604602 3 -  19803153 AGA-
i panPan1.JH650580                I 1560 I 841
s nomLeu3.chr21_GL397661_2_random      8853 3 +    139590 AGA-
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470645 3 - 192599291 AGA-
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192308990 3 + 192460366 AGA-
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187280286 3 - 187378091 AGA-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101174168 3 + 101219884 AGA-
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11119956 3 +  39895921 -AAT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122162342 4313 - 199944510 I

a score=7368.000000
s hg38.chr14_KI270722v1_random        34270 5 +    194050 AGGAG
s panTro4.chr3                    125123839 2 - 202329955 ---AG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      8856 2 +    139590 ---AG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470648 5 - 192599291 AGGAG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192308993 5 + 192460366 AGGAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187280289 5 - 187378091 AGGAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101174171 5 + 101219884 AGGAG
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11119959 5 +  39895921 GAGAG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19604605 841 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122162342 4313 - 199944510 I

a score=4536.000000
s hg38.chr14_KI270722v1_random        34275 3 +    194050 AAG--
s panTro4.chr3                    125123841 3 - 202329955 AAG--
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122166655 3 - 199944510 AAG--
i gorGor3.chr3                    I 4313 I 836
s nomLeu3.chr21_GL397661_2_random      8858 3 +    139590 AAG--
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470653 3 - 192599291 AAG--
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192308998 3 + 192460366 AAG--
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187280294 3 - 187378091 AAG--
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101174176 3 + 101219884 AAG--
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11119964 3 +  39895921 --GTG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19604605 841 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I

a score=247674.000000
s hg38.chr14_KI270722v1_random        34278 133 +    194050 GAAATATGGCTG-AAAACCAGATATGGGTCTTGAAATCACACCGAGGATTTGGGCCTTTGCTGCTGTCTGCCAGCAGCTGCcagtagttctcacactttggctggcatcaaaataacctggggcagttgtGGGG
s panTro4.chr3                    125123844 133 - 202329955 GAAATACAGCTG-AAAACAAGATACGGGTCTTGAAATCACACAGAGGTTTTGGGCCTTTGTTGCTGTCTGCCAGCAGCTGCcagtagttctcacattttggctggcatcaaaatcacctggggCAGTGGTGGGG
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      8861 132 +    139590 GAAATATGGCTG-AAAACCAGATACGGGTCTGGAAATCACACAGAGGATTTGGGCCCTTGTTGCTGTCTGCCAGCAGCTGCcagtagttctcacactttggctggcatcaaaatcacct-ggaCAGTGGTGGGG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470656 133 - 192599291 GCAACATGGCTG-AAAAGCAGATACGGGTCTTGAAATCACACAGAGGATTGGGGCCTCTGTTGCTCTCTGATAGCAGCTGCcagtagttctcacactttggctggcatcaaaatcacctggggCAGTGGTGGGG
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192309001 133 + 192460366 GCAACATGGCTG-AAAAGCAGATACGGGTCTTGAAATCACACAGAGGATTGGGGCCTCTGTTGCTCTCTGATAGCAGCTGCcagtagttctcacactttggctggcatcaaaatcacctggggCAGTGGTGGGG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187280297 133 - 187378091 GCAACATGGCTG-AAAACCAGATACGGGTCTTGAAATCACACAGAGGATCAGGGCCTTTGTTGCTCTCTGATAGCAGCTGCCAGTAGTTCTCACACTTTGGCTggcatcaaaatcacctggggCAGTGGTGGGG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101174179 133 + 101219884 GCAACATGGCTG-AAAACCAGATACGGGTCTTGAAATCACACAGAGGATCAGGGCCTTTGTTGCTCTCTGATAGCAGCTGCcagtagttctcacactttggctggcatcaaaatcaccgggggCAGTGGTGGGG
i chlSab2.chr22                   C 0 I 9
s canFam3.chr31                    11119967 103 +  39895921 ---TTAAGGCTGAAAAACTAGATGC-AGTCTCTAAACCATATGGGAGATTTCATCCTTTGTTGCTCTCTGCT---AGTTGCTAATAGTCCTCA-------------attagaatcacctgaag-----------
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19604605 841 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122166658 836 - 199944510 I

a score=135.000000
s hg38.chr14_KI270722v1_random        34411 11 +    194050 AAGTGGCGGGA
s panTro4.chr3                    125123977 10 - 202329955 AAGCGA-GGGA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      8993 11 +    139590 AAGGGGGCGGA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470789  8 - 192599291 ---CGAGGGGT
i rheMac3.chr2                    C 0 I 1
s macFas5.chr2                    192309134  8 + 192460366 ---CGAGGGGT
i macFas5.chr2                    C 0 I 1
s papAnu2.chr2                    187280430  8 - 187378091 ---CGACGGGT
i papAnu2.chr2                    C 0 I 1
s canFam3.chr31                    11120070  3 +  39895921 --------ggc
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19604605 841 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122166658 836 - 199944510 I
e chlSab2.chr22                   101174312  9 + 101219884 I

a score=1337241.000000
s hg38.chr14_KI270722v1_random        34422 689 +    194050  
s panTro4.chr3                    125123987 693 - 202329955  
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      9004 700 +    139590  
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192470798 698 - 192599291  
i rheMac3.chr2                    I 1 C 0
s macFas5.chr2                    192309143 698 + 192460366  
i macFas5.chr2                    I 1 C 0
s papAnu2.chr2                    187280439 698 - 187378091  
i papAnu2.chr2                    I 1 C 0
s chlSab2.chr22                   101174321 698 + 101219884  
i chlSab2.chr22                   I 9 C 0
s canFam3.chr31                    11120073 657 +  39895921  
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19604605 841 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122166658 836 - 199944510 I

a score=21285.000000
s hg38.chr14_KI270722v1_random        35111 5 +    194050 TGTGT
s panTro4.chr3                    125124680 5 - 202329955 TGTGT
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19605446 5 -  19803153 TGTGT
i panPan1.JH650580                I 841 I 237
s gorGor3.chr3                    122167494 5 - 199944510 TGTGT
i gorGor3.chr3                    I 836 I 22
s nomLeu3.chr21_GL397661_2_random      9704 5 +    139590 TGTGT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471496 5 - 192599291 TGTGT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192309841 5 + 192460366 TGTGT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281137 5 - 187378091 TGTGT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175019 5 + 101219884 TGTGT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11120730 5 +  39895921 TGTGT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I

a score=42504.000000
s hg38.chr14_KI270722v1_random        35116 22 +    194050 TGTATGTTTTACTGTAAAAGTA
s panTro4.chr3                    125124685 22 - 202329955 TGTATGTTTTACCGTAAAAGTA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      9709 22 +    139590 TGTATGTTTTACTGTAAAAGGA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471501 22 - 192599291 TGTATATTTTACTGTAAAAGTA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192309846 22 + 192460366 TGTATATTTTACTGTAAAAGTA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281142 22 - 187378091 TGTATATTTTACTGTAAAAGTA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175024 22 + 101219884 TGTATATTTTACGGTAAAAGTA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11120735 19 +  39895921 TGTATGTTTTACTAGTAAA---
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605451 237 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122167499 22 - 199944510 I

a score=8958.000000
s hg38.chr14_KI270722v1_random        35138 5 +    194050 ATCTT
s gorGor3.chr3                    122167521 5 - 199944510 ATTTT
i gorGor3.chr3                    I 22 I 214
s nomLeu3.chr21_GL397661_2_random      9731 5 +    139590 ATCTT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471523 5 - 192599291 ATCTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192309868 5 + 192460366 ATCTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281164 5 - 187378091 ATCTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175046 5 + 101219884 ATCTT
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605451 237 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11120754 0 +  39895921 C
e panTro4.chr3                    125124707 0 - 202329955 C

a score=430617.000000
s hg38.chr14_KI270722v1_random        35143 215 +    194050 ATTTTACCTTATAACCT--CTACAATCCAATTCATAACAGCATAAAAAGGAAATAAAACCTT-ACATAATTTTGAA-----TTTTGAAAAGTACCTTGTTTATTTGGTT-CCTTTAGCTAATGAATAGA--CAATTTGGTAAATATTCCAGTGAGTTGAAGGTTTGAATCTATCTCAC---TTAACTAGCTTAATGGATATATTTCTAAACCTATACAACCCACTCCTC
s panTro4.chr3                    125124707 215 - 202329955 ATTTTACCTTATAACCT--CTACAATCCAATTCATAACAGTATAAAAAGGAAATAAAACCTT-ACATAATTTTGAA-----TTTTAAAAAGTACCTTGTTTATATGGCT-CCTTTAGATAATGAATAGT--TAATTTGGTAAATATTCCAGTGAGTTGCAGGTTTGAATCTACATCAC---TTAACTAGCTTAATGGATGTATTTCTAAACCTATACAACCCACTCCTC
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      9736 215 +    139590 ATTTCACCTTATAACCT--CTACAATGCAATTCATAACAGCATAAAAAGGAAATAAAACCTT-ACATAATTTTGAA-----TTTTAAAAAGTACCTTGTTTATATGGCT-CCTTTAGATAATGAATCGT--CAATTTGTTAAATATTCCAGTGAGTTGAAGGTTTGAATCTATCTCAC---TTAACTAGCTTGATGGATATATTTCTAAACCTATACAACCCATTCCTC
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471528 215 - 192599291 ATTTTACCTTATAACCT--CTACAATCCAATTCATAACAGTATAAAAAGGAAATAAAACCTT-ACATAGTTTTGAA-----TTTTAAAAAGTACCTCGTTGGTATGGCT-CCTTTAGATAATGAATAGT--CAGTTTGGTAAATATTCCAATGAGGTGAAGGTTTGAATTTACCTCAC---TTAATGAGCTTAATGGATGTATTTCTAAACCTATACAACCCACTCCTC
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192309873 215 + 192460366 ATTTTACCTTATAACCT--CTACAATCCAATTCATAACAGTATAAAAAGGAAATAAAACCTT-ACATAGTTTTGAA-----TTTTAAAAAGTACCTCGTTGGTATGGCT-CCTTTAGATAATGAATAGT--CAGTTTGGTAAATATTCCAATGAGGTGAAGGTTTGAATTTACCTCAC---TTAATGAGCTTAATGGATGTATTTCTAAACCTATACAACCCACTCCTC
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281169 216 - 187378091 ATTTTACCTTATAACCT--CTACAATCCAATTCATAGcagtataaaaaggaaataaaacctt-acatagttttgaa-----ttttaaaaagtacctcATTTGTATGGCTCCCTTTAGATAATGAATAGT--CAGTTTGGTAAATATTCCAATGAGGTGAAGGTTTGAATTTACCTCAC---TTAATGAGCTTAATGGATGTATTTCTAAACCTATACAACCCACtcctc
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175051 216 + 101219884 ATTTTACCTTATAACCT--CTACAATCCAATTCATAACAGTATAAAAAGGAAATAAAACCTT-ACATAGTTTTGAA-----TTTTAAAAAGTACCTCGTTTGTATGGCTCCCTTTAGATAATGAATAGT--CAGTGTGGTAAATATTCCAGTGAGGTGAAGGTTTGAATTTACCTCAC---TTAATGAGCTTAAAGGATGTATTTCTAAACCTATACAACCCACTCCTC
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11120754 226 +  39895921 ACTTGACCTTATACCCCCACTAAAATCCAATTCACGATAGGATTAAAAAGATATAAAACCTCAATGTCATTTGTGATTTCTTTTTAAAAAAAATCTTGCTTATATGGCA-ATTTTAGATAATGAATTGTTCTGATTAGATAGGTGTTCCAGGGAGCTGGA-ATGTAAACCCATCTCACTATTTAACTAACTTAATATATAAATTTCC-AATATATACAACCCACTTCTC
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605451 237 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122167526 214 - 199944510 I

a score=4095.000000
s hg38.chr14_KI270722v1_random        35358 1 +    194050 T
s panTro4.chr3                    125124922 1 - 202329955 T
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19605688 1 -  19803153 t
i panPan1.JH650580                I 237 I 588
s gorGor3.chr3                    122167740 1 - 199944510 T
i gorGor3.chr3                    I 214 I 589
s nomLeu3.chr21_GL397661_2_random      9951 1 +    139590 T
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471743 1 - 192599291 T
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310088 1 + 192460366 T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281385 1 - 187378091 t
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175267 1 + 101219884 T
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11120980 1 +  39895921 T
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I

a score=496670.000000
s hg38.chr14_KI270722v1_random        35359 234 +    194050 GCTTTTAAAAAA-TTAAAGTTAGCTGTAGATTGAGATGTCAGTGACACAGTTTATAGAACATAACTTAGATTGTCATCTACATTACTGTAACTACAAATACCACCCTCAGATGGAAGAATCAGTTTTATCAGTGAACATCTCTAATTGAACTATAAATGGTATATGTCTTCTGGCTTTTACAAGCTCTTGGTCTAACAC--GGGATATATGATGTAAA-AATTACAAAGCAAggccat
s panTro4.chr3                    125124923 236 - 202329955 GCTTTTCAAAAA-TTAAAGTTAGCTGTAGATTGAGATATCAGTGACACAGTTTATTGAACATAACTTAGATTGTCATCTACATTACTGTAACTACAAATGCCATCCTCAGATCGAAGAATCAGTTTTATCAGTAAACATCTCTAATTGAACTATAAATGGTGTATGTCTTCTGTCTTTTACAAGCTTTTGGTCTAACACAGGGGATATATGATGTAAA-AATTACAAAGGAAggccgc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random      9952 236 +    139590 GTTTTTAAAAAA-TTAAAGTTAGCTGTAGATTGAGATGTCAGTGACATCGTTTATAGAGCATAACTTAGATTGTCATCTACATTACTGTAACTACAAATGCCACCCTCAGATTGAAGAATCAGTTTTATCAGTAAACATCTCTAATTGAACTATAAATGGTGTATGTCTTCTGGCTTTTACAAGCTCTTGGTCTAACACAGGGGATATATGACGTAAA-AATTACAAAGCAAGGCGAC
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471744 236 - 192599291 GCTTTTAAAAAA-TTAAAGTTAGCTGTAGATTGAGATGTCAGTGACACAGTTTATAGAACATAACTTAGATTGTCATCTACATTACTGTAACTACAAATGCCACCCTCAGATTGAAGAATCAGTTTTATCAGTAAACATCTCTAATTGAACTATACATAGTGTGTGTCTTCTGGCTTTTACAAGCTCTTGGTCTAACACAGGGGATATATGATGTAAA-AATTACAAAGCAAggccaa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310089 236 + 192460366 GCTTTTAAAAAA-TTAAAGTTAGCTGTAGATTGAGATGTCAGTGACACAGTTTATAGAACATAACTTAGATTGTCATCTACATTACTGTAACTACAAATGCCACCCTCAGATTGAAGAATCAGTTTTATCAGTAAACATCTCTAATTGAACTATACATAGTGTGTGTCTTCTGGCTTTTACAAGCTCTTGGTCTAACACAGGGGATATATGATGTAAA-AATTACAAAGCAAggccaa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281386 236 - 187378091 gcttttaaaaaa-ttaaagttagctGTAGATTGAGATGTCAGTGACACAGTTTATAGAACATAACTTAGATTGTCATCTACATTACTGTAACTACAAATGCCACCCTCAGATTGAAGAATCAGTTTTATCAGTAAACATCTCTAATTGAACTATACATAGTGTGTGTCTTCTGGCTTTTACAAGCTCTTGGTCTAACACAGGGGATATATGATGTAAA-AATTACAAAGCaaggccat
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175268 236 + 101219884 GCTTTTAAAAAA-TTAAAGTTAGCTGTAGATTGAGATGTCAGTGACACAGTTTATAGAACATCACTTAGATTGTCATCTGCATTGCTGTAACTACAAATGCCACCCTCAGATTGAAGAATCACTTTTATCAGCAAACATCTCTCATTGAACTATATATAGTGTGTGTCTTCTGGCTTTTACAAGCTCTTGGTCTAACACAGGGGATATAGGATGTAAA-AATTACAAAGCAAggccaa
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11120981 232 +  39895921 GCTTTTAAAAAAGTTAAGTTTCACTACAAATTGAGGTATATGTGGTGCACATCATAGAACTTAAT---AAT--TCATCTATACTACTGGAACTGTGAATGTCACTCCCAGATTGAAGAGTCAG-TTAATCAGTAAACATCACTAATGGaaagatgaatagtttataacttctgacttcgaagggctcttggtctaatacaggagataggtgatgtgaacaattgcaaagaaaaatcat
i canFam3.chr31                   C 0 I 334
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=7076.000000
s hg38.chr14_KI270722v1_random        35593 5 +    194050 gcacg
s panTro4.chr3                    125125159 5 - 202329955 gcgca
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10188 5 +    139590 gcgcg
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471980 5 - 192599291 gcgcg
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310325 5 + 192460366 gcgcg
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281622 5 - 187378091 gcatg
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175504 5 + 101219884 gcgtg
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18034849 8918 -  38779656 I
e canFam3.chr31                    11121213 334 +  39895921 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=1428.000000
s hg38.chr14_KI270722v1_random        35598 2 +    194050 gt-
s panTro4.chr3                    125125164 2 - 202329955 gt-
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10193 2 +    139590 gt-
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471985 2 - 192599291 gt-
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310330 2 + 192460366 gt-
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281627 2 - 187378091 gt-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175509 2 + 101219884 gt-
i chlSab2.chr22                   C 0 C 0
s otoGar3.GL873528                 18043767 2 -  38779656 -tt
i otoGar3.GL873528                I 8918 I 2798
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e canFam3.chr31                    11121213 334 +  39895921 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=71109.000000
s hg38.chr14_KI270722v1_random        35600 39 +    194050 ggctcatgcctgtaatcccagcactttgggaggccaagg
s panTro4.chr3                    125125166 39 - 202329955 ggctcacgcctgtaatcccagcactttgggagtccgagg
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10195 39 +    139590 ggctcacgcctgtaatcccagcactttgggatgcctagg
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192471987 39 - 192599291 ggctcaggcctgtaatcccagcactttgggaggccaagg
i rheMac3.chr2                    C 0 I 213
s macFas5.chr2                    192310332 39 + 192460366 ggctcaggcctgtaatcccagcactttgggaggccaagg
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281629 39 - 187378091 ggctcacgcctgtaatcccagcactttgggaggccgagg
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175511 39 + 101219884 ggctcaggcctgtaatcccagcactttgggaggccgagg
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11121213 334 +  39895921 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=282222.000000
s hg38.chr14_KI270722v1_random        35639 229 +    194050 tgggcggatctcaaggtcaggagatcgagatcatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaattatctgggtgtggtggcacacgtctgtagtccaagctactcagcaggctgaggcaggagaatcgtttgaacccaggatgcggaggttgcagtgagctgagatcgcaccactgcactccagcctggtggcagaacaagactccatctcaa
s panTro4.chr3                    125125205 229 - 202329955 cgggcggatcacaaggtcaggagatagagatcatcctggctaacacggtgaatccccatctctactaaaaatacaaaaattagctgggtgtggtggcacaggcctgtagtcccagctactcaggagggtgaggcaggagaatcgcttgaacccaagatgcggaggttacagtgagccgagatggcaccactgcactccagcctggtggcagaacaggacaccatctcaa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10234 229 +    139590 cgggcggatcacaaggtcgggagaccaagatcatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcacacgcttgtagtcccagctactcaggaggctgagactggagaattgcttgaacccaagatgcagaggttacagtgagccgagattgcaccactgcactccagcctggtggcagaataagactgcatctcat
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192310371 229 + 192460366 cgggtggatcacgaggtcaggagatcaagaccatcctggctgacatggtaaaaccccatctctactaaaaatacaaaaattagctgagtgtggtggcacatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggacgcggaggttgcagtgagccgagatcccaccactgcactccagcctggcggcagaacaagactccatttcat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281668 229 - 187378091 cgggcggatcatgaggtcaggagatcgagaccatcctggctgacatggtaaaaccccatctctactaaaaatacaaaaattagctgagtgtggtggcgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggacgcagaggttgtagtgagccgagatcccaccactgcactccagcctggcggcagaacaagactccatctcat
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175550 229 + 101219884 cgtgcagatcccgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaattagctgagtgtagtggtgcatgcctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaacccaggacgcggaggttgcagtgagccgagatcccaccacagcactccagcctggcggcagaacaagactccatctcat
i chlSab2.chr22                   C 0 I 4
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11121213 334 +  39895921 I
e gorGor3.chr3                    122167741 589 - 199944510 I
e rheMac3.chr2                    192472026 213 - 192599291 I

a score=40469.000000
s hg38.chr14_KI270722v1_random        35868 29 +    194050 aaataaataaataaataaataaataaata
s panTro4.chr3                    125125434 17 - 202329955 ------------aaacaaacaaacaaaca
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10463 29 +    139590 aaataaataaataaataaataaataaata
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472239 29 - 192599291 aaataaataaataaataaataaataaata
i rheMac3.chr2                    I 213 C 0
s macFas5.chr2                    192310600 29 + 192460366 aaataaataaataaataaataaataaata
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281897 25 - 187378091 ----aaataaataaataaataaataaata
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175783 29 + 101219884 aaataaacaaataaataaataaataaata
i chlSab2.chr22                   I 4 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11121213 334 +  39895921 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=85348.000000
s hg38.chr14_KI270722v1_random        35897 60 +    194050 aataaataaataataaaATAGCAATGACTataatg-ttttgtgatgttaaactttgagagc
s panTro4.chr3                    125125451 60 - 202329955 aataaataaaTAATAAAATAGCAGTGACTataatg-ttttgtgatgttaaactttgagagc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10492 55 +    139590 aataaataaat-----aaTAGCAGTGACTataatg-ttttgtgatgttaaactttgagagc
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472268 53 - 192599291 aataaataaataa------aACAgtgactgtaatg-ttttgtgatgttaaactttgagag-
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310629 53 + 192460366 aataaataaataa------aACAgtgactgtaatg-ttttgtgatgttaaactttgagag-
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281922 51 - 187378091 aataaataaat--------aacagtgacTGTAATG-TTTTGTGATGTTAAactttgagag-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175812 55 + 101219884 aataaataaataa----ataaCAgtgactgtaatg-ttttgtgatgttaaactttgagat-
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121547 59 +  39895921 TATCACTGAATACTACAAATATAGTGATTACGGTGTTTTTATGATGTTAATTCTGGGGC--
i canFam3.chr31                   I 334 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19605689 588 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=8852.000000
s hg38.chr14_KI270722v1_random        35957 3 +    194050 ttt
s panTro4.chr3                    125125511 3 - 202329955 ctt
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19606277 3 -  19803153 ttt
i panPan1.JH650580                I 588 I 1896
s nomLeu3.chr21_GL397661_2_random     10547 3 +    139590 ttt
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472321 3 - 192599291 ttt
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310682 3 + 192460366 ttt
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281973 3 - 187378091 ttt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175867 3 + 101219884 ttt
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121606 3 +  39895921 TTT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122167741 589 - 199944510 I

a score=5671.000000
s hg38.chr14_KI270722v1_random        35960 7 +    194050 ttttttc---
s panTro4.chr3                    125125514 3 - 202329955 ttt-------
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122168330 7 - 199944510 tttttcc---
i gorGor3.chr3                    I 589 I 124
s nomLeu3.chr21_GL397661_2_random     10550 7 +    139590 ttttttc---
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472324 7 - 192599291 ttttttc---
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310685 7 + 192460366 ttttttc---
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281976 7 - 187378091 ttttttc---
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175870 7 + 101219884 ttctttc---
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121609 7 +  39895921 ---CCCCACC
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I

a score=245201.000000
s hg38.chr14_KI270722v1_random        35967 124 +    194050 ----tttcttttcccaagtc-cctttcccagttccagaagcagagttattctaagctcactgatgtaaacgaatagaaagaaaaggtttggtgg--aaa-aactaataacttgctgtcctttctgtcttttg
s panTro4.chr3                    125125517 124 - 202329955 ----tttcttttcccaagtc-cctttcccagttccaggagt--agttactctaagctcactgatgtgaaggaatagaaagaaaaggtttggtggaaaaa-aaataataacctgctatcatttctgtcttttg
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10557 124 +    139590 ----tttcttttcccaagtc-cctttcccagttccaggagcagcgttattctaagctcattgatgtaaaggaatagaaagaaaaggttgggtgg--aaa-aaataataacctgctatcatttctgtcttttg
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472331 124 - 192599291 ----tttcttttcccaagtc-cctttcccaattccaggagcagagttattctaagctcattgatgtaaaggaatagaaagaaaagatttagtgg--aaa-aaataacaacctgctattatttctgtcttttg
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310692 124 + 192460366 ----tttcttttcccaagtc-cctttcccaattccaggagcagagttattctaagctcattgatgtaaaggaatagaaagaaaagatttagtgg--aaa-aaataacaacctgctattatttctgtcttttg
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187281983 124 - 187378091 ----tttcttttcccaagtc-ccttttccaattccaggAGCAGAGTTATTCTAAGCTCCTTGATGTAAACGAATAGAAGGAAAAGATTTCATGG--AAA-AAATAACAACCTGctattatttctgtcttttg
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101175877 124 + 101219884 ----tttcttttcccaagtc-cctttcccaattccaggagcagagttattctaagctcattgatgtaaaggaatagaaagaaaagatttcgtgg--aaa-aaataataacctgctattatttctgtcttttg
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121616 129 +  39895921 CCCTAGTATTTTTCTAGGTCTTCTTGTCCAGTTGCAGGAGCAAAGTGATTC-GGGTTCACTGATTTTGAGGAATGAAAAGAAAACATTTCATGg--aaaggaatagtaacctatgattttttctgacttttg
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168337 124 - 199944510 I

a score=-1309.000000
s hg38.chr14_KI270722v1_random        36091 1 +    194050 -t
s gorGor3.chr3                    122168461 1 - 199944510 -t
i gorGor3.chr3                    I 124 I 154
s nomLeu3.chr21_GL397661_2_random     10681 1 +    139590 -t
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472455 1 - 192599291 -t
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310816 1 + 192460366 -t
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282107 1 - 187378091 -t
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176001 1 + 101219884 -t
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121745 1 +  39895921 a-
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e panTro4.chr3                    125125641 0 - 202329955 C

a score=147929.000000
s hg38.chr14_KI270722v1_random        36092 71 +    194050 tttttaaaagcttgagcatttgggagaatttggaaagattgtggagtaagtgcaaagaaggaatt-tgctaa--------------
s panTro4.chr3                    125125641 71 - 202329955 tttttaaaagcttgaggatttgggagaatttggaaagactgtggagtaagtgcaaagaaggaatt-cgctaa--------------
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10682 71 +    139590 tttttaaaagcttgagcatttgggagaatttggaaagattgtggagtaagtgcaaagaaggaatt-tgctaa--------------
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472456 71 - 192599291 tttttaaaagcttgagcatttgggagaatttggaaagattgtggaataagtgcaaagaaggaatt-tgctaa--------------
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310817 71 + 192460366 tttttaaaagcttgagcatttgggagaatttggaaagattgtggaataagtgcaaagaaggaatt-tgctaa--------------
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282108 71 - 187378091 tttttaaaagcttgagCATTTGGGAGAATTTGGAAAGATTGTGGAATAAGTGCAAAGAAGGAATT-TGCTAA--------------
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176002 71 + 101219884 tttttaaaagcttgagcatttgggagaatttggaaagattgtggaataagtgcaaagaaggaatt-tgctaa--------------
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121746 86 +  39895921 cttctaaaaacttaaggcttagggagaatttaaaagaatcatggaactgttggaaaaaaagtattatgatgaaggagaaacactga
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  11313 14493 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=-825.000000
s hg38.chr14_KI270722v1_random        36163 1 +    194050 a
s panTro4.chr3                    125125712 1 - 202329955 c
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10753 1 +    139590 c
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472527 1 - 192599291 g
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310888 1 + 192460366 g
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282179 1 - 187378091 G
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176073 1 + 101219884 g
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE928251v1                  25806 1 +     87482 g
i tarSyr2.KE928251v1              I 14493 I 52
s canFam3.chr31                    11121832 1 +  39895921 a
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=11032.000000
s hg38.chr14_KI270722v1_random        36164 5 +    194050 aaaaa
s panTro4.chr3                    125125713 5 - 202329955 aaaaa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10754 5 +    139590 aaaaa
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472528 5 - 192599291 aaaaa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310889 5 + 192460366 aaaaa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282180 5 - 187378091 AAAAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176074 5 + 101219884 aaaaa
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11121833 5 +  39895921 aagag
i canFam3.chr31                   C 0 I 167
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  25807 52 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=12813.000000
s hg38.chr14_KI270722v1_random        36169 8 +    194050 ttatatag
s panTro4.chr3                    125125718 7 - 202329955 -tatgtat
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10759 8 +    139590 ttatatag
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472533 8 - 192599291 ttatacag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310894 8 + 192460366 ttatacag
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282185 8 - 187378091 TTATATAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176079 8 + 101219884 ttatatag
i chlSab2.chr22                   C 0 I 184
s canFam3.chr31                    11122005 8 +  39895921 TCataaat
i canFam3.chr31                   I 167 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  25807 52 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=47747.000000
s hg38.chr14_KI270722v1_random        36177 29 +    194050 ggtaaaatga---------------------------------------gttttttccaggttagaaa-
s panTro4.chr3                    125125725 29 - 202329955 ggtaaaatga---------------------------------------gttttttccaggttagaaa-
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10767 29 +    139590 ggtaaaatga---------------------------------------attttttccaggttagaaT-
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472541 29 - 192599291 ggtaaaatga---------------------------------------gatttttccaggttagaaa-
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310902 29 + 192460366 ggtaaaatga---------------------------------------gatttttccaggttagaaA-
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282193 29 - 187378091 GGTAAAATGA---------------------------------------GATTTTTCCAGGTTAGAAA-
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176271 29 + 101219884 GGTAAAATGA---------------------------------------GATTTTTCCAGGTTAGAAA-
i chlSab2.chr22                   I 184 C 0
s canFam3.chr31                    11122013 65 +  39895921 ----aaataaataaataaataaataaataaataaataaataaatGGCACATTTTCCCCAGATTAGGAAA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE928251v1                  25807 52 +     87482 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=6832.000000
s hg38.chr14_KI270722v1_random        36206 3 +    194050 ata
s panTro4.chr3                    125125754 3 - 202329955 ata
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10796 3 +    139590 ATA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472570 3 - 192599291 ata
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310931 3 + 192460366 ATA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282222 3 - 187378091 ATA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176300 3 + 101219884 ATA
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE928251v1                  25859 3 +     87482 aaa
i tarSyr2.KE928251v1              I 52 N 0
s canFam3.chr31                    11122078 3 +  39895921 AAA
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=69004.000000
s hg38.chr14_KI270722v1_random        36209 37 +    194050 tccactccctacactcctacattcctttcccatgttt
s panTro4.chr3                    125125757 37 - 202329955 tccactccctacacccctacattcctttcccatggtt
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10799 37 +    139590 TCCACTCCCTACACTCCTATATTCCTTTCCCATAGTT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472573 36 - 192599291 tctactccctacactcctacgttccttt-ccacggtt
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310934 36 + 192460366 TCTACTCCCTACACTCCTACGTTCCTTT-CCACGGTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282225 36 - 187378091 TCTACTCCCTACACTCCTACATTCCTTT-CCACGGTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176303 37 + 101219884 TCTACTCCCTGCACTCCTATGTTCATTTCCCACAGTT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11122081 37 +  39895921 TCTACTCTCCACACCTCTACATTCCATCTCTGTGGTT
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168462 154 - 199944510 I

a score=7042.000000
s hg38.chr14_KI270722v1_random        36246 3 +    194050 aag
s gorGor3.chr3                    122168616 3 - 199944510 aag
i gorGor3.chr3                    I 154 I 158
s nomLeu3.chr21_GL397661_2_random     10836 3 +    139590 AAG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472609 3 - 192599291 aag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310970 3 + 192460366 AAG
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282261 3 - 187378091 AAG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176340 3 + 101219884 AAG
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11122118 3 +  39895921 GAG
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e panTro4.chr3                    125125794 0 - 202329955 C

a score=104492.000000
s hg38.chr14_KI270722v1_random        36249 66 +    194050 aagaggaaaaaacg-aaggcctcttggtgagcagtcgtgacttcg---gcagtttcttagaaatattgta
s panTro4.chr3                    125125794 61 - 202329955 aagaggaaaaagca-aaggcctcttggtgagcagtggtga--------gcagtttcttagaaatattcta
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10839 65 +    139590 AAGAGGAAAAAGCA-AAGGCCTCTTGGTGAGCAGTGGTGACTTAG---GCAGTTTCTTAG-TATATTCTA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472612 54 - 192599291 ---------aagca-aaggcctcttggtgagcagtggtgacttag---gcagt---ttagaaatattcta
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192310973 54 + 192460366 ---------GAGCA-AAGGCCTCTTGGTGAGCAGTGGTGACTTAG---GCAGT---TTAGAAATATTCTA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282264 57 - 187378091 ---------AAGCA-AAGGCCTCTTGGTGAGCAGTGGTGACTtag---gcagtttcttagaaatattCTA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176343 57 + 101219884 ---------AAGCA-AAGGCCTCTTGGTGAGCAGTGGTGACTTAG---GCAGTTTCTTAGAAATATTCTA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11122121 70 +  39895921 Aggaggggaaaacagaaggttccttgatcagcagtggagacctagaaagcaatttcctagaaatatccca
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168619 158 - 199944510 I

a score=-880.000000
s hg38.chr14_KI270722v1_random        36315 1 +    194050 -g
s panTro4.chr3                    125125855 1 - 202329955 -g
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10904 1 +    139590 -G
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472666 1 - 192599291 -g
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192311027 1 + 192460366 -G
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282321 1 - 187378091 -G
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176400 1 + 101219884 -G
i chlSab2.chr22                   C 0 C 0
s nasLar1.chrUn_JMHX01266407v1           42 1 +      2468 -G
i nasLar1.chrUn_JMHX01266407v1    N 0 I 91
s canFam3.chr31                    11122191 1 +  39895921 t-
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168619 158 - 199944510 I

a score=165271.000000
s hg38.chr14_KI270722v1_random        36316 96 +    194050 aaggcatagtcatcttt-----aaaaaaaaatagctacaaggatatgtctaagcagaagggaccatgggccaaattacgtgtagatttttgcattccaaat
s panTro4.chr3                    125125856 96 - 202329955 aaggcatagtcatcttt-----aaaaaaaaatagctacaaggatatgtctaagcagaagagaccatgggccaaattacaagtagatttttgcattccaaac
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     10905 95 +    139590 AAGGCATAGTCATCTTT------Taaaaaaatagctacaaggatatgtctaagcagaagggaccatgggccaaattacgagtagatttttgcattccaaat
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472667 91 - 192599291 aaggtatcgtcatcttt----------aaaatagctacaaggatatgtctaagcagaagggaccatgggagaaattactagtatatttttgcattccaaat
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192311028 91 + 192460366 AAGGAATCGTCATCTTT----------AAaatagctacaaggatatgtctaagcagaagggaccatgggagaaattactagtatatttttgcattccaaat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282322 91 - 187378091 AAGGAATCGTCATCTTT----------AAAATAGCTACAAGGATATATCTAAGCAGAAGGGACCATGGGAGAAATTACTAGTATATTTTTGCATTCCAAAT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176401 91 + 101219884 AAGGAATCGTCATCTTT----------AAaatagctacaaggatatgtctaagcagaagggaccatgggccaaattactagtatatttttgcattccaaat
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11122192 99 +  39895921 gagatctaaatgtcccagaaaaaaaataaaaaaactacaatg--gtgtttaggcagaagcggccatcaggagactcatgagaggatttttatgctcccaat
i canFam3.chr31                   C 0 C 0
e nasLar1.chrUn_JMHX01266407v1           43 91 +      2468 I
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168619 158 - 199944510 I

a score=3276.000000
s hg38.chr14_KI270722v1_random        36412 1 +    194050 a
s gorGor3.chr3                    122168777 1 - 199944510 a
i gorGor3.chr3                    I 158 I 1454
s nomLeu3.chr21_GL397661_2_random     11000 1 +    139590 a
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472758 1 - 192599291 a
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192311119 1 + 192460366 a
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282413 1 - 187378091 A
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176492 1 + 101219884 a
i chlSab2.chr22                   C 0 C 0
s nasLar1.chrUn_JMHX01266407v1          134 1 +      2468 a
i nasLar1.chrUn_JMHX01266407v1    I 91 I 1113
s canFam3.chr31                    11122291 1 +  39895921 a
i canFam3.chr31                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e panTro4.chr3                    125125952 0 - 202329955 C

a score=702054.000000
s hg38.chr14_KI270722v1_random        36413 357 +    194050 tggtaaagaagaagcaggaagctggggggcctaaacaagccacacagaaatggacaaggaagaggccagcagcagcttgtgggggcaagacgtcaagccccgaatgttaaacccaccatccatcctccaaattctggctctgtttaaCAAGgctgtggtctgaca-ctagatgccgcctccgtgact----aaagcataattc-cccttctcctgggagtgtt------gacagctgactcctgtcaacaatactcacagcacagtaaagttccttcatccaagtccatgtcccttctcaaggcatcccacatccgagaactgcttggtacagaaatataatggccttgtttgcttgctccaattcgag
s panTro4.chr3                    125125952 357 - 202329955 tggtaaagaagcagcaggaagccagtgggcctaaacaggccacacagaaatggacaaggaagaggccagcagcagcttgtggggacaagacgtcaagccccaaatgttaaacccaccatccatcctccacattctggctctgtttaaCAAGGGtgtggtctggca-ctagatgccacctcagtgact----aaagcataattc-cccgtctcctaggagtgtt------gacagctgactcctggcaacaatactcacagcacagtaaagttccttcatccaagttcatgtgccttctcaaggcatcccacatccgagaactgcttggtacagaaatataatggcctggcttgcgtgctccaatttgag
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     11001 360 +    139590 tggtaaaga---agcaggaagctggtgggcctaaacaggccacacagaaatggacaaggaagaggccagcagcagcttgtggggacAAGATGTCAAGCCCCAAATGTTAAACCCACCATCCATCCTCCAAATTCTGGCTCTGTTTAACAAGgctgtggtctggca-ctaggtgccgcctcagtgact----aaagcataattt-cccgtctcctgggagtgttgatgtcgacagctgactccaggtaacaatactcacagcacagtaaagttccttcatccaagttcatgtcccttctcaagacatccgacacttgagaactgcttggtacagaaatataatggcctggcttgcttgcttcaatttgag
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192472759 361 - 192599291 caggaaagaagcagcaggaagctcgtgggcctaaacaggcctcacagaagtggacaaggaagaggccagcagcagcttgtgaggacAAGAAGTCAAGCCCCAAATGTTAAACCCACCGTCCATCCTCCAAATTCTGGCTCTTTTTAACAAGgccgtgatctggca-ctagatgcctcctcagtgactaaagaaagcatcattc-gccctctcctgggagtgct------gacagctgactcctggcaataatactcacagcacagtaaagttccttcatccaagttcatgtcccttctcagggcatcccacatccgaggactgcttggtacagaaatataatggcttggcttccttgctccaatttgag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192311120 361 + 192460366 caggaaagaagcagcaggaagctcgtgggcctaaacaggcctcacagaagtggacaaggaagaggccagcagcagcttgtgaggacAAGAAGTCAAGCCCCAAATGTTAAACCCACCGTCCATCCTCCAAATTCTGGCTCTTTTTAACAAGgccgtgatctggca-ctagatgcctcctcagtgactaaagaaagcatcattc-gccctctcctgggagtgct------gacagctgactcctggcaataatactcacagcacagtaaagttccttcatccaagttcatgtcccttctcagggcatcccacatccgaggactgcttggtacagaaatataatggcttggcttccttgctccaatttgag
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282414 360 - 187378091 TGGTAAAGAAGCAGCAGGAAGCTGGTGGGCCTAAACAGGTCTCACAGAAATGGACAAAGAAGAGGCCAGCAGCAGCTTGTGAGGAC-AGAAGTCAAGCCCCAAATGTTAAACCCACCGTCCATCCTCCAAATTCTGGCTCTTTTTAACAAGGCCATGGTCTGGCA-CTAGATGCCTCCTCAGTGACTAAAGAAAGCATCATTC-GCCGTCTCCTGGGAGTGCT------GACAGCTGACTCCTGGCAATAATACTCACAGCACAGTAAAGTTCCTTCATCCAAGTTCATGTCCCTTCTCAGAGTATCCCACATCCGAGGACTGCTTGGTACAGAAATATAATGGCCTGGCTTCCTTGCTCCAATTTGAA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176493 361 + 101219884 tggtaaagaagaagcaggaagctggtgggcctaaacaggcctcacagaaatggacaaggaagaggccagcagcagcctgtgaggacAAGAAGTCAAGCCCCAAATGTTAAACCCACCGTCCATCCTCCAAATTCTGGCTCTTTTTAACAAGgccgtggtctggca-ctagatgcctcctcagtgactaaagaaagcatcattc-gccgtctcctgggagtgtt------gacagctgactcctggcaataatactcacagcacagtaaagttccttcatccaagttcatgtcccttctcagggcaccccacatccgaggactgcttggtacagaaatataatggcctggcttccgtgctccaatgtgag
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11122292 350 +  39895921 tgagaaagaaccaacagtgggcttgtgggcctcattgagccatgtgggaatggacaaaggagagaccaacaatggcttgtgtggacaggtggtcag----ctaaggacctaactaccatccatctcccacactctggctctgcttaCCAAGgctgtgctctaccacccagaggccttcatcaggact----aaagcagcattctcccagcttctagggctgct------gacagctgactccttgcagtaatg-tcacagctgaatatgaatatctcatccaagttcata-aacttctaagag---accatatccaaaggctggacaatgtagttacataaagttctggctcctttacaccaatttagg
i canFam3.chr31                   C 0 I 681
e nasLar1.chrUn_JMHX01266407v1          135 1113 +      2468 I
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=1275316.000000
s hg38.chr14_KI270722v1_random        36770 739 +    194050  
s panTro4.chr3                    125126309 741 - 202329955  
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     11361 743 +    139590  
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192473120 799 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192311481 745 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187282774 752 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101176854 755 + 101219884  
i chlSab2.chr22                   C 0 C 0
e nasLar1.chrUn_JMHX01266407v1          135 1113 +      2468 I
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=4011.000000
s hg38.chr14_KI270722v1_random        37509 2 +    194050 ct
s nomLeu3.chr21_GL397661_2_random     12104 2 +    139590 ct
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192473919 2 - 192599291 ct
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312226 2 + 192460366 ct
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283526 2 - 187378091 CT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177609 2 + 101219884 ct
i chlSab2.chr22                   C 0 C 0
s nasLar1.chrUn_JMHX01266407v1         1248 2 +      2468 ct
i nasLar1.chrUn_JMHX01266407v1    I 1113 I 160
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e panTro4.chr3                    125127050 0 - 202329955 C
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=281720.000000
s hg38.chr14_KI270722v1_random        37511 160 +    194050 ctcttgccctgaatgtactttaatttatgtcaattgatgttgcatatagagatcatcaaagtcaagctacaagaaaaagaggaacataacttaacaaagacttagaggattagtcctaatagtgtgaaatcaaaatttcaagtgagggaataaatacagc
s panTro4.chr3                    125127050 160 - 202329955 ctcttgccctgaatgtactttaatttatgtcaattgatgttgcatatagagatcatcagagtcaagctacaagaaaaggaggaacataacttagcaaagacttagaggattagtcttaatagtgtgaaatcaaaatttcaagtgagggaataaatgcagc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12106 159 +    139590 ctcttgccctgaatgtactttaatttatgtcaattgatgttgcatatagagatcatcagagtcaagctacaagaaaa-gaggaacattacttagcaaagacttagaggattagtcctaatagtgtgaaatcaaaatttcaactttgggaataaatgcagc
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192473921 160 - 192599291 ctcttgccctgaatatactttaatttacatcaattgatgttgcgtatagagatcatcagagtcaagcaataagaaaagcagaaacttaacttagcaaagacttagaggattagtcctaatagtgtgaaatcaaaatttcaagtgagggaataaatgcagc
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312228 160 + 192460366 ctcttgccctgaatatactttaatttacatcaattgatgttgcgtatagagatcatcagagtcaagcaataagaaaagcagaaacttaacttagcaaagacttagaggattagtcctaatagtgtgaaatcaaaatttcaagtgagggaataaatgcagc
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283528 159 - 187378091 CTCTTGCCCTGAATATACTTTAATTTACATCAATTGATGTTGCGTATACAGATCATCAGAGTCAAGcaataagaaaaggagaaacttAACTTAGCAAAGACTTAGAGGATTAGTCCT-ATAGTGTGAAATCAAAATTTCAAGTGAGGGAATAAATGCAGC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177611 160 + 101219884 ctcttgccctgaatatactttaatttatatcaattgatgttgcgtatagagatcatcagagtcaagcaataagaaaaggagaaacttaacttagcaaagacttagaggattagtcctaagagtgtgaaatcaaaatttcaagtgagggaataaatgcagc
i chlSab2.chr22                   C 0 C 0
e nasLar1.chrUn_JMHX01266407v1         1250 160 +      2468 I
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=1911.000000
s hg38.chr14_KI270722v1_random        37671 1 +    194050 t
s nomLeu3.chr21_GL397661_2_random     12265 1 +    139590 t
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474081 1 - 192599291 t
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312388 1 + 192460366 t
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283687 1 - 187378091 T
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177771 1 + 101219884 t
i chlSab2.chr22                   C 0 C 0
s nasLar1.chrUn_JMHX01266407v1         1410 1 +      2468 t
i nasLar1.chrUn_JMHX01266407v1    I 160 N 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e panTro4.chr3                    125127210 0 - 202329955 C
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=25116.000000
s hg38.chr14_KI270722v1_random        37672 14 +    194050 tttaataattactt
s panTro4.chr3                    125127210 14 - 202329955 tttaatgattacgt
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12266 14 +    139590 tttaatgattactt
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474082 14 - 192599291 tttaatgattactt
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312389 14 + 192460366 tttaatgattactt
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283688 14 - 187378091 TTTAATGATTACTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177772 14 + 101219884 tttaatgattactt
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_84608               4598 16560 +      5045 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=2548.000000
s hg38.chr14_KI270722v1_random        37686 1 +    194050 a
s panTro4.chr3                    125127224 1 - 202329955 a
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12280 1 +    139590 a
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474096 1 - 192599291 a
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312403 1 + 192460366 A
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283702 1 - 187378091 A
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177786 1 + 101219884 A
i chlSab2.chr22                   C 0 C 0
s micMur1.scaffold_3530              117662 1 +    180192 a
i micMur1.scaffold_3530           I 16560 I 6
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=3822.000000
s hg38.chr14_KI270722v1_random        37687 2 +    194050 aa
s panTro4.chr3                    125127225 2 - 202329955 aa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12281 2 +    139590 aa
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474097 2 - 192599291 aa
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312404 2 + 192460366 AA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283703 2 - 187378091 AA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177787 2 + 101219884 AA
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              117663 6 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=-1309.000000
s hg38.chr14_KI270722v1_random        37689 1 +    194050 -t
s panTro4.chr3                    125127227 1 - 202329955 -t
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12283 1 +    139590 -t
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474099 1 - 192599291 -t
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312406 1 + 192460366 -T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283705 1 - 187378091 -T
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177789 1 + 101219884 -T
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE939166v1                   1788 1 -    119440 a-
i tarSyr2.KE939166v1              N 0 I 5
e micMur1.scaffold_3530              117663 6 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=1883.000000
s hg38.chr14_KI270722v1_random        37690 1 +    194050 g
s panTro4.chr3                    125127228 1 - 202329955 g
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12284 1 +    139590 g
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474100 1 - 192599291 g
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312407 1 + 192460366 G
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283706 1 - 187378091 G
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177790 1 + 101219884 G
i chlSab2.chr22                   C 0 C 0
s micMur1.scaffold_3530              117669 1 +    180192 A
i micMur1.scaffold_3530           I 6 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e tarSyr2.KE939166v1                   1789 5 -    119440 I
e otoGar3.GL873528                 18043769 2798 -  38779656 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=-6156.000000
s hg38.chr14_KI270722v1_random        37691 1 +    194050 -c
s panTro4.chr3                    125127229 1 - 202329955 -a
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12285 1 +    139590 -a
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474101 1 - 192599291 -a
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312408 1 + 192460366 -A
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283707 1 - 187378091 -A
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177791 1 + 101219884 -A
i chlSab2.chr22                   C 0 C 0
s tarSyr2.KE939166v1                   1794 1 -    119440 -a
i tarSyr2.KE939166v1              I 5 N 0
s micMur1.scaffold_3530              117670 1 +    180192 T-
i micMur1.scaffold_3530           C 0 I 3845
s otoGar3.GL873528                 18046567 1 -  38779656 T-
i otoGar3.GL873528                I 2798 N 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=303735.000000
s hg38.chr14_KI270722v1_random        37692 175 +    194050 agtttacctctagcaggatctacaagaaattggcaac--ctttggcttcagtaacagaaactcaggatatatgcccttcagtgcttttgcattctgcatcatattgagagagactcctttaaac-agcaataagaaacttcctgtgacaacataataaattcaaaaagttctgtaact
s panTro4.chr3                    125127230 176 - 202329955 agtttaactgtagcaggatctacaagaaattggcaac--ctttggcttcagtaacagaaactcaggctgtatgcccttcagtgcttttggattctgcatcatattgagagagactcctttaaacaagcaataggaaacttcctgtgacaacataataaattcaaaaagttctgtaact
i panTro4.chr3                    C 0 I 4
s nomLeu3.chr21_GL397661_2_random     12286 175 +    139590 agtttaactctagcaggatcttcaagaaattggcaac--ctttggcttcattaacagaaactcaggatatatgcccttcagtgcttttg-attctgcatcatattgagagagactccattaaacaagcaataggaaacttcctgtgacaacataataaattcaaaaagttctgtaact
i nomLeu3.chr21_GL397661_2_random C 0 I 4
s rheMac3.chr2                    192474102 178 - 192599291 agtttaactccggcaggctctccaagaaatcggcaacagctttagcttcagtaccagaaactcagcatatatgcccttcagtgcttttggattctgcatcatattgagagagaatcctttaaacaagcaacaggaaatttcctgtgacaacataataaattcaaaaagttctgtagct
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312409 178 + 192460366 AGTTTAACTCCGGCAGGCTCTCCAAGAAATCGGCAACAGCTTTAGCTTCAGTACCAGAAACTCAGCATATATGCCCTTCAGTGCTTTTGGATTCTGCATCATATTGAGAGAGAATCCTTTAAACAAGCAACAGGaaatttcctgtgacaacataataaattcaaaaagttctgtagct
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187283708 178 - 187378091 AGTTTAACTCCGGCAGGCTCTACAAGAAATTGGCAACAGCTTTAGCTTCAGTACCAGAAACTCAGCATATATGCCCTTCAGTGCTTTTGGATTCTGCATCATATTGAGAGAGAATCCTTTAAACAAGCAATAGGAAATTTTCTGTGACAACATAATAAATTCAAAAAGTTCTGTAGCT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101177792 178 + 101219884 AGTTTAACTCCAGCAGGCTCTCCAAGAAATTGGCAACAGCTTTAGCTTCAGTACCAGAAACTCAGCATATATACCCTTCAGTGCTTTTGGATTCTGCATCATATTGAGAGAGAATCCTTTAAACAAGCAATAGGaaattttctgtgacaacataataaattcaaaaagttctgtagct
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19606280 1896 -  19803153 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122168778 1454 - 199944510 I

a score=3600.000000
s hg38.chr14_KI270722v1_random        37867 1 +    194050 c
s panTro4.chr3                    125127410 1 - 202329955 c
i panTro4.chr3                    I 4 C 0
s panPan1.JH650580                 19608176 1 -  19803153 C
i panPan1.JH650580                I 1896 I 1392
s gorGor3.chr3                    122170232 1 - 199944510 c
i gorGor3.chr3                    I 1454 I 1391
s nomLeu3.chr21_GL397661_2_random     12465 1 +    139590 c
i nomLeu3.chr21_GL397661_2_random I 4 C 0
s rheMac3.chr2                    192474280 1 - 192599291 c
i rheMac3.chr2                    C 0 I 4
s macFas5.chr2                    192312587 1 + 192460366 c
i macFas5.chr2                    C 0 I 4
s papAnu2.chr2                    187283886 1 - 187378091 C
i papAnu2.chr2                    C 0 I 4
s chlSab2.chr22                   101177970 1 + 101219884 c
i chlSab2.chr22                   C 0 I 4
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e canFam3.chr31                    11122642 681 +  39895921 I

a score=299481.000000
s hg38.chr14_KI270722v1_random        37868 172 +    194050 aatttagatagaagtgagaactttggcctataaagccctgttcaacctaaagatggattaaacaatgaaaaagatattgatatcaaaaattcaatcaggaatttgattaaaacatttcattaaatgtgataatTTCttagtatattatcttacatatgcaatattcatgtgt
s panTro4.chr3                    125127411 172 - 202329955 aatttagatagaagtgaggactttggcctagacagccctgttcactctaaagatggattaaacaatgaaaaagatattgatatcaaaaattcaatcaggaatttgattaaagcatttcattaaatgtgataatttcttagtatattatcttacatatgcaatattcatgtgt
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12466 172 +    139590 aatttagatagaagtgaggactttggcctagacagccctgttcactctaaagatggattaaacaatgaaaaagatattgatatcaaaaattcaatcgggaatttgattaaagcatttcattaaatgtgataatTTCTTAGTATATTATCTCACATATGCAATATTCATCTGT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474285 172 - 192599291 aatttagatagaagtgaggactttggcctagacagccctgttcactctaaagatggattaaacaacgagaaaggcaccgctatcaaaaattcagtgaggaatttgattaaagcatttcattaaacttgagaatTTCTCGGTGTATTATCTTACACATGCAATATTCACGTGG
i rheMac3.chr2                    I 4 C 0
s macFas5.chr2                    192312592 172 + 192460366 aatttagatagaagtgaggactttggcctagacagccctgttcactctaaagatggattaaacaacgagaaaggcaccgctatcaaaaattcagtgaggaatttgattaaagcatttcattaaacttgagaatttcttggtgtattatcttacacatgcaatattcacgtgg
i macFas5.chr2                    I 4 C 0
s papAnu2.chr2                    187283891 172 - 187378091 AATTTAGATAGAAGTGAGGACTTTGGCCTAGACAGCCCTGTTCACTCTAAAGatgaattaaacaatgagaaagaCACTGATATCAAAAATTCAATGAGGAATTTGATTAAAGCATTTCATTAAATTTGATAATTTCTTAGTGTATTATCTTACATATGCAATATTCATGTGT
i papAnu2.chr2                    I 4 C 0
s chlSab2.chr22                   101177975 172 + 101219884 aatttagatagaagtgaggactttggcctagacagccctgttcactctaaagatggattaaacaatgagaaagacactgatatcaaaaattcaatgaggaatttgattaaagcatttcattaaatttgataatttcttagtgtattatcttacaaatgcaatattcatgtgt
i chlSab2.chr22                   I 4 C 0
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11122642 681 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=410561.000000
s hg38.chr14_KI270722v1_random        38040 209 +    194050 aacaaattaaatacaagtaaacatttgaccatattatctgcagcataatttacata-tcaatttacatattcagttttgctcacatgaaaacttggatcttctcaataagaaaatATATGAAATCTTTAATTC-----CTCATCCC-----CAGGAATGTAAATAAATAAATATAAATACTGTAAGTCAGTGA-TTTTTTCCTAGGAAGACAGT-----------AAAAATA
s panTro4.chr3                    125127583 220 - 202329955 aacaaattaaatacaagtaaacatttgactatattatctgcagcataatttacata-tcaatttacatattgggttttgctcacatgaaaacttggatcttctcaataagaaaatCTGTGAAATCTTTAATTC-----CTCATCCC-----CAGGAATGTAAATAAGTCAATATAAATACTGTAAGTCAGTGA-TTTTTTCCTAGAAAGACAGTAAAAATTTTACAAAAATA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12638 220 +    139590 AACAAATTAAATACAAGTAAACATTTGACTATATTATCTGCAGCATAATTTACATA-TCAATTTACATATTCAGTTTTGCTCACGTGAAAACTTGGATCTTCTCAAGAAGAAAATTTGTGAAATCTTTAATTC-----CTCATCCC-----CAGAAATGTAAACAAGTCAATATCAATACTGTAAGTCAGTGA-TTTGTTCCTAGGAAGACAGTAAAAATTTTACAAAAATG
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474457 221 - 192599291 AACAAATTAAATACAAGGAAACACTTGGCTATTTTATCTGCAGCATAATTTACATA-TCAATTTGCATATTCAGTTTTGCTCACATGAAAACTTGGATCTTGTCAATAAGAAAATTTGTGAAATATTTAATAC-----CTCATCCC-----CAGGAATGTAAATAAGTCAATGTAAACAGTAAAAGTCAGTGATTTTTTTCCTGGGAAGACAGTAACAATTTTACAAAAATA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312764 221 + 192460366 aacaaattaaatacaaggaaacacttggctattttatctgcagcataatttacata-tcaatttgcatattcagttttgctcacatgaaaacttggatcttgtcaataagaaaatTTGTGAAATATTTAATAC-----CTCATCCC-----CAGGAATGTAAATAAGTCAATGTAAACAGTAAAAGTCAGTGATTTTTTTCCTGGGAAGACAGTAACAATTTTACAAAAATA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187284063 220 - 187378091 AACAAATTAAATACAAGGAAACATTTGACTATTTTATCTGCAGCATAATTTACATA-TCAATTTGCATATTCAGTTTTGCTCACATGAAAACTTGGATCTTGTCAGTAAgaaaatttgtgaaatatttaatac-----CTCATCCC-----CAGGAATGTAAATAAGTCAATGTAAATAGTAAAAGTCAGTGA-TTTTTTCATAGGAAGACAATaacaattttacaaaaata
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101178147 221 + 101219884 aacaaattaaatacaaggaaacatttgactattttatctgcagcataatttacata-tcaatgtgcatattcagttttgctcacatgaaaacttggatcttgtcaataagaaaatTTGTGAAATATTTAATAC-----CTCATCCC-----CAGGAATGTAAATAAGTCAATGTAAACAGTAAAAGTCAGTGATTTTTTTCCTAGGAAGACAGTAACAATTTTGCAAAAATA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11123323 209 +  39895921 aataaat--attataagtagataTTTTAT--TTTTATTCACAGCCTAACTTACCTATTCAATTTATATACTCAATTGTGCTCACATAAAAACCTGAATTTTCTTAATGAGAAAAC---TGAGATTTCTAACCCACTCTCTCCTCCCCCACACAGAGATGTAAGCAGATATATATA---GTTGTGAGTCAATGA--TTTTTCCTAGGAAAAAAGA-----------GAAAATA
i canFam3.chr31                   I 681 I 36
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=255566.000000
s hg38.chr14_KI270722v1_random        38249 152 +    194050 CTTTACACGCCTTCTCATtgtaaacctaaataacaaacagagaaaggctctctaaaggaaaaagacacatcttagggaggagggcactgcaatgggaatatgcatgacaaagcaaactatatagattcaaat-ggtaaaggaagacaaggtct
s panTro4.chr3                    125127803 152 - 202329955 CTTTAGACCCCTTCTCATtgtaaacctaaataacaaacagagaaaggctctttaaaggaaaaagacacatcttagggaggagggcatttcaatgggaatatgcatgacaaagtaaactatgtagattcaaat-ggtaaaggaagacaagttct
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     12858 148 +    139590 TTTTAGACCCCTTCTCATtgtaaacctaga----aaacagagaaaggctctctgatggaaaaagacacaccttagggaggaggacattgcaatgggaaaatgcctgacaaaataaactatgtagattcaaat-ggtaaaggaagacaaggtct
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474678 152 - 192599291 CTTTAGACCCCTTCTCGTtgtaaacctaaataacaagcatagaaaggctctttaaaggaaaaagacatatcttagggaggagggcattgcaatgggaatatgcatgacagagtaaactatgtagattcaaataggtaaagg-agacaaggttt
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192312985 152 + 192460366 CTTTAGACCCCTTCTCGTtgtaaacctaaataacaagcatagaaaggctctttaaaggaaaaagacatatcttagggaggagggcattgcaatgggaatatgcatgacagagtaaactatgtagattcaaataggtaaagg-agacaaggttt
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187284283 153 - 187378091 ctttAGACCCCTTCTCATTGTAAACCTAAATAACAAACATAGAAAGgctctttaaaggaaaaagacataTCTTAGTGAGGAgggcattgcaatgggaatatgcATGACAGAGTAAACTATGTAGATTCAAATAGGTAAAGGAAGAcaaggttt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101178368 153 + 101219884 CTTTAGACCCCTTCTCGTtgtaaacctaaataacaaacatagaaaggctctttaaacgaaaaagacatatcttagggaggagggcattgcaatgggaatacgcatgacaaagtaaactatgtagattcaaataggtaaaggaagacaaggttt
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11123532  36 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=332668.000000
s hg38.chr14_KI270722v1_random        38401 202 +    194050 ttaaaagaaaaatgaTCAACCTGGATACCTGGAAGTATGggggagtagaaaaaaataaataaaggaaaaatgaagaggcttctataattgttttgatatagttacctttgactataaagatcaacaacaaggtcgatgtcagttgaagtttgggcaggcggttgctggatagatgtcctcacagaagtgtattttgtgtaag
s panTro4.chr3                    125127955 194 - 202329955 ttaaaagaaaaacgatca--------acctggaagtatgggggagtagaaaaaaataaataaaggaaaaatgaagaggcttatataattattttgatacagttgtctttgactataaagataaacaacaaggtcgatgtcagttgaaggttgggcaggcagttgctggatagatgtcctcacagaagtatattttgtgtaag
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13006 194 +    139590 ttaaaagaaaaacgatca--------acctggaagcatgggggagcagaaaaaaataaataaaggaaaaatgaagaggcttatataattgttttgatatagttatcttcgactataaagatcaacaacaaggtcgatgtcagttgaaggttgggcaggtggttgctggatagatgtcctcacagaattgtattttgtgtaag
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192474830 191 - 192599291 ttaaaagaagaatgatca--------acctggaagtatgggggagtaggaaaa---aaataaaggaaaaatgaagaggcttgtataattgttttgacacagttatctttgactataaagatcgacaacaaggtcgatgtcagttgtaggttgggcaggtggttgctggatagatgtccccacagaagtattttttgtgtaag
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313137 191 + 192460366 ttaaaagaaaaatgatca--------acctggaagtatgggggagtaggaaaa---aaataaaggaaaaatgaagaggcttgtataattgttttgacacagttatctttgactataaagatcgacaacaaggtcgatgtcagttgtaggttgggcaggtggttgctggatagatgtccccacagaagtattttttgtgtaag
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187284436 191 - 187378091 ttaaaagaaaaatgatca--------acCTGGAAGTATGGGggagtaggaaaa---aaataaaggaaaaatgaagaggcTTATATAATTGTTTTGACACAGTTATCTTTGACTATAAAGATCGACAACAAGGTCGATGTCAGTTGAAGGTTGGGCAGGTGGTTGCTGGATAGATGTCCCCACAGAAGtgttttttgtgtaag
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101178521 191 + 101219884 ttaaaagaaaaatgatca--------acctggaagtatggggcagtaggaaaa---aaataaaggaaaaatgaagaggcttatgtaattgttttgacacagttatctttgactataaagatcaacaacaaagtcgatgtcagttgaaggttgggcaggtggttgctggatagatgtccccacagaagtgttttttgtgtaag
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11123568 136 +  39895921 TTaaaaaaaaaaaaaaaa--------ac-----------------------aa---aagcagagcaaacaaaaa---------------------aTATCCTTATTCTGGAGAACAAATGACAGAAATA----CAATG-CAGTTCAGGCCTAGAGAG------GATGGATCTAACTCATTTAGGATATGCATGTTTGGTAGG
i canFam3.chr31                   I 36 I 214
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=429007.000000
s hg38.chr14_KI270722v1_random        38603 266 +    194050 gttgctatggcctttgtgcaaggttgtggtttttgtggtattttgtgatag---ttgttatcaggcctagaagcatgagaaccctctcttcaaggccttttctgaatctatttgttcagtttttttcttttctttttaaacattagtgacagttttga-----------ttcATATAATGATCCCTAATTTC--AAAAAAAA-TTA--AACGTGTAACTTATTTATGATGTATTTGATAGGCTTGCATTTGTGAATCACCTCTACTA-----TCTAT-AGTGGTAGATATA
s panTro4.chr3                    125128149 281 - 202329955 gttgctatggcctgtgtgcaaggttgtcgtttttgtggtattttgtgatagtttttgttatcaggcctagaagcatgagaaccctctctt-aaggccttctctgaatctatttgtgcaggttttttcttttctttttaaacattagtgacagttttgattctgataactttcataTCATGATCCCTAATTTCAAAAAAAAAA-TTA--AATGTGTAACTTATTTATGATGTATTTGATAGGCTTGGATTTGTGAATCACCTCTACTA-----TCTAT-AGTGGTAGATATA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13200 281 +    139590 gtggctatagcctttgtgcaaggttgtggtttttgtggcattttgtgacagtttttgctgtcaggcctagaagcatgagaaccctctcttcaaggccttctctgaatctatttgtccaggttttttcttttctttttaaacattagtgacagttttgattctgataactttcataTTGTGATCCCTAATTTC-AAATAAAAA-TTA--AACGTGTAACTGATTTATGATGTATTTGATAGGCTTGGATTTGTGAATCACCTCTACTA-----TCTAT-AGTGGTAGATATA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475021 285 - 192599291 gttgctacggcctttgtgcaagattgtagttttcgtggtattttgt------ttttgttatcaggcctagaagcgtaagaaccctctcttcaaggccttctctgaatttttttgtctgggttttttcttttctttttaaacattaatgacagttttgattctgataactttcacaTCATGACCCCTAATTTCAAAAAAAAAATATAATAACATGTAACCTATTTATGGTGTATTTGGTAGGCTTGGATTTGTGAATCACCTCTACCACTGCTTCTTTAAATAGCAGATATA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313328 284 + 192460366 gttgctacggcctttgtgcaagattgtagttttcgtggtattttgt------ttttgttatcaggccaagaagcgtaagaaccctctcttcaaggccttctctgaatttttttgtctgggttttttcttttctttttaaacattaatgacagttttgattctgataactttcacaTCATGACCCCTAATTTCAAAAAAAATA-ATAATAACATGTAACCTATTTATGGTGTATTTGGTAGCCTTGGATTTGTGAATCACCTCTACCACTGCTTCTTTAAATAGCAGATATA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187284627 281 - 187378091 gttgctacggcctttgtgcaaggttgtagtttttgtggtattttgt------ttttgttatcaggCCTAGAAGCGTAAGAACCCTCTCTTCAAGGCCTTCTCTGAATTTATTTgtctgggttttttcttttctttttaaacattaatgACAGCTTTGATTCTGATAACTTTCACATCATGATCcctaatttcaaaaaaaaaa----ataacatgtaacCTATTTATGGTGTCTTTGGTAGGCTTGGATTTGTGAATCACCTCTACCACTGCTTCTTTAAATAGCAGATATA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101178712 284 + 101219884 gttgctatggcctttgtgcaaggttgtagtttttgtggtattttgt------ttttgttatcaggcccagaagcgtgagaaccctctcttcaaggccttctctgaatttatttgtctgggttttttcttttctttttaaacattaatgacagttttgattctgataactttcacaTCATGATCCCTAATTAAAAAAAATAAA-TAAATAACATGTAACCTATTTATGATGTATTTGGTAGGCTTAGATTTGTGAATCACCTCTACCACTGCTTTTTTAAATAGCAGATATA
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11123704 214 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=319855.000000
s hg38.chr14_KI270722v1_random        38869 154 +    194050 TCTGAGCCTGCTTACACAGGACTTCCATCAGATTCTCTCTTCAGTGGAATTGGAAGAGGGG---------GTTTTGGAGAAGGGAATG-AAGGAATTGTGCTGCATCAGAGGTCCCCACCTA-ACAGCCACATGGACTTTTTCTGTGCTCTTGCCAGGCCGTTGT
s panTro4.chr3                    125128430 153 - 202329955 TCTGAGCCTGCTTACACAGGACTTCCATCAGATTTTCTCTTCAGTGGAATTGGAAGAGGGG---------GTTTTGGAGAAGGGGATG-AAGGAATTGTGCTGCATCAGAAGTCCCCACATA-ACAG-CACAGGGACTTTTTCTGTGCTCTTGCCAGGCCGTTGT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13481 153 +    139590 TCTGAGCCTGCTTACACAGGACTTCCATCAGATTTTCCCTTCAGGGGAATTGGAAGAGGGA---------GTTTTAGAGAAGAGGATG-AAGGAATTGTGCTGCATCAGAAATCCCCACCTA-ACAG-CACAGGGACTTTTTCTGTGCTCTTGCCAGGCCATTGT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475306 151 - 192599291 TCTGAGCCTGCTT--ACAGGACGTCCATCAGATTTTCTCTTCAGTGGAATTGGAAGAGGGG---------GTTTTGGAGAAGGGGATG-AAGGAGTTGTGCTGCATCAGAGGCCCCCACCTA-ACAG-CACAGGGACTTTTTCTGTGCTCTTGCCAGGCCATTGT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313612 151 + 192460366 TCTGAGCCTGCTT--ACAGGACGTCCATCAGATTTTCTCTTCAGTGGAATTGGAAGAGGGG---------GTTTTGGAGAAGGGGATG-AAGGAGTTGTGCTGCATCAGAGGCCCCCACCTA-ACAG-CACAGGGACTTTTTCTGTGCTCTTGCCAGGCCATTGT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187284908 151 - 187378091 TCTGAGCCTGCTT--ACAGGACGTCCATCAGATTTTCTCTTCAGTGGAATTGGAAGAGGGG---------GTTTTGGAGAAGGGGATG-AAGGAATTGTGCTGCATCAGAGGCCCCCACCTA-ACAG-CACAGGGACTTTTTCTGTGCTCTTGCCAGGCCATTGT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101178996 151 + 101219884 TCTGAGCCTGCTT--ACAGGACGTCCATCAGATTTTCTCTTCAGTGGAATTGGAAGAGGGG---------GTTTTGGAGACGGGGATG-AAGGAATTGTGCTGCATCAGAGGCCCCCACCTA-ACAG-CACAGGGACTTTTTCTGTGCTCTTGCCAGGCCATTGT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11123918 162 +  39895921 TTTGAGCCTGCCT--TCAGGATTTCCACTAGATTTTGGCTTTGATGGAGCTAGAAAGGGGGTCTCAACATGTTTTAGAAGAAAGGATGAAAAAAATTATGCCACATTAGAAGGCCACATCTATACAA-CACATAAGTTTTTCTTTCACTCCTGCCAGGCTGTTGT
i canFam3.chr31                   I 214 I 5308
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=80535.000000
s hg38.chr14_KI270722v1_random        39023 44 +    194050 ATT-ggctgatgcaaaagtaattttggttttgtcattgaaagtaa
s panTro4.chr3                    125128583 45 - 202329955 Attaggctgatgcaaaagtaattttggttttgtcattgaaagtaa
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13634 45 +    139590 Attaggctgatgcaaaagtaattttggttttgtcattgaaagtaa
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475457 45 - 192599291 Attaggctgatgcaaaagtaattttggttttgtcaatgaaagtga
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313763 45 + 192460366 Attaggctgatgcaaaagtaattttggttttgtcaatgaaagtga
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285059 45 - 187378091 ATTAGGCTGATGTAAAAGTAATTTTGGTTTTGTCAATGAAAGTGA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179147 45 + 101219884 Attaggctgatgcaaaagtaattttggttttgtcaatgaaagtaa
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11124080 5308 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=331281.000000
s hg38.chr14_KI270722v1_random        39067 172 +    194050 tgAGACCATCTGACTTACAAT---GTCTGTGCCATAACCAGCTCCTAATAGCCTCCGAGGACAGCTTTGCCCTGACATATACTGTCCTGGAACCACGTCTGCTTTGTAACTCCTGAGGTAGCTGCCACT--------ATGACCAATGCCTT-CTCATCTTTACTCTACA-----TGCAGGTAACAGTTA
s panTro4.chr3                    125128628 171 - 202329955 tgAGACCATCTGACTTACAAT---GTCTGTGCCATGACCAGCTCCTAATAGCCTCCAAGGACAGCTCTACCCTGACATATACTGTCCTGGAACCACGTCTGCTTTGTAACTCCTGA-GTAGCTGCCACC--------ATGACCAATGCCTT-CTCATCTTTACTCTACA-----TGCAGGTAACATTTA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13679 172 +    139590 tgAGAACATCTGTCTTACAAT---GTCTGTGCCATGACTAGCTCCTAATAGCCTCTGAGGACAGCTTTGCCCTGACATATACTGTCCTGGAACCACGTCTGCTTTGTAACTCCTGAGGAAGCTGCCACC--------ATGACCAATGCCTT-CTCATCTTTACTCTACG-----TGCAGGTAACAGTTA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475502 169 - 192599291 tgAGACCATCTGACTTACAAT---GCCTGTGCCATGACCAGCTCCTAATAGCCTCCAAGGGCACCTCTGCCCTGACATATACTGTCCTGGAACCACGTCTGCTTTGTAACTCCTGAGGTAGTTGCCACT--------ATGACCAATGCCTT-CTTCTCAT--CTTTACA-----TGCAGGT-ACAGTTA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313808 169 + 192460366 tgAGACCATCTGACTTACAAT---GCCTGTGCCATGACCAGCTCCTAATAGCCTCCAAGGGCACCTCTGCCCTGACATATACTGTCCTGGAACCACGTCTGTTTTGTAACTCCTGAGGTAGTTGCCACT--------ATGACCAATGCCTT-CTTCTCAT--CTTTACA-----TGCAGGT-ACAGTTA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285104 169 - 187378091 TGAGACCATCTGACGTACAAT---GCCCGTGCCATGACCAGCTCCTAATAGCCTCCAAGGACACCTCTGCCCTGACATATACTGTCCTGGAACCACGTCTGCTTTGTAACTCCTGAGGTAGTTGCCACT--------ATGACCAATGCCTT-CTTCTCAT--CTTTACA-----TGCGGGT-ACAGTTA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179192 170 + 101219884 tAAGACCATCTGACTTACAAT---GCCTGTGCCATGACCAGCTCCTAATAGCCTCCAAGGACACGTCTGCGCTGACATATACTGTCCTGGAACCACGTCTGCTTTGTAACTCCTGAGGTAGTTGCCACT--------ATGACCAATGCCGC-CTTCTCAT--CTTTACA-----TGCAGGTAACAGTTA
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11129388 183 +  39895921 TGAGACCATCTGACTTACAATCAAGCCAG----ATGACCAGGTTCTAATGATATCATAGCACAACCTTGCCCTGACATATAGTGTCCACACAGCATGACTGCTCTGTAACTTCTAACGTAGCTGACACCGATGACCAATGACCAATGCCTTGCTTCTCGC--ATTTACAATATGTAAAGGTAGTAGTCA
i canFam3.chr31                   I 5308 I 681
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=3822.000000
s hg38.chr14_KI270722v1_random        39239 2 +    194050 TA
s panTro4.chr3                    125128799 2 - 202329955 TA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13851 2 +    139590 TA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475671 2 - 192599291 TA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313977 2 + 192460366 TA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285273 2 - 187378091 TA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179362 2 + 101219884 TA
i chlSab2.chr22                   C 0 C 0
e micMur1.scaffold_3530              117671 3845 +    180192 I
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11129571 681 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=5096.000000
s hg38.chr14_KI270722v1_random        39241 2 +    194050 AT
s panTro4.chr3                    125128801 2 - 202329955 AT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13853 2 +    139590 AT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475673 2 - 192599291 AT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313979 2 + 192460366 AT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285275 2 - 187378091 AT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179364 2 + 101219884 AT
i chlSab2.chr22                   C 0 C 0
s micMur1.scaffold_3530              121516 2 +    180192 AT
i micMur1.scaffold_3530           I 3845 N 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11129571 681 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=3822.000000
s hg38.chr14_KI270722v1_random        39243 2 +    194050 TA
s panTro4.chr3                    125128803 2 - 202329955 TA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13855 2 +    139590 TA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475675 2 - 192599291 TA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313981 2 + 192460366 TA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285277 2 - 187378091 TA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179366 2 + 101219884 TA
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19608177 1392 -  19803153 I
e canFam3.chr31                    11129571 681 +  39895921 I
e gorGor3.chr3                    122170233 1391 - 199944510 I

a score=3276.000000
s hg38.chr14_KI270722v1_random        39245 1 +    194050 T
s panTro4.chr3                    125128805 1 - 202329955 T
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19609569 1 -  19803153 T
i panPan1.JH650580                I 1392 I 668
s gorGor3.chr3                    122171624 1 - 199944510 T
i gorGor3.chr3                    I 1391 I 987
s nomLeu3.chr21_GL397661_2_random     13857 1 +    139590 T
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475677 1 - 192599291 T
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313983 1 + 192460366 T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285279 1 - 187378091 T
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179368 1 + 101219884 T
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e canFam3.chr31                    11129571 681 +  39895921 I

a score=8478.000000
s hg38.chr14_KI270722v1_random        39246  15 +    194050 GTCT----------------------------------------------------------------------------------------------------CTGTGTATTCA
s panTro4.chr3                    125128806  15 - 202329955 ATCT----------------------------------------------------------------------------------------------------CTGTGTATTCA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13858  15 +    139590 ATCT----------------------------------------------------------------------------------------------------CTGTGTATTCA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475678  15 - 192599291 ATCT----------------------------------------------------------------------------------------------------CTGTGTATTCA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313984  15 + 192460366 ATCT----------------------------------------------------------------------------------------------------CTGTGTATTCA
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285280 115 - 187378091 ATCTCTGTGTATTCACAGAGCAGTTGGTACATCTAGGACTTCTACAAAATGTCCCTGTGTATTCACAGAGCAGTTGGTACATCTAGGACTTCTACAAAATGTCCCTGTGTATTCA
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179369  15 + 101219884 ATCT----------------------------------------------------------------------------------------------------CTGTGTATTCA
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19609570 668 -  19803153 I
e canFam3.chr31                    11129571 681 +  39895921 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=296154.000000
s hg38.chr14_KI270722v1_random        39261 149 +    194050 CAGAACATCCAGTACATCTGGGACTTCTACAAAATTTCCCTAGCTGATTTTGGTGTTCTGGGGTCCTGGCAGCTCTAGCCATGAAGGGATGATGCTTTAGCAGCATTTCTGTTGACTTTTTTGCTTTTTCTCAAAAACTGATTCCACTT
s panTro4.chr3                    125128821 148 - 202329955 CAGAACAATTAGTACATGTAGGACTTCTACAAAATTTCCCTAGCTGATTTTGGTGTTCTGGTGTCCTGGCAGCTCTAGCCGTGAAGGGATGATGCTTTATCAGCATTTCTGTTGAG-TTTTTGCTTTTTCTCAGAAACCGATTCCACTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     13873 149 +    139590 GAGAACAATTAGTACATCTAGGACTTCTACAAAATTTCTCTAGTTGATTTTGGTGTTCTGGTGTCCTGGCAGCTCTAGCCATGAAGGGATGGTGCTTTATGAGCATTTCTGTTGAGTTTTTTGCGTTTTCTCAGAAACTGATTCCACTT
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475693 149 - 192599291 CAGAGCAGTTAGTACATCTAGGACTTCTACAAAATGTCCCTGGCTGACCCTGGTGTTCTGGTGTCCTGGCAGCTCCAGCCATGAAGGGATGATGCTTTATGAGCATTTCTGTTGAGTTTTTTGCTTTTTCTCAGAAACTGATTCCACTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192313999 149 + 192460366 CAGAGCAGTGAGTACATCTAGGACTTCTACAAAATGTCCCTGGCTGACCCTGGTGTTCTGGTGTCCTGGCAGCTCCAGCCATGAAGGGATGATGCTTTATGAGCATTTCTGTTGAGTTTTTTGCTTTTTCTCAGAAACTGATTCCACTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285395 141 - 187378091 CAGAGCAGTTAGTACATCTAGGACTTCTACAAAATGTCCCTGGCTGGCC--------CTGGTGTCCTGGCAGCTCCAGCCATGAAGGGATGATGCTTTATGAGCATTTCTGTtgagttttttgctttttctcagaaACTGATTCCACTT
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179384 148 + 101219884 CAGAGCAGTTAGTACATCTAGGACTTCTACAAAATGTCCCTAGCTGATCCTGGTGTTCT-GTGTCCTGGCAGCTCCAGCCATGAAGGGATGATGCTTTATGAGCATTTCTGTTGAGTTTTTTGCTTTTTCTTAGAAACTGATTCCACTT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11130252 148 +  39895921 CATAACAGTTGGTACATCCAGCACTTCTCTAGAGTTCGTCTACCTACTTTAGGTGTTCTGATGTTCAGGAAGTTCTTGCCATTAAGGGATGATACTTCATGGGTGTTTCTACTGAGATCTTT-TTTTTCCTCAGAAACCAATTTCACTT
i canFam3.chr31                   I 681 I 441
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19609570 668 -  19803153 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=133795.000000
s hg38.chr14_KI270722v1_random        39410 80 +    194050 TTCCCACATACGTTTGACAATTCATTTGAACTCATTTATTCTAAACCCATTATTTTTGGTCTATTATTTAAtaggga-ggg
s panTro4.chr3                    125128969 81 - 202329955 TTCCCACATAGGTTTGACAATTTATTTGAACTCATTTATTCTAAACCCATTATTTTTTGTCTATTATTTAATAgggagggg
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14022 81 +    139590 TTCCCACATACGTTTGAAAATTTATTTGAATTGATTTATTCTAAACCCATTATTTTTTGTCTATTATTTAATAgggagggg
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475842 81 - 192599291 ATCCCACATACATTTGACAATTTACTTGAGCTCATTTATTCTAAACCCATTATTTTTTGTCTATTATTTTATAgggagaat
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314148 81 + 192460366 ATCCCACATACATTTGACAATTTACTTGAGCTCATTTATTCTAAACCCATTATTTTTTGTCTATTATTTTATAgggagagg
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285536 81 - 187378091 ATCCCACATACATTTGACAATTTACTTGAACTCATTTTTTCTAAACCCATTattatttgtctattattttatAGGGAGAGG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179532 81 + 101219884 ATCCCACATACATTTGACAATTTACTTGAACTCATTTATTCTAAACCCATTATTTTTTGTCTATTATTTTATAgggagggg
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19609570 668 -  19803153 I
e canFam3.chr31                    11130400 441 +  39895921 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=4683.000000
s hg38.chr14_KI270722v1_random        39490 2 +    194050 gg
s panTro4.chr3                    125129050 2 - 202329955 gg
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14103 2 +    139590 ag
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475923 2 - 192599291 gg
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314229 2 + 192460366 gg
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285617 2 - 187378091 Gg
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179613 2 + 101219884 gg
i chlSab2.chr22                   C 0 C 0
s tupBel1.scaffold_62468.1-4574        1008 2 -      4574 GG
i tupBel1.scaffold_62468.1-4574   N 0 N 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19609570 668 -  19803153 I
e canFam3.chr31                    11130400 441 +  39895921 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=248712.000000
s hg38.chr14_KI270722v1_random        39492 154 +    194050 caagggataaaagattacaaatagggtgcagtgtacactgctcgggtgatgggtgcacccaaatctcacaaatctccagtaaagaacttacccatggaaccaaataccacc-gtaccccaataacctatgg----------aaaaaaaaaTAAAAAAGAGTCA----GA
s panTro4.chr3                    125129052 164 - 202329955 tgagggataaaagattacaaatagggtgcagtgtacactgctagggtggtggatgcaccaaaatctcacaaatcaccactaaagaacttactcatgaaaccaaataccacc-gtaccccaataacctatggaaaataaaaTAAAATAAAATAAAAAAGAGTCA----GA
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14105 164 +    139590 cgagggataaaagattataaatagggtgcagtgtacactgcttgggtgatgggcgcaccaaaatctcacaaatcaccactaaagaacttactcatggaaccaaataccacc-gtaccagaataacctatgaaaaaaaaTAAAAAATAAAATAAAAAAGAGTCA----GA
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192475925 165 - 192599291 caagggataaaagactacaaatagggtgcagtgtatactgcttgggtgatgggtgcacc-aaatctcacaaatcaccactaagtaacttattcatgtaaccaaataccacctgtaccccaataacctatggaaaaaat---aaaaTAAAATAAAAAAGAGTCCAAAAAA
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314231 162 + 192460366 caagggataaaagactacaaatagggtgcagtgtatactgcttgggtgatgggtgcaccaaaatctcacaaatcaccactaagtaacttattcatgtaaccaaataccacctgtaccccaataacctatggaaaaaat---aaaaTaaaataaaaaagagtcc----aa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285619 157 - 187378091 caaggaataaaagactacaaatagggtgcagtgtatactgcttgggtgatgggtgcaccaaaatctcacaaatcaccactaagtaatttattcatgtaaccaaataccacctgtaccccaataacctatggaa--------aaaataaaataaaaaagagtac----ca
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179615 160 + 101219884 caagggataaaagactacaaatagggtgcagtgtacactgcttgggtgatgggtgcaccaaaatctcacagatcaccactaagtaacttattcatgtaaccaaacaccacctgtatcccaataacctatggaaaaaat---aaaaTAAAAT--AAAAGAGTCC----AA
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19609570 668 -  19803153 I
e canFam3.chr31                    11130400 441 +  39895921 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=477607.000000
s hg38.chr14_KI270722v1_random        39646 262 +    194050 AAGAAAG-----AAAATAATCACTGTACTTACCATGACACTTAGAAATGGTGACTAGCATTTTTTGTAAGTGTCACCTAATAATATTATTATT-----TTTTGTTTATGCTACAA----ACTAGCTCTGCTATTACAATCACTACTATTTGAAGTGTTACTAAATTAAATTAAATC-----TATTTTATCCTTCTGGACTCAGAAATGGGGGTAAATGCTAAGACAATTTCAGAATATGATCACATATTAAAAGCATATTATAT----GCGGAAAATGTGATTTT
s panTro4.chr3                    125129216 258 - 202329955 AGAAAAG-----AAAATAATCACTGTACTTACCATGACACTTACAAATGATGACTAGTATTATTT----GTGTCACCTAATAATATTATTATT-----TTTTCTTTATGCTACAA----ACTAGCTCTGCTATTACAATCACTACTATTTGAAGTGTTACTAAATTAAATTAAATT-----TATTGTATCCTTCTGGACTCAGAAGTGGGGGTAAATGCTAAGACAATTTCAGAATATGATCACATATTGAAAGCATATTATAT----GGGGACAATATGATTTT
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14269 256 +    139590 AAAAAAG-----AAAATAATCATCATACTTACCATGACACTTACAAATGGTGACTAACATTATTT----GTGTCACCTAATAATATTATTATT-----TTTTCTTTATGCTACAA----ACTAGCTCTGCTATTAGAATCACTACTATTTGAAGTGTTAATAAATTAAATTAAATT-----TATTGTATCTTTCTGGACTCAGAAGTTGGGGTAAATGCTAAGACAATTTCAGAATATGATCATGTATTAAAAGCATATTATAT----GGGGAAAATATGATT--
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476090 269 - 192599291 AAAAAAAAAAACAAAGTAATCACTGTACTTACCATGACACTTACAAATGGTGACTAGCATTATTTATATGTGTCACCTAATAA---TATTATT-----TTTTCTTTATGCTACAA----ACTAGCTCTCCTATTAGAATCACTACAATTTGAAGTGTTACtaaattaaattaaattaaattTATTGTATCCTTCTGGACTCAGAAGTGGGGGTAATTGCTAAGACAATTTCAGGATATAATCACATATTAAAAGCATATTAAAT----GGGGAAAATATGATTTT
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314393 269 + 192460366 aaaaaaaaaaacaaaGTAATCACTGTACTTACCATGACACTTACAAATGGTGACTAGCATTATTTATATGTGTCACCTAATAA---TATTATT-----TTTTCTTTATGCTACAA----ACTAGCTCTCCTATTAGAATCACTACAATTTGAAGTGTTACTAAATTAAATTAAATTAAATTTATTGTATCCTTCTGGACTCAGAAGTGGGGGTAATTGCTAAGACAATTTCAGGATATAATCACATATTAAAAGCATATTAAAT----GGGGAAAATATGATTTT
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187285776 257 - 187378091 aaa---------aaaGTAATCACTGTACTTACCATGACACTTACAAGTGGTGACTAGCATTATTTATATGTGTTACctaataa------aatt-----ttttctttatgctataa----ACTAGCTCTGCTATTAGAATCACTACAATTTGAAGTGTtactaaattaaattaagttaaatttattGTATCCTTCTGGACTCAGAAGTGGGGGTAATTGCTAAGACAATTTCAGGATATGATCACATATTAAAAGCATATTAAAT----Ggggaaaatatgatttt
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101179775 263 + 101219884 AAAAAG------AAAGTAATCACTGTACTTACCATGACACTTACAAATGGTGACTAGCATTATTTATATGTGTCACCTAATAA---TATTATT-----TTTTCTTTATGCTACAA----ACTAGCTCTGCTATTAGAATCACTACAATTTGAAGTGTTACTAAATTAAATTAAATTAAATGTATTGTATCCTTCTGGACTCAGAAGTAGGGGTAATTGCTAAGACAATTTCAGGATATGATCACATATTAAAAGCATATTAATT----GGGGAAAATATGATTTT
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11130841 266 +  39895921 AAAACAG-----AAAATAAACACTACACACCCTACTGCAACTAGGAATGATGACTGGCATTATTTTTATATGTCATCTCACAA------TATTTGGGGTTTTTTTCATAATATAAAGATAATAACTTAGTTGTTTCTATCATTTGTATTTAAAGTAGCACTAAATAAAATTAAATT-----CATAGTATCCTCCTAGACTCAGAAATTAGAGTAATTCTTAATACCATTTTAGAATATGAGAGCATATTAAAGATGTATAATTTTGTAGAAAAAGAGCTGAT---
i canFam3.chr31                   I 441 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19609570 668 -  19803153 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=-20.000000
s hg38.chr14_KI270722v1_random        39908 1 +    194050 T
s panTro4.chr3                    125129474 1 - 202329955 A
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19610238 1 -  19803153 a
i panPan1.JH650580                I 668 I 309
s rheMac3.chr2                    192476359 1 - 192599291 T
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314662 1 + 192460366 T
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286033 1 - 187378091 t
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180038 1 + 101219884 T
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11131107 1 +  39895921 T
i canFam3.chr31                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e gorGor3.chr3                    122171625 987 - 199944510 I
e nomLeu3.chr21_GL397661_2_random     14525 0 +    139590 C

a score=622136.000000
s hg38.chr14_KI270722v1_random        39909 308 +    194050 -AAAAAATAGAAATTGgtagagaaacaatttttggg--tctttaatttccgcacattttgcaagtatggacgctgactttattgttccaaatgattg--ttttcaagcatgtttgtatagaaaacagccttggaatagaaaaccagtacctccttctggaacaaaggaaaa----------gtttatttactgtctagtataatgcagataatttctccctcttgggaagcatacagccaagtgaacttccaataacacaagttgg-ggtttcttgagcttg-ggtttttcttccacagtgtaatgtgcaggtgccacttggctc
s panTro4.chr3                    125129475 309 - 202329955 -AAAAAATAGAAATTGGTAGATaaacaatttttgggtctctttaacttctgcacattttgcaagtatggatgctgactatcttgttccaaatgattg--ttttcaagcatgtttgtatggaaaacagccttggaatagaaaactagtacctccttctgg-acaaaggaaaa----------gtttatttactgtctagtataatgcagataatttctccctctggggaagggtacagccaagtgaacttcccataatacaagttgg-ggtttcttgagcttg-ggtttttctcccacagtgtaatgtgcaggtgccgcttggctc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14525 309 +    139590 --AAAAATAGAAATTGgtagagaaacaatttttgggtctctttaatttccgcacattttgcaaatgtggacgctgactatcttgttccaaatgattg--ttttcaagcatgtttgtatagaaaacagccttggaatagaaaaccagtacctccttctggaacaaaggaaaa----------ttttatttactgtctagtataatgcagataatttctccctctggggaaggatacagccaagtgaacttcccataacacaagctgg-ggtttcttgagcttg-gatttttctcccaccgtgtaatgtgtaggtgccacttggctc
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476360 310 - 192599291 -AAAAAATAGAAATTGgtagagaaacaatttttgggtctgtttaatttctgcacattttgcaagtatggacactgactatcttgttccaaatgattg--ttttcaagcatgtttgtatagaaaacagccttggaatagaaaaccagtacctccttctggaacaaaggaaag----------gcttatttgctgtctagtataatgtagataatttctctctctggggaaaggtacagccaagtgaacttcccataatacaaattgg-ggtttcttgagcttg-ggtttttctcccacagtgtaatgtgcacaagccgcttggctc
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314663 310 + 192460366 -AAAAAATAGAAATTGgtagagaaacaatttttgggtctgtttaatttctgcacattttgcaagtatggacactgactatcttgttccaaatgattg--ttttcaagcatgtttgtatagaaaacagccttggaatagaaaaccagtacctccttctggaacaaaggaaag----------gcttatttgctgtctagtataatgtagataatttctctctctggggaaaggtacagccaagtgaacttcccataatacaaattgg-ggtttcttgagcttg-ggtttttctcccacagtgtaatgtgcacaagccgcttggctc
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286034 306 - 187378091 -aaaaaattgaaattggtAGAGAAACAATTTTTGGGTCTGTTTGATTTCTGCACATTTTGCAAGTATGGAC----ACTATCTTGTCCCAAATGATTG--TTTTCAAGCATGTTTGTATAGAAAACAGCCTTGGAATAGAAAACCAGTACCTCCTTCTGGAACAAAGGAAAG----------GCTTATTTACTGTCTAGTATAATGTAGATAATTTCTCTCTCTGGGGAAAGGTACAGCCAAGTGAACTTCCCATAATACAAATTGG-GGTTTCTTGAGCTTG-GGTTTTTCTCCCACAGTGTAATGTGCACATGCCACTTGGCTC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180039 310 + 101219884 -TAAAAATAGAAATTGgtagagaaacaatttttgggtctgtttaatttctgcacattttgcaagtatagacactgactatcttgttccaaatgattg--ttttcaagcatgtttgtatagaaaacagccttggaatagaaaactagtacctccttctggaacaaaggaaaa----------gcttatttgctgtctagtataatgtagataatttctttctctggggaaaggtacagccaagtgaacttcccataatacaaattgg-ggtttcttgagcttg-ggtttttctcccatagtgtaatgtgcacgttccacttggctc
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11131108 305 +  39895921 TAATAAACTGGATTAGGAGGGT-----GCTCTtggg--tgtctgatttccgcacaatttgcaag------cactggctgccttgtt-----tgaataccttttcaacaatgtctgtatagaaaacagccttggaatatagaattagtgtctccttctggagcaaaggaaaagcttgtttaggcttgtttactgtccagtataatttagagaatgtctttctctggggaaaagtcttggcaaatgaacattc-ataataaaagatggaggttccctaaacttgtggctgtacttctacagtaccatgggcaagcatcgcttgacc-
i canFam3.chr31                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19610239 309 -  19803153 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=4129.000000
s hg38.chr14_KI270722v1_random        40217 2 +    194050 tc
s panTro4.chr3                    125129784 2 - 202329955 tc
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19610548 2 -  19803153 TT
i panPan1.JH650580                I 309 I 754
s nomLeu3.chr21_GL397661_2_random     14834 2 +    139590 cc
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476670 2 - 192599291 tc
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314973 2 + 192460366 tc
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286340 2 - 187378091 TC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180349 2 + 101219884 tc
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11131413 2 +  39895921 cc
i canFam3.chr31                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=2548.000000
s hg38.chr14_KI270722v1_random        40219 1 +    194050 t
s panTro4.chr3                    125129786 1 - 202329955 t
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14836 1 +    139590 t
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476672 1 - 192599291 t
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314975 1 + 192460366 t
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286342 1 - 187378091 T
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180351 1 + 101219884 t
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11131415 1 +  39895921 t
i canFam3.chr31                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19610550 754 -  19803153 I
e gorGor3.chr3                    122171625 987 - 199944510 I

a score=4166.000000
s hg38.chr14_KI270722v1_random        40220 2 +    194050 tt
s panTro4.chr3                    125129787 2 - 202329955 tt
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122172612 2 - 199944510 tt
i gorGor3.chr3                    I 987 I 745
s nomLeu3.chr21_GL397661_2_random     14837 2 +    139590 tt
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476673 2 - 192599291 tc
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314976 2 + 192460366 tc
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286343 2 - 187378091 TC
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180352 2 + 101219884 tc
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11131416 2 +  39895921 tt
i canFam3.chr31                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19610550 754 -  19803153 I

a score=46510.000000
s hg38.chr14_KI270722v1_random        40222 20 +    194050 gtgttatcctGGGAAAGCTg
s panTro4.chr3                    125129789 20 - 202329955 gtgttaccctGGGAAAGCTg
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14839 20 +    139590 gtgttaccctGGGAAAGCTg
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476675 20 - 192599291 atgttacccCGGGAAAGCTg
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314978 20 + 192460366 gtgttaccctGGGAAAGCTg
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286345 20 - 187378091 GTGTTGCCCTGGGAAAGCTG
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180354 20 + 101219884 atgttaccctGGGAAAGCTg
i chlSab2.chr22                   C 0 C 0
s canFam3.chr31                    11131418 20 +  39895921 gtgttgccctgtgaaagttg
i canFam3.chr31                   C 0 N 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19610550 754 -  19803153 I
e gorGor3.chr3                    122172614 745 - 199944510 I

a score=1184983.000000
s hg38.chr14_KI270722v1_random        40242 713 +    194050  
s panTro4.chr3                    125129809 731 - 202329955  
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     14859 766 +    139590  
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192476695 726 - 192599291  
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192314998 717 + 192460366  
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187286365 705 - 187378091  
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101180374 722 + 101219884  
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19610550 754 -  19803153 I
e gorGor3.chr3                    122172614 745 - 199944510 I

a score=808.000000
s hg38.chr14_KI270722v1_random        40955 1 +    194050 g
s panTro4.chr3                    125130540 1 - 202329955 g
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19611304 1 -  19803153 g
i panPan1.JH650580                I 754 C 0
s nomLeu3.chr21_GL397661_2_random     15625 1 +    139590 g
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192477421 1 - 192599291 a
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192315715 1 + 192460366 a
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287070 1 - 187378091 a
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101181096 1 + 101219884 g
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e gorGor3.chr3                    122172614 745 - 199944510 I

a score=29304.000000
s hg38.chr14_KI270722v1_random        40956 9 +    194050 ctctggcta
s panTro4.chr3                    125130541 9 - 202329955 ctctggcta
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19611305 9 -  19803153 ctctggcta
i panPan1.JH650580                C 0 I 418
s gorGor3.chr3                    122173359 9 - 199944510 ctctggcta
i gorGor3.chr3                    I 745 C 0
s nomLeu3.chr21_GL397661_2_random     15626 9 +    139590 ctgtggcta
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192477422 9 - 192599291 ctctggcta
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192315716 9 + 192460366 ctctggcta
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287071 9 - 187378091 ctctggcta
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101181097 9 + 101219884 ctctggcta
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I

a score=2800.000000
s hg38.chr14_KI270722v1_random        40965 1 +    194050 g
s panTro4.chr3                    125130550 1 - 202329955 g
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122173368 1 - 199944510 g
i gorGor3.chr3                    C 0 I 448
s nomLeu3.chr21_GL397661_2_random     15635 1 +    139590 g
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192477431 1 - 192599291 g
i rheMac3.chr2                    C 0 C 0
s macFas5.chr2                    192315725 1 + 192460366 g
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287080 1 - 187378091 g
i papAnu2.chr2                    C 0 C 0
s chlSab2.chr22                   101181106 1 + 101219884 g
i chlSab2.chr22                   C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19611314 418 -  19803153 I

a score=192504.000000
s hg38.chr14_KI270722v1_random        40966 109 +    194050 gacttgttaaacaggagtggggagaa----cagccatccctattttattcctgttcataaggggaatgTGTtgggagaaaagctgagtgttggaagagaagctgaggcagggc
s panTro4.chr3                    125130551 109 - 202329955 gacttgttgaacaggagtggtgagaa----caggcatccctattttattcctgttcttaaggggaatgTGTtgggagaaaagctgagtgttgggagagaagctgaggcagggc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     15636 109 +    139590 gacttgttgaacaggagtggtgagaa----cagccatccctattttattcctgttcttaaggagaatgTGTtgggagaaacgctgagtgttcggagagaagctgaggcagggc
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192477432 109 - 192599291 gacttgttgaacaggagtggtaagaa----caggcatccctattttattcctgttcttaaggggaatgTGTtgggataaaaactgagtgatgggagagaagctgaggcaaggc
i rheMac3.chr2                    C 0 I 60
s macFas5.chr2                    192315726 109 + 192460366 gacttgttgaacaggagtggtaagaa----caggcatccctattttattcctgttcttaaggggaatgTGTtgggataaaaactgagtgatgggagagaagctgaggcaaggc
i macFas5.chr2                    C 0 I 60
s papAnu2.chr2                    187287081 109 - 187378091 gacttgttgaacaggagtggtaagAA----TAGGCATGCCTATTTTATTCCTGTTCTTAAGGGGAATGTGTTGGGATAAAAACTGAGTGATGGGAGAAAAGCTGAGGCAAGGC
i papAnu2.chr2                    C 0 I 60
s chlSab2.chr22                   101181107 113 + 101219884 gacttgttgaacaggagtggtaagaacaggcaggcatccctattttattcctgttcttaaggggaatgTGTtgggataaaaactgagtgatgggagagaagctgaggcaaggc
i chlSab2.chr22                   C 0 N 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19611314 418 -  19803153 I
e gorGor3.chr3                    122173369 448 - 199944510 I

a score=348526.000000
s hg38.chr14_KI270722v1_random        41075 293 +    194050 catatgtttctcattcacttgatacaccatttccttttaacccccacatcctcaccacctgtttctttgtttgagcaccaacaaatagcgtgggctcccagagcttggggactttgcagactccacactcgtgatggtctcctggtcccactttctctctcaaactgtctttttctcattcctttgactctgccggacttcatcacccccatgacctagtgttgggtctgatcaccccaacattcctggcgcccaacatggggtgacaaaga-cccggtgaaggaaggctagag
s panTro4.chr3                    125130660 294 - 202329955 catatgtttctcattcacttgatacaccgtttcctttcaacctccacatcctcaccacctgtttctttgtttgagcgccaataaatagcatgggctcccagagcttggggacttcgcagactccacacttgtgatggtcccctggtcccactttctctctcaaactgtctttttctcattcctttgactctaccggactttgtcacccccacaacctagtgttgggtctgatcaccccaacattccgggtgcccaacatggggcaacaaagaccccggtgaaggaaggctagag
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     15745 293 +    139590 catatgtttctcattcacttgatacaccatttcctttcaacccccacatcctcaccacctgtttctttgcttgagcaccaataaatagcgtgggctcccagagctt-gggacttcgcagactccacactcgtgatggtcccctggtcccactttctctctcaaactgtctttttctcattcctttgactccaccggactttgtcgcccccacgacctagtgttgggtctgatcaccccaacattcctggtgcccaacatggggccacaaagaccccggtgaaggaaggctagag
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s rheMac3.chr2                    192477601 288 - 192599291 catatgtttctcattcacttgagacaccatttcctttcaacccagacatactcaccacctatttct----ttgagcaccaataaataacgtcagctcccagagctcagagtcttcacagccaccacactcgcgatggtcccctggtcccactttctctctcaaactgtc--tttctcactcctttgactccaccagacttcatcacccccacgacctagtgttgggtctgatcactccaacTttcctggctcttaacatggggcaacaaagaccccggtgaaggaatgctagag
i rheMac3.chr2                    I 60 N 0
s macFas5.chr2                    192315895 288 + 192460366 catatgtttctcattcacttgagacaccatttcctttcaacccagacatactcaccacctatttct----ttgagcaccaataaataacgtcagctcccagagctcagagtcttcacagccaccacactcgcgatggtcccctggtcccactttctctctcaaactgtc--tttctcactcctttgactccaccggacttcatcacccccacgacctagtgttgggtctgatcactccaacTttcctggctcttaacatggggcaacaaagaccccggtgaaggaatgctagag
i macFas5.chr2                    I 60 C 0
s papAnu2.chr2                    187287250 288 - 187378091 caTATGTTTCTCATTCACTTGAGACACCATTTCCTTTCAACCCAGACATACTCACCACCTATTTCT----TTGAGCACCAATAAATAACGTCAGCTCCCAGAGCTCAGAGTCTTCACAGCCACCACACTCGCGATGGTCCCCTGGTCCCACTTTCTCTTTCAAACTGTC--TTTCTCACTCCTTTGACTCCACCAGACTTCATCACCCCCACGACCtagtgttgggtctgatcactcCAACTTTCCTGGCTCTCAACATGGGGCAACAAAGACCCCGGTGAAGGAATGCTAGAG
i papAnu2.chr2                    I 60 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19611314 418 -  19803153 I
e gorGor3.chr3                    122173369 448 - 199944510 I

a score=1628.000000
s hg38.chr14_KI270722v1_random        41368 11 +    194050 catatgaaagc
s panTro4.chr3                    125130954 11 - 202329955 catgtgaaagc
i panTro4.chr3                    C 0 C 0
s nomLeu3.chr21_GL397661_2_random     16038 11 +    139590 catgtgaaagc
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192316183  4 + 192460366 --tgtg-----
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287538  4 - 187378091 --TGTG-----
i papAnu2.chr2                    C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19611314 418 -  19803153 I
e gorGor3.chr3                    122173369 448 - 199944510 I

a score=1299.000000
s hg38.chr14_KI270722v1_random        41379 3 +    194050 aga
s panTro4.chr3                    125130965 3 - 202329955 aga
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122173817 3 - 199944510 aaa
i gorGor3.chr3                    I 448 C 0
s nomLeu3.chr21_GL397661_2_random     16049 3 +    139590 aga
i nomLeu3.chr21_GL397661_2_random C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19611314 418 -  19803153 I
e papAnu2.chr2                    187287542 0 - 187378091 C
e macFas5.chr2                    192316187 0 + 192460366 C

a score=11502.000000
s hg38.chr14_KI270722v1_random        41382 8 +    194050 ggacacat
s panTro4.chr3                    125130968 8 - 202329955 ggacacat
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19611732 8 -  19803153 GGACACAT
i panPan1.JH650580                I 418 C 0
s gorGor3.chr3                    122173820 8 - 199944510 agacacct
i gorGor3.chr3                    C 0 I 5208
s nomLeu3.chr21_GL397661_2_random     16052 8 +    139590 ggacacat
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192316187 8 + 192460366 tgacacat
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287542 8 - 187378091 TGACACGT
i papAnu2.chr2                    C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I

a score=17350.000000
s hg38.chr14_KI270722v1_random        41390 13 +    194050 catcaaaagacac
s panTro4.chr3                    125130976 13 - 202329955 catcaaaagacac
i panTro4.chr3                    C 0 I 2915
s panPan1.JH650580                 19611740 13 -  19803153 CATCAAAAGACAC
i panPan1.JH650580                C 0 C 0
s nomLeu3.chr21_GL397661_2_random     16060 13 +    139590 catcaaaagacac
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192316195 13 + 192460366 catcaaaagacac
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287550 13 - 187378091 CATCAAAAGTCAC
i papAnu2.chr2                    C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e gorGor3.chr3                    122173828 5208 - 199944510 I

a score=1219.000000
s hg38.chr14_KI270722v1_random        41403 4 +    194050 gcga
s panPan1.JH650580                 19611753 4 -  19803153 CTGG
i panPan1.JH650580                C 0 I 139
s nomLeu3.chr21_GL397661_2_random     16073 4 +    139590 caga
i nomLeu3.chr21_GL397661_2_random C 0 C 0
s macFas5.chr2                    192316208 4 + 192460366 ctga
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287563 4 - 187378091 CTGA
i papAnu2.chr2                    C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panTro4.chr3                    125130989 2915 - 202329955 I
e gorGor3.chr3                    122173828 5208 - 199944510 I

a score=7424.000000
s hg38.chr14_KI270722v1_random        41407  39 +    194050 ggacat----------------------------------------------------------------------------------------------------------acaaagatggggagtgaaatttagtacttagaa
s nomLeu3.chr21_GL397661_2_random     16077  43 +    139590 ggaaatctag------------------------------------------------------------------------------------------------------aagaagatgggtgggaaagccgagtgctcagaa
i nomLeu3.chr21_GL397661_2_random C 0 N 0
s macFas5.chr2                    192316212 141 + 192460366 ggatgtctaaaaggacttggtgggaaaactgagcgctcagaagaacaagggtaacaatgggacaaagtgaaagcagacattctgcttgtttaaatttcttaaggcatttattacaaagagggggagtgaa----agtactcagaa
i macFas5.chr2                    C 0 C 0
s papAnu2.chr2                    187287567 141 - 187378091 GGATGTCTAAAAGGACTTGGTGGGAAAACTGAGCGCTCGGAAGAAcaagggtaacaatgggacaaagtgaaagcagacattctgcttgtttaaatttcttaaggCATTTATTACAAAGAGGGGGAGTGAA----AGTACTCAGAA
i papAnu2.chr2                    C 0 C 0
e ponAbe2.chr3                    159750323 26886 - 202140232 I
e panPan1.JH650580                 19611757 139 -  19803153 I
e panTro4.chr3                    125130989 2915 - 202329955 I
e gorGor3.chr3                    122173828 5208 - 199944510 I

a score=273.000000
s hg38.chr14_KI270722v1_random     41446 1 +    194050 t
s macFas5.chr2                 192316353 1 + 192460366 t
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187287708 1 - 187378091 T
i papAnu2.chr2                 C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19611757 139 -  19803153 I
e panTro4.chr3                 125130989 2915 - 202329955 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=1092.000000
s hg38.chr14_KI270722v1_random     41447 2 +    194050 tt
s panPan1.JH650580              19611896 2 -  19803153 TT
i panPan1.JH650580             I 139 I 4048
s macFas5.chr2                 192316354 2 + 192460366 tt
i macFas5.chr2                 C 0 C 0
s papAnu2.chr2                 187287709 2 - 187378091 TT
i papAnu2.chr2                 C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panTro4.chr3                 125130989 2915 - 202329955 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=410940.000000
s hg38.chr14_KI270722v1_random     41449 1644 +    194050  
s macFas5.chr2                 192316356 1647 + 192460366  
i macFas5.chr2                 C 0 N 0
s papAnu2.chr2                 187287711 1646 - 187378091  
i papAnu2.chr2                 C 0 N 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19611898 4048 -  19803153 I
e panTro4.chr3                 125130989 2915 - 202329955 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=0.000000
s hg38.chr14_KI270722v1_random     43093 960 +    194050  
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19611898 4048 -  19803153 I
e panTro4.chr3                 125130989 2915 - 202329955 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=107433.000000
s hg38.chr14_KI270722v1_random     44053 1274 +    194050  
s panTro4.chr3                 125133904 1274 - 202329955  
i panTro4.chr3                 I 2915 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19611898 4048 -  19803153 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=573.000000
s hg38.chr14_KI270722v1_random     45327 2 +    194050 ca
s panTro4.chr3                 125135178 2 - 202329955 ca
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19615946 2 -  19803153 CA
i panPan1.JH650580             I 4048 I 1056
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=23556.000000
s hg38.chr14_KI270722v1_random     45329 298 +    194050 ----gctcctgagtgtgccatatgtgggaatgggaaaaagtgaaattaaatgaactggaggatttggaagcacaaataaaaaaggcaaggcagcttattgggtaaatcaaattactgataaacatcctatctgtgaaataactatccagggaaagaactttaaaggtttggtagatactattttttttttttggtaggagtggacatttcaatcatttctctacagcactggctgtccatgtggccaattcagcccactcaatttaacacagtggaaactgctaaagctccagaagtgtatc
s panTro4.chr3                 125135180 297 - 202329955 atcagctcctgattgtgctgtatgtggggatgggaaaaagtgaaattaaatgaacaggaggatttggaagcacaaataaaaaagggaaagcagcttattgggtaaatccaattactgataaacatcctacctgtgaaataactatccagggaaagaactttaaaggtttggtagatactattttttt-----ggtagaagcagacatttcaatcatttctctacagcactggccgtccacgtggccaattcaacccactcaatttaacatagtcgaagttggtaaagccccagaaatatatc
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19615948 1056 -  19803153 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=175975.000000
s hg38.chr14_KI270722v1_random     45627 761 +    194050  
s panTro4.chr3                 125135477 760 - 202329955  
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27480523 712 -  28733288  
i nomLeu3.chr24                N 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19615948 1056 -  19803153 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=546.000000
s hg38.chr14_KI270722v1_random     46388 1 +    194050 a
s panTro4.chr3                 125136237 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19617004 1 -  19803153 A
i panPan1.JH650580             I 1056 I 645
s nomLeu3.chr24                 27481235 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=819.000000
s hg38.chr14_KI270722v1_random     46389 3 +    194050 aaa
s panTro4.chr3                 125136238 3 - 202329955 aaa
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27481236 3 -  28733288 aaa
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617005 645 -  19803153 I
e gorGor3.chr3                 122173828 5208 - 199944510 I

a score=207.000000
s hg38.chr14_KI270722v1_random     46392 1 +    194050 g
s panTro4.chr3                 125136241 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122179036 1 - 199944510 a
i gorGor3.chr3                 I 5208 I 5650
s nomLeu3.chr24                 27481239 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617005 645 -  19803153 I

a score=160448.000000
s hg38.chr14_KI270722v1_random     46393 641 +    194050  
s panTro4.chr3                 125136242 642 - 202329955  
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27481240 651 -  28733288  
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617005 645 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=6550.000000
s hg38.chr14_KI270722v1_random     47034 13 +    194050 tgaaaccccgtct
s panTro4.chr3                 125136884 13 - 202329955 tgaaaccccatct
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19617650 13 -  19803153 tgaaaccccatct
i panPan1.JH650580             I 645 I 7381
s nomLeu3.chr24                 27481891 13 -  28733288 tgaaaccctgtct
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=43093.000000
s hg38.chr14_KI270722v1_random     47047 167 +    194050 ctactaaaaatacaaaaaattagctgggtgaggtggcgggcgcctatagtcccagctactcaggaggctgaggcaggagaatggcatgaacccgggaggcaaaacttCAGGTTTTGCCAAGAATGACACTGTAAATGTAACAAAGCTTCTGTGCTTGTTAGTGAACA
s panTro4.chr3                 125136897 167 - 202329955 ctactaaaaatacaaaaaattaactgggcaaggtggcgggtgcctatagtcccagctactcaggaggctgaggcaggagaatggcatgcacccggcaggtaaaacttCAGGTTTTGCCAAGAATGACACTGTAAATGTAACAAAGCTTCCGTGCTTGTTAGTGAACA
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27481904 167 -  28733288 ctactaaaaatacaaaaaattagctgggcgaggtggcgggcacctatagtcccagctacttgggaggctgaggcaggagaatgacgtgcacccaggaggcaaaacttCAGGTTTTGCCAAGAATGACTCTGTAAATGTAACAAAGCTTTTGTGCTTGTTAGTGAACA
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=600.000000
s hg38.chr14_KI270722v1_random     47214 1 +    194050 C
s panTro4.chr3                 125137064 1 - 202329955 C
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27482071 1 -  28733288 C
i nomLeu3.chr24                C 0 C 0
s micMur1.scaffold_101245           1536 1 +      1664 C
i micMur1.scaffold_101245      N 0 N 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=16842.000000
s hg38.chr14_KI270722v1_random     47215 67 +    194050 CAAATCAGCTACTCTCCTGTATTCGGAGATCAGGATGAAATGAAAAGAACAAGCAggccgggtgcgg
s panTro4.chr3                 125137065 67 - 202329955 CAACTCAGCCACTCTCCTGTATTCGCACATCAGGATGAAATGAAAAGAACAAGCAggccaggtgcgg
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27482072 67 -  28733288 CAACTCAGTTACTCTCCTGTATTCGGACATCAGGATGAAATGAAAAGAACAAGCAggccaggtgcag
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=125852.000000
s hg38.chr14_KI270722v1_random     47282 284 +    194050 tggctcatgtctgtaatgtcaacactttgggaggcttaggtgtgcggatcacccgaggttgggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatgcaaaatgagctgggcatggtggcacaagcctgtaatcccagct---ttggaggctaaggcaggataagtgcttaaacctgagaggcggaggttgctgtgaggcaatattgc-accattgcactccagcctgggcaaaaagagtgaaactccatctcaaaaaaataaaaa--------atat
s panTro4.chr3                 125137132 294 - 202329955 tggctcatgcctataatcccaacactttggggggcttagacgggtggatcacctgaggttgggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaacttagccaggcatggtagcacatgcctgtaatcccagctacttgggaggctgaggcaggataagtgcttaaacccgagaggtggaggttgtggtgaggcgatattgc-accactgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaataaaaa-taaaaaaataa
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27482139 284 -  28733288 tggctcatgcctgtaatcctaacactttgggaggcttaggcgggcggatcacctgaggttgggagttcgagaccagcctgatcaatatggagaaaccctgtctctactaaaaaaacaaa-ttagctgggtgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggataagtgcttaaacctgagaggcggaggttgcagtgaggcaatattgc-accattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaa----------ag
i nomLeu3.chr24                C 0 C 0
s papAnu2.JH684932                174711 296 -    231459 tggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtcaggagctcaagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagtcgggcgcggtggcgggtgcctgtaatcccagctacttgggaggctgaagcaggatacgtgcttgaacccgggaggcggaggctgcattgagccgatATTGctaccattgctctccagcctgggcaacaagagcgaaactccgtctcaaaaaaaaaaccaacaaaagattaa
i papAnu2.JH684932             N 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=131929.000000
s hg38.chr14_KI270722v1_random     47566 159 +    194050 aaaaaGACCCCCAACCTTGTCTAGACTGTGGGGTTTCAGTTTCACCCCAGGGGGGTCCTGGTTGGGTTAGAACCCTGAATCTGGTTTGAGTTCGAATCCTAAAGAATAAAGGGAATAAAGGCTGTAGCCACTGAGCTACTCAATCTGGTCTGGTTCTGG
s panTro4.chr3                 125137426 159 - 202329955 aaaaaGACCCCCAACCTTGTCTAGACTGTGGGGTTTCAGTTTCACCCCAGGGGGGTCCTGGTTGGGTTAGAACCCTGAATCTGGTTTGAGTTCTAATCCTAAAGAATAAAGGGAATAAAGGCTGCAGCCACTGAGATACTCAATCTGGTCTGGTTCTGG
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27482423 158 -  28733288 ataaagaCCCCCAACCTTGTCTAGACTGT-GGGTTTCAGTTTCACTCCAGGGGGATCCTGGTTGGGTTAGAACCCTGAATCTGGTTTGAGTTCAAATCCTAAAGAATAAAGGGAATAAAGGCTGCAGCCACTGAAATACTCAAGCTGGTCTGGTTCTGG
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225488019 156 - 229590362 AAAAAGACCCCCACCCTTGTCTAGAC--T-GCGTTTCAGTCTCACCCCAGGGGGATCCTGGTTGGGTTAGAACCCTGCATCTGGTTTGAGTTCAAATCCTAAAGAATAAAGTGAATAAAGGCTGCAGTCACGGAGATACTCAATCTGGTCTGGTTCTGG
i rheMac3.chr1                 N 0 C 0
s papAnu2.JH684932                175007 158 -    231459 aaaaagacccCCACCCTTGTCTAGACTGT-GCGTTTCAGTCTCACCCCAGGGGGATCCTGGTTGGGTTAGAACCCTGCATCTGGTTTGAGTTCAAATCCTAAAGAATAAAGTGAATAAAGGCTGCAGTCACTGAGATACTCAATCTGGTCTGGTTCTGG
i papAnu2.JH684932             C 0 C 0
e ponAbe2.chr3                 159750323 26886 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=116215.000000
s hg38.chr14_KI270722v1_random     47725 92 +    194050 CTTTTGTGTGTCTATCTGTATTTTTGGTCT-AAATATTTGGCCCAACAGAAGTTAAAGCCTTTGATGTTCTCAGCAAAAGCCTTGTGAGATCT
s panTro4.chr3                 125137585 93 - 202329955 CTTTTGTGTGTCTATCTGTATTTTTGGTCTAAAATATTTGGCTCAACAGAGGTTAAAGGCTTTGATGGTCTCAGCAAAAGGCTTGTGCGACCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159777209 93 - 202140232 CTTTTGTGTGTCTATCTGTATTTTTGGTCTAAAATATTTGGCCCAACAGAGGCTAAAGGCTTTGATGGTCTCAGCAAAAGCCTTGTGAGATCT
i ponAbe2.chr3                 I 26886 C 0
s nomLeu3.chr24                 27482581 93 -  28733288 CTTTTGTGTGTCTATCTGTATTTTTGGTCTAAAATATTTGGCCCAACAGAGGTTAAAGGCTTTGATGGTCTCAGCAAAAACCTTGTGAGATCT
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225488175 93 - 229590362 CTTTTGTGTGTCTATCTGTATTTTTGGTCTAAAATATTTGGCCCAAGAGAGGTTAAAGGCTGTGATGGTCTCAACGAAAGCCTTGTGAGATCT
i rheMac3.chr1                 C 0 C 0
s papAnu2.JH684932                175165 93 -    231459 CTTTTGTGTGTCTATCTGTATTTTTGGTCTAAAATATTTGGCCCAAGAGAGGTTAAAGGCTGTGATGGTCTCAACGAAAGCCTTGTGAGATCT
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=106.000000
s hg38.chr14_KI270722v1_random     47817 1 +    194050 G
s panTro4.chr3                 125137678 1 - 202329955 C
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159777302 1 - 202140232 C
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27482674 1 -  28733288 C
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225488268 1 - 229590362 C
i rheMac3.chr1                 C 0 C 0
s papAnu2.JH684932                175258 1 -    231459 C
i papAnu2.JH684932             C 0 C 0
s micMur1.scaffold_4146            88958 1 -    142280 t
i micMur1.scaffold_4146        N 0 N 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=202568.000000
s hg38.chr14_KI270722v1_random     47818 175 +    194050 TAG--TTTATCTGTGTGCTCAACTGGAACAAAGAGACTCCATAAACT-AGAAAAACCTAAAGAAAATGGCACGCGTGAAAAAATGAGAGCCAACTCCTGTTTGTTGTTCTGTCCACCTCCCTATCTCACTCCTCCTTCTGCCTTTGCTGTGgtcccttggtgtttctgtctttctggg
s panTro4.chr3                 125137679 175 - 202329955 TAG--TTTATCTGTGTGCTCAATTGGAACAAAGAGACTCCATAAACT-AGAAAAACCTAAAGAAAATGGCAGATGTGAAAAATTGAGAGCCAACTCCTCTTTGTTGTTCTGTCCACCTCCCTCTCTCACTCCTCCTTCTGCCTTTGCTGTGgtcccatggtgtttctctctttctggg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159777303 175 - 202140232 TAG--TTTATCTGTGTGCTCAACTGGAACAAAGAGACTCCATAAACT-AGAAAAACCTAAAGAAAATGGCACATGTGAAAAATTGAGAGCCAACTCCTGTTTGTTGTTCGGTCTACCTCCCTCCCTCCCTCCTCCTCCTGCCTTTGCTGTGGTCCCATGGTGTTTCTGTCTTTCTGGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27482675 175 -  28733288 TAGTTTTTATCTGTGTGCTCAAATGGAACAAAGAGACTCCATAAACTAAAAAAAACCTAAAGAAAATGGCACACGTGAAAAATTGAGAGCCAACTCCTGTTAGTTGTTCTGCCCACCTCCCTCCCTCA---CTCCTTCTGCCTTTGCTGTGgtcccatggtgtttctgtctttctggg
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225488269 171 - 229590362 TAG--TTTATCTGTGTGCTCAGTTGGAACAAAGAGACTCCATAAACT-AGAAAAACCTACAGAAAATGGCACACATGAAGAATTTAGAA-CAACTCCTGTTTGCTCTTCTGTCCACCTCCCTCTCTCA---CTCCTTCTGCCTTTGCTGCGgtcccatggtgctcctgtctttctggg
i rheMac3.chr1                 C 0 C 0
s papAnu2.JH684932                175259 171 -    231459 TAG--TTTATCTGTGTGCTCAGTTGGAACAAAGAGACTCCATAAACT-AGAAAAACCTACAGAAAATGGCACACATAAAGAATTTAGAA-CAACTCCTGTTTGCTCTTCTGTCCACCTCCCTCTCTCA---CTCCTTCTGCCTTTGCTGTGGTCCCATGGTGCTCCTGTCTTTCTGGG
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=5608.000000
s hg38.chr14_KI270722v1_random     47993 4 +    194050 aacc
s panTro4.chr3                 125137854 4 - 202329955 gacc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159777478 4 - 202140232 GACC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27482850 4 -  28733288 gacc
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225488440 4 - 229590362 gacc
i rheMac3.chr1                 C 0 C 0
s papAnu2.JH684932                175430 4 -    231459 GACC
i papAnu2.JH684932             C 0 C 0
s tarSyr2.KE948750v1              495908 4 -    570046 AACA
i tarSyr2.KE948750v1           N 0 N 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=682393.000000
s hg38.chr14_KI270722v1_random     47997 593 +    194050  
s panTro4.chr3                 125137858 611 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159777482 594 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27482854 613 -  28733288  
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225488444 591 - 229590362  
i rheMac3.chr1                 C 0 I 9904
s papAnu2.JH684932                175434 595 -    231459  
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I

a score=9574.000000
s hg38.chr14_KI270722v1_random     48590 15 +    194050 tgtgcccagcctata
s panTro4.chr3                 125138469 15 - 202329955 tgcacccagccCata
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159778076 15 - 202140232 tgcgcccagcctata
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27483467 15 -  28733288 tgcgcccagcccata
i nomLeu3.chr24                C 0 C 0
s papAnu2.JH684932                176029 15 -    231459 cacacctggcctcta
i papAnu2.JH684932             C 0 I 837
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=790510.000000
s hg38.chr14_KI270722v1_random     48605 1569 +    194050  
s panTro4.chr3                 125138484 1609 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159778091 1610 - 202140232  
i ponAbe2.chr3                 C 0 M 354
s nomLeu3.chr24                 27483482 1573 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e papAnu2.JH684932                176044  837 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=35976.000000
s hg38.chr14_KI270722v1_random     50174 146 +    194050 ggattacaggtgtgagccaccatgcccagcctatttttgaaattttagttattttaaattaaataatagatactcattaaatatccgggttatttccaattt-aaaacttatgttttaggccaggcactgtggctcatgcttgtaat
s panTro4.chr3                 125140093 147 - 202329955 ggattacaggtatgagctaccatgcccagcctatttttgaaattttaattacgttaaattaaataatagatactcattaaatatctgggttatttccaatttaaaaacttatgttttagcccaggtgcggtggctcacgcctgtaat
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27485055 147 -  28733288 ggattacaggtgtgagccaccatgcccagcctattttggaagttttagttatgttaaattaaataatagatactcattaaatatctgggttatttccaatttaaaaacttatgttttagcccaggcgtggtggctcacgcctgtaat
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159779701 354 - 202140232 M
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e papAnu2.JH684932                176044 837 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=10976.000000
s hg38.chr14_KI270722v1_random     50320 25 +    194050 cccaacactttggaaggccaaggtg
s panTro4.chr3                 125140240 25 - 202329955 cccagccctttgggaggccaaggcg
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27485202 25 -  28733288 cccagcattttgggaggccgaggca
i nomLeu3.chr24                C 0 C 0
s papAnu2.JH684932                176881 25 -    231459 cccagcactttgggaggctgaggtg
i papAnu2.JH684932             I 837 C 0
e ponAbe2.chr3                 159779701 354 - 202140232 M
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=1316679.000000
s hg38.chr14_KI270722v1_random     50345 1711 +    194050  
s panTro4.chr3                 125140265 1720 - 202329955  
i panTro4.chr3                 C 0 I 2
s ponAbe2.chr3                 159780064 1720 - 202140232  
i ponAbe2.chr3                 M 354 C 0
s nomLeu3.chr24                 27485227 1712 -  28733288  
i nomLeu3.chr24                C 0 C 0
s papAnu2.JH684932                176906 1688 -    231459  
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=-421.000000
s hg38.chr14_KI270722v1_random     52056 7 +    194050 caataaa-
s ponAbe2.chr3                 159781784 6 - 202140232 -aataaa-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27486939 3 -  28733288 ----aaa-
i nomLeu3.chr24                C 0 C 0
s papAnu2.JH684932                178594 7 -    231459 -aaaaaaa
i papAnu2.JH684932             C 0 I 5795
e panPan1.JH650580              19617663 7381 -  19803153 I
e panTro4.chr3                 125141985 2 - 202329955 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=25678.000000
s hg38.chr14_KI270722v1_random     52063 109 +    194050 ctgtcattctgttttggtcaaatgttttcaattttttgacatctttgctaaaacttagttgataacattgtatgggaagcattgccaaaagataagtaacactaaa-----------tct--
s ponAbe2.chr3                 159781790 120 - 202140232 ctgtcattctgttttggtcaaatgtttttaattttttgacatctttgctaaaacttagttgataacattgtatgggaagcattgccaaaaaataagtaatgctaaaacaacttcttcttt--
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27486942 116 -  28733288 ctgtcattctgttttggtcaaatgtttttaattttttgacatctttgctaaaacttagttgataacattgtataggaagcattgccaaaaatccagtaacactaaa------tcttcttttt
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e panTro4.chr3                 125141985   2 - 202329955 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=329101.000000
s hg38.chr14_KI270722v1_random     52172 670 +    194050  
s panTro4.chr3                 125141987 669 - 202329955  
i panTro4.chr3                 I 2 C 0
s ponAbe2.chr3                 159781910 670 - 202140232  
i ponAbe2.chr3                 C 0 I 1449
s nomLeu3.chr24                 27487058 669 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=10624.000000
s hg38.chr14_KI270722v1_random     52842 55 +    194050 TGCAGTGCTGGAGGCTGTGCAGGGCATGTTGCTAGGCGTGGCACAgggcacggtg
s panTro4.chr3                 125142656 55 - 202329955 cgcggtgctggacactgtgcagggcttggttctgggcatggtgcagggcacggtg
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27487727 55 -  28733288 CGCGGTGCTGGATGCCAtgcacggcgcggtgctgggcgcggtgcagggcgcggtg
i nomLeu3.chr24                C 0 I 619
e ponAbe2.chr3                 159782580 1449 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I

a score=49715.000000
s hg38.chr14_KI270722v1_random     52897 609 +    194050  
s panTro4.chr3                 125142711 622 - 202329955  
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159782580 1449 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122179037 5650 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=91.000000
s hg38.chr14_KI270722v1_random     53506 1 +    194050 t
s gorGor3.chr3                 122184687 1 - 199944510 t
i gorGor3.chr3                 I 5650 I 1223
e ponAbe2.chr3                 159782580 1449 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e panTro4.chr3                 125143333 0 - 202329955 C
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=45061.000000
s hg38.chr14_KI270722v1_random     53507 550 +    194050  
s panTro4.chr3                 125143333 548 - 202329955  
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159782580 1449 - 202140232 I
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122184688 1223 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=98359.000000
s hg38.chr14_KI270722v1_random     54057 385 +    194050 tccactggtgatacccaggcaaaaagggtctggagtggacctccagcaaactcgagcaaacctgcagcagagggacctgactgttagaaggaaaactaacaaacagaaaggaatagtatcaacagcaccaacatcaaagaccaaaggtagataaatccacaaagatggg-agaaaccagtgcaaaaaggctgaaaactccaaaagccagaatgcatcttctcctccagaagatcacaactccccgccagcaagggaacaaaactggacagacaatgagtttgacgaattgacagaagtaggcttcagaaggcgggtaataacaaactcctccgagctaaaggagcatgttctaactcaatgcaaggaagctaagaacctg-aaaaaa
s panTro4.chr3                 125143881 387 - 202329955 tccactggtgatacccaggcaaacagggtctggagtggacctccagcaaacttcagcagacctgcagcagagggacctgactgttagaaggaaaactaacaaacagaaaggaatagtatcaacatcaccaacatcaaaggccaaaggtagataaatccacaaaaatggggagaaaccagtgcaaaaaggctgaaaactccaaaagccagaatgcctcttctcctccaaaggatcacaactccccgccagcaagggaacaaaactggacagaccgtgagtttgacaaattgacagaagtaggcttcagaaggcggataataacaaactcctctgagctaaaggagcatgttctaacccaatgcaaggaagctaagaacctggaaaaaa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159784029 386 - 202140232 tccactggtgatacacaggaaaacagggtctggagtggacctccagcaaactccagcagacctgcagcagagggacctgactgttagaaggaaaactaacaaacagaaaggaatagtatcaacattaccaacatcaaagaccaaaggtagataaatccacaaagatggggagaaaccagtgcaaaaaggctgaaaactcccaaagccaaaatgcctcttctcttccaaaggatcataactcctccccagcaagggaacaaaactggacagagaatgagtttgacgaattgacagaagtagacttcagaaggcaggtaataacaaactcctctgagctaaaggagcatgttctaacccaatgcaaggaagctaagaacctggaaaaa-
i ponAbe2.chr3                 I 1449 C 0
e panPan1.JH650580              19617663 7381 -  19803153 I
e gorGor3.chr3                 122184688 1223 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=1092.000000
s hg38.chr14_KI270722v1_random     54442 2 +    194050 aa
s panTro4.chr3                 125144268 2 - 202329955 aa
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19625044 2 -  19803153 aa
i panPan1.JH650580             I 7381 I 290
s ponAbe2.chr3                 159784415 2 - 202140232 aa
i ponAbe2.chr3                 C 0 C 0
e gorGor3.chr3                 122184688 1223 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=74593.000000
s hg38.chr14_KI270722v1_random     54444 290 +    194050 ggttaaatgaattgttaactagaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacccagcacaagaacttcatgaagcatacacaagtatcaatagctgaatcaatcaagcaggagaaaggatatcagagattgaagatcaactcaatgaaataaagcaagaagacaagattaaagaaaaaagagtgaaaagaaatgaacaaagcctccaagaaatagaggactatgttaaaagactgaatctacgtttgactggtgtacctgtaagtgacaga
s panTro4.chr3                 125144270 290 - 202329955 ggttagatgaattgctaactagaataaccagtttagagaagaacaaaaatgacctgatggagctgaaaaacccagcacaagaacttcaggaagcatacacaagtatcaatagctgaatcaatcaagcagaagaaaggatatcagagattgaagatcaactcaatgaaataaagcaagaagacaagattagagaaaaaagagtaaaaagaaatgaaaaaagcctccaagaaatagaggactatgtgaaaagacttaatctacgtttgattggtgtacctgaaagtgacggg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159784417 290 - 202140232 ggttagatgaattgctaaatagaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacacagcacgagaacttcatgaagcatacacaagtatcaatagccaaatcaatcaagcagaagaaaggatatcagagattgaagatcaactcaatgaaataaagcaagaagacaagattagagaaaaaagagtgaaaagaaatgaacaaagcctccaagaaatagaggaatacatgaaaagactgaatctatgtttgattggtgtacctgaaagtgacggg
i ponAbe2.chr3                 C 0 C 0
e panPan1.JH650580              19625046 290 -  19803153 I
e gorGor3.chr3                 122184688 1223 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=1000.000000
s hg38.chr14_KI270722v1_random     54734 1 +    194050 g
s panTro4.chr3                 125144560 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19625336 1 -  19803153 g
i panPan1.JH650580             I 290 I 1622
s gorGor3.chr3                 122185911 1 - 199944510 g
i gorGor3.chr3                 I 1223 I 1622
s ponAbe2.chr3                 159784707 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=77100.000000
s hg38.chr14_KI270722v1_random     54735 309 +    194050 agaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagcaagacaggccaacattcaaattcaggaaatacagagaacaccactaagacacttctcaagaagagcaaccccaagacacaaaatcatcagattcaccaaggttgaaatgaaggagaacatattaagggcagccagagagaaaggttgagttacccacaaagggaagcccatcagactaacagtggatctcttggcagaaagcctacaagccagaagagagtgggggccaatacacaacattccta
s panTro4.chr3                 125144561 309 - 202329955 agaatggaaccaagttggaaaacactcttaaggatattatccaggagaatttccccaacctagcaagacaggccaacattcaaattcaggaaatacagagaacaccactaagatactcctcaagaagagtgaccccaagacagaaaatcgtcagactcatcaaggttgaaatgacggaaaaaatgttaagggcagccagagagaaagcttgagttatccacaaagggaagcccatcagactaacagctgatctcttggcagaaaccctacaagccagaagagagtaggggccaatattcaacattccta
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159784708 309 - 202140232 agaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagaaagacaggccaacattcaaattcaggaaatacagagaacaccacaaaggtattccttgagaagagcaaccccaagacacataatcatcagattcaccaaggttgaaatgaagggaaaaatgttaagggcagccagagagaaaggttgagttacccacaaaaggaagcccatcagactaacaccggatctcttggcagaaactctacaagccagaagagagtgggggccaatattcaacattccta
i ponAbe2.chr3                 C 0 C 0
e panPan1.JH650580              19625337 1622 -  19803153 I
e gorGor3.chr3                 122185912 1622 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=643143.000000
s hg38.chr14_KI270722v1_random     55044 1309 +    194050  
s panTro4.chr3                 125144870 1313 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159785017 1319 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     16550 1333 +     87690  
i macFas5.chr5_KE145639_random N 0 C 0
e panPan1.JH650580              19625337 1622 -  19803153 I
e gorGor3.chr3                 122185912 1622 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782  619 -  28733288 I

a score=1365.000000
s hg38.chr14_KI270722v1_random     56353 1 +    194050 a
s panTro4.chr3                 125146183 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19626959 1 -  19803153 a
i panPan1.JH650580             I 1622 I 1999
s gorGor3.chr3                 122187534 1 - 199944510 a
i gorGor3.chr3                 I 1622 I 2000
s ponAbe2.chr3                 159786336 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     17883 1 +     87690 a
i macFas5.chr5_KE145639_random C 0 C 0
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=30429.000000
s hg38.chr14_KI270722v1_random     56354 66 +    194050 cccttcaaaaaa-tcaatgaatccaggagctgttttttttcgaagatcaacaaaacagaccactagc
s panTro4.chr3                 125146184 67 - 202329955 ctcttcaaaaaaatcaatgaatccaggagctggttttttgaaaagatcaacaaaatagaccactagc
i panTro4.chr3                 C 0 I 76
s ponAbe2.chr3                 159786337 66 - 202140232 cccttcaaaaaa-tcagtgaatccaggagctggttttttgaaaagatcaacaaaatagaccactagt
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     17884 67 +     87690 cccttcaaaaaaatcaatgaatccaggagctggctttttgaaaagatcgacaaaatagactgctagc
i macFas5.chr5_KE145639_random C 0 C 0
e panPan1.JH650580              19626960 1999 -  19803153 I
e gorGor3.chr3                 122187535 2000 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=25556.000000
s hg38.chr14_KI270722v1_random     56420 106 +    194050 cagactaatgaagaagaaaagagagaagaatcaaatagatgcaat-aaaaaatgattaaggggatatcacaactgatcccacagaaatacaaattatcatcagcgaa
s ponAbe2.chr3                 159786403 106 - 202140232 cagactaataaagaagaaaagagagaagaatcaaatagatgcaat-aaaaaatgataaaggggatatcaccaccaatcccacagaaatagaaattaccatcagacaa
i ponAbe2.chr3                 C 0 I 70
s macFas5.chr5_KE145639_random     17951 107 +     87690 cagactaataaagaagaaaagagagaaaaatcaaatagatgcaataaaaaaatgataaaggggatatcaccaccaatcccacagaaatacaaattaccatcagagaa
i macFas5.chr5_KE145639_random C 0 C 0
e panPan1.JH650580              19626960 1999 -  19803153 I
e panTro4.chr3                 125146251  76 - 202329955 I
e gorGor3.chr3                 122187535 2000 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=587847.000000
s hg38.chr14_KI270722v1_random     56526 1216 +    194050  
s panTro4.chr3                 125146327 1214 - 202329955  
i panTro4.chr3                 I 76 C 0
s ponAbe2.chr3                 159786579 1210 - 202140232  
i ponAbe2.chr3                 I 70 C 0
s macFas5.chr5_KE145639_random     18058 1263 +     87690  
i macFas5.chr5_KE145639_random C 0 I 1
e panPan1.JH650580              19626960 1999 -  19803153 I
e gorGor3.chr3                 122187535 2000 - 199944510 I
e papAnu2.JH684932                178601 5795 -    231459 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782  619 -  28733288 I

a score=538081.000000
s hg38.chr14_KI270722v1_random     57742 642 +    194050  
s panTro4.chr3                 125147541 642 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159787789 643 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     19322 646 +     87690  
i macFas5.chr5_KE145639_random I 1 C 0
s papAnu2.JH684932                184396 645 -    231459  
i papAnu2.JH684932             I 5795 C 0
e panPan1.JH650580              19626960 1999 -  19803153 I
e gorGor3.chr3                 122187535 2000 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=7833.000000
s hg38.chr14_KI270722v1_random     58384 4 +    194050 caaa
s panTro4.chr3                 125148183 4 - 202329955 caaa
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19628959 4 -  19803153 caaa
i panPan1.JH650580             I 1999 I 90
s gorGor3.chr3                 122189535 4 - 199944510 caaa
i gorGor3.chr3                 I 2000 I 1777
s ponAbe2.chr3                 159788432 4 - 202140232 caaa
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     19968 4 +     87690 caaa
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                185041 4 -    231459 caaa
i papAnu2.JH684932             C 0 C 0
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=68853.000000
s hg38.chr14_KI270722v1_random     58388 90 +    194050 tttacaagaaaa---aacaa----cctcattgaaaagtgggcggaggatgtgaacagacacttctcaaaagaggacaattatgcaaccaacaaactt
s panTro4.chr3                 125148187 93 - 202329955 tttacaaaaaaa---aaaaaa-aatcctatcaaaaagtgggcaaaggatgtgaacagacacttcttaaaagaggacaattatgcaaccaacaaacat
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159788436 94 - 202140232 tttacaagaaaa---aacaaacaaccccatcaaaaagtgggcaaaggatgtgaacagacacttctcaaaagaagacaattatgctgccaacaaacat
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     19972 90 +     87690 tttacaagaaaa---aacaa----ccccatcaaaaagtgggcaaaggatgtgaacagacacttctcaaaagaagacaattatgcagccaacaaacat
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                185045 93 -    231459 tttacaagaaaaaacaacaa----ccccatcaaaaagtgggcaaaggatgtgaacaggcacttctcaaaagaagacaactatgcagccaacaaacat
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19628963 90 -  19803153 I
e gorGor3.chr3                 122189539 1777 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=2730.000000
s hg38.chr14_KI270722v1_random     58478 2 +    194050 at
s panTro4.chr3                 125148280 2 - 202329955 at
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19629053 2 -  19803153 at
i panPan1.JH650580             I 90 I 1649
s ponAbe2.chr3                 159788530 2 - 202140232 at
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     20062 2 +     87690 at
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                185138 2 -    231459 at
i papAnu2.JH684932             C 0 C 0
e gorGor3.chr3                 122189539 1777 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=677896.000000
s hg38.chr14_KI270722v1_random     58480 827 +    194050  
s panTro4.chr3                 125148282 827 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159788532 824 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     20064 835 +     87690  
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                185140 837 -    231459  
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19629055 1649 -  19803153 I
e gorGor3.chr3                 122189539 1777 - 199944510 I
e rheMac3.chr1                 225489035 9904 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=963773.000000
s hg38.chr14_KI270722v1_random     59307 826 +    194050  
s panTro4.chr3                 125149109 832 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159789356 829 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225498939 819 - 229590362  
i rheMac3.chr1                 I 9904 C 0
s macFas5.chr5_KE145639_random     20899 823 +     87690  
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                185977 790 -    231459  
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19629055 1649 -  19803153 I
e gorGor3.chr3                 122189539 1777 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=14898.000000
s hg38.chr14_KI270722v1_random         60133 9 +    194050 gcaatggtg
s panTro4.chr3                     125149941 9 - 202329955 GCAATGGTG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159790185 9 - 202140232 TCAATGGTG
i ponAbe2.chr3                     C 0 C 0
s rheMac3.chr1                     225499758 9 - 229590362 GCAATGGTG
i rheMac3.chr1                     C 0 C 0
s macFas5.chr5_KE145639_random         21722 9 +     87690 gcaatggtg
i macFas5.chr5_KE145639_random     C 0 C 0
s papAnu2.JH684932                    186767 9 -    231459 GCAATGGTG
i papAnu2.JH684932                 C 0 C 0
s tupBel1.scaffold_137353.1-182384    171382 9 -    182384 GCAGGGGTG
i tupBel1.scaffold_137353.1-182384 N 0 N 0
e panPan1.JH650580                  19629055 1649 -  19803153 I
e gorGor3.chr3                     122189539 1777 - 199944510 I
e nomLeu3.chr24                     27487782 619 -  28733288 I

a score=9680.000000
s hg38.chr14_KI270722v1_random     60142 8 +    194050 aggagtaa
s panTro4.chr3                 125149950 8 - 202329955 GGGAGTAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159790194 8 - 202140232 GGCAGTAA
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225499767 8 - 229590362 GGGAGTAA
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     21731 8 +     87690 gggagtaa
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                186776 8 -    231459 GGGAGTAA
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19629055 1649 -  19803153 I
e gorGor3.chr3                 122189539 1777 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=2800.000000
s hg38.chr14_KI270722v1_random     60150 1 +    194050 c
s panTro4.chr3                 125149958 1 - 202329955 C
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19630704 1 -  19803153 C
i panPan1.JH650580             I 1649 I 273
s gorGor3.chr3                 122191316 1 - 199944510 c
i gorGor3.chr3                 I 1777 I 273
s ponAbe2.chr3                 159790202 1 - 202140232 C
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225499775 1 - 229590362 C
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     21739 1 +     87690 c
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                186784 1 -    231459 C
i papAnu2.JH684932             C 0 C 0
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=319208.000000
s hg38.chr14_KI270722v1_random     60151 273 +    194050 ctctcatgaacatataattagaaatctGTCAACCACTGTAGGTAACTTAGCAAATGAACTAGCTGAAGCCATAGCTACCAAACAAAGATCTTTAGACTCCTTAGCCAGGATAGTCATGGATGACGGAATAACTTTAGGCTACATAGTGGTGAAACAGGGAGAAATTCATATGGCAGCTAGCTAACACATCATGTTTTGTTTAAATCCGTACATCTTCTGAAGTTGAAACACATGTAAAAAAATAAGACAATATGGGAATTAATTATGACAAAT
s panTro4.chr3                 125149959 273 - 202329955 CTCTCATGAACGTATAATTAGAAATCTGTCAACCACTCTAGGTAACTTAGCAAATGAACTAGCTGAAGCCATAGCTACCAAATAAAGATCTTCAGACTCTTTAGCCAGGATAGTCATGGATGACGGAATAACTTTAGGCTACATAGTGGTGAAACAGGGAGAAACTCATATGGAAGCTAGCTAACACATCATGTTGTGTTTAGATCCATACATCTTCTGAAGTTGAAACACATGTAAAAAAATAAGACGATATGGGAATTAATTATGACAAAT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159790203 269 - 202140232 CGCTCATGAACGTATAATTAGAAATCTGTCAACCACTCTAGGTAACTTAGAAAATGAACTAGCTGAAGCCATAGCTACC----AAAGATCTTTAGACTCTTTAGCCAGGATAGTCGTGGATGATGGAATAACTTTAGGCTACAGAGTGCTGAAACAGGGAGAAATTCGTATGGCAGCTAGCTAACACATCATGCTGTGTTTAGGTCCATACATCTTCTGAAGTTGAAACACATGTAAAAAAATAAGATGATATGGGAATTAATTATGACAAAT
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225499776 265 - 229590362 CTCTCATGAACGTATAATTAGAAATCTGTCAACCACTCTAGGTAACTTAGCAAATGAAGTTGCTGAAGCCATAGCTACCAAACAAATATGTTTAGACTCTTGAGCCAGGATAGTCATGGATGACAGAATAACTTTAGGCTACAGAGTGGTGGAACCGGGAGAAATTCATATGGCAGCTAGCTAACATATCATGTTGTGTTTAGACCCATACATCTTCTGAAACTGAAACACATG--------TAAGGCGACACGTGAATTAATTACGACAAAT
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     21740 265 +     87690 ctctcatgaacgtataattagaaatctGTCAACCACTCTAGGTAACTTAGCAAATGAAGTTGCTGAAGCCATAGCTACCAAACAAATATGTTTAGACTCTTGAGCCAGGATAGTCATGGATGACAGAATAACTTTAGGCTACAGAGTGGTGGAACCGGGAGAAATTCATATGGCAGCTAGCTAACATATCATGTTGTGTTTAGACCCATACGTCTTCTGAAACTGAAACACATG--------TAAGGCGACACGTGAATTAATTACGACAAAT
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                186785 265 -    231459 CTCTCATGAACTTATAATTAGAAATCCGTCAACCACTCTAGGTAACTTAGCAAATGAAGTTGCTGAAGCCATAGCTACCAAACAAATATCTTTAGACTCTTGAGCCAGGATAGTCACGGATGACAGAATAACTTTGGGCTACAGAGTGATGGAACCGGGAGAAATTCATAGGGCAGCTAGCTAACGTATCATGTTGTGTTTAGACCCATACGTCTTCTGAAACTGAAACACATG--------TAAAGCGACACGTGAATTAATTACGACAAAT
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19630705 273 -  19803153 I
e gorGor3.chr3                 122191317 273 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=2800.000000
s hg38.chr14_KI270722v1_random     60424 1 +    194050 C
s panTro4.chr3                 125150232 1 - 202329955 C
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19630978 1 -  19803153 C
i panPan1.JH650580             I 273 I 118
s gorGor3.chr3                 122191590 1 - 199944510 C
i gorGor3.chr3                 I 273 I 118
s ponAbe2.chr3                 159790472 1 - 202140232 C
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225500041 1 - 229590362 C
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     22005 1 +     87690 C
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                187050 1 -    231459 C
i papAnu2.JH684932             C 0 C 0
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=149450.000000
s hg38.chr14_KI270722v1_random     60425 117 +    194050 CTAGGGAAgaggctgaaagagctgtaacacaaacagggctgagacatgccccttgcttgccacattgtgggcaaagagaaggaaagaagagccgtgaccctttgggaagcct-gacct
s panTro4.chr3                 125150233 118 - 202329955 CTAGGGAAgaggctgaaagagctgtaacacaagcagggctgagacatgccccttgctcgccacattgtgggcaaagagaaggaaagaagagctgtggccctttggggagcccagacct
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159790473 116 - 202140232 CTAGGGAAgaggctgaaagagctgtaacaca--cagggctgagacatgccccttgctcgccacactgtgggcaaagagaaggaaagaagagctgtggccccttggggagtccatatct
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225500042 118 - 229590362 CTGGGGAAgaggctgaaagagctgtaacacaaacagggctgagacatgccccttgctcgccacattgtgggcaaagagaaggcaagaagagctgcggtcctttggggagcccagccct
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     22006 118 +     87690 CTGGGGAAgaggctgaaagagctgtaacacaaacagggctgagacatgccccttgctcgccacattgtgggcaaagagaaggcaagaagagctgcggtcctttggggagcccagacct
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                187051 118 -    231459 CTGGGGAAGAGGCTGagagagctgtaacacaaacagggctgagacATGCCCCTTGCTCGCCACATTGTGGGCaaagagaaggcaggaagagCTGCggccctttggggagcccagacct
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19630979 118 -  19803153 I
e gorGor3.chr3                 122191591 118 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=2800.000000
s hg38.chr14_KI270722v1_random     60542 1 +    194050 g
s panTro4.chr3                 125150351 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19631097 1 -  19803153 g
i panPan1.JH650580             I 118 I 928
s gorGor3.chr3                 122191709 1 - 199944510 g
i gorGor3.chr3                 I 118 I 928
s ponAbe2.chr3                 159790589 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225500160 1 - 229590362 g
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     22124 1 +     87690 g
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                187169 1 -    231459 g
i papAnu2.JH684932             C 0 C 0
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=1168028.000000
s hg38.chr14_KI270722v1_random     60543 933 +    194050  
s panTro4.chr3                 125150352 928 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159790590 928 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225500161 940 - 229590362  
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     22125 940 +     87690  
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                187170 938 -    231459  
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19631098 928 -  19803153 I
e gorGor3.chr3                 122191710 928 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=7896.000000
s hg38.chr14_KI270722v1_random     61476 3 +    194050 ttg
s panTro4.chr3                 125151280 3 - 202329955 ttg
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19632026 3 -  19803153 ttg
i panPan1.JH650580             I 928 I 502
s gorGor3.chr3                 122192638 3 - 199944510 ttg
i gorGor3.chr3                 I 928 I 503
s ponAbe2.chr3                 159791518 3 - 202140232 ttg
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225501101 3 - 229590362 ttg
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     23065 3 +     87690 ttg
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                188108 3 -    231459 TTG
i papAnu2.JH684932             C 0 C 0
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=625190.000000
s hg38.chr14_KI270722v1_random     61479 504 +    194050 ttattgcctgtcttttgcataaaagccattttaatgggggtaagatgatatcttattgtagttttgatttgaatttctctgatgatcaatgatattgagcatcttttcatatacctatatgagatttatatatcttcttctttgtttttgctca-tattttgagacagggtctcactctgtcacccaggctggagtgcagtggtatgatgatggcttactgtagttttgactaccagggttcaagcaatcctcccacctcagcctcctgagtagctgggaccacaggcatgcatcaccatgcccaggtaggttttaaaattatttgctatgtttttcaggttggtcttgagctcctgggctcaagtggtccacctgtcttggctcccaaaagtgctggaattgcaggtgtgagccactgcgcctgacctgtttgccttcttttgagaaatgtctgttcggatcttttgcccatttaaataattggattattag-tttttttcttat
s panTro4.chr3                 125151283 503 - 202329955 ttattgcctgtcttttgcataaaagccattttaatgggg-taagatgatatcttgttgtagttttgatttcaagttctctgatgatcaatgatattgagcatcttttcatatccctatttgacatttatgtatcttcttttttgtttttgctca-ttttttgagacagggtctcactctgtcacccaggctggagagcagtagtatgatcatggcttaatgtagtgttgactgccagggttcaagcaatcctcccacctcagcctcctgagtagctgggaccacaggcatgcatcaccatgcccaggtagtttttaaaattatttgctatgttgttcagtttggtcttgaactcctgggctcaagtggtccacctgtcttggctccccaaagtgctggaattacaggtgtgagccactgcacctgagctgtgtgccttcttttgagaaatgtctgttcagatcttttgcccatttaaataattggattgttag-tttttttcttat
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159791521 503 - 202140232 ttattgcctgtcttttggataaagacaattttaatgggg-tgagatgatattttattgtatttttgatttgaatttctctgatgatcaatgatattgagcatcttttcatatacctatatgacacttatatatctttctttttgtttttgcttgtttttttgagacatggtctcactctgtcacccaggctggagtgcagtggcatgatcatggcttactgtagttttgactgccagggttcaagcaatcctcccacctcagcctcctgagtagctgggaccacaggcatgcatcaccgtgcccaagtagtttttaaaattatttgctatgttgttcaggttggtcttgaactcctgggctcaagtggtccacctgccttggcttccaaaagtgctggaattacaggtgtgagccaccgtgcctgacctgtatgtcttcttttgagaaatgtctattcagatc-tttgcccatttaaataattggattattag-tttttttcttac
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225501104 503 - 229590362 ctgttgcctgtctttcggataaaagccattttaatgggg-tgagatggtatctcattgtagttttggtttgaatttctctgatgatcaatgatattgagcatcttttcatatacctgtttgacatttatatatcttcttttttgtttttgcttg-ttttctgagacagggtctcactctgtcacccaggttggagtgcagtggcatgatcatagcttactgtagttttgactgccagggctcaagcaatcctcccacctcagcctcctgagtagctgggactgcaggcatacatcactatgcccagggagtttttaaaattctttgctatgttattcaggttggtcttgaactcctgggctcaaggggtccacctgccttggctcctcaaagtgctggaattacaggtgtgagccactgcgcctgacctgtatgccttcttttgagaaatgtctattcagatcttttgcccatttaaataattggattattag-tttttttcttat
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     23068 503 +     87690 ctgttgcctgtctttcggataaaagccattttaatgggg-tgagatggtatctcattgtagttttggtttgaatttctctgatgatcaatgatattgagcatcttttcatatacctgtttgacatttatatatcttcttttttgtttttgcttg-ttttctgagacagggtctcactctgtcacccaggttggagtgcagtggcatgatcatggcttactgtagttttgactgccagggctcaagcaatcctcccacctcagcctcctgagtagctgggactgcaggcatacatcaccatgcccagggagttttaaaaattctttgctatgttgttcaggttggtcttgaactcctgggctcaaggggtccacctgccttggctcctcaaagtgctggaattacaggtgtgagccactgcgcctgacctgtatgccttcttttgagaaatgtctattcagatcttttgcccatttaaataattggattattag-tttttttcttat
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                188111 493 -    231459 CTGTTGCCTGTCTTtcggataaaagccattttaatgggg-tgagatggtatctcattgtagttttggtttgaatttctctgatgatcaatgatattgagcatcttttcatatacctatttgacatttatatatcttcttttttgtttttgcttg-ttttctgagacagggtctcactctgtcacccaggttggagtgcaatggcatgatcatggcgtACTGTAGTTTTGACtgccagggctcaagcaatcctcccacctcagcctcctgagtagctgggactgcaggcatacatcaccatgcccagggagtttttaaaattctttgctatgttgttcaggttggtcttgaactcctgggctcaaggggtccacctgccttggctcctcaaagtgctggaattacaggtgtgagccactgcgcctgacctgtatgccttcttttgagaaatgtccattcagatC-----------TAAATAATTGGattataagttttttttcttat
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19632029 502 -  19803153 I
e gorGor3.chr3                 122192641 503 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=2548.000000
s hg38.chr14_KI270722v1_random     61983 1 +    194050 a
s panTro4.chr3                 125151786 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19632531 1 -  19803153 a
i panPan1.JH650580             I 502 I 612
s gorGor3.chr3                 122193144 1 - 199944510 a
i gorGor3.chr3                 I 503 I 14325
s ponAbe2.chr3                 159792024 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225501607 1 - 229590362 a
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     23571 1 +     87690 a
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                188604 1 -    231459 a
i papAnu2.JH684932             C 0 C 0
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=416043.000000
s hg38.chr14_KI270722v1_random     61984 343 +    194050 gagttgtttgaactccttatatattctggttattaatcccttgtcagatatatagtttgcaaatattttcttccattctgtggattgtcttttcactttgtccattgttttctttactatgcagaaatttttgaacttcatgtgataccatttgttcatttttgctttggttgcctgagcttttggagtattactcaagaaatctgtgcccagaccaatttcctggagagtttccctaatgttttctttcagtagtttcgtgtccttgacttaag----tctttaacccatttggatttgatttttctatatagcacaagagagggttctagtttaattattctgcc
s panTro4.chr3                 125151787 343 - 202329955 gagttgtttgagctccttatatattctggttattaatcccttgtcagatatatagtttgaaaatattttcttccattctgtggattgtcttttcactttgcccattgttttctttactatgcagaaaactttgaacttgatgtgataccacttgttcatttttgctttggttgcctgagcttttggagtattactcaagaaatctgtgcccagaccaatttcctggtgagtttccctaatgttttctttcagcagtttcgtgtctttgatttaag----tctttaacccatttggatttgatttttgtatatagtgcaagagagggttctagtttaattattctgcc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159792025 343 - 202140232 gagttgtttgagctccttatatattctggttattaatcccttgtcagatatatagtttgcaaatattttattccattctgtggattgtcttttcactttgtccattgttttctttactatgcagaagcttttgaacttgatctgataccacttgttcatttttgctttggttgcctgagcttttggagtattactcaagaaatctgtgcccagactgatttcctggagagtttccctaatgttttatttcagtagtttcctgtctttgatttaag----tctttactccatttggatttgatttttgtatatatcacaagagagggttctagtttaattattctgcc
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225501608 339 - 229590362 gagttgtttgagctccttatatattctggttactaatcccttatcag--atatagtttgcaaatattttcttccattctgtgaattttcttttcacgtt-----ttgttttctttactatgcagaagcttttgaacttgatgtgataccacttgttcattattgctttggttgcctgaggttttggagtatgactcaagaaatccatgcccagaccaatttcctggagagttt-cctaatgttttctttcagtagactcatgtctttgatttaagtctttctttaatccatttggatttgatttttgtatacagggcgagagagggttctagtttaattattctgcC
i rheMac3.chr1                 C 0 I 46117
s macFas5.chr5_KE145639_random     23572 339 +     87690 gagttgtttgagctccttatatattctggttactaatcccttatcag--atatagtttgcaaatattttcttccattctgtgaattttcttttcacgtt-----ttgttttctttactatgcagaagcttttgaacttgatgtgataccacttgttcattattgctttggttgcctgaggttttggagtatgactcaagaaatccatgcccagaccaatttcctggagagttt-cctaatgttttctttcagtagactcatgtctttgatttaagtctttctttaatccatttggatttgatttttgtatacagggcgagagagggttctagtttaattattctgcc
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                188605 338 -    231459 gagttgtttgagctccttatatattctggttactaatcccttatcagatatatagtttgcaaatattttcttccattctgtggattttcttttcacgtt-----ttgttttctttactatgcagaagcttttgaaCTTGATGTGATACCACTTGTTCATTATTGCTTTGGTTGCCTGAGGTTTTGGAGTATGACTCAAGAAATCCATGCCCAGACCAatttcctggagagtttccctaatgttttctttcagtagacTCATGTCtttgatttaag----tctttaatccatttggatttgatttttgtatacagggCAAGAGAGGGTTCTAGTTTAATTATTCTGCC
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19632532 612 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=182772.000000
s hg38.chr14_KI270722v1_random     62327 288 +    194050 aattaaattattcagcctcagactttgggaggcccgggtggggagatcatgagggcaggagatcaagaccatcctggctaacacggtgaaactacgtctctactaaaaatacaaaaa-------------------aaaaaaaattagc-gggcatgatgg-gggcacctgcactcccagctacttgggaggccgaggaggagaatggtgtgaacccaggaggtggagcttgcagtgagcccagattgcaccactgcactccaacctgagcaacagagctagactccatctc----aaaaaataaaaaaatta-----
s panTro4.chr3                 125152130 270 - 202329955 aat-----------------gactttgggatgccgaggtgggtggatcatgagggcaggagatcgagaccatcctgactaacacggtgaaactccgtctctactaaaaatacaaaca-------------------aaaat---ttagccaggcatggtggcgggcgcctgtactcccagctacttgggaggctgaggaggagaatggtgtgaacccaggaggtggagcttgcagtgagcccagatcacgccactgcactccagcctgagcaacagagctagactccatctc----aaaaaaaaaaaaaaaaa-----
i panTro4.chr3                 C 0 I 4
s ponAbe2.chr3                 159792368 253 - 202140232 aat-----------------gactttgggaggccgaggcgtgcggatcatgaaggcaggagatcgagaccatcctagctaacatggtgaaactccatctctactaaaaatacaaaaa-------------------aaaa----ttagccaggcatggtggtaggtgcctgtagtcccagctacctgggaggctgaggaggagaatggcatgagcctgggaggtggagcttgccatgagcccagatcgtgccact----------------aacagagcgagactccatctc----aaaaaaaaaaaaaaaaa-----
i ponAbe2.chr3                 C 0 I 3
s macFas5.chr5_KE145639_random     23911 285 +     87690 gat-----------------gactttgggaggccgaggtgggcggatcatgagggcaggggatggagaccatcctggctaacatggtgaaactccgtctttactaaaaaaaaacacacacacacacac--------aaaa----ttagctgggtgtgctggcgggcgcctgtagtcccagctacttgggaggctgaggaggagaatggcttgaacccgagaggtggagcttgcagtgagcccagatggcgccactgcactccagcctgggcaacagagtgagactctgtctc----aaaaaaaaaaaaaaaaaaatta
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                188943 297 -    231459 aat-----------------gactttgggaggctgaggtgggcggatcatgagggcaggggatcgagaccatcctagctaacatggtgaaactccgtctttactaaacacacacacacacacacacacacacacagaaaa----ttagctgggtgtgctggcgggcgcctgtagtcccagctacttgggaggctgaggaggagaatggcttgaacccgagaggtggagcttgcagtgagcccagatggcgccactgcactccagcctgggcaacagagtgagactccgtctcaaataaaaaaaaaaaaaaaaagatta
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19632532 612 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=2125.000000
s hg38.chr14_KI270722v1_random     62615 2 +    194050 tt
s panTro4.chr3                 125152404 2 - 202329955 tt
i panTro4.chr3                 I 4 C 0
s panPan1.JH650580              19633144 1 -  19803153 -t
i panPan1.JH650580             I 612 I 833
s ponAbe2.chr3                 159792624 2 - 202140232 tt
i ponAbe2.chr3                 I 3 C 0
s macFas5.chr5_KE145639_random     24196 2 +     87690 tt
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                189240 2 -    231459 tt
i papAnu2.JH684932             C 0 C 0
e gorGor3.chr3                 122193145 14325 - 199944510 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=676103.000000
s hg38.chr14_KI270722v1_random     62617 828 +    194050  
s panTro4.chr3                 125152406 833 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159792626 831 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     24198 849 +     87690  
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                189242 846 -    231459  
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19633145 833 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=15555.000000
s hg38.chr14_KI270722v1_random     63445 11 +    194050 gttgagtaaca
s panTro4.chr3                 125153239 11 - 202329955 gttgagtaaca
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19633978 11 -  19803153 gttgagtaaca
i panPan1.JH650580             I 833 I 1269
s ponAbe2.chr3                 159793457 11 - 202140232 gttgagtaaca
i ponAbe2.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     25047 11 +     87690 gttgagtaaca
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                190088 11 -    231459 gttgagtaaca
i papAnu2.JH684932             C 0 C 0
e gorGor3.chr3                 122193145 14325 - 199944510 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=269664.000000
s hg38.chr14_KI270722v1_random     63456 335 +    194050 gtgttggaagtggacattcttgccttgttccagatct--------tagaagaaaggctttcagtttttctctgttccggatgatactggctgttggtctgttgcatatggtttttattgtgttgtggtatgttccttctaaatctagttttttttttagggtttctttttatcacagggatgttggattttattaaatcgttttcagcatcagttgaaattaccatatggtttctgtccttcattctgttgatatgatgtgtcacattgattgatttacatatgttgaacca--tgttggcattcttggggtaaatcccacttagacatgatgaatggtcttttt
s panTro4.chr3                 125153250 334 - 202329955 gtgttggaagtggacattcttgtcttgttccagatct--------tagaagaaaggctttcagcttttccctgttcaggatgatactggctgtgggtctgttgcatatggtttttattgtgttgtggtatgttccttctatatctagttttttttg-agggtttctttttatcacagggatgttggattttattaaatgcttttcagcaccaattgaaattatcatatggtttttgtccttcattctgttgatatggtgtgtcacattgattgatttgcatatgttgaacca--tgttggcatcctcgggataaatcccacttagacatgatgaatggtcttttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159793468 334 - 202140232 gtgttggaagcggacattcttgtcttgttccagatct--------tagaagaatcgctttcagtttttccctgttcaggatgatactggctgtgggtctgttgtatatggtttttattgtgttgtggcatgttccttctatatctagttttttttg-agggtttctttttatcatagggatgttggattttattaaatgcttttcagcatcggttgaaattatcatatggtttttgtccttcattctgttgatatgatgtgtcacaatgattgatttacatatgttgaacca--tgctggcatacttgggataaatcccacttagacatgatgaatagtcttttt
i ponAbe2.chr3                 C 0 I 1473
s macFas5.chr5_KE145639_random     25058 342 +     87690 gtgttggaagtggacattcttgtcttgttccagatcttcctcttccagaaggaaggctttcagtttttccctgttcgggatgatactggctgtgggtctgctgcatatggtttttattgtgctgtggtatgttccttctatgtctagttttttta--agggtttctttttatcatagggatgttggattttattaaaagc-tttcagcatcaattgaaattatcatacggtttttgtccttcattctgttgatgtgatgtgtcacactgattgattgacatgtgttgaaccatttgctgccatccttgggataaatcccacttagacatgatgaatggtcttttt
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                190099 334 -    231459 gtgttggaagtggacattcttatcttgttccagatct--------cagaaggaaggctttcagtttttccctgttcgggatgatactggctgtgggtctgCTGCATATggtttttattgtgctgtggtatgttccttctatgtcTAGtttttttA--AGGGTTTCTTTTTATCatagggatgttggattttattaaaagc-tttcagcatcaattgaaaacatcatatggtttttgtccttcattctgttgatgtgatgtatcacactgattgattgaCATGTGTTGAACCATTTGCTGCCAtccttgggataaatcccacttagaCATGATGAATGGTCTTTTT
i papAnu2.JH684932             C 0 C 0
e panPan1.JH650580              19633989 1269 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=54342.000000
s hg38.chr14_KI270722v1_random     63791 119 +    194050 ---------------------------------------------------------------------------------------------------------------catagaatgagtatggtaatactacagtcttctttgttttttggaatagtttgagtaggattgatagtaattcttccttcaatgtttggtaaaattaatcagtgaagcca---------ttggatcca
s panTro4.chr3                 125153584 128 - 202329955 ---------------------------------------------------------------------------------------------------------------cataggatgagtttggaaatactacagccttctctgttttttggaatagtttgagtaggattgatagtaattctgccttcaatgtttggtgaaattaatcagtgaagccagtgaagccattggatcca
i panTro4.chr3                 C 0 C 0
s macFas5.chr5_KE145639_random     25400 230 +     87690 agcgtgttgttgaatttggtttttgctagtattggggatttctggatcaatgtttatcagtgatattgacctgtagtttctttggttttagtttcagggtaatagtagcctcacagaatgagtttggaaacacaacagccttctctgttttctggaatagtttgagtaggattgatagtaattcttccttagatgtttggtaaaattaatcagtgaagcca---------ctggatccA
i macFas5.chr5_KE145639_random C 0 I 41825
s papAnu2.JH684932                190433 230 -    231459 AACgtgttgttgaatttgttttttgctaGTATTGGAGATTTCTGGATCAATGTTTATCAgtgatattgacctgtagtttctTTGGTTTTAGTTTCAGGGTAATagtagcctcatagaatgagtttggaaatacaacagtcttctctgttttctggaatagtttgagtaggattgatagTAATTCTTCCTTAGATGTTTGGTAAAATTAATCAGTGAAGCCA---------CTGGATCCA
i papAnu2.JH684932             C 0 C 0
e ponAbe2.chr3                 159793802 1473 - 202140232 I
e panPan1.JH650580              19633989 1269 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=329.000000
s hg38.chr14_KI270722v1_random     63910 2 +    194050 ga
s panTro4.chr3                 125153712 2 - 202329955 gg
i panTro4.chr3                 C 0 C 0
s papAnu2.JH684932                190663 2 -    231459 ga
i papAnu2.JH684932             C 0 I 33287
e ponAbe2.chr3                 159793802 1473 - 202140232 I
e panPan1.JH650580              19633989 1269 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=32850.000000
s hg38.chr14_KI270722v1_random     63912 448 +    194050 cttttctttgctaggagatgttttattatgggttcaatctcatttatccatttcttctaggtttgttttttagttgtttttgtttttttgtgggtttttttttgttttttgtttgtttgtttgttttttgagatggagtcttgcactgtcacccaggctggagcttggtacaatgtcagctcactgcaacttctgcctcccaggttcaaatgattctcctgcctcagcctctggagtagctgggagtacaggtgcacaccaccatgcctggctaacttttgtatttttagtagagatggggtttcaccttgttggccagcctggtcttgaactcctgacctcaggtgatcacctaccttggcctcccaaagtgttgggattacaggcatgagccatggtgcctggtcattatttgcaggtttatcaatttattggaatatagttggtc
s panTro4.chr3                 125153714 417 - 202329955 cttttctttgctaggagatgttttattatggcttcaatttcatttatccatttcttctaggtttgttgtttggttgtttct-------------------------------ttgttttctttttttttgagatggagtcttgctctgtcacccaggctggagcgtggtacaatctcaggtcactgcaacctctgcctctcaggttcaagtgattttcctgcctcagcctctggagtagctgggagtactggtgcatgccaccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctaacctcaggtgatcacctgccttggcctcccaaagtgttgggattacaggcatgagccacggtgcctggccatttcttccaagtttttcaatttattggaatatagtcagtc
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159793802 1473 - 202140232 I
e panPan1.JH650580              19633989 1269 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.JH684932                190665 33287 -    231459 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=58020.000000
s hg38.chr14_KI270722v1_random     64360 231 +    194050 ataatagtttctaatgattctttgaatttccgcagtatcagttggagtgtctcctttttaatctctggttttatgtatttgagtcttctctcttttttcttagtctggctaaatgtttgttgattttgttggtctttaaaaaaa-attaacttttcatttcattgacattttatatttttaaatttcaatttaatttatttctgctctgatccttactatgtttccttctgc
s panTro4.chr3                 125154131 232 - 202329955 ataatagtttccaatgattctttgaatttccacagtatcagttgtagtatctcctttttaatctctggttttatgtatttgagtcttctctcttttttcttagtctggttaaatgtttgttgattttgttggtcttttaaaaaatattaacttttcatttcattgatattttatatttttaaatttaaatttcatttacttctgctctgatctttgctgtgtttccttctac
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159795275 231 - 202140232 ataatagtttctaatgattctttgaatttccgcagtatcagttgtagtgtttcctttttaatctctggttttatgtatttgagtcttcactcttttttcttagtctggctaaacatttgttgattttgttggtcttttaaaaat-attaacttttcatttcattgatattttatatttttaaatttcaatttcatttatttctgctctgatctttactatgtttccttctgc
i ponAbe2.chr3                 I 1473 C 0
e panPan1.JH650580              19633989 1269 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.JH684932                190665 33287 -    231459 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=64334.000000
s hg38.chr14_KI270722v1_random     64591 154 +    194050 taattttggttttggtttgctcttgcttttctaattatttaagatgcattattaggttgtttatctgaagtttttctac-tttttttgatggaggtgctttttgctataaacttacttcttagtactgt--------ttttactgtatcccataggtttg--ttt
s panTro4.chr3                 125154363 161 - 202329955 taattttggttttggtttgctcttgcttttctaattatttaagatgcattattaggttgtttatttgaaatttt-ctac-tttttttgatgtaggtgctttttgctataaatttacctcttagtactgtagtagtgtttttactgtatcccataggtttt--ttg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159795506 154 - 202140232 taattttggtttcggtttgctcttgcttttctaattatttaagatgcattattaggtttttt-tttgaagtttttctacttttttttgatgtagatgttttttgctgtaaagtttccccttagtactgt--------ttttactgtatcccataggtttt--ttt
i ponAbe2.chr3                 C 0 C 0
s calJac3.chr7                 120459182 151 - 155834243 taattttggatttggtttgct----cttttctaattatttaagatgcattattagtttgttcatttgaagtttttctac-tttttttgatgtaggtgttttttgctataaacttatctcttagtactgc--------ttttgct-tatcccataggttttggttt
i calJac3.chr7                 N 0 I 16
e panPan1.JH650580              19633989 1269 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.JH684932                190665 33287 -    231459 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=-2023.000000
s hg38.chr14_KI270722v1_random     64745 11 +    194050 --tttgttttttg
s panTro4.chr3                 125154524 11 - 202329955 --tttttgttttt
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19635258 10 -  19803153 --tttgtttttg-
i panPan1.JH650580             I 1269 I 2659
s ponAbe2.chr3                 159795660  3 - 202140232 --------ttt--
i ponAbe2.chr3                 C 0 C 0
s calJac3.chr7                 120459349 11 - 155834243 tttttcttttc--
i calJac3.chr7                 I 16 C 0
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.JH684932                190665 33287 -    231459 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=43588.000000
s hg38.chr14_KI270722v1_random     64756 117 +    194050 ttttttgtattttttttttaagagagagtctcgct-ctgttgcccaggctggagtgcagtggtgcaatcttggctcactacaagctctgccttctaggttcacgccattctcccgcct
s panTro4.chr3                 125154535 115 - 202329955 gtttttgt--ttttgttttgagacggagtctcgct-ctgttgcccaggctggagtgcagtgacgtgatctcggctcactgcaagctccgcctcccgggttcacgccgttctcccgcct
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159795663 105 - 202140232 ------------ttcttttgagacggagccttgct-ctgtcacccaggctggagtgcagtggcaggatctcagctcactgcaagctccgcctcccaggttcacgccattctcccacct
i ponAbe2.chr3                 C 0 C 0
s calJac3.chr7                 120459360 118 - 155834243 ttttcttttttttttttttgagacagagtttcgctgctgttacccagactggagtgcaatggcatgatcttggctcaccacaacctccaccttctgggttcaagcaattctcctgcct
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.JH684932                190665 33287 -    231459 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27487782 619 -  28733288 I

a score=205191.000000
s hg38.chr14_KI270722v1_random     64873 295 +    194050 cagcctcccgagtagctgggactacaggtgcccacgaccatgtccggctaatttttgttttttgtatttttagtagagacggagtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccactgcacccggccTGTATCCTATAGGTTTTgttttgactttaaagtttttcttttctcaaaaactcaatgccatggtaccggcttctagtgcttttggcagtgagcccc---ttttacttga
s panTro4.chr3                 125154650 295 - 202329955 cagcctcccgagtagctgggactacaggcgcccgccatcactcccggctaacttttgttttttgtatttttagtagagatggggtttcactgtgttagccaggatggtctcgatctcctgacctcgcgatccgcccgcctcggtctcccaaagtgctgggattacaggcatgagccactgtgcccggccTGTACCCCATAGGTTTTGGTTTGACTTTaaactttttcttttctcgaaaactcagtgtcatggtaccggcttctagtgctttgggcagtgagaccc---ttttacttga
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159795768 281 - 202140232 tagactcccgagtagctgggactacagacgcccaccaccacgcccggctaatttttgttttttgtatttttagtagagatggggtttcatcgcgttagccaggatggtctcgatctcctgaccttgtgatccacccacctcggcctcccaaagttctgggattacaggcatgagccactgcacccggccTGTATCCCATAGATTTTggtttgactttaaagtttttcttttctcaaaaactcagtgtcacgttaccagcttctagtgctttgggc-----------------aCTTGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27488401 295 -  28733288 cagactcccgagtagctgggactacaggcgcctgccaccacactcagctaatttttgttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcatgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccTGTATCCCATAGGTTTTggtttgactttaaagtttttcttttctcaaaaactcagtgtcatggtaccggcttctagtgctttgggcagtgagaccc---ttttacttga
i nomLeu3.chr24                I 619 C 0
s calJac3.chr7                 120459478 260 - 155834243 cagcctcccgagtagctgggactacaggcacgcaccactatgcccagctaa-------tttttgtatttttagtagagaccgggtttcaccttgttgaccaggatggtctcgatctcttaacctcgtgatccacccgccttggcctcccaaagtgctgggattataggtgtgagccaccgcgcccagcc-----------------------------aagtttttcttttctcaaaaactc--tgtcatagtattggctttgagtgccttgggcagtgagccccgctttttagttgg
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.JH684932                190665 33287 -    231459 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=426955.000000
s hg38.chr14_KI270722v1_random     65168 441 +    194050 taacaGTGGtagctgggaaaacttggcaatgtaaataaatacacggcatctagattggaaaggaagaagtacagttatctttatgtacggatgacgtgatcttgcatttagaaaatcataagaaatttactaaaaagtattaggactcatgaacaaatttaggaatgtaatactatataagattggtatagaaaaat-aactgtatttctttac-caagaaatcttgaatccaaaaatggaatttcaaacat-aaatcttgttacaatagaattaaa--------actgggg--taaatttaacataagaagcttaaacttgaacactaaaaactacaatacatggttAGTGTTGGAAACACCCAGGTACCATCCTTGAGCCTTCTCTCCTTGGCTCTGAGGACTTTACCTTCACGGGGTGAGGAAAGGTGTTGCATTCTTGACTTTTACATTA
s panTro4.chr3                 125154945 426 - 202329955 taacaGTGGtagctgggacaacttggcaacgtaaataaataaacggcatccagattggaaaggaagaagtacagttatctttatgtacagatgacatgatcttgcatttagaaaatcgtaagaaatttactaaaaagtattaggactcatgaacaaatttaagaatgtaacactatataagattggtatacaaaaat-aactgtatttctttac-caagaaatcaagaatccaaaaatggaattacaaaaat-aaatcttgttacaatagaattaaa--------GCTGGGG-----------------AAGCTTAAACTTGAACACTAAAAACTGCAATACATGGTTAGCGTTGGAGACACCCAGGTACCATCCCTGAGCCTTCTCTCCTTGGCTCTGAGGACTTTACCTTCACGGGGTGAGGAAAGGGGTTGCAGTCTTGGCTTTTACATTA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159796049 425 - 202140232 TAACAGTGAtagctgggacaacttggcaacgtaaataaataaacggcatctagactggaaaggaagaagtacagttatctttatgtacagatgacatgatcttgtacttagaaaat-ataagaaatttactaaaaagtattaggactcatgaacaaatttaggaatgtaacactatacaagattggtatacaaaaat-aattgtatttctttac-caagcaatcaagaatccaaaaatggaattataaaaat-aaatcttgttacaatagaattaaa--------gctgggg-----------------aagcttaaacttgaacactaaaaactacaatacaCGGTTAGTGTTGGAAACACCCGGGTACCATCCCTGAGCCTTCTCTCCTTGGCTCTGAGGACTTTACCTTCACGGGGTGAGGACAGGGGTTGCATTTTTGGCTTTTACATTA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27488696 440 -  28733288 taacCGTGGtagctgggacaacttggcaacgtaaataaataaacggcatctagattggaaaggaagaagtacagttatctttatgtacagatgacatgatcttgcatttagaaaatcataagaaatttactaaaaagtattaggactcatgaacaaatttaggaatgtaacactatacaagattggtata-aaaaat-aattgtatttctttag-caagaaatcaagaatccaaaaatggaattacaaaaat-aaatcttgttacaataaaattaaa--------gctgggg--taactttaacataagaagCTTAAACTTGAACACTAAAAACTACAATATGTGGTTAGTGTTGGAAACACCCAGGTACCTTCCCTGAGCCTTCTCTCCTTGGCTCTGAGGACTTTACCTTCATGGGATGAGGAGAGGGGTTGTATTTTTGGCTTTTACCTTA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401031 449 - 125196307 TGACGGTCCTAACTAGGGCAATTTggcaacagaaataaataaaaggtgtcTAGATTGGAGAGGAGGAAGTTCAACTAGCTTTATTCTCAGGGGACATGATCCtgtatttaaaaaactgtaaggAATTCACTAAAAACTATtataactaataaatgagttcaggtATATAATGGGATACAAGA-TGATGTACAAAAATCCATTGTATTTCTGTATACAAGAAATGAAcaatc--aaaatgaaattaaggaacA-AATTCTAGTTATAatagaaccaaaaacaaaatacttaggaatatctTTAAGAAAAGAGATATAAACTTGAACACTAGAAACTACAGTACATGACTACTGTTGGCAACACCTAGGCATTATGCCT-AGTCTCCCCTCCTTGACTCTAAGGATTTTCCCTTCATAGGGGTAAGAGGGGGATTGTATTGTTGGCCTTTATATTA
i papAnu2.chr9                 n 33287 C 0
s calJac3.chr7                 120459738 423 - 155834243 ------------------caacTTGACAATGTaaataaataaatgacatctagattgaaaaggaagaagtacagttatctttatgtacggataacaggatcttgcatttagaaaatcatacactatt-actaaaaagtattaggactcatgaacaaatctaggaatgtaacactctacaagattgacattcaaaaatcaattgtatttctttac-caagaaatcaagaatccaaaaatggaatttcaaaaataaaatcctgttacaatggaatcaaa--------gctggga--taactttaacaaaagaaacttaaacttgaacactaaaaactacagtacatggttaaTGTTGGAAACACCCAGGTATCATCCCTGAGCTTTCTCTCCTTGGCTCTGAGGACTTTA-CTCCATAGGGTAAGGAGAGGGATTGCATTCTTGGCTTTTATATTA
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1179.000000
s hg38.chr14_KI270722v1_random     65609 1 +    194050 T
s panTro4.chr3                 125155371 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159796474 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489136 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401480 1 - 125196307 T
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120460161 1 - 155834243 T
i calJac3.chr7                 C 0 C 0
s saiBol1.JH378110               2991885 1 +  49021937 C
i saiBol1.JH378110             N 0 I 1709
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=426615.000000
s hg38.chr14_KI270722v1_random     65610 404 +    194050 ATTAGGTGGGTTCGGGGTGAGGTATCTGCA-AGCCAAATGAGTATTACAATCTCTACTTTTATGTATAAGAGACTGCGGCCCACAAAGAGAGGGAATGACAATCCATATCCTGGAAGGCGAATTGTCAGACACTGATTTCCCCTATGTAAACCCTGCCAATCATCTTGTATTTAAAGGATCCCCAGATACCTTACCAATAGGTGTTCAAGAGAGAGGCCGGTAAATCTAGGCGTCTGAGA---CAAGGCTAAAGATTCCAATATTGGAGACAACAGGGCTCTGGGAAGATTAAGGTTGAGTTTTCTGGATCTGCAGAATAGAGTCACTGAGGACCAATTGCAAGATCAGAGGAGAT---GAAA---GAACAAGTCAGAGCATG-CTTAGGAAAAGAGAAAACCAGGGATAGGTTT
s panTro4.chr3                 125155372 406 - 202329955 ATTAGGTGGGTTCGAGTTGAGGTATCTGCA-ATTCAAATGAgtattacaatctctacttttatggataagagactgaggcccacgaagagagggaatgacAGTCCATATCCTGGAAGGCAAATTGTCAGGCACTGATTTCCGCTATGTAACCCCTGCCAATCATCGTGTATTTAAAGGATCCCCAGATACCATACCAATAGGTGTTCAAGAGAGAGGCCTGTAA-TCTAGGCGTCTGAGAAAGCAAGGCTAGAGATTCCGATATTGGAGACAACAGGGCTCTGGGAAGATTAAGGTTGAGTTTTCTGGATCTGCAGAATAGAGTCACTGAGGAGCAATTCCAAGATCAGAGGAGAT---GAAA---GAACAAGTCAGGGCATG-CTTAGGAAAAGAGAAAACCAAGGATAGGTTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159796475 406 - 202140232 ATTAGGTGGGTTTGGGGTGAGGTATCTGCA-ATTCAAATGAGTATTACAATCTCTACTTTTATGGATAAGAGACTGAGGCCCACAAAGAGAGGGAATGACAGTCCACATCCTGGAAGGCGAATTGTCAGGCACTGATTTCCCCTATGTAACCCCTGCCAATCATCACGTATTTAAAAGATCCCCAGATACCATACCAATAGGTGTTCAAGAGAGAGGCCTGTAA-TCCAGGCGTCCGAGAAAGCAAGGCTAGAGATTCCAATATTGGAGACAACACGGCTCTGGGAAGATTAAGGTTGAGTTTTCTGGATCTGCAGAATAGAGTCACTGAGGAGCAATCGCAAGATCAGAGAAGAT---GAAA---GAACAAGTCAGGGCATG-CTTAGGAAAAGAGAAAACCAGGGATAGGTTT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489137 406 -  28733288 ATTAGGTGGGTTCGGGGTGAGGTATCTGCA-ATTCAAATGAgtattacaatctctacttttatggaaaagagactgaggcccagaaagAGACCGAATGATAGTCCATATCCTGGAAGGCGAATTGTCAGGCACTGATTTCCGCTATGTAACCCCTGCCAATCATCGTGTATTTAAAGGATCCCCAGATACCATACCAATAGGTGTTCAAGAGAGAGGCCTGTAA-TCTAGGCGTCTGAGAAAGCAAGGCTAGAGGTTGCAATATTGGAGACAACAGGGCTCTGGGAAGATTAAGGCTGAGTTTTCTGGATCTGCAGAGTAGAGTCACTGAGGAGCAATTGCAAGATCAGAGAAGAT---GGAA---GAATAAGTCAGGGCACG-CTTAGGAAAAGAGAAAACCAGGGATAGATTT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401481 406 - 125196307 TACAGTTGGGCTTGGGGTGAGGTCTGCACA-A-CCAAATGTGTAttactgtttccatttttatggaTGGAAGACTGAGGCCCACAAAGAGAAAG-ATGACCATCCATATCCTGGATGGTAGACTATCAGGCACGGGTTCCCCTCACCAAACCCCTGCCAATCATCCTGTATTTAAAGGATCCCCAGATATCATACCAATAGGTGTTTAAGAGAGAGGCCTGGGA-TCCAGGAGTCTGAGAAA-CGAACACAGAAATTCCAAAACCTGAGGCAACAGGGTTCTAGGAGGATCAAGACTGAGTTGCATAGATCTGCACAAT--AGTCACTAAGG--CAATTATAGGATCAGAGAAGATACAGAAATTTGAACAAAGCAGGACATAtcttaggaaaagagaaaatcaggGATAGGTTT
i papAnu2.chr9                 C 0 I 10
s calJac3.chr7                 120460162 404 - 155834243 ATTAGGTGGGTTCGGGGTGAGGTGTCTGCACATTCAAATGAGCATCACAATCTCTACTTTTATGGATAAGAGACTGAGGCCCACAAAGATGGGGAATGACAATCCATATCCTAGAAGGTGAAATATCAGGCACTGATTTCCCCTATGTAACCCCTGCCAATCACC-TGTATTTGGAGGATCCCCAGATACCATACAAATAGGTGTTCAAGAGAGAGGCCTGTAA-TCTAGGC-TCTGAGAAAGGAAGGCTGGAGATTCCAATACTGGAGGCAGCAGGGCTCTGGGAAGATTAAAGTTGAGTTTTGTGGATCTGCAGAATAGGGTCACTGAAGAGCAATTGCGAGATCAGAGACAAT---GGG----GGACAAGGCAGGGGATA-CTTGGTAAAAGAGAAAACCAAGAACAGGTTT
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=17190.000000
s hg38.chr14_KI270722v1_random     66014 18 +    194050 TAGGCAAGAGTCACACTG
s panTro4.chr3                 125155778 18 - 202329955 TAGGCAAGAGTCACACTG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159796881 18 - 202140232 TAGGCAAGAGTCACACTG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489543 18 -  28733288 TAGGCAAGAGTCACACTG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120460566 18 - 155834243 TAGGCAAGAGTCACACTG
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3401887 10 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=107725.000000
s hg38.chr14_KI270722v1_random     66032 168 +    194050 AGGAAGTGCAggttcttggcgttgctcaggatg--aaatccaaaagcaagcctgtggtggaa----------------gaaagcagctctatggaggcattggc-ggtg-ttacagccctgcgtcccctccgg----cagggcagggagccc------------------------tccgtgggttgtgctcccagagtagcagcctaggggtggc
s panTro4.chr3                 125155796 168 - 202329955 AGGAAgggcaggttcttggcgtcgctcaggaag--gaatccaaaagcaagcctgtggtggaa----------------gaaagcagctctacggaggcactggc-ggtg-ttacagccctgcgtccactcctg----cagggcagggagccc------------------------tccgtgggttgtgctcccagagtagcagcctgggggtggc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159796899 167 - 202140232 AGGAAgggcaggttcttggcctcgctcaggaag--gaattcaaaagcaagcctctggtggaa----------------gaaagtagctctacggaggcactggc-ggtg-taacagccctgcgtctgctcctg----cagggcagggagccc------------------------tccgtgggttgttctcccagagtagcagcct-ggggtggc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489561 170 -  28733288 AGGAAgggcaggttcttggtgtcgctgaggaagatgaattcaaaagcaagcctgtggtggaa----------------gaaagcagctccatggaggcattggc-gctg-ttacagccctgcgtccgctcctg----cagggcagggagccc------------------------tccgtgggttgtgctcccagagtagcagcctagggctggc
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120460584 160 - 155834243 ATGAAgggcaggttcttggtgttgctcaggaag--gaattcaaaggcaagcctgcggcggaa----------------gaacgtggctctac-gaggcattggc-agtg-tggcagctttctg------actg----cagagccgggagcac------------------------tgcacaggttgtactaccagggcagcagccc-agggtggt
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                860401 209 -   1077187 gggaagcagaggtgggtgg-attgccctagactcacaggctcaagaccagcatgagccagagcgagaccctcatctGTaaaaatagc----cagaggttgtggctggtgcctgtagtcc--cggctactcaggagactgaggcaagaaaaccacataggcccaagagtttgaagttgctgtgagctatgatgccacagtactccactgagagtgac
i otoGar3.GL873804             N 0 N 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3401887  10 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=183049.000000
s hg38.chr14_KI270722v1_random     66200 235 +    194050 ttgtagtcatttctataattcacttttaatggcatgctaattaaggggcgggttactcagaaacagctag-aaatgaacagtaacttccagctgtttccatggcaaggggtggggacttcccgtgctgccatggcattggcaaactgtcatggcgctggtgggagcatcttctggtgatctaaggcgtgaggtgctttcgctgcctctcccagtttcCTGAGTGCCTCTTACCTGA
s panTro4.chr3                 125155964 235 - 202329955 ttgcagtcatttttataattcacttttaatggcatgctaattaaggggcgggttattcagaaatagctag-aaatgggcagtaacttccagctgtttccatggcaaggggtggggacttcccgtgctgccgtggcattggcaaactgtcacggcgctggtgggagcgtcttctggtgaTCTGAGGCGTGAGGTGCTTTCGCTGCCTCTCCCAGTCTCCTGCGTGCCTCTTACCTGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797066 235 - 202140232 ttgcagtcatttttataattcacttttagtagcatgctaattaaagggcgggttattcagaaatagctag-aaatgggcagtaacttccagctgttcccatggcaaggggtggggacttcccgtgctgccatggcgttggcaaactgtcacggcgctggtgggagcatcttctggtgatctgaggcgtgaggtgctttcgctgcctctcccagtttcCTACGTGCCTCTTACCTGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489731 235 -  28733288 ttgcagtcatttttataattcacttttaatggcatgctaattaaggggagggttattcagaaatagctag-aaatgggcactaacttccagctgtttccatggcaaggtgtggggacttcctgtgctgccatggcgttggcaaactgtcacggcgctggtggcagcatcttctcgtgatctgaggcatgaggtgctttcgctgcctctcccggtttcCTGCGTGCCTCTTACCTGA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120460744 222 - 155834243 ttgtag-------------tcacttttaattgcatgctaattaaggggcgggttattcagaaatagctagaaaatgggcagtaactcccaggtgtttccatggcaaggggcagtgattttccatgctgcccaggcactggcaaactgtcac-gcactggtgggaacatcttctggTGGTCTGTGGCCTGAGGTGCTTTCACTGCGTTTCCCAGTTTCCTGTGTGCCTCTTACCTTA
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3401887  10 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=34847.000000
s hg38.chr14_KI270722v1_random     66435 33 +    194050 AACCCCTTCACACCCCCATCTACCCACCTACAA
s panTro4.chr3                 125156199 33 - 202329955 AAGCCCTTCACACCACCATCTGCCCACCTACAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797301 33 - 202140232 AAGCCCTTCACATCCCCATCTGCCCACCTACAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489966 33 -  28733288 AAGCCCTTCACACCCCCATCTGCCCACCTACAA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401897 33 - 125196307 AAGCCTCTCATCCCTCCATGGCTCCACCCCCAA
i papAnu2.chr9                 I 10 C 0
s calJac3.chr7                 120460966 33 - 155834243 AAGCCCTTCACACCCCCATCTGCCCACCCACAA
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1911.000000
s hg38.chr14_KI270722v1_random     66468 1 +    194050 A
s panTro4.chr3                 125156232 1 - 202329955 A
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797334 1 - 202140232 A
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27489999 1 -  28733288 A
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401930 1 - 125196307 A
i papAnu2.chr9                 C 0 I 1
s rhiRox1.KN299240v1             1529576 1 +   1849528 A
i rhiRox1.KN299240v1           N 0 I 33
s calJac3.chr7                 120460999 1 - 155834243 A
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=33560.000000
s hg38.chr14_KI270722v1_random     66469 32 +    194050 CTTCACTGCCCTTTCACCCCACCCCCGTTTCA
s panTro4.chr3                 125156233 32 - 202329955 CTTCACTGCCCTTTCACCCCACCCCCGTTTCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797335 32 - 202140232 CTTCACTGCCCTTTCACCCCACCCCCATTTCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27490000 32 -  28733288 CTTCACTGCCCTTTCACCCCACCCCCGTTTCA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401932 32 - 125196307 CTTCACCTCCATTTCATCCCAACCTCTTTCCA
i papAnu2.chr9                 I 1 I 1
s calJac3.chr7                 120461000 31 - 155834243 TGTCACTGCCC-TTCATCCTACCCCCGTTTCA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1529577 33 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=10970.000000
s hg38.chr14_KI270722v1_random     66501 15 +    194050 CATGCACTCCTACAT
s panTro4.chr3                 125156265 15 - 202329955 CACGCACTCCCACAT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797367 15 - 202140232 CACGCACCCCCACAT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27490032 15 -  28733288 CACGCACTCCCACAT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401965 15 - 125196307 CCCTCAACCCCATAG
i papAnu2.chr9                 I 1 C 0
s rhiRox1.KN299240v1             1529610  9 +   1849528 CCCTCACCC------
i rhiRox1.KN299240v1           I 33 I 9
s calJac3.chr7                 120461031 15 - 155834243 CAAGAACTCCCACAT
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=7733.000000
s hg38.chr14_KI270722v1_random     66516 8 +    194050 CAACCTGG
s panTro4.chr3                 125156280 8 - 202329955 CAACCCTG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797382 8 - 202140232 CAACCCTG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27490047 8 -  28733288 CAATCCTG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401980 8 - 125196307 CAACCTTC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120461046 8 - 155834243 CAACCCTG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1529619 9 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1911.000000
s hg38.chr14_KI270722v1_random     66524 1 +    194050 A
s panTro4.chr3                 125156288 1 - 202329955 A
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797390 1 - 202140232 A
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27490055 1 -  28733288 A
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401988 1 - 125196307 A
i papAnu2.chr9                 C 0 C 0
s rhiRox1.KN299240v1             1529628 1 +   1849528 A
i rhiRox1.KN299240v1           I 9 I 697
s calJac3.chr7                 120461054 1 - 155834243 A
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=203729.000000
s hg38.chr14_KI270722v1_random     66525 225 +    194050 GCATCCAAGCCAGCAATTTCCCTGTT-----AGGAACCTCGGTGATAGCCGGAGCTCTGAGAAACCCCTA-GGCAGAACTCCTTGCCTAGTTTGTGGCAGACATCAGGGAAGGAAAGGCAAAGTTCTAGTCTTTCTCAC------------AATAAATAAATAAAGATAGGTAGATTTGATTGTTTGT----TGGA-----------TGGATGAAACGTGGGAGTTTATGGGCAAATATTTATCAGACACTGGAAGTG
s panTro4.chr3                 125156289 224 - 202329955 GCATTCAAGCCTGCG-TTTCCCTGTT-----AGGAACCTCGGTGGTAGCCGGAGCTCTGAGAAACCCCTA-GGCAGAAATCCTTGCCTAGTTTGTGGCAGAAATCAGGGAAGGAAAGGCAAAGTTCAGGTCTTTCTCAC------------AATAAATAAACAAAGATAGCTAGATTTGATTGATTGG----TGGA-----------TGGATGAAACGTGGGAGTTTATGGGCAAATATTTATCAGACACTGGAAGTG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797391 228 - 202140232 GCATTCAAGCCGGCG-TTTCCCGGTT-----AGGAACCTCGGTGGTAGCCGGAGCTCTGAGAAACCCCTA-GGCAGAACTCCTTGCCTAGTTTGTGGCAGAAATCAGGGAACGAAAGGCAAAGTTCAGGTCTTTCTCAC------------AATAAATAAATAAAGATAGGTAGATTTGATTGATTGGTGGATGGA-----------TGGATGAAATGTGGGAGTTGATGGGCAAATATTTATCAGACACTGGAAGTG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27490056 221 -  28733288 GCATTCAAGCAGTCG-TTTCCCTGTT-----AGGAACCTCGGTAGTAGCTGGAGCTCTGAGAAACCCCTAGGGCAGAACTTCTTGAGTAGTTTGTGGCAGAAATCAGGGACAGAAAGGCAAAGTTCTGGTCTTTCTCAC------------AATAAATAAATAAAGATAGGTAGATTTGATTGA--------TGGA-----------TGGATGAAACGTGGGAGTTTATGGGAAAATATTTATCAGACACTGGAAGTG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3401989 252 - 125196307 TTACATAAGCCCACA-TCTACCTGCTTGAAGAGGAATTTTGATGGTAGCTGGAGCTCTGAGGAA-GCCTA-CACAGAACTCCATGCCTCGTAGGTGGCAAAAGCCA-GGACAGAAAGGCAAAGTTCGAGTCCatcttacaaaataataaaaaacaaataaaataaaataag--gattggatggatggatggatggatggatggaacttggatggaacttgggaGATTCTTGGTAAATAATTATCAGACTCTGGAAGAG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120461055 216 - 155834243 GCATTCAAGCCAGCT-CTTCTCTGTT-----AGGAACCTCGGTGGTAGCCGGAGCTCCGAGGAACCCCTG-TGCAGAATGCCTTGCTTAGTTTGTGACAGAAAGCAGGGACAGGAAGGCAAAGTTCAGGTCTTTCTCAC--------AATAAATAAATAAATAAAGATGGGTAGAC----------------TGGA-----------TTGATGAAATGTGGGAATTTATGGGCAAATATTTATCAGACACTGGAAGTG
i calJac3.chr7                 C 0 I 983
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=41422.000000
s hg38.chr14_KI270722v1_random     66750 45 +    194050 TAAGTTGTCACAAAGATTATGGAGTGCACCTGTCTTATGACCTTG
s panTro4.chr3                 125156513 45 - 202329955 TAAGTTGTCACAAAGATTATGGAGTGCACCTGTCTTATGACCCTG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797619 40 - 202140232 TAAGCTGTCACAAAGATTATGA-----CCCTGTCTTATGACTCTG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27490277 39 -  28733288 TAAGTTGTCACAAAGATTATGA-----CCCTGCCTTATG-CCCTG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3402241 45 - 125196307 TACATTGGCACAAGGATTATGAAGTGTACCTACCCTATGACCCTG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120462254 45 - 155834243 taAGTTGTCACAAAGATTATGGAGTGTGCCTGTCTTATGACCCTG
i calJac3.chr7                 I 983 I 667
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=43240.000000
s hg38.chr14_KI270722v1_random     66795 48 +    194050 TTATTTTATCCTACTATACACACCAGAGCATTTTTCCTAACTGTGTAA
s panTro4.chr3                 125156558 48 - 202329955 TTATTTTATCCCAGTATATGCACTAGAGCATTTTTTGTAACTGTGTAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797659 44 - 202140232 TTATTTTATCCTAGTATATACACTAGAGCATTTTTT----CTGTGTAA
i ponAbe2.chr3                 C 0 I 8
s nomLeu3.chr24                 27490316 48 -  28733288 TTATTTTATCCTATTATATATACTAGAGCATTTTTTCTAACTGTGTAA
i nomLeu3.chr24                C 0 I 2638
s papAnu2.chr9                   3402286 46 - 125196307 CTATTGTATTAC-GTATATATGATAGAGCATTTTTC-CAACTGTGTAA
i papAnu2.chr9                 C 0 I 8
s calJac3.chr7                 120462966 48 - 155834243 TTATTTTATCCCAGTATATACACTAGAGCAATTTTTCTAACTATGTAA
i calJac3.chr7                 I 667 I 8
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=142032.000000
s hg38.chr14_KI270722v1_random     66843 152 +    194050 ATTGAAGGCTCACAAATTAGTTTAGTGAGAAAAAAGAAAACAGATTGGAAGAGAATTACTGT----ATTAATTAGTTGTGTTTTTAAAATTT-AAAGTAAAATAGAGACATGA-TTTTTTTCATGCTTTCGAATGCATCT-ATAAAAAATAGACTTGAG
s panTro4.chr3                 125156606 153 - 202329955 ATTGAAGGCTTATAAATTAGTTTAGTGAGAGAAAAGATAACGGATTGGAAGAGAATTACCAT----ATTCATTAGTTGTGTTTTTAAAATTTTAAAGTAAAATAGAGACATGA-TTTTTTTCATGCTTTCGAATGCATTT-ATAAAAAATAGACTTGAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797711 153 - 202140232 ATTGAAGGCTCACAAATTAGCTTGATGAGAGAAAAGATAACGGATTGGAAGAGAATTACCAT----ATTCATTAGTTGTGTTTTTAAAAATTTAAAGTAAAATAGAGACATGA-TTTTTTTCATGCTTTCGAATGCATCT-ATGAAAAATAGACTTGAG
i ponAbe2.chr3                 I 8 C 0
s nomLeu3.chr24                 27493002 153 -  28733288 ATTGAAGGCTCACAAATTAGTTTAGTGAGAGAAAAGATAACGGATTGGAAGAGAATTACTAT----ATTCATTAGTTGTGTCTTTAAAAATTTAAAGTAAAATAGAGACATGA-TTTTTTTCATGCTTTCGAATGCATCT-GTAAAAAATAGACTTGAG
i nomLeu3.chr24                I 2638 C 0
s papAnu2.chr9                   3402340 149 - 125196307 ATTGAAGGCTAACAAGTAACTTGAGTGAG----AACATCCTTTAATGGAAGAGGCttagcattttaatttcttaCTAATTTGTTAACAAACTTGAAGTAAAATTAAGAC------TTTTTACCTACTTTAGAATGCATCTAACAAAAAACAGTCATGGG
i papAnu2.chr9                 I 8 I 43
s calJac3.chr7                 120463022 154 - 155834243 ATTGAAGGCTCACAAATTAGTTTAGTGAGAGAAAAGACAACCGATTGGAAGAGAATTACCAT----ATTCATTATTTGTATTTTGAAAAATTTAAAGTAAAATACAGACATGATTTTTTTTCATGCCTTCTAATGCATCT-ATAAAAAATAGACTTGGG
i calJac3.chr7                 I 8 C 0
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=219753.000000
s hg38.chr14_KI270722v1_random     66995 301 +    194050 ggctgggcgtggtggctcacgcctgtaatcccagcactttgggaggctgaggagggcagatcacgaggtcaggagttcgagaccagcctgaccaacgtggtgaaaccc-gtctctac-taaaaatacaaacattaggcgagtgtggtggtgcccacctgtaatcccagctactcaggaggctgagggaggagaattgctt-----gaacccgggaagcggaggttgcagtgagccgagatcgcaccattgcactccagcctgggtgacagagcgagactctgtctcaaaaaaaaaaaaa----------------------------------------a------GTTACTCA
s panTro4.chr3                 125156759 308 - 202329955 ggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggagggcggatcacgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctaa-taaaaatacaaaaattaggcgagtgtggtggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgctt-----gaacccgggaagcggaggttgcagtgagccgagatcgcaccattgctctccagcctgggcgacagagtgagactccgtctcaaaaaaaaaaaaa----------------------------------------aaaaaaaGTTACTCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159797864 301 - 202140232 ggccaggcgcggtggctcacgcctgtaatcccagcactttggaaggtcaaggagggcggatcacaaggtcaggagtttgagaccagcctgatcaacttggtgaaaccccgtctctac-taaaagtacaaaaattaggtgggtgtggtggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcactt-----gaacccaggaggcggaggttgcagtgagccgatatcgcgccattgcactccagcctgggcgagagagcgagactccatctcaaaaaaaaaaaaa-----------------------------------------------GTTACTCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493155 301 -  28733288 ggctgggcgctgtggctcacgcctgtaatcccagcactttgggaggtaaaggagggcagattacgaggtcaggagttcgagaccagcctgaccaacttggtgaaaccccgtctctac-taaaagtacaaaaattcaaagggtgtggtggagcgcgcctgtaatcccagctactcaggaggctgaggcaacagaatcactt-----gaacttgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaa-----------------------------------------------GTTACTCA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463176 354 - 155834243 ggctgggcgtggtggctcatgcctgtagtcccagcactttcggaggccaaggcgggcggatcatgaagtcaggagttccagaccagcctggacagcatggtcaaaccccatctctacaaaaaaacacaaaaattagctgggcatggtgccgcgtgcctgtagtcccagctactcaggaggctgagacaggagaatcgcttgaaccgaaccagagagggggagtttgcagttagccaagatcacgccactgtactccagcatgggcgacagagcgagactccatctcagaaaaaaaaaGACTTGGGTTCTATAACAGCAATACCTACACTAGAACATAAAAAATAAGGTTATTCA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402489  43 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=94663.000000
s hg38.chr14_KI270722v1_random     67296 94 +    194050 TTAATAGCATAGACCAATTGGCATCTATTGAAATTTCTCCATTATTTTCACAATGTCTCAGGCTGTGAAACCAGGATTTAATAAAGAACCAGAA
s panTro4.chr3                 125157067 94 - 202329955 TTAATAGCATAGACTAATTGGCCTCTATTGAAATTTCTCCATTATTTTCACAATGTCCCAGGCTGTGAAACCAGGATTTAATAAAGAACCAGAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798165 94 - 202140232 TTAATAACATAGACCAATTGGCCTCTATTGGAATTTCTCCATTATTTTCACAATGTCCCAGGCTGTGAAACCAGGATTTAATAAAGACCCAGAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493456 94 -  28733288 TTAATAGCATAGACCAATTGGCCTCTATTGGAATTTCTCTATTATTTTCACAATATCCCAGGTTGTGAAACCAGGATTTAATAAAGAACTAGAA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3402532 93 - 125196307 tTAATATCATCGACTCATTGGGCCACGTTCAAATTTCCCCACAGTTCCCACAATGTTCCCCGTTGTCAGACTAGGA-TTAAGAAAGAACCAGAA
i papAnu2.chr9                 I 43 I 614
s calJac3.chr7                 120463530 93 - 155834243 TTAATTGCATAGACCAATTGGCCGCTATTGGAATTTGCCCATTATTTTCAC-GTGTCCCGGGTTGTGAAACCAGGATTTAATAAAGAAGCAGAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=43832.000000
s hg38.chr14_KI270722v1_random     67390 56 +    194050 TGCCACAAATGTGTCACCTGGGTAGGGACCAGTCCTGATCCATTAAGTCCGGGTCT
s panTro4.chr3                 125157161 56 - 202329955 TGCCACATCTGTGTCACCTGGGTAGGGACCAGTCCTGATCCATTAAGTCCGGGTCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798259 56 - 202140232 TGCCACATCTGTGTCACGTGGGTAGGGACCAGTCCTGATCCATTAAGTCCGGGTCT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493550 56 -  28733288 TGCCACATCTGTGTCACGTGGGTAGGGACCAGTCCTGATCCAATAAGTCCGGGTCT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463623 55 - 155834243 TG-CACACCTGTGTCACATGGGTAGGTACCAGTCCTGAATCAGTAAATCCGGGTCT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1529629 697 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1000.000000
s hg38.chr14_KI270722v1_random     67446 1 +    194050 C
s panTro4.chr3                 125157217 1 - 202329955 C
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798315 1 - 202140232 C
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493606 1 -  28733288 C
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1             1530326 1 +   1849528 C
i rhiRox1.KN299240v1           I 697 I 86
e calJac3.chr7                 120463678 0 - 155834243 C
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=60443.000000
s hg38.chr14_KI270722v1_random     67447 90 +    194050 TGGGTAACTGGACTCACAGCTGGGCAAAGCAGAATGTCCGGCATGCGTTCGTAACAGGGGAACGCAGAGCCTCATGGGAAATGTAGTGTC
s panTro4.chr3                 125157218 90 - 202329955 TGGGTAACTGGACTCACTGCTGGGCAAAACAGAATGTCCGGCGTGGGTTCCTAACGGGGGACCGCAGAGCCTCATGGGAAATGTAGTGTC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798316 89 - 202140232 CGGGTAACCGGACTCACTGCTGGGCAAAATAGAATGTCCGGGGTGCGTTCCTAACGGGGGACCGCAGAGCCTCATGGG-AATGTAGTGTC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493607 90 -  28733288 CGCGTAACCGGACTCACTGCTGGGCAAAATAGAATGTCCGGCGTGCGTTCCTAACAGGGGACCGCAGACCCTCATGGGAAATGTAGTGTC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463678 88 - 155834243 AGGGTAGTGGGACGCACTGCTGGGAAAAACAAAATGTCTGGCA-GGGTGCCTAAC-GGAGTCCGTGGAGCCTCATGGGAAATGTAGTCTC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530327 86 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=8800.000000
s hg38.chr14_KI270722v1_random     67537 8 +    194050 ACCTTCCA
s panTro4.chr3                 125157308 8 - 202329955 ACCTTCCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798405 8 - 202140232 ACCTTCCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493697 8 -  28733288 ACCTTCCA
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1             1530413 8 +   1849528 CCCGCCCA
i rhiRox1.KN299240v1           I 86 I 163
s calJac3.chr7                 120463766 8 - 155834243 ACCTTCCA
i calJac3.chr7                 C 0 C 0
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=102922.000000
s hg38.chr14_KI270722v1_random     67545 151 +    194050 ATGATGTTACCATG-AAGGACCTTGGGAACCAG--TTTTTCTCTCTGCTCATGCGCTGCCCCGCCCACTCCACCATTTTCCTCCGGAAGTGCTCAACCCAGAGGCGGTCCTGAGGCTGGGCAGGCATGCGGCTTGGTTCTATGTCCCTATGGGT
s panTro4.chr3                 125157316 151 - 202329955 ATGATGTTACCATC-AAGGACCCTGGGAACCAG--CTTTTCTCTCTGCGCATGCGCCGCCCCGCCCACTCCGCCATTTTCCTCCGGAAGTGCGGCACCCAGAGGCGGTCTTGTAGCTGGGCCAGCCTGGGGCTTGGTTCTATGTCCCTGCGGGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798413 151 - 202140232 ATGATGTTACCATC-AAGGACTTTGGGAGCCCG--CTTTTCTCTCTGCGCATGCGCCGCCCCACCCACTCCGCCATTTTCCTCCGGAAGTGCGGAACCCAGAGGGCCTCCTGCAGCTGGGCAGTCCTGGGGCTTGGTTCTATGTCCCTGCGGGT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493705 151 -  28733288 ATGATGTTACCATC-AAGGACCTTGGGAACCAG--CTTTTCTCTCTGCGCATGCGCCGCTCCGCCCACTCCGCCATTTTCCTCCGGAAGTGCGGAACACAGAGGCACTCCTGCAGCTCGGCACGCCTGAGACCTGGTTGTATGTTCCTGCGGGT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463774 154 - 155834243 ATGATGTTACCAGCAAAGAACCTTGGGAACCAGCTCTTTTATCTCTGCGCATGAGCCGCCCCGCCTACTCCGCCATTTTCCTCCGACAGTGGGGATTCAAGAGGTCCTTATGCAGCTGGGCAGGGCTGGGGTTGTGTTTTGTGTCCCTGCGGGT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530421 163 +   1849528 I
e saiBol1.JH378110               2991886 1709 +  49021937 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=4895.000000
s hg38.chr14_KI270722v1_random     67696 8 +    194050 CTGTGTGA
s panTro4.chr3                 125157467 8 - 202329955 CGGTGCGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798564 8 - 202140232 GGGTGCGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493856 8 -  28733288 GCGTGCGA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463928 8 - 155834243 CGGTGCGA
i calJac3.chr7                 C 0 C 0
s saiBol1.JH378110               2993595 6 +  49021937 --GTGTAC
i saiBol1.JH378110             I 1709 C 0
e rhiRox1.KN299240v1             1530421 163 +   1849528 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-2860.000000
s hg38.chr14_KI270722v1_random     67704 2 +    194050 GG-
s panTro4.chr3                 125157475 2 - 202329955 GG-
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798572 2 - 202140232 GG-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493864 2 -  28733288 GG-
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1             1530584 1 +   1849528 -G-
i rhiRox1.KN299240v1           I 163 C 0
s calJac3.chr7                 120463936 2 - 155834243 -GA
i calJac3.chr7                 C 0 C 0
s saiBol1.JH378110               2993601 2 +  49021937 -AC
i saiBol1.JH378110             C 0 N 0
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1875.000000
s hg38.chr14_KI270722v1_random     67706 2 +    194050 CC
s panTro4.chr3                 125157477 2 - 202329955 GC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798574 2 - 202140232 GC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493866 2 -  28733288 GC
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1             1530585 2 +   1849528 GC
i rhiRox1.KN299240v1           C 0 I 83
s calJac3.chr7                 120463938 2 - 155834243 GC
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=17972.000000
s hg38.chr14_KI270722v1_random     67708 19 +    194050 GAAGAGGAACCCGTGGGCC
s panTro4.chr3                 125157479 19 - 202329955 GAAGAGGAACCCGTGGGCC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798576 19 - 202140232 GAAGAGGAACCCGTGGGCC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493868 19 -  28733288 GAAGAGGAACCCGTGGGCC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463940 19 - 155834243 GAAGAGGAACCCGCGGGCC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530587 83 +   1849528 I
e panPan1.JH650580              19635268 2659 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1365.000000
s hg38.chr14_KI270722v1_random     67727 1 +    194050 T
s panTro4.chr3                 125157498 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19637927 1 -  19803153 T
i panPan1.JH650580             I 2659 I 10407
s ponAbe2.chr3                 159798595 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493887 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463959 1 - 155834243 T
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530587 83 +   1849528 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=45435.000000
s hg38.chr14_KI270722v1_random     67728 59 +    194050 CGGGGGATCCCGGGGGGCCGGACCAGTGTTCCCCAGTT-GTGGGAGCAGACGCGTGGGCG
s panTro4.chr3                 125157499 59 - 202329955 CGAGGGATCCCGGGGGGCCGGACCAGTGTTCCCCAGTT-GTGGGAGCAGACGCGTGGGCG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798596 60 - 202140232 CGGGGGATCCCGGGGGACCGGACCGGTGTTCCCCAGTTGGTGGGAGCAGAAGGTTGGGCG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493888 59 -  28733288 CAGGGGATCCCGGGGG-CCGGACCAGTGTTCCCCAGTTGGTGGGAGCAGAAGCGTGGGCG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120463960 60 - 155834243 CGGGGAATCCTGGGGGGCCGGACCGGTGTCTCCCAATTGGTGGGAGCAGAAGCGTGGGCG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530587 83 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=260.000000
s hg38.chr14_KI270722v1_random     67787 2 +    194050 CA
s panTro4.chr3                 125157558 2 - 202329955 CA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798656 2 - 202140232 CA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493947 2 -  28733288 CA
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1             1530670 1 +   1849528 C-
i rhiRox1.KN299240v1           I 83 I 194
s calJac3.chr7                 120464020 2 - 155834243 CA
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=51452.000000
s hg38.chr14_KI270722v1_random     67789 72 +    194050 TCGCAGGCGAGCGAGGCCTGACGTGCCGGTGCGGGCCGCAGACAGTGGCAGGTGCTGGGAGGACACGCTTGG
s panTro4.chr3                 125157560 72 - 202329955 TCGCGGGCGGGCAGGGCCTGAAGTGCAGGTGCGGGCCGCGGACCCTGGCGAGGGCTGGGAGGACAGGCGTGG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798658 72 - 202140232 TCGCGGGCGGGCGGGGCCTGACGTGCAAGTGCGCGCCGCGGACCGTGACGGGGGCTGGAAGGACAGGCGTGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27493949 72 -  28733288 TCGCGGGCGGGCGGGGCCTGACGTGCAGGTGCGGGCCGCGGACCCTGGCGGGGGCTGGGAGGACAGGCGTGG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464022 70 - 155834243 TCGCGGGCGGGCGGGGCCTGACGTGCAGGTGCGGGCAGCGGAACCTGGCGGGG--TGGGAGAACAGTTGCGG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530671 194 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1500.000000
s hg38.chr14_KI270722v1_random         67861 1 +    194050 G
s panTro4.chr3                     125157632 1 - 202329955 G
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798730 1 - 202140232 G
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494021 1 -  28733288 G
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464092 1 - 155834243 G
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    308738 1 -    367680 G
i tupBel1.scaffold_108772.1-367680 N 0 I 102
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=45823.000000
s hg38.chr14_KI270722v1_random         67862 62 +    194050 GTCCCGGCAGTGAAGCGGGTTTCAGAGGCCCAGGAGCACGTAGTCAAGGCCGGTGGCCCTGG
s panTro4.chr3                     125157633 62 - 202329955 ATCCCGGCAGTGAAGCGGGTTCTAGAGGCGCAGGAGCGGGTAGGCGAGGCCGGTGGCCCTGG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798731 62 - 202140232 GTCCCGGCACTGAAGCGGGTTCTAGAGGCGCAGGAGGGGGTAGGCGAGGCCGGTGGCTCTGG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494022 62 -  28733288 GTCCCGGCACTGAAGCGGGTTCTAGAGGCGCAGGAGCGGGTAGGCGAGGCCGGTGGCCCTGG
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464093 61 - 155834243 G-CCCGGCACAGAAGCGGGTTCCAGAGGCGCCGGAGCTGGTAGGCGAGGTCAGTGGCCCTGT
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    308739 102 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=845.000000
s hg38.chr14_KI270722v1_random         67924 1 +    194050 G
s panTro4.chr3                     125157695 1 - 202329955 G
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798793 1 - 202140232 G
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494084 1 -  28733288 G
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464154 1 - 155834243 G
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    308841 1 -    367680 A
i tupBel1.scaffold_108772.1-367680 I 102 I 34
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=15376.000000
s hg38.chr14_KI270722v1_random         67925 20 +    194050 CCCGGAGTCTGCAGGCCACG
s panTro4.chr3                     125157696 20 - 202329955 CCCGGAGTCTGCAGGCTGCG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798794 20 - 202140232 CCCGGAGTCTGCAGGCCACG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494085 20 -  28733288 CCCGGAGTCTGCAGGCCACG
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464155 20 - 155834243 GCCGGAGTCTGAAGGCTGGG
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    308842 34 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=845.000000
s hg38.chr14_KI270722v1_random         67945 1 +    194050 C
s panTro4.chr3                     125157716 1 - 202329955 C
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798814 1 - 202140232 C
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494105 1 -  28733288 C
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464175 1 - 155834243 C
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    308876 1 -    367680 t
i tupBel1.scaffold_108772.1-367680 I 34 I 45
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=11351.000000
s hg38.chr14_KI270722v1_random         67946 16 +    194050 TCCTGTCTTGCTGCTG
s panTro4.chr3                     125157717 16 - 202329955 TTCTGTCCTGCCACTG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798815 16 - 202140232 TCCTGCCCTGACGCTG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494106 16 -  28733288 TCCTGCCCTGCCGCTG
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464176 16 - 155834243 TCCTGCCTTGCCACTG
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    308877 45 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=2210.000000
s hg38.chr14_KI270722v1_random         67962 2 +    194050 AG
s panTro4.chr3                     125157733 2 - 202329955 AG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798831 2 - 202140232 AG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494122 2 -  28733288 AG
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464192 2 - 155834243 AG
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    308922 2 -    367680 aa
i tupBel1.scaffold_108772.1-367680 I 45 I 9
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=7772.000000
s hg38.chr14_KI270722v1_random         67964 9 +    194050 GGACCTGGT
s panTro4.chr3                     125157735 9 - 202329955 GGACCCAGT
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798833 9 - 202140232 GGACCCGGT
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494124 9 -  28733288 GGACCCGGT
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464194 9 - 155834243 GGACCCGGT
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    308924 9 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=1705.000000
s hg38.chr14_KI270722v1_random         67973 2 +    194050 TA
s panTro4.chr3                     125157744 2 - 202329955 TA
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798842 2 - 202140232 TA
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494133 2 -  28733288 TA
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464203 2 - 155834243 TA
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    308933 2 -    367680 ga
i tupBel1.scaffold_108772.1-367680 I 9 I 41
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=26033.000000
s hg38.chr14_KI270722v1_random         67975 34 +    194050 CCAACTCGCATGTCACTC-AGTTTGCCCATCTGTC
s panTro4.chr3                     125157746 34 - 202329955 CCAACCCGCATGACGCTC-AGTTTGCCCATCTGTC
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798844 34 - 202140232 CCAACCCGCATGACGCTC-AGTTTGCCCATCTGTC
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494135 34 -  28733288 CCAACCCCCATGACGCTC-AATTTGCCCATCTGTC
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464205 35 - 155834243 CCAACCCGCGTGAGACTCAAGTTTGCCCATCTGTC
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    308935 41 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=-336.000000
s hg38.chr14_KI270722v1_random         68009 6 +    194050 -CCAGT-G-
s panTro4.chr3                     125157780 6 - 202329955 -CCAGT-G-
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798878 6 - 202140232 -CCGGT-G-
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494169 6 -  28733288 -CCGGT-G-
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464240 7 - 155834243 -CCGGGAG-
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    308976 8 -    367680 acatga-gg
i tupBel1.scaffold_108772.1-367680 I 41 I 16
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=6772.000000
s hg38.chr14_KI270722v1_random         68015 10 +    194050 CTAACACACA
s panTro4.chr3                     125157786 10 - 202329955 CTAACACACA
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798884 10 - 202140232 CTAACACACA
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494175 10 -  28733288 CTAACACACA
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464247 10 - 155834243 CGAGTACTCA
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    308984 16 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=-1824.000000
s hg38.chr14_KI270722v1_random         68025 1 +    194050 -G
s panTro4.chr3                     125157796 1 - 202329955 -G
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798894 1 - 202140232 -G
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494185 1 -  28733288 -G
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464257 1 - 155834243 -A
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    309000 1 -    367680 T-
i tupBel1.scaffold_108772.1-367680 I 16 I 20
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=16068.000000
s hg38.chr14_KI270722v1_random         68026 20 +    194050 TTCTCGGGAGACTTTCCCCA
s panTro4.chr3                     125157797 20 - 202329955 TTCTCGGGAGACGTTCCCCA
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798895 20 - 202140232 TTCTCGGGAGACGTTCCCCA
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494186 20 -  28733288 TTCTCGGGAGACGTTCCCCA
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464258 20 - 155834243 TTCTCGGGAGATGCCCCACA
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    309001 20 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=-1390.000000
s hg38.chr14_KI270722v1_random         68046 1 +    194050 -T
s panTro4.chr3                     125157817 1 - 202329955 -T
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798915 1 - 202140232 -T
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494206 1 -  28733288 -T
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464278 1 - 155834243 -T
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    309021 1 -    367680 G-
i tupBel1.scaffold_108772.1-367680 I 20 I 47
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=7082.000000
s hg38.chr14_KI270722v1_random         68047 12 +    194050 TTCCAGAGTAGT
s panTro4.chr3                     125157818 12 - 202329955 TCCCAGAGGAGT
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798916 12 - 202140232 TCCCAGAGGAGT
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494207 12 -  28733288 TCCCAGAGGAGT
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464279  9 - 155834243 TCCCAGAGG---
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    309022 47 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=-2210.000000
s hg38.chr14_KI270722v1_random         68059 1 +    194050 -A
s panTro4.chr3                     125157830 1 - 202329955 -A
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798928 1 - 202140232 -A
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494219 1 -  28733288 -A
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464288 1 - 155834243 -C
i calJac3.chr7                     C 0 C 0
s tarSyr2.KE946707v1                   45149 1 +    169463 C-
i tarSyr2.KE946707v1               N 0 I 136
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    309022 47 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=10104.000000
s hg38.chr14_KI270722v1_random         68060 12 +    194050 GTGTGAAATGCG
s panTro4.chr3                     125157831 12 - 202329955 GTGCGAAACGCG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798929 12 - 202140232 GTGCGAAACGCG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494220 12 -  28733288 GTGCGAAACGCG
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464289 12 - 155834243 GTGCGAAGCGCG
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530671 194 +   1849528 I
e tupBel1.scaffold_108772.1-367680    309022 47 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e tarSyr2.KE946707v1                   45150 136 +    169463 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=7417.000000
s hg38.chr14_KI270722v1_random         68072 9 +    194050 TGCACCTCT
s panTro4.chr3                     125157843 9 - 202329955 TGCGCCTCG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798941 9 - 202140232 TGCGCCTGG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494232 9 -  28733288 TGCTCCTCG
i nomLeu3.chr24                    C 0 C 0
s rhiRox1.KN299240v1                 1530865 9 +   1849528 TGCACGCCG
i rhiRox1.KN299240v1               I 194 I 15689
s calJac3.chr7                     120464301 9 - 155834243 TGCGCCTCG
i calJac3.chr7                     C 0 C 0
e tupBel1.scaffold_108772.1-367680    309022 47 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e tarSyr2.KE946707v1                   45150 136 +    169463 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=5048.000000
s hg38.chr14_KI270722v1_random         68081 10 +    194050 AGTCTTAA-AA
s panTro4.chr3                     125157852 10 - 202329955 AGTCTTAA-AC
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798950 10 - 202140232 AGTTTTAA-AC
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494241 10 -  28733288 AGTCTTAA-AC
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464310 11 - 155834243 AGTCTTACTAT
i calJac3.chr7                     C 0 C 0
e rhiRox1.KN299240v1                 1530874 15689 +   1849528 I
e tupBel1.scaffold_108772.1-367680    309022 47 -    367680 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e tarSyr2.KE946707v1                   45150 136 +    169463 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=398.000000
s hg38.chr14_KI270722v1_random         68091 1 +    194050 T
s panTro4.chr3                     125157862 1 - 202329955 T
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159798960 1 - 202140232 T
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27494251 1 -  28733288 T
i nomLeu3.chr24                    C 0 C 0
s calJac3.chr7                     120464321 1 - 155834243 C
i calJac3.chr7                     C 0 C 0
s tupBel1.scaffold_108772.1-367680    309069 1 -    367680 C
i tupBel1.scaffold_108772.1-367680 I 47 N 0
e rhiRox1.KN299240v1                 1530874 15689 +   1849528 I
e panPan1.JH650580                  19637928 10407 -  19803153 I
e tarSyr2.KE946707v1                   45150 136 +    169463 I
e gorGor3.chr3                     122193145 14325 - 199944510 I
e papAnu2.chr9                       3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225501947 46117 - 229590362 I

a score=104271.000000
s hg38.chr14_KI270722v1_random     68092 128 +    194050 TGGCGTTTGTATTAGTTGGGTTTCCTGGTGTCTCTTTAGCAAGTGAAATTTCTTGTTCCCTCCTTCACTGTGTGACCTGCCTAGTCCTCCTGGGTTGCATTTACAGAAGTTTATACGAGACCTAGTTT
s panTro4.chr3                 125157863 128 - 202329955 GGGCGTTTGTATTAGTTGGGTTTCCCGGTGTCTCTTTAGCAAGTGAAGTTTCTGGTTCCCTCCTTCACTGTGTGACCTGCCTAGTCCTCCTGGGTTGCGTTTACAGAAGTTTATACGAGACCTAGTTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159798961 128 - 202140232 GGGCGTTTTTATTAGTTGGGTTTCCCGGTGTCTCTTTAGCAAGTGAAGCTTCTGGTTCCGTCCTTCACTGTGTGACCTGCCTAGTCCTCCCGGGTTGCGTTTACGGAAGTTTGTACCAGACCTAGTTT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494252 128 -  28733288 GGGCGTTTGTATTAGTTGGGTTTCCCGGTGTCTCTTTAGCAAGTGAAGTTTCTGGTTCCCTCCTTCACTGTGTGACCTGCCTAGTCCTCCTGGGTTGCGTTTACAGAAGTTTATACGAGACCTAGTTT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464322 128 - 155834243 TGGCGTTTGTATTCGTTGGGTTTTCCGGCGTCTCTTTGGCGAGTGAAGTTTCTGGTGTGAAACTTCACTGTGTGACCGGCCTAGTCCTCCTGGGTTGAGTTTACAGAAGTTTATACAAGACCTAGTTT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45150 136 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=14195.000000
s hg38.chr14_KI270722v1_random     68220 21 +    194050 CCAGGGAAGAACTCACTGATT-
s panTro4.chr3                 125157991 21 - 202329955 CCAGGGAAGAACTCACTGATG-
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799089 21 - 202140232 CCAGGGAAGAACTCACTGATT-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494380 21 -  28733288 CCAGGGAAGAACTCACTGATT-
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464450 21 - 155834243 CCAGGGAAGAAGTCACGGATT-
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               45286 16 +    169463 ------GCGGGCGCGGTGAGTT
i tarSyr2.KE946707v1           I 136 I 85
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=37091.000000
s hg38.chr14_KI270722v1_random     68241 43 +    194050 CCACGAGGGAGATGGGGTAATGGATGATGGTCTTCAGCCTTAA
s panTro4.chr3                 125158012 43 - 202329955 CCGCGAGGGAGATGGGGTACTGGATGATGGTCTTCAGCCTTAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799110 43 - 202140232 CCGCGAGGGAGGTGGGGTACTGGATGATGGTCTTCAGCCTTAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494401 43 -  28733288 CCGCGAGGGAGGTGGGGTACTGGATGATGGTCTTCAGCCTTAA
i nomLeu3.chr24                C 0 I 301
s calJac3.chr7                 120464471 43 - 155834243 TTGCGAGGGAGATGGGATACTGGATGATGGTCTTCAGTCTTAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45302 85 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=15844.000000
s hg38.chr14_KI270722v1_random     68284 20 +    194050 GGGTACTTCAGTCTTAACTG
s panTro4.chr3                 125158055 20 - 202329955 GGGTACTTCAGTCTTAACCG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799153 20 - 202140232 GGGTACTTCAGTCTTAAGCG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494745 20 -  28733288 GGGTACTTCAGTCTTAACCG
i nomLeu3.chr24                I 301 C 0
s calJac3.chr7                 120464514 20 - 155834243 GGGTTCTTCAGTCTTggccg
i calJac3.chr7                 C 0 I 302
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45302 85 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=546.000000
s hg38.chr14_KI270722v1_random     68304 1 +    194050 T
s panTro4.chr3                 125158075 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799173 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494765 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120464534 302 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45302 85 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=24372.000000
s hg38.chr14_KI270722v1_random     68305 31 +    194050 GTGTTACAAAGCTTGAAATGGAGGGTTCCCT
s panTro4.chr3                 125158076 31 - 202329955 GTGTTATAAAGTTTGAAAGGGAGGGTTCCCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799174 31 - 202140232 GTGTTATAAAGTTTGAAGGGGAGGGTTCCCT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494766 31 -  28733288 GTGTTATAAAGTTTGAAGGGGAGGGTTCCCT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464836 31 - 155834243 GTGTTACAAAGTTTGAAGGGGAGGATAACCT
i calJac3.chr7                 I 302 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45302 85 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=3960.000000
s hg38.chr14_KI270722v1_random     68336 4 +    194050 ATGA
s panTro4.chr3                 125158107 4 - 202329955 ATGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799205 4 - 202140232 ATGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494797 4 -  28733288 ATGA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464867 4 - 155834243 ATGA
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               45387 4 +    169463 GGGA
i tarSyr2.KE946707v1           I 85 I 71
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=53158.000000
s hg38.chr14_KI270722v1_random     68340 68 +    194050 ATAAGAAGTGCACTTGAAAGAACAGCCATCTGGTCTAACCTCTCAC---TGGTGTTTCAGAGGAGGAAAAA
s panTro4.chr3                 125158111 68 - 202329955 ATAAGAAGCGCACTTGAAAGAACAGCCCTCTGGTCTAACCTCTCAC---TGGTGCTTCAGAGGAGGATAAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799209 68 - 202140232 ATAAGAAGCGCACTTGAAAGAACAGCCCTCTGGTCTAACCTCTCAC---TGGTGCTTCAGAGGAGGAAAAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494801 71 -  28733288 ATAAGAAGCACACTTGAAAGAACAGCCCTCTGGTCTAATCTCTCACTGGTGGTGCTTCAGAGGAGGAAAAA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464871 68 - 155834243 ATAAGAATCTCACTTGAAAGAACACCCCTCTGGTCTAACCTCTAAT---CAGTGCTTCAGAGGAGAATAAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45391 71 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-1926.000000
s hg38.chr14_KI270722v1_random     68408 2 +    194050 A---G
s panTro4.chr3                 125158179 2 - 202329955 A---G
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799277 4 - 202140232 A-AGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494872 5 -  28733288 AAAGG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464939 5 - 155834243 AAAGG
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               45462 2 +    169463 ---GG
i tarSyr2.KE946707v1           I 71 I 46
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=33494.000000
s hg38.chr14_KI270722v1_random     68410 42 +    194050 GTCACAGGTGAAGATCCCAGTTTTCCTCTCTCAGGAAA-TATT
s panTro4.chr3                 125158181 42 - 202329955 GTCACAGGTGAAGATCTCAGTTTTCCTCGCTCGGGAAA-TATT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799281 42 - 202140232 GTCACAGGTGAAGATCCCAGTTTTCCTCGCTCAGGAAA-TATT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494877 42 -  28733288 GTCACAGGTGAAGATCCCAGTTTTCCTCGCTGAGGAAA-TATT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464944 43 - 155834243 ATCACAGATGAAGATCCCAGTTTTCCTGGCTCAGGAAATTATT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45464 46 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=755.000000
s hg38.chr14_KI270722v1_random     68452 1 +    194050 A
s panTro4.chr3                 125158223 1 - 202329955 A
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799323 1 - 202140232 A
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494919 1 -  28733288 A
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464987 1 - 155834243 A
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               45510 1 +    169463 G
i tarSyr2.KE946707v1           I 46 I 286
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=199881.000000
s hg38.chr14_KI270722v1_random     68453 260 +    194050 ATTCTACTCCCTATAATGCACAAGAATTGCAAAGACTAGGTGATGGTAGAAGGTTTGGACGAACTTTCAGAAAGTTGAGGTGAATTCAGCTGAGAAGAACAGGCAAGG-ACCTAGGAAATATTCCTT-ATTTGAAGGGGCCTGAAAGTGTGGTCTGTGGTACAGGAGTGACCTGTCATACCTGAGAAGAT-----TAAAATACTCTCCAAACGCAGTCCCATTCCTTCAAACTTAGCTCGTTGTTTCCAGCGTCTGAGATATATTAA
s panTro4.chr3                 125158224 260 - 202329955 ATTCTACTCCCTAGAATGCACAAGATTTGCAAAGACTAGGTGACAGTGGAAGGTTTGGACGAACTTTCAGAAGGTTGAGGTGAATTCGGCTGAGAAGAACAGGCAAGG-ACCTAGGAAATATTCCTT-ATTTGAAGGGGCCTGAAAGTGTGGTCTGGGGTACAGGAGTGACCTGTCATACCTGAGAAGAT-----TAAAATACTCTCCAAACACGGTCCCATTCCTTCAGCCTTTCCTCGTTGTTTCCAGCGTTTGAGGTATATTAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799324 257 - 202140232 ATTCTACTCCCTAGAATGCACGAGATTTGCAAAGACTAGGTGGTAGTGGAAGGTTTGGACGAACTTTCAGAAGGTTGAGGTGAATTCGGCTGAGAAGAACAGGCAAGG-ACCTAGGAAATATTCCTT-ATTTGAAGGGGCCTGAAAGTGTGGTCTGGGGTTCAGGAGTGATCTGTCATACCTGAGAAGAT-----TAAAATACTCTCCAAACACAGTCCCATTCCTTC---CTTAGCTCGTTGTTTCCAGCGTCTGAGATACATTAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27494920 260 -  28733288 GTTCTACTGCCTAGAATGCACGAGATTTGCAAAGACTAGGTGATAGTGGAAGGTTTGGACGAACTTTCAGAAGGTTGAGGTGAATTCGGCTGAGAAGAACAGGCAAGG-ACCTAGGAAATCTTCCTT-ATTTGAAGGGGCCTGAAAGTGTGGTCTGGGGTGCAGGAGTGACCTGTCATACCTGAGAAGAT-----TAAAATACTCTCCAAACACAGTCCCATTCTTTCAACCTTAGCCCGTTGTTTCCAGCGTCTGAGATACATTAA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120464988 264 - 155834243 ATT---CTCCCTAGAATGCACAAGATTTGCAAAGACTGGGTGATAGTGGAAGGTTGGGATGAACTTTCAGAAAGATGAGGTGAATTCGGCTGAGACGAACAGGCATGGCACCTAGAAAATACTACTTAATTGGAAGGGACTTGAAAGTGTGGTCTGTGGTGCACGAGTAACCTGATATATCTGAGAAGATTTCTCTGAAGTACTCTCTAAACACAGTCTCATTCCTTCAATCTTAACTAGTCGTTTCCAGTGTCTGAGCTATCTTAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45511 286 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=6746.000000
s hg38.chr14_KI270722v1_random     68713 10 +    194050 ACCTAGTCCA
s panTro4.chr3                 125158484 10 - 202329955 ACCTAGTCCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799581 10 - 202140232 ACCTAGTCCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495180 10 -  28733288 ACCTAGTGCC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120465252 10 - 155834243 ACCTGGTCTG
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               45797 10 +    169463 CTCAAGTTTA
i tarSyr2.KE946707v1           I 286 I 946
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=10569.000000
s hg38.chr14_KI270722v1_random     68723 15 +    194050 TCACCAGA------TTTAGCA
s panTro4.chr3                 125158494 21 - 202329955 TCACCAAATTTAGCTTTAGCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799591 15 - 202140232 TCACCAAA------TTTAGCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495190 15 -  28733288 TCACCAAA------TTTAGCA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120465262 15 - 155834243 TCACCAGA------TTTGGCA
i calJac3.chr7                 C 0 I 1274
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45807 946 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=7694.000000
s hg38.chr14_KI270722v1_random     68738 10 +    194050 TTAGATTGTG
s panTro4.chr3                 125158515 10 - 202329955 TTAGATTGTG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799606 10 - 202140232 TTAGATTGTG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495205 10 -  28733288 TTAGATTGTG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120466551 10 - 155834243 TAAGAGTGTG
i calJac3.chr7                 I 1274 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45807 946 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3402625 614 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=64020.000000
s hg38.chr14_KI270722v1_random     68748 73 +    194050 AAGTTCTATTGATTGTATTTGATTTTTAATTTAAGATTTTCTCCCCCTACGTAATTTTGTTAAAAACACAGAA
s panTro4.chr3                 125158525 70 - 202329955 AAGTTCTGTTGATTGTATTTGATTTGTAATTTAAGACTTTCTCCCCCTACGTAATTTTGTTAAAAACAT---A
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799616 69 - 202140232 AAGTTCTATTGATTGTATTTGATTAGTAATTTAAGAGTTCCTCCCCTTATGTAATTTTGTTAAAAACAT----
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495215 70 -  28733288 AAGTTCTATTGATTGTATTTGATTTGTAATTTAAGACTTTGTCCCCCTACGTAATTTTGTTAAAAACAT---A
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403239 69 - 125196307 AAGTGCTGTTGATTGTATTTAACATACACATTAAGACTTTCTTCCCC-ACATAATTTTCTTAGATATAT---A
i papAnu2.chr9                 I 614 C 0
s calJac3.chr7                 120466561 69 - 155834243 AAGTTCTATTGATTGTATTTGACTTGTACTTGAAGATTTTCTCCCCA-ACATAATTTTGTTTAAAACGT---A
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45807 946 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=67484.000000
s hg38.chr14_KI270722v1_random     68821  83 +    194050 -GTGAATT---CTGTTCACTTAGGtgtaacagttaatacttgc------------tgtttaaagaactaattaaacctt---actggcttattaaaaaacaa-
s panTro4.chr3                 125158595  82 - 202329955 -TTGAATT---CTGTTCACTTAGGtgtaacagttaatacttgc------------tgtttaaggaactaattaaacctt---actggctta-taaaaaacaa-
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799685  81 - 202140232 --TGAATT---CTGTTCGCTTAGGtgtaacagttaatacttgc------------tgtttaaggaactaattaaacctt---actggctta-taaaaaacaa-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495285  79 -  28733288 -TTGAATT---CTGTTCGCTTAGGtgtaacagttaatacttgc------------tgtttaaggaactaattaaacctt---actggctta-tagaa---aa-
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403308  80 - 125196307 -TCAAGTT---TTGATGGCTTAGATGTATCAGTTAGCATTTTC------------TTTACAAGAAAGTAATCAgagctt---agtggct---taaaaaacaa-
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120466630  80 - 155834243 -CTGAATT---CTGTTTGCTTAAGTGTAACAGTTAATACTTGC------------TGTTTAAGGAGATAATCAAACCTT---AATGACT---TAAAAAAAAC-
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1038402 102 -   1077187 actgaggcaagatgataatttgagctcaagagtttgaggttgccatgagctatgatgtcacaagacagggcaacagcttgagactgtctca-aaaaaaaAAAA
i otoGar3.GL873804             N 0 T 29666
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45807 946 +    169463 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=29507.000000
s hg38.chr14_KI270722v1_random     68904 28 +    194050 cctccattttatttgtttgaagttctgt
s panTro4.chr3                 125158677 28 - 202329955 ccaccattttatttgtttgaagttctgt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799766 28 - 202140232 ccaccattttatttgttcgaagttctgt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495364 28 -  28733288 ccaccattttatttgttcgaagttctgc
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403388 28 - 125196307 ccaccattttCTTTGTTCAAGCTTCTGT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120466710 28 - 155834243 CAACTGTTTTATTTGTTTGACATTCTGT
i calJac3.chr7                 C 0 I 278
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45807 946 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=62478.000000
s hg38.chr14_KI270722v1_random     68932 89 +    194050 ggatctgcattttggtgtggtgggttcagctgggtagttga-----tatatttgtgttgcctggatcacagaagagcccttagtcacctggtgc
s panTro4.chr3                 125158705 89 - 202329955 ggatctgcattttggtgtggtgggttcagctgggtagttga-----tatatttacgttgcctggatcacaaaagaggccttggtcacctggtgc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799794 89 - 202140232 ggatctgcattttggtgtggtgggttcagctgtgtagttga-----tatatttgtgttgcctggatcacaaaagaggccttggtcacctggtgc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495392 89 -  28733288 ggatctgcattttcgtgtggtgggttcagctgggtagttga-----tatatttgtgttgcctggatcacaaaagaggccttggtcacctggtga
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403416 91 - 125196307 GGATCTGTATTT---TGTGGTGGGTTCATTTGGACAGTTCATATTCTATGTTAGTGTTGCTTGGATCATGAGTGACAGTTGAGTCACCTGGTGC
i papAnu2.chr9                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120466738 278 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               45807 946 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=24886.000000
s hg38.chr14_KI270722v1_random     69021 29 +    194050 cttgactgagc-------ctggttggtttaagatag
s panTro4.chr3                 125158794 29 - 202329955 cttgactgagc-------ctggttggtttaagatag
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799883 29 - 202140232 cttgactgagc-------ctggttggttgaagatag
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495481 29 -  28733288 cttgactgagc-------ctggttggttgaagatag
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403507 35 - 125196307 C-TGGCTGAGTCTCCTGGCTGGTTGGCTTAAGATGC
i papAnu2.chr9                 C 0 C 0
s tarSyr2.KE946707v1               46753 29 +    169463 cttgactgaga-------ctatatgtttcaagatgg
i tarSyr2.KE946707v1           I 946 I 35
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120466738 278 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=23154.000000
s hg38.chr14_KI270722v1_random     69050 34 +    194050 tttccttcaca-atctggtggtttgtggtgactct
s panTro4.chr3                 125158823 34 - 202329955 tttccttcaca-atctggcggcttgtggtgactct
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799912 34 - 202140232 tttccttcaca-gtctggcggtttgtggtgactct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495510 34 -  28733288 tttccttcaca-atctggcggtttCTGGTGACTCT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403542 35 - 125196307 CTTTACTCACATGTCTTGTGGTTTGTGCTGGCTCT
i papAnu2.chr9                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120466738 278 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               46782 35 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=22117.000000
s hg38.chr14_KI270722v1_random     69084 18 +    194050 tggctaggccctgtgtct
s panTro4.chr3                 125158857 18 - 202329955 tggctaggccctgtgtct
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799946 18 - 202140232 tggctaggccctgtgtct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495544 18 -  28733288 TGGCTAGGCCCTGTGTCT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403577 18 - 125196307 CTGCTAGGCACTGTGTCT
i papAnu2.chr9                 C 0 C 0
s tarSyr2.KE946707v1               46817 18 +    169463 tagctaggccctgtatct
i tarSyr2.KE946707v1           I 35 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120466738 278 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=51758.000000
s hg38.chr14_KI270722v1_random     69102 38 +    194050 ccaacagggtagctccagacctcttcacagtatgactg
s panTro4.chr3                 125158875 38 - 202329955 ccaccagggtagctccagacctcctcacaatatgactg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159799964 38 - 202140232 ccaacagggtagctccagacctcctcacaatatgactg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495562 38 -  28733288 CCAACAGGGTAGCTCCAGACCTCTTCACAATATGACTG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403595 37 - 125196307 CCAACA-GGTAGCCCCAGGATTCTTCACAATATGACTG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467016 37 - 155834243 CCAACAGGGTAGCT-CAAACTTCTTCACAATGTGACTA
i calJac3.chr7                 I 278 C 0
s tarSyr2.KE946707v1               46835 38 +    169463 ccaactgattagaaccaggcttcttcacggtatgattg
i tarSyr2.KE946707v1           C 0 I 352
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=21101.000000
s hg38.chr14_KI270722v1_random     69140 26 +    194050 tgtccaaaatggcaagaaccaatgg-----------------------------a
s panTro4.chr3                 125158913 26 - 202329955 tgtccaaaaaggcaagaaccaatgg-----------------------------a
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800002 26 - 202140232 tgtccaaaaaggcaagaaccaatgg-----------------------------a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495600 26 -  28733288 TGTCCAAAAAGGCAAGAACCAATGG-----------------------------G
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403632 45 - 125196307 TGTCCAAGAAGGCAAGCACCATTAGGCAAATACTTTT----------TTAATCTA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467053 55 - 155834243 TGTCCAAAAAGGCAAGAACCAGTAGGCAAATACTTTTCAGCTCACCGCAAACCTA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               46873 352 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=10371.000000
s hg38.chr14_KI270722v1_random     69166 6 +    194050 tatttg
s panTro4.chr3                 125158939 6 - 202329955 tatttg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800028 6 - 202140232 tatttg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495626 6 -  28733288 tatttg
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403677 6 - 125196307 TATTTG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467108 6 - 155834243 TATTTG
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               47225 6 +    169463 tatttt
i tarSyr2.KE946707v1           I 352 I 15
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=14040.000000
s hg38.chr14_KI270722v1_random     69172 14 +    194050 catcacattttcca
s panTro4.chr3                 125158945 14 - 202329955 catcacattttcca
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800034 14 - 202140232 cgtgacattttcca
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495632 14 -  28733288 catcacgttttcca
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403683 14 - 125196307 CATCACATTTGCCT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467114 13 - 155834243 -ATCACATTTTTCA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               47231 15 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=60.000000
s hg38.chr14_KI270722v1_random     69186 1 +    194050 t
s panTro4.chr3                 125158959 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800048 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495646 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403697 1 - 125196307 G
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467127 1 - 155834243 T
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               47246 1 +    169463 c
i tarSyr2.KE946707v1           I 15 I 1473
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=255773.000000
s hg38.chr14_KI270722v1_random     69187 267 +    194050 tgtccattcact--ggacaagtcagatggaaaagcccaatttattgtcagagcata--atatgagggcttggatagaaggaaaggtgttattgggaaacatgagtagaatggtgtactgcaGGAAGTACATATTATGTACATTTT-----------------------------------------------------------------------AAAAAACAT--------------------------AATTGTAGGC-CAAAATTGCTGGTTTGCAAGATGC--ACTTTCCATGATGTTCAGGTATAGAAAAGCAAGATGTACT----GTCATGGGAACACTCATATGAAGTTATTTGTGGAATCCACATA
s panTro4.chr3                 125158960 267 - 202329955 tgtccattcact--ggacaagtcagatggaaaagcccaatttattgtcagagcata--atatgagggcttggatacagggaaaggtgttattgggaaacatgagtagaatggtgtactgcaGGAAATACATATTATGTACATTTA-----------------------------------------------------------------------AAAAAAAGT--------------------------AATTGTAGGC-CAAAATTGCTGGGTTGCAAGATGC--ACTTTCCATGATGTTCAGGTATAGAAAAGCAAGATGTACT----GTCATGGGAACACTCATATGAAGTTATTTGTGGAATCCACATA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800049 266 - 202140232 tgtccattcact--ggacaagtcagatggaaaagcccaatttattgtcagggcgta--atatgagggctt-gatacagggaaaagtgttactgggaaacatgagtagaatggtgtactgcaGGAAATACGTATTATGTACATTTA-----------------------------------------------------------------------AAAAAATGT--------------------------AATTGTAGGC-CAAAATTGCTGGGTTGCAAGATGC--ACTATCCATGATGTTCAGGTATAGAAAAGCAAGATGTACT----GTCATGGGAACACTCATATGAAGTTATTTGTGAAATCCACATA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495647 267 -  28733288 tgtccattcact--ggacaagtcagatggaaaagcccaatttattgtcagggtgta--atatgagggcttggatacagggaaaggtgttattgggaaacatgagtagaatggtgtactgcaGGAAATACATATTATGTACATTTA-----------------------------------------------------------------------AAAAAACGT--------------------------AATTGTAGGC-CAAAATTGCTGGGTTGCAAGATGC--ACTTTCCATGATGTTCTGGTATAGAAAAGCAAGATGTACT----GTCATGGGAACACTCATATGAAGTTATTTGTGGAATCCACATA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3403698 374 - 125196307 TGTCCCATTATTCAAGGCAAGTCAAAAGGCAAAGCCCAGTTCATCATCACAGCACATTACATGAGGTCTTGGATACAGGGAGACTTGTCATTGGGAAACATTACTGGAACAGTGTACCATAAGAAATATACATTATGTACATTTGTTTCCGTAAGAAATATACATTATGTACATTTGTTTCCGTAAGAAATATACATTATGTACATTTGTTTCCGTAAGAAATATACATTATGTACATTTGTTTCCGATACAGTCATGGGCaaaaaaaTGTTCGTTTGCAAGATGCATATTTTGCATGATATCTAGATATATAAAAGCAAGATGTGTTAGAGATAGTGGAAACAC-CACATAGAGTCCTGCATGGAACCCACATA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467128 256 - 155834243 TGTCCATTCATT--GGACATGTCAAATGGAAAAGCCCAATTCATTGTCAGAGCATA--ATATGAGGGCTTGGATACAGGGAAAGGTGTTATTGGGAAACACGAGTAGAATGTTGTACTGCAGGAAATATATATTATGTACATTAA-----------------------------------------------------------------------AAAAAAAGT--------------------------------AGGC-AAAAATTGTTGGGTTGCAAGATGCAAACTTTTCATGAT---CAGGTATGGAAAAGCAAGATGCACT----GTCATGGAAACACTCATATGAAGT----TGTGGAATCCACGTA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               47247 1473 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=44519.000000
s hg38.chr14_KI270722v1_random     69454 28 +    194050 TTAATAGGAAAATAGTTAATACAGCCCA
s panTro4.chr3                 125159227 28 - 202329955 TTAATAGGAAAATAGTTAATACAGCCCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800315 28 - 202140232 TTAATATGAAAATAGTTAATACAGCCCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495914 28 -  28733288 TTAATAGGAAAACAGTTAATACAGCCCA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3404072 28 - 125196307 TTCATAGGAAAATAGTTAAAACAGCCAA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467384 28 - 155834243 TTAATAGGAAAATAGTTAATGCAGCCCA
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               48720 28 +    169463 TTAATAGGGAAATAGATAATTCAGCTCA
i tarSyr2.KE946707v1           I 1473 I 1716
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=108158.000000
s hg38.chr14_KI270722v1_random     69482 100 +    194050 GTATATTGCTATAACATTTATTTTAGTGAACTTATAATG----TTTCTTTGTATTAAATTATTAGATTATATATTTAGGTAA----TATTGTTGCTAAATTAGTAGGT
s panTro4.chr3                 125159255 100 - 202329955 GTATATTTCTATAACATTTATTTTAGTGAACTTATCATG----TTTCTTTGTATTAAATTATTAGATTATATCTTTAGGTAA----TATTGTTGCTAAATTAGTAGGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800343 100 - 202140232 GTATATTTCTATAACATTTATTTTAGTGAACTTATAATG----TTTCTTTGTATTAAATTATTAGATTATATCCTTAGGTAA----TATTGTTGCTAAATTAGTAGGt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27495942 100 -  28733288 ATATATTTCTATAACATTTATTTTAGTGAACTTATAATG----TTTCTTTGTATTAAATTATTAGATTATATCTTTAGGTAA----TATTGTTGCTAAATTAGTAGGT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3404100 105 - 125196307 GTATATGTCTATGATGTTAATTTTAGTGGAGATATAATGTCAATTTCTTTGGTTTAAATTATTACATTATGTCTTTAGGTAACATTCATTGGTGTTAAATTAGTA---
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467412 100 - 155834243 GTATACTTCTATAACATTTGTTTTTGTGAACTTATAATG----TTTCTTTGTATTAAATTATTAGATTATATCTTTAGGTAA----TACTGTTGTTAAATCAGCAGGT
i calJac3.chr7                 C 0 I 309
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               48748 1716 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=559.000000
s hg38.chr14_KI270722v1_random     69582 5 +    194050 A--ATAC
s panTro4.chr3                 125159355 5 - 202329955 A--ATAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800443 5 - 202140232 a--atat
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27496042 7 -  28733288 AATATAT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3404205 4 - 125196307 ---AAGT
i papAnu2.chr9                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120467512 309 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               48748 1716 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=64073.000000
s hg38.chr14_KI270722v1_random     69587 79 +    194050 ATAGTTTTATT----CAAAAATAAATTGTGCATCTAATGTCTACCAGTTAATGTACTTGTAGATGTA---TCTCATCTTAACTTGA
s panTro4.chr3                 125159360 73 - 202329955 ATATTTTTATT----C-AAAATAAATTGTGCATCTAATGTCTACCAATTAATGTACTTGTAGATGTA---TCTTAT-----CTTGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800448 79 - 202140232 atatttttatt----caaaaataaattGTGCATCTAATGTCTACCAATTAATGTACTTGTAGATGTA---TCTTATCTTAACTTGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27496049 69 -  28733288 ATATTTTTATT----CAAAAATAAATTGTGCATCTAATGTCTACCAATTAGTGTACTTGTAGATGTA---T----------CTTGA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3404209 77 - 125196307 ATATTATCATTaacccaaaaataaaatatatatctaatgtCAACTAATTAATATACTGGCAGATGCA---TTTTT------AATGG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120467821 82 - 155834243 ATATTTCGATT----CAAAAATAAATTGTGCATCTGATGTCTACCAGTTAATATCCTTGTAGCTGTAACTTTTTAttttattttaa
i calJac3.chr7                 I 309 I 450
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               48748 1716 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=216011.000000
s hg38.chr14_KI270722v1_random     69666 210 +    194050 GTCTTTCTTGCCCCTAA--TGGGGCGTGAAGGACTCTTCTCCCATGGGGAAGTT-----------------------------TTTCTTTTTCAGGAGGGAGGAGGGCTTTCCCAGGTAATGTGTCTAGAGTGTTGGGCAGAAGAATATTGGACCACACCACACCAGTTCTCTCCTTAATCCACGTCATTTGTCTTCTCTCCCAGCTATGTTTCCAGTGTCCTGTGGGTGTTTCCAAGAGC
s panTro4.chr3                 125159433 210 - 202329955 GTCTTTGCTGCCCCTAA--TGAGGCTTGAAGGACTCTTCTCCCATGGGAAAGTT-----------------------------TTTCTTTTTCAGGAGGGAGGAGGGCTTTTCCAGGTAATGTGTCTAGAGTGTTGGGCAGAAGAATCTGGGACCACACCACACCAGTTCTCTCCTTAATTCACGTCATTTGCCTTCTCTCCCAGCTATGTTTCCAGTGTCCTCTGGGTGTTTCCAAGAGC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800527 210 - 202140232 GTCTTTGCTGCCCCTAA--TGAGGCGTGAAGGACTCTTCTCCCACGGGGAAGTT-----------------------------TTTCTTTTTCAGGAGGTAGGAGGGCTTTTCCAGGTAATGTGTCTAGAGTGTTGGGCAGAAGAATCTGGGACCACACCACACCAGTTCTCTCCTTAATCCACGTCATTTGCCTTCTCTCCCAGCTATGTTTCCAGTGTCCTCTGGGTGTTTTCAAGAGC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27496118 210 -  28733288 GTCTTTGCTGCCCCTAA--TGAGGCGTGAAGGACTCCTCTCCCACGGGGAAGTT-----------------------------TTTCTTTTTCAGGAGGGAGGAGGGCTTTTCCAGGTAATGTGTCTAGAGTGTTGGGCGGAAGAATCTGGGACCACACCACACCAGTTCTCTCCTTAATCCACGTCATTTGCCTTCTCTCCCAGCTATGTTTCCAGTGTCCTCTAGGTGTTTCCAAGAGC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3404286 234 - 125196307 ATCTTAGTTTCCGCTTATTTGAGGTGTGGAGGACTAATCTCTCCTAAGGATGTtcctgtttgtgttttttgttgatgtggttgtttctttttggggagGGA--AGTCATTTTCCAGCTAATTTGTATAGCGTTTTGGACACAAGAATGTAGGACCAAGCCACACCAGTTCTCTCCTTAATCCACTACATTTACCTTCTCTCTCAGCCATGTTTCCAGAGTCT-----GTCttgccaagacc
i papAnu2.chr9                 C 0 I 7364
s calJac3.chr7                 120468353 202 - 155834243 GTCTTTGTTGCCCCTAA--TGAGGCGTAAAGGACTATTCTCCCACTGGGAAGTT-----------------------------TTTTCTT---AGGAGGGAGGAGGTCTTTTCCAGGTAATGTGTCTGGAGTGTGGGGCAGAAGAATCTGGGACCATACCAT-----TTCTCTCCTTAATCCGCGTCATTTGCCTTCTCTCCCAGCTGTGTTTCCAGTGTCCTCTGGGTGTTTCCAAGAGC
i calJac3.chr7                 I 450 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               48748 1716 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=190806.000000
s hg38.chr14_KI270722v1_random     69876 197 +    194050 AATAAGAAACGAATAAATCTCTGGTGAGTTG--------TTTATTTGTTCTTCACTTTGTTTTACACTGTATTTTCTGAGTTTATGGGTGTCTGTGAATTAAAAAGGaaaagtagaaataagtaaaattcagcttgaagaaaatatac---ataaa-taagttaaagctgacctgtagatacaggcaggttat-aagagcttagagtt---gt
s panTro4.chr3                 125159643 198 - 202329955 TACAAGAAACGAATAAATCTCTGGTGAGTTG--------TTTATTTTTTCTTCACTTTGTTTTACACTGTGTTTTCTGAGTTTATGGGTGTCTGTGAATTAAAAAGGAAAAGTGGAAATAAGTAAAACTCAGGTTGAAGGAAATATAC---ATAAATTAAGATAAAGCTGACCTGTAGATATAGACAGGTTAT-AAGAGCTTAGAGTT---GT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800737 197 - 202140232 AACAAGAAATGAATAAATCTCTGGTGAGTTG--------TTTATGTGTTCTTCACTTTGTTTTACACTGTATTTTCTGAGTTTGTGGGTGTCTGTGAATTAAAAGGGAAAAGTAGAAATAAGTAAAACTCAGCTTGAAGGAAATATAC---ATAAA-TAAGATAAAGCTGACCTGTAGATataggcaggttat-aagagcttagagtt---gt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27496328 197 -  28733288 AACAAGAAACGAAAAAATCTCTGGTGAGTTG--------TTTATTTGTTCTTCACTTTGTTTTACACTGTATTTTCTGAGTTTATGGGTGTCTGTGAATTAAAAAGGAAAAGTAGAAATAAGTGAAACTCAGCTTGAAGGAAATATAC---ATAAA-TAGGATAAAGCTGACCTGTAGATataggcaggttat-aagagcttagagtt---gt
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3411884 189 - 125196307 aacaaaaaat---taaacacccAGTGAGTGgaggttttttttatttatccCTCACTTTCTTTTACATTGTGT--------------------TATGAATTTCAgtggaaaagtagaaaaaagtaaagcaaaacttaagggaaatggacataataaa-taagataaaaataacctataaaCATGGGCAGATTGTGAAGACCTTAGAGTTTTCGT
i papAnu2.chr9                 I 7364 C 0
s calJac3.chr7                 120468555 196 - 155834243 AACAAAAAGTGCATAAATCTCTGGTGAGTTG--------TCTATTTGTTCTTCACTTTGTTTTACGTTGTATTTTCTGAATTTATGGG-GTATGTGAATTAAAATGGGAAAGTGGAAATAAGTGAAACTCAGCTTGAAGGAAGTGTAC---ATAAA-TAAGGTAAAGCTGACCTGTAGTTataggcagattat-aagtgcttagagtt---gt
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               48748 1716 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=4011.000000
s hg38.chr14_KI270722v1_random     70073 2 +    194050 ct
s panTro4.chr3                 125159841 2 - 202329955 CT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800934 2 - 202140232 ct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27496525 2 -  28733288 ct
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412073 2 - 125196307 CT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120468751 2 - 155834243 ct
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               50464 2 +    169463 ct
i tarSyr2.KE946707v1           I 1716 I 473
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=213720.000000
s hg38.chr14_KI270722v1_random     70075 217 +    194050 aagttgagtgcaaattttcctctgaactttctgatgccgagacaaaaaaggcagtcatgtttgttatgtgattggaatggaacccgagaagagagcatgctgtgttcttgtgggacaggaaagcttatgtgcact-aagtctgaaccaccaccttcattggtgacatagattatgtgctggaacatatttca-caccaggctggca-gtaaacacttgta
s panTro4.chr3                 125159843 217 - 202329955 AAGTTGAGTGCAAATTTTCCTCTGATCTTTCTGATGCAGTGACAAAAAAGGCAGTCATGGTTGTTACGTGATTGGAATGGAACCCGAGAAGAGAGCATGCTGTGTTCTTGTGGGACAGGAAAGCTTGCGTGCACC-AAGTCTGAACCACCACCTTCAGTGGTGACATAGGTTATGTGCTGGAACATATTTCA-CACCGGCCTGGCA-GTAAATACTTGTA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159800936 217 - 202140232 aaattgagtgcaaattttcctttgatctttctgatgctgcgacaaaaaaggcagtcatgtttgttacgtgattggaatggaacccgagaagagagcatgctgtgttcttgtgggacaggaaagcttGTGTGCACC-AAGTCTGAACCACCACCTTCATTGGTGACATAGATTATGTGCTGGAACATATTTCA-CAGCGGCCTGGCA-GTAAACACTTTTA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27496527 217 -  28733288 aagttgagtgcaaattttcctttgatctttctgatgctgcgacaaaaaaggcagtcatgtttgttacgtgattggaatggaacccgagaaaagagcatgccgtgttcttgtgggacaggaaagcttGCGTGCACC-AAGTCTGAACCACCACCTTCATTGGTGACATCGATTATGTGCTGGAACATATTTCA-CACCGGCCTGGCA-GTAAACACTTGTA
i nomLeu3.chr24                C 0 I 336
s papAnu2.chr9                   3412075 219 - 125196307 AAATTGAGTACAAATCTGTCTCTGATTTTTATGATGCCGTGGT-AAAAAGGCAGTCACGTTTGTTGCATGATTGGAATGGAACCTAAGAAGAGACCGTGCTACATTCTCGTGAGACATGAAGACTTGCTGACACCAAAGTCTGAAACACTGACTTCATTAGTCACGTAGATGATGTTGTGGAAACTTTCTCACCACCAACCTGGAAGGTAAACGCTTTTC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120468753 212 - 155834243 tcgttgagtacatatttttctctggtctttctgatgccatggcaaaaa--gCAGTCATG--TATTACATGATTGGAGTGGAACCTGAGAAGAGAGCATGCTGCGTTCTCGTGGGACAGGAGAACTGGC-TGTACC-AAGTCTGAACCAGCACCTTCTTTCGTGACACAGATTATGTGGTGGGGCATATTTCACCACCAACCTGGCA-GTAAACACTTTA-
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               50466 473 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=38841.000000
s hg38.chr14_KI270722v1_random     70292 38 +    194050 gtgttgtgtagtggaaatggtcatctgccgctaaagca
s panTro4.chr3                 125160060 38 - 202329955 GTGTTGTGCAGTGGAAACGGTCATCTTCCGCTAAAGCA
i panTro4.chr3                 C 0 I 238
s ponAbe2.chr3                 159801153 38 - 202140232 GTGTTGTGCAGTGGAAATGGTCATCTGCTGCTAAAGCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497080 38 -  28733288 GTGTTGTGTAGTGGAAATGGTCATCTTCCGCTAAAGCA
i nomLeu3.chr24                I 336 C 0
s papAnu2.chr9                   3412294 38 - 125196307 ACGTTCTGCAGTGGAAATGGTTCCCTGGCACTAAACCA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120468965 38 - 155834243 ATGTTGTGTAGTGGAAGTGGTCACCTACTGCTGCAGCA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               50466 473 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=3710.000000
s hg38.chr14_KI270722v1_random     70330 3 +    194050 cag
s panTro4.chr3                 125160336 3 - 202329955 CAG
i panTro4.chr3                 I 238 C 0
s ponAbe2.chr3                 159801191 3 - 202140232 CAG
i ponAbe2.chr3                 C 0 I 168
s nomLeu3.chr24                 27497118 3 -  28733288 CAG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412332 3 - 125196307 CAA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120469003 3 - 155834243 CAG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               50466 473 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=220177.000000
s hg38.chr14_KI270722v1_random     70333 229 +    194050 cttccatcgtaaagtatgctcc----ttgctcaaagagtgtggtcccaaacagcttttggggggtcctccttgattcatggatgaaacctggaacatcttgaggattgagttaaccataggtccttaaataactctccacacctttttcttagtttatctctacatgcagggtgtgaagcagcctgttcaaagtcatat-tttctgggaaATATTTCCAGTGTTTATTTGCACT
s panTro4.chr3                 125160339 229 - 202329955 CTTCCATCGTAAGGTATGCTCC----TTgctcaaagagtgtggtcccaaacagcttttgggaggtcctccttgattcatggatgaaacccggaacatcttgagaactgagttaaccacagatccttaaataactctccacacctttatcttagtttatctctacatgcagggtgtgcagcagcctgttcaaagtgatat-tttctgggaaATACTTCCAGTGTTTATTTGCACT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801362 229 - 202140232 CTTCTATCGTAAGGTATGCTCC----TTgctcaaagagtgtggtcctaaacagcttttgggaggtcctccttgattcatgcatgaaacccagaacatcttgaagactgagttaaccacaggtccttaaataactcttcacacctttttcttagtttatctctacgtgcaaggtgtgcagcggcctgttcaaagttatat-tttctgggaaatatttccagtgTTTATTTGCACT
i ponAbe2.chr3                 I 168 C 0
s nomLeu3.chr24                 27497121 229 -  28733288 CTACCATCGTAAGGTATGCTCC----TTgctcaaagagtgtggtcccaaacagcttttgggaggtcctccttgatgcatggatgaaacccggaacatcttgaggactgagttaaccacaggtccttaagtaactctccatacctttttcttagttcatctctacgtgcagggtgtgcagaagcctgttcatagttatat-tttctgggaaATATTTCCAGTATTTATTTGCACT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412335 217 - 125196307 CTTCCAGAATAAGGTAT-TTCTGGAGTTACTAAAATA-TGTTGTCTTAGACAG-GTTTGGAAGGTGAAACTTCATTCATAAGTAAAACCTGGAACATCTGGGGGACTGAGTCAAGCACAGACCCTTAAATAATTATCCATACCTTTCTCTCAGTTCTTCTATATCTACGAGGTATACAGCAGACTGGTCAAAGTTCTTTGTTTCTGGCACATATTCCCAG--------------
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120469006 227 - 155834243 CTTCCATGATAAGGGTTACTCC----TTGCTC--AGagtgtggtcccaaacagcttttgggaggctctccttgattcatggatgaaacttggaacatcttgcagattgagttgacagcaggttcttaagtaagtctccacgcatttttcttagtttatctctacatgcagggtgtgcaacagcctgttcaaagttacat-tttctgggaaatacTCCCAGTGTTTATTTGTACT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e tarSyr2.KE946707v1               50466 473 +    169463 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1705.000000
s hg38.chr14_KI270722v1_random     70562 2 +    194050 TT
s panTro4.chr3                 125160568 2 - 202329955 TT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801591 2 - 202140232 TT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497350 2 -  28733288 TT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120469233 2 - 155834243 TT
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               50939 2 +    169463 GT
i tarSyr2.KE946707v1           I 473 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1038504 29666 -   1077187 T
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412552 0 - 125196307 C
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=2692.000000
s hg38.chr14_KI270722v1_random     70564 2 +    194050 AG
s panTro4.chr3                 125160570 2 - 202329955 AG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801593 2 - 202140232 AG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497352 2 -  28733288 AG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120469235 2 - 155834243 AG
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE946707v1               50941 2 +    169463 AA
i tarSyr2.KE946707v1           C 0 N 0
s otoGar3.GL873804               1008838 2 -   1077187 AA
i otoGar3.GL873804             T 29666 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412552 0 - 125196307 C
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=3000.000000
s hg38.chr14_KI270722v1_random     70566 2 +    194050 CC
s panTro4.chr3                 125160572 2 - 202329955 CC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801595 2 - 202140232 CC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497354 2 -  28733288 CC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120469237 2 - 155834243 CC
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1008840 2 -   1077187 CC
i otoGar3.GL873804             C 0 I 78
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412552 0 - 125196307 C
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=60924.000000
s hg38.chr14_KI270722v1_random     70568 62 +    194050 CACTCGGTGTAGTC-----TTATTTCTTCT-AAACTCACCATTAACCTAAATAATAGTCAAATTTA-GG
s panTro4.chr3                 125160574 68 - 202329955 CACTCTGTGTAGTCCTAACTTATTTCTTCT-AAACTCACCATTAACCTAAATAATAGTCAAATTTAGGG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801597 68 - 202140232 CACTCTGTGTAGTCTTAACTTATTTCTTCT-AAACTCACCATTAACCTAAATAATAGTCAAATTTAGGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497356 68 -  28733288 CACTCTGTGTAGTCTTGACTTATTTCTTCT-AAACTCACCATTAATCTAAATAATAGTCAAATTTAGGG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412552 65 - 125196307 --CACAATGTAGTCTTAATGCATTTTTTCTAAAACTCACCAATAACCTAAATTATAGTAAAATGCA--A
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120469239 61 - 155834243 CACTCTATGTAGTC-----TTACTTCTTCT-GCACTCACCATTAACCTAAATAATAGTCAAATTTA--G
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008842 78 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-1099.000000
s hg38.chr14_KI270722v1_random     70630 2 +    194050 -GG
s panTro4.chr3                 125160642 2 - 202329955 -GG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801665 2 - 202140232 -GG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497424 2 -  28733288 -GA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412617 2 - 125196307 -TG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120469300 2 - 155834243 -GG
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1008920 2 -   1077187 TG-
i otoGar3.GL873804             I 78 I 640
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=37628.000000
s hg38.chr14_KI270722v1_random     70632 39 +    194050 ACT--------GTATTTGCCTTGTTCGAGTCTTCTACCATAGTTGAA
s panTro4.chr3                 125160644 39 - 202329955 ACT--------GTGTTTGCCTTACTCGAGTCTTCTACCATAGTTGAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801667 39 - 202140232 ACT--------GTATTTGCCTTACTCGAGTCTTCTACCATAGTTGAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497426 39 -  28733288 ACT--------GTATTTGCCTTACTCGAGTCTTCTACCGTAGTTGAA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412619 47 - 125196307 ACTATTATCTAGTCTTTGCCTAACTTGAAACTTTTGCCATATTTGAA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120469302 47 - 155834243 AGTGTTCTCTAATGTTTGCCTTACTCAAATCTTCTACTATAGTTGAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=4334.000000
s hg38.chr14_KI270722v1_random     70671 8 +    194050 ACtgtcgt
s panTro4.chr3                 125160683 8 - 202329955 ACtgtcgt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801706 8 - 202140232 ACTCTCGT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497465 8 -  28733288 ACtgtcat
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412666 8 - 125196307 ACCACTGT
i papAnu2.chr9                 C 0 I 22
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469349 0 - 155834243 C
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=303228.000000
s hg38.chr14_KI270722v1_random     70679 603 +    194050  
s panTro4.chr3                 125160691 601 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159801714 602 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27497473 601 -  28733288  
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469349   0 - 155834243 C
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674  22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=137861.000000
s hg38.chr14_KI270722v1_random     71282 180 +    194050 ACATCTGTTCATGAT---CTGGAAATTCTTCTGTGTTAGTTCtgttaaaagcaaaactttaaaagagtttaattgagcaataaacaattcacgaatcggacagtccccagaatcacagcagattcacagagactccagcgcagtcatgtggtggaagaagatttatagacaaaagggaagagg
s panTro4.chr3                 125161292 180 - 202329955 ATGTCTGTTCATGAT---CTGGAAATTCTTCTGTGTTAGTTCtgttaaaagaaaaactttaaaggagtttagttgagcaataaacgattcatgaatcggagagtccccagaaacacagcagattcacagagactccagcacagtcatgtggtggaagaagatttatagacaaaagggaagtgg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159802316 180 - 202140232 ATGTCTGTTCATGAT---CTGGAAATTCTTCTGTGTTAGTTCtgttaaaagaaaaactttacaggagtttaattgagcaataaatgattcatgaattggacagtccccagaatcacagcagattcacagagactccatcacagtcatgtggtggaagaagatttataggcaaaagggaagtgg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27498074 176 -  28733288 ACGTCTGTTCATGAT---CTGGAAATTCTTGTAT----GTTCtgttaaaagaaaaactttaaaggagtttaatagagcaataaacagttcatgaatcgcacagtccccagaatcacagcagattcacagagactccagcgcagtcatgtggtgtaagaagatttatagacaaaagggaagtgg
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120469349 182 - 155834243 ATGTCTGTTTATGATCTCCTGAAAATTCTTCTGTGTTAGTTCtgttaaaagaaaaactttaaaggggtttaattgagcaataaatgattcacaaatcggacagcccccagaatcacagcaga-tcagagagactccagtccagtcgtgtggtggagaaagatttatagacaaaaaaaaaaagg
i calJac3.chr7                 C 0 I 5348
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674  22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=540249.000000
s hg38.chr14_KI270722v1_random     71462 1122 +    194050  
s panTro4.chr3                 125161472 1116 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159802496 1125 - 202140232  
i ponAbe2.chr3                 C 0 I 4451
s nomLeu3.chr24                 27498250 1109 -  28733288  
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469531 5348 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922  640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674   22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=82254.000000
s hg38.chr14_KI270722v1_random     72584 437 +    194050 ttgttttagcacgtcactcccattgttttgggttccagtttaaacacatcacttccattgttttcatttcctgttttagcacgtcacacccattgttttaggttctggtttaagcacatcactcccattgttttcatttccggttttagcacgtcactcccattgttttgggtttctggtttagcagggcactcccattgttttgggttctgattttagcacatcactcccattgttttgggttccggttttagcaagacactcccattgttttgggtttctggtttagcacgtcactcctattgttttgggttctggttttagtgcacgtcactcccattgttttgggttccagttttactacatcactcccattgttttgggtttctggtttagcatgtcactcccattgttttgggtttccggtttagcatgtc
s panTro4.chr3                 125162588 397 - 202329955 CGGTTTTAGCACGTCACTCCCATTGTTTTGGGTTC-----------------------TG------------GTTTTAGCATGTCACTCCCATTGTTTTGGGTTCTGGTTT-AGCACATCTCTCCCATTGTTTTGGGTTCCGGTTTTAGCATGTCACTCCCATTGTTTTGGGTTTCTGGTTTAGCAGGACACTCCCATTGTTTTGGGTTCTGGTGTTCGCACGTCACTCCCATTGTTTTGGGTTCCGGTTTTAGCACATCACTCCCATTGTTTTGGGTTTCTGGTTTAGCACGACACTCCCATGGTTTTGGGTTCCGGTTTTA--GCACGTCACTCCCATTGCTTTGGGTTCTGG-TTTAGCACATCTCTCCCATGGTTTTGGGTTCCGGTTTTAGCATGTCACTCCCATTGCTTTGGG-TTCTGGTTTAGCACGTC
i panTro4.chr3                 C 0 I 5096
s nomLeu3.chr24                 27499359 427 -  28733288 CTGGTGTAGCACGTCACTCCCATTGTTTCGGGTTC-TGGTTTAGCACATCACTCCCACTGTTTTCGGTTCCAGTTTTGGCACATCGCTCCCATTGTTTCGGGTTCTGGTTT-AGCACGTCACTCCCATTGTTTCGGGTTCCGG-TTTAGCACGTCACTTCTATTGTTTCGGGTTCTGGTTTTAGCACGTCACTCCCATTGTTTCGGGTTCCGGTTTTAGCACGTCACTCCCATTGTTTCGGGTTCCGG-TTTAGCACGTCACTCTCATTGTTTTGGG-TTCCGGTTTAGCCCGTCACTCCCATTGTTTCGGGTTCCGGTTTTA--GCACGTCACTCCCATTGTTTTGGGTTCCGG-TTTAGCACGTCACTCCCATTGTTTCGGGTTAC-GGTTTAGCACGTCACTCCTATTGTTTCAGG-TTCTGGTTTAGCCCGTC
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469531 5348 - 155834243 I
e ponAbe2.chr3                 159803621 4451 - 202140232 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674  22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=282.000000
s hg38.chr14_KI270722v1_random     73021 3 +    194050 act
s nomLeu3.chr24                 27499786 3 -  28733288 ACT
i nomLeu3.chr24                C 0 I 4740
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469531 5348 - 155834243 I
e ponAbe2.chr3                 159803621 4451 - 202140232 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e panTro4.chr3                 125162985 5096 - 202329955 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674 22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=0.000000
s hg38.chr14_KI270722v1_random     73024 9520 +    194050  
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469531 5348 - 155834243 I
e ponAbe2.chr3                 159803621 4451 - 202140232 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922  640 -   1077187 I
e panTro4.chr3                 125162985 5096 - 202329955 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674   22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27499789 4740 -  28733288 I

a score=103843.000000
s hg38.chr14_KI270722v1_random     82544 421 +    194050 cattattttttaatattatctgaaaatcttctttaaagagagaaagccaaatgtcacccactttttcataaaaccttataggcaaatctatTAtt--------tttttttgaggtggattttccctcttgttgcccaggctggagtgcaatggtgtgatctcggtccactgcaaccccctgcctcccaggttcaagtgattctcctgccccagcctcctgagtagctgggattagaggcaagccccaccatgctcagctaattttgtgtttttagtagacacggggtttttccttgttggtcaggctggccctgaattcctgacctcaggagatccacctgtctcggcctccccaagtgttgggattacaggcatgagccactgcctctggccATTTTTTTTTT--AAAGATAGCGTCTTGCTCTGTCacc
s panTro4.chr3                 125168081 431 - 202329955 cattattttttaatattacctgaaaatcttctttaaagagagaaagccaaatgtcacccaatttttcataaaaccttatagacaaatctatTAttcttttttttttttttgagatggattttccctcttgttgcccaggctggagtgcaatggtgtgatctcagttcactgcaaccccctgcctcccgggttcaagagattctcccgccccagcctcctgagtagctgggattagaggcatgcgccaccatgcccagctaattttgtgtttttagtagagacggggtttttccttgttggtcaggctggccctgaactcctgacctcaggtgatccacctgcctcagcctccccaagtgttgggattacaggcatgagccactgcgcctgcccAttttttttttttaaagatagcgtcttgctctgtcgcc
i panTro4.chr3                 I 5096 C 0
s nomLeu3.chr24                 27504529 428 -  28733288 cattattttttaatattacctgaaaatcttctttaaagagagaaagctgaatgtcatccaatttttcataaaaccttatagacaaatctattattattatt--attttttgagatggattttccctcttgttgtccaggctggagtgcaatggtgcgaccgcggttcactgcaaccccctgcctctcgggttcaagtgattctcctgccccagcctcctgagcagctgggattagaggcctgtg-caccacgcccagctaattttgtgtttttagtagacacggtgtttttccttgttggtcaggctgaccccgaactcctgacctcaggtgatccacctgcctcggcctccccaagtgttgggattacaggtgtgagccactgcgcccagccATTTTTTTTTTTTAAAGACAGTGTCTTGCTCTGTCGCC
i nomLeu3.chr24                I 4740 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469531 5348 - 155834243 I
e ponAbe2.chr3                 159803621 4451 - 202140232 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674  22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=9219.000000
s hg38.chr14_KI270722v1_random     82965 18 +    194050 ctcctcaccacattatag
s panTro4.chr3                 125168512 18 - 202329955 cTCctcaccacattatag
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159808072 18 - 202140232 CTCctcaccacactatag
i ponAbe2.chr3                 I 4451 C 0
s nomLeu3.chr24                 27504957 18 -  28733288 GTCctcaccacattatag
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120469531 5348 - 155834243 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674 22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1018231.000000
s hg38.chr14_KI270722v1_random     82983 1340 +    194050  
s panTro4.chr3                 125168530 1315 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159808090 1319 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27504975 1313 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120474879 1280 - 155834243  
i calJac3.chr7                 I 5348 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19637928 10407 -  19803153 I
e otoGar3.GL873804               1008922  640 -   1077187 I
e gorGor3.chr3                 122193145 14325 - 199944510 I
e papAnu2.chr9                   3412674   22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=13050.000000
s hg38.chr14_KI270722v1_random     84323 12 +    194050 tcttctcttctt
s panTro4.chr3                 125169845 12 - 202329955 ttttctcttctt
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19648335 12 -  19803153 ttttctcttctt
i panPan1.JH650580             I 10407 I 3942
s gorGor3.chr3                 122207470 12 - 199944510 tcttctcttctt
i gorGor3.chr3                 I 14325 C 0
s nomLeu3.chr24                 27506288 12 -  28733288 tcttctcttctt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120476159  8 - 155834243 ----ctcttctc
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e ponAbe2.chr3                 159809409  0 - 202140232 C
e otoGar3.GL873804               1008922 640 -   1077187 I
e papAnu2.chr9                   3412674 22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=2119.000000
s hg38.chr14_KI270722v1_random     84335 3 +    194050 ctt
s panTro4.chr3                 125169857 3 - 202329955 ctt
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122207482 3 - 199944510 ctt
i gorGor3.chr3                 C 0 I 4185
s ponAbe2.chr3                 159809409 1 - 202140232 --t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27506300 3 -  28733288 ctt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120476167 3 - 155834243 att
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e papAnu2.chr9                   3412674 22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1037081.000000
s hg38.chr14_KI270722v1_random     84338 1374 +    194050  
s panTro4.chr3                 125169860 1405 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159809410 1479 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27506303 1397 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120476170 1347 - 155834243  
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1008922  640 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3412674   22 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=155781.000000
s hg38.chr14_KI270722v1_random     85712 162 +    194050 ctgtaataGTTCCTATTATGACCTCACTGACAGTT------CTTTTTCTCTGAATTCTC---CTTTCTTCTCAACAGTTTATCC-----AAATGTTCCGTTGG--TCGCTGTTCATCCCGCCCTGCAGTTCTCCTAGACTGATTCAACCCTTTGTGGTTT-GCCGTCCTGTTTCTCTAC
s panTro4.chr3                 125171265 162 - 202329955 ctgtaacaGTTCCTATTATGACCTCACTGACAGTT------CTTTTTCTCTGAATTCTC---CTTTCTTCTCAACAGCTTATCC-----AAATGTTCTGTTGG--TCCCTGTTCATCCCACCCTGCAGTTCTCCTTGACTGATTCAGCCCTTTGTGGTTT-GCAGTCCTGTTTCTCTAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159810889 163 - 202140232 ctgtaacaGTTCCTATTATGACCTGACTGACAGTTC-----CTTTTTCTCTGAATTCTC---CTTTCTTCTCAACAGCTTATCC-----AAATGTTCCATCGG--TCCCTGTTCATCCCACCCTGCAGTTCTCCTTGACTGATTCAGCCCTTTGTGGTTT-GCAGTCCTGTTTCtctac
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27507700 162 -  28733288 ctgtaacaGTTCCTATTATGACCTCACTGACAGTT------CTTTTTCTCTGAATTCTC---CTTTCTTCTCAACAGCTTATCC-----AAATGTTCCGTCGG--TCCCTGTTCATCCCGCCCTGCAGTTCTCTTTGACTGATTCAGCCCTTTGTAGTTT-GCAGTCCTGTTTCTCTAC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412696 177 - 125196307 CTGTGTTCGTTTATATCATGGGCTCACTGattgttccttctctttttccctgaattcttctactttcttctcCGTAATGTACCTCATAGAAGTGTACAATCGGATTTCCCACCCATCCCACTCTACAGTTCTCCT-GTCTGACTCAG-CCTCTGTGATTTGGCAGTCCTGTTTCTCTCC
i papAnu2.chr9                 I 22 C 0
s calJac3.chr7                 120477517 163 - 155834243 ctttaataGTTCCTCTTGTGACCTCACTGACAGTTC-----CCTTTTCTCTGAATTATT---C-TACTTCTCAACAACTTACCC-----AAATGTTCCATCAG--TCCCTGTTCATCCGACTCTGCAGTTTTCCTTGACTGATTCAGCCCTTCATGGTCTGGCAGTCCCATTTCTCTGC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1008922 640 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=20626.000000
s hg38.chr14_KI270722v1_random     85874 23 +    194050 AGCTTGGACCTCTT----ATTCTTTCC
s panTro4.chr3                 125171427 24 - 202329955 AGCTTAGACCTCTT---TAGTCTTTCC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811052 24 - 202140232 agcttggacctctt---cagtctttcc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27507862 24 -  28733288 AGCTTGGACCTCTT---CAGTCTTTCC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412873 27 - 125196307 AGCTTTGATGTCTTCCCCAGCCTTTAG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120477680 27 - 155834243 AGCTAGGACCTCTTCCTCAGTCCTTTG
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1009562 21 -   1077187 ------GGCTTCTTCCCCAGGCTTTTG
i otoGar3.GL873804             I 640 I 74
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=73507.000000
s hg38.chr14_KI270722v1_random     85897 76 +    194050 ATCATAGGTTTAACACTCTGTTGAATGCTTCTTTGTAGCTATCCAAAATTTACCTTAAGCTCAAAAAATTCAAAGT
s panTro4.chr3                 125171451 76 - 202329955 ATCATAGGTTTAACTCTCTGTTGAATGCCTTTTTGTTGCTATCCAAAAGTTACCTTAAGCTCAAAAAATTCAAAGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811076 76 - 202140232 atcgtaggtttaactgtctgttgaatgcttctttgtagctatccaaaagttaccttaaactcaaaaaattcaaagt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27507886 76 -  28733288 ATCATAGGTTTAACTCTCTGTTGAATGCTTCTTTGTAGCTATCCAAAAGTTACCTTAAGCTCAAAAAATTCAAAGT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412900 76 - 125196307 AGCACACGGTCAACTCCCTATTAAATGCTTCTTTGTAGCTATCCAAAAGACACCTCAAGACCAACAAATCCAACAT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120477707 62 - 155834243 ATCATATGTTTAACTG--------------CTTTGTAGCTATCCAAAAGTTACCTTAAGCTCAAAACATCCAAAGT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1009583 74 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=2100.000000
s hg38.chr14_KI270722v1_random     85973 1 +    194050 G
s panTro4.chr3                 125171527 1 - 202329955 G
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811152 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27507962 1 -  28733288 G
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412976 1 - 125196307 G
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120477769 1 - 155834243 G
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1009657 1 -   1077187 G
i otoGar3.GL873804             I 74 I 25
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=29856.000000
s hg38.chr14_KI270722v1_random     85974 32 +    194050 AAAGCCACATCCTTCTCTCTTCCCTTCTGTGT
s panTro4.chr3                 125171528 32 - 202329955 AAAGCCATATCCTCCTCTCTTCCCTTATGTGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811153 32 - 202140232 aaagccacatcctcctcTCTTCCCTTATTTGT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27507963 32 -  28733288 AAAGCCACATCCTCCTCTTTTTCCTTATGTGT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3412977 28 - 125196307 AAAACCA---CCTCCATTATTCCCTTATCTG-
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120477770 32 - 155834243 AAAGCCACATTCTCCTCTCTTCCCTTATGTGT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1009658 25 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=134332.000000
s hg38.chr14_KI270722v1_random     86006 111 +    194050 ATGGTATTACTACCATG-AGCCAGTGAC--------CCA--------AAATAGGATTTCTTCTGGGCTTTTCTTGCTTATATTCAGGCTCATCTGGTGTCAAGCCTTGTTACTTTTGTTTCtttgttc
s panTro4.chr3                 125171560 112 - 202329955 ATGGTATTACTACCATGCAGCCAGTGAC--------CCA--------AAATGGGATTTCTTCTGGGCTTTTCTTGCTTAGATTCAGGCTCATCTGGTGTCAAGCCCTGTTACTTTTGTTTGGTTGttc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811185 112 - 202140232 ATGGTATTACTACTTTGCAGCCAGTGAC--------CCA--------AAATAGGATTTCTTCTGGGCTTTTCTTGCTTAGATCCAGGCTAATCTGGTGTCAAGTCCTGTTACTTTTGTTTGCTTGttc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27507995 112 -  28733288 ATGGCATTACTACTGTGCAGCCAGTGAA--------CCA--------AAATGGGATTTCTTCTGGGCTTTTCTTGCTTAAATCCAGGCTCATCTGGTGTCAAGTCCTGTTACTTTTGTTTGCTTGttc
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413005 111 - 125196307 -TGGTATTATGACCTTACAGCCAGTGAC--------CCA--------AACCCCTATTCCTCCTGAAATCCTCTCTCTTAGGTCTTACCTCATCTAGTGTCAACTCCTGCTACTTATGTTTAtttgttc
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120477802 120 - 155834243 ATGGTATTACTACCATCCAGCCAGTGATTCAAACCACTA--------AAATGGGGTTTCTTCTGGACTTTTCTTGCTTAGATTCAGCCTCATCTGGTGTCAAGAACTGTTACTTTTGTTTGCTTGttc
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1009683 120 -   1077187 ATAGTATAACTCCCACTCTGCCAGCTAC--------CCGACTGATCCAAGTGGAGTTGTTTCTGGCCTCCTGTCTCTCAGGTCTAACCTCATCTATTGTCAACTCCTGCTACTTTTGTTGACTTATTT
i otoGar3.GL873804             I 25 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=8942.000000
s hg38.chr14_KI270722v1_random     86117 17 +    194050 --ttttatttttaattttt
s panTro4.chr3                 125171672 17 - 202329955 --ttttattttcaattttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811297 17 - 202140232 --ttttatttttaattttt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27508107 17 -  28733288 --tttaatttttattttat
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120477922 16 - 155834243 ---tttattttgtttttgt
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1009803 19 -   1077187 TCATTTTCTTCTAATATCT
i otoGar3.GL873804             C 0 I 43
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3413116  0 - 125196307 C
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=226047.000000
s hg38.chr14_KI270722v1_random     86134 297 +    194050 ttt-cttttgagacaaagtttcactcttgttgcccaggctagagctcagtggtgtgatctcagctcactgcaggcttcacctcccagattcaagcaattctcctgcctcag-ctcctgagtagctggtattacaggcatttgccaccacgcccggctaattttgtatttttagtagagatgggattta-ctgtttcgatcagggtggtctcgaactccctacctcaggtgatctgcccgcctcggcctaccaaagtgctgggattacaggcatgagccaccgtgcctggccTGCTTGTTG
s panTro4.chr3                 125171689 300 - 202329955 ttttcttttgagacagagtttcgctcttgttgcccatgctggagtgcagtggtgcgatcttggctcaccgcagcctccacctcccaggttcaagcaattctcctgcctcagtctcctgagtagctggtattacaggcatgtgccaccacgcccggctaattttgtatttttagtagagatggggtttctccgttttgatcagggtggtctcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccggccTGCTTCTTG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811314 299 - 202140232 ttt-cttttgagacagagttgcgctctcgttgcccaggctggaatgcagtggtgcgatctcagctcaccgcagcctccgcttcctgggttcaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgtgccaccacgcctggctaattttgtatttttagtagagatggggtttctccgtgttggtcagggtggtctcgaactcccgacctcaggtgatctccccgcctcagcttcccaaagtgctgggattacaggcatgaaccactgtgcccggccTGCTTGTTC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27508124 300 -  28733288 ttttcttttgagacagaattttgctcttgttgcccaggctggagcgcagtggtgcaatctcggctcgctgcagcctccgcctcccagattcaagcaattctcctgcctcagcctcctgagtagctggtattacaggcatgtgccaccatgcctggttaattttgtatttttagtagagatgggatttctccttgttgatcagggtggtctcgaattcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcctggccTGCTTATTG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120477938 299 - 155834243 ttt-tttttgagacagggtttcgctcttgtcacccagcctggactgcaatggcgcgatcttggctcactgcagcctccacctcctgggttcaagcagttctcctccctcagcctcccgaatagctggaattacaggcatgcgccaccgtgcccagctgattttgtatttttagtaaaaacagggtttctccatgttgatcaggctgatctcaaactcccgacctcaggtgatttacccgccttggcctcccaaagtgctgggattacaggtgtgagtcactgtgcccggccTGCTTTTTC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1009822  43 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3413116   0 - 125196307 C
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=349975.000000
s hg38.chr14_KI270722v1_random     86431 373 +    194050 TTTTCATCTCATCCTGATTTCCGAATACA------------GGAGAGGAGC-------TGAGTTGGTGTTCACTAACAAGCACGGCAGCTTTGTTACATTTACTGTGTCATTCTTGTCAAAACCTGAAGGGTGTGTTTGTGGGGTGACGAGGTTCAGTCCCCTGTGACCTGTGCATCTGGCCAGCAC-TGTGGTGACATCCTTAGGAATCCATGGGGA-AAGAGAAAGCATTCCAGAGTTAGTGGGTCACGTTT-GACAAGGGCCAGTAAAGAAATATGCAAAGACAAAAAACAAGAAGAACATTGTCATATTTTCTACCTTTTGTTTATATAAATTTATGTCAATGAT----TCTAGCTTATGTTaatatgcaatgtatacaatatgctaacatatac
s panTro4.chr3                 125171989 373 - 202329955 TTTTCATTTCATCCTGATTTCTGAATACA------------GGAGAAGAGC-------TGAGTTGGTGTTCACTAACAAGCACAGAAGCTTTGTTACATTTACAGTGCCATTCTTGGCAAAACCTGAAGGGGGTGTTTGTGGGGTGGTGAGGTTCAGTCCCCTGTGACCTGTGCATCTGGCCAGCAC-TGTGGTGACATCCTTAGGAATCCATGGGGA-GAGAGAAAGCGTTCAGGAGTTAGTGGGACACGTTT-GACAAGGGCCAATAAAGAAATATGCAAAGACAAAAAACAAGAAGCACATTGTCATATTTTCTACCTTTTGTTTATATAAATTTATGTCAATGAT----TCTAGCTTACGTTAATATGCAATGTATACAATATGCTAACATATAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811613 377 - 202140232 TTTTCATTTCATCCTGATGTTCAAATACA------------GGAGAGTAGC-------TGAGTTGGTGTTCACTAACAAGCACAGGAGCTTTGTTACATTCACGTTGTCATTCTTGGCAAAACCTGAAGGGTGTGTTTGTGGGGTGATGAGGTTCAGTCCTCTGTGACCTGTGCATCTGGCCAGCATGTGTGGTGACATCCTTAGGAATCCATGGGGA-GAGCGAAAGCATTCAGGAGTTAGTGGGACATGTTT-GACAAGGGCCAATAAAGAAATATGTAAGGAC-AAAAACAAGAAGCAAATTGTCATATTTTGTACCTTTTGTTTATATAAATTTATGTCAGTGATTCTATCTAGCTTATGTTAATATGCAATGTATACAATATGCTAACATATAC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27508424 371 -  28733288 TTTTCATCTCATCCTGATATCCAAATACA------------GGAGAGGAGC-------TGAGTTGGTGTTCACTAACAAGCATAGAAGCTTTGTTACATTTACAGTGTCATTCTTGGCAAAACCTGAAGGGTGTGTTTGTGGGGTAATGAGGTTCAGTCCCCTGTGACTTGTGCATCTGGCCAGCAC-TGTGGGGACATCCTTAGGAATCCATGGGGA-GAGAGAAAGCATTCAGGAGTTAGTGGGACACGTTT-GACAAGGGCcaataaagaaatatgcaaagacaaaaagcaagaagcaCATTGTCGTATTTTCTACCTTTTGTTTATATAAATT--TGTCAATGAT----TCTAGTTTATGTTAATATGCAATGTATACAATATGCTAGCATATAC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413116 362 - 125196307 tttgtattttattctaatgTCTGTTTACAGTGCCAGTTTAGGGGGAAGAGCTGGTTTGTGATTTGGTGCTCACAACCA---TCAGTAAGTTTGTTACATCTGAAATGTGATTCTTGGCAAAACCTTAAGGGTGTGTTTTCTGGGTGATGAGGTTCAGTCCCTGGTGAACCTTGCTTTTAGCCAGCACATGT---GACATCCTTCAGATTACACTGGGA------AAATCATTCAGGAGTTACTGGGATGCATTTGGACAAGGGTCCACACAAAGATATGCAAAGAA-TAAAATGCACCACAGATTTTCATAATTTGTACCTTTTCCTTATATAAATTTATCTCAGTGATTCTATCTAGTTT-TCTTAATATACGAT-----------------------
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120478237 386 - 155834243 TTTTCATTTCATCTCAATGTGTGAATACAGTGCCAGTCA--GGGGAGGAGC-------TCAGTTGGTGCTCACTTATAAGCACAGAAGCTTTGTTACATTTACATTGTCATTCTTGGCAAGACCTGAAGGGTGTGTTTGCAGGGTAATGAGGTTCAATCCCTTGCAAGCTGTGCGTCTAGCCAGCACATGTGCTGACATCCTTAGGGATCCATGGGGAAAAGAGAAAGCATTCAGGAGTTAGTGGGACATGTTT-GACAAGGGTCAATAAAAAAATATGCAAAGACAAAAAACA---AGCACATTGTCATATTTTCTACCTTTCATTTATATAAACTTATGTCAATGATTCTATCTAGTTTATGTTGATATACAATGTGTATAATATACTAACACATAT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1009822  43 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=72246.000000
s hg38.chr14_KI270722v1_random     86804 60 +    194050 aatataTGTTTATAGTTTAAACATTTCTGTCATGTTTTCAGATTC-TTTAAAGATTATATT
s panTro4.chr3                 125172362 60 - 202329955 AATATATGTTTATAGTTTAAACATTTCTGTCATGTTTTCAGATTC-TTTAAAGGTTATATT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159811990 60 - 202140232 AATATATGTTTGTGGTTTAAACATTTCTGTCATGTTTTCAGATTC-TTTAAAGATTATATT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27508795 60 -  28733288 AATATATGTTTGTAGTTTAAACATTTCTGTCATGTTTTCAGGTTC-TTTAAAGATTATATT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413478 54 - 125196307 --TGTAGGTTTGTAGTTGAAA-ATACctgtcatgttttc---ttt-tttaaagattatgCT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120478623 59 - 155834243 AATAT--GTTTATAGTTTAAAAATTCCTGTCATGTTTTCAGGTTCTTTTAAAGATTATATT
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1009865 57 -   1077187 AATATGTGTACTTAATATAGA----CCTGTCATGTTTTCAAACTCTTTTAAAGACTGCATT
i otoGar3.GL873804             I 43 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=93960.000000
s hg38.chr14_KI270722v1_random     86864 116 +    194050 -ACACTTC--CTATTTCAGATAGCTGCTT-AAAATGAGTAAGGAAAAACGGATGTGTGCATCAGTTGTAA--CTGTTTATGGACTAAAA--C---------TAGTTGATTTCCTGGTTAAGAACAAAAAGTGA
s panTro4.chr3                 125172422 112 - 202329955 -ATGCTTC--CTATTTCAGATAGCCGCTT-AAAATGAGTAAGGAAAAACGGATGTGTGCATCAGTT------CTGTTTATGGACTAAAA--C---------TAGTTGATTTCTTGGTTAAGAACAAAAAGTGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812050 114 - 202140232 -ACACTTC--CTATTTCAGATAGCCGCTT-AAAATGAGTAAGGAAAAATGGATGTGTGCATCAGTT------CTGTTTATGGACTAAAACTC---------TAGTTGATTTCTTGGTTAAGAACAAAAAGTGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27508855 112 -  28733288 -ACGCTTC--CTATTTCAGATAGCCGCTT-AAAATGAGTAAGGAAAAACGGATGTGTGCATCAGTT------CTGTTTATGGACTAAAA--C---------TAGTTGATTTCTTGGTTAAGAGCAAAAAGTGA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120478682 118 - 155834243 ---GTTTC--CTATTTCAGACAGCCATTTGAAAATGAGTAAGGAAAAATGGATGTGTGCATCACTTATAAATGTGTTTATGGACTCAAA--CTGCAGTTAGTAGTTGATTTCT-------GAACAAAAA-TGA
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1009922 120 -   1077187 AATTCTTCTGCTCTTTTAGCTAACCATTT---AATGAATAAGGAAAAATGAATGTGCACGTCAATCATAATTATGTTTATGGACCAGAG--CTG-------TAGTTAATACTGTAGTCA-GTCAAAAAAGTGA
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3413532   0 - 125196307 C
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=261289.000000
s hg38.chr14_KI270722v1_random     86980 270 +    194050 CAAACTAGTTAACTGAAAATTTTAAGTAGGCAATTATAGTTT-TAGCTTTAAAGT-AAAATATTAACTATGCTCCATTCTTGCATTTTTAACCTAATACTCAA-----------TATAAATCGCCACATGCCATGTTTCAGATCAAGGTTCTACTTGTGATCTCTCATGAGTTTTTCAAGGTTTTAATTATCTGCGATGAAACTACATACCAGTAACCTTACTGGCTTAAACCAGGAATTTATTCTTTTTCCATGTCACAATTTTCTGGGTCAAGACACTGGA
s panTro4.chr3                 125172534 269 - 202329955 CAACCTAATTAACTGAAAATTTTAAGTAGGCAATTGTAGTTT-TAGCTTTAACGT-AAAATATTAACTATACTCCATTCTTGCATTTTTAACCTAATACTCAA-----------TATAAATCTCCACATGCCATGTTTCAGATCAAGGTTCTACTTGTGATCTCTCATGAGTTTTTCAACgttttaattatctgtgatgtaacaacgtaccagtaaccttgctggcttaaaccaggaattta-tccttttatatgtcacaattttctgggtcaagacactgga
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812164 269 - 202140232 CAACCTAATTAACTGAAAATTTTAAGTAGACAATTATGGTTT-TAGCTTTAACAT-AAAATATTAATTATGCTCCATTCTTGCATTTTTAACCTAATACTCAA-----------TATAAATCTCCACATGCCATATTTCAGATCAAGGTTCTACTTGTGATCTCTCATGAGTTTTTCAAGgttttaattatctgcgatgtaacagtgtaccagtaacctt-ctggcttaaaccaggaatttattctttttacatgtcacaattttctgggtcaagacactgga
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27508967 271 -  28733288 CAACCTAATTAACTGAAAATTTTAAGTAGGCAATTATAGTTT-TAGCTTTAACGTAAAAATATTAACTATGCTCCATTCTTGCATTTTTAATCTAATATTCAA-----------TATAAATCTCCACATGCCAGGTTTCAGATCAAGGTTCTACTTGTGATCTCTCATGAGTTTTTCAAGgttttaattatctgcgatgtaacaacgtaccagtaaccttactggcttaaaccaggaatttattctttttacatgtcacaattttctgggtcaagacactgga
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413532 272 - 125196307 CAATCTAat--actgaacattttaaattcatgatTACAGTCTAGAGTTCTAACAT-AA---GTGAAATGtgctttattcatttctgttgAAGCTCATATTCACACACCCTATTTTTCAAACCAACGCACCCTATGTTTCAAACCAAAGTGCTACCTATGGTCTCGAATAACTTTTTCAGTGTTCCAGTTATCTGCTGtgtaacaaagtactacaaaaC--ACTGGCTCAA--CACGAAATTATTCTTATTACATATGAGAATGTTGTGGGTCAGGAT-CTGAA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120478800 253 - 155834243 CCACCTCATTAATGGAAAATTTTAAATAG----TTATAGTTT-TAGCTCTAATAT-AAAGTATGAAATATGCT-CATTCTTGCCTTTTTAGCCTAAT----AA-----------TACAAATCTCCACATTCCATATTTCAAATCAGGGTACTACTTGGGATCTCTCATGAGTTTTTCAAGGTTTTAATTATCTGCTATG--------TACCAGTAACGTTACTGGCTTAAACTAGAAATTTATTCTTTTTACATGTTACAattttctgggtcatgacgctgga
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010042 209 -   1077187 ------------------------------------------------------T-ATAAAGTGAATTATACC----TTTAAAATTTTTATTCTAATATTAAA-----------TCTAAAGCTAAACTCACTATGTTTCAAAATAAGGTACTGCCTATGGTCTCTAATGACTCCTGAGGCATTCTAATTATCTGCTTTATAACAAAGTACCACAAAAGTTACTAGTTTAGAACTGGAAT----TCTTATTACATGTCACAAGTTTGGGGTTCAGTAAATTAGA
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=36727.000000
s hg38.chr14_KI270722v1_random     87250 33 +    194050 GAGAGCGGTGTGGGTTGGCTGCTTCATGATGTC
s panTro4.chr3                 125172803 33 - 202329955 cagggtggtgtgggttggctgcttcatgatgtg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812433 33 - 202140232 tggggcagtgtgggttggctgcttcatgatgtc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509238 33 -  28733288 cagggcagtgtgggttggctgcttcatgatgtc
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413804 33 - 125196307 CAAGGCCGTGTGGGTTGGCTGCTTCCTGAAGCC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479053 33 - 155834243 cagggcagtgtgggttggcagcttcatgatgtc
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1010251  0 -   1077187 C
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=700.000000
s hg38.chr14_KI270722v1_random     87283 1 +    194050 C
s panTro4.chr3                 125172836 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812466 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509271 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413837 1 - 125196307 T
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479086 1 - 155834243 t
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE941085v1              103504 1 -   1133132 C
i tarSyr2.KE941085v1           N 0 N 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1010251 0 -   1077187 C
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=80618.000000
s hg38.chr14_KI270722v1_random     87284 123 +    194050 ctggtct-catctggaagg---actctaatggctggggacgtgaagcaggcacccagaaggactctagtggctggggacatggagcaggcacccagccctctctttgtggccagcacggacttcctt
s panTro4.chr3                 125172837 123 - 202329955 ctggtct-catctggaagg---actctagtggctggggacgtggagcaggcacccagaaggactctagtggctggggacgtggagtaggcacccagccgtctctttgtggccagcacagacttcctc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812467  84 - 202140232 ctggtct-catctg------------------------------------------gaaggactctagtggctggggatgtggagcaggcacccagccctctctttgtggccagcacggacttcctc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509272 121 -  28733288 ctggtct-catctggaagg---actctagtggctggggatgtggagcaggcacccagaagga--ctagtggctggggacgtggagcaggcacccagccctctctttgtggccagcatggacttcctc
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413838 125 - 125196307 CTGGTCTGCACCAGGGCAGTGTAGTCTGCTTCATATGGTCTCTGATC--TCAGCTGGAAGGACAGCTATGTCTGCGGACATTGAGGAGGCACCCAGGCCTCTCCTTGTGGCCAGACTGGACCTCCTC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479087  83 - 155834243 ctggtct-cagctggatgg---actc----------------------------------------agtggcaggggACATGGAGCAGGCACCCAGCCCTCTCTTTGTGGCCAGCACATACTTcctc
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1010251   0 -   1077187 C
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=172585.000000
s hg38.chr14_KI270722v1_random     87407 174 +    194050 ccagtctggcagcgtc-aggtagtcaggtttgtctggcttctcccagggtgtgtgtccaagaggcccaggcaaaagctgtaaggcctctcatgattgcccctcaaaagtcccagagcatccctcctgccacactgt-ccagttgtactcatca----------------ctgagaccagccatgattcaagg
s panTro4.chr3                 125172960 174 - 202329955 ccagtctggcatcacc-aggtagtcaggtttgtctggcttctcccagggcgtgtgtccaagaggcccaggcagaagctgtaaggcctctcatgatcgcccctcagaagtcccagagcatctctcctgtcacactgt-ccagtcatactcatca----------------ctgagaccagccacgattcaagt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812551 174 - 202140232 ccagtctggcagcatc-aggtagtcaggtttgtctggcttctcccagggtgtgtgtccaagaggcccaggcagaagctgtaaggcctctcatgatcgcccctcagaagtcccagagcatctctcctaccacactgt-ccagtcgtactcatca----------------ttgagaccagccacgattcaagg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509393 190 -  28733288 ccagtctggcagcgtc-aggtagtcagctttgtctggcttctcccagggtgtgtgtccaagaggcccaggcagaagctgtaaggcctctcatgatcgcccctcagaagtcccagagcatctctcctgccacactgt-ccagtcgtactcatcactagtcatactcatccctgagaccagccatgattcaagg
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3413963 171 - 125196307 CCAGTCCAGCAATCTCGGGGTAGCTAGGTTTATCTGGCATCTCCCAGAGCAGGTATGCAAGAGGCCCAGGCAGAGGCTGAGAGGCTTTTCATGATCTTCCCTCAGAATTCCCAAAATATCTCTACCAACGCATTCT-CC---CAGGCTCATCA----------------CAAAGAGCAGTC-CAGTTCAAGT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479170 175 - 155834243 ccagcctagcagtgtcagggtagtcagatttgtctggcttctcccagggtgtgtgttcaggaggcccaggcagaagctgtaaggcttctcattatcgcccctcagaagtccgagagcatctctcctgccacactgtattagtcatactcttca----------------ctgagagcagccacaattcaag-
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010251  71 -   1077187 -----------------------------------------------------------------CCAGGCTG--------------CTTATGAT-----------------GGGGCATCTCTTCTTCCACATTCT-CT--------TCATCA----------------CTAGGACCAGCCCCAATTCACGT
i otoGar3.GL873804             C 0 I 122
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=122666.000000
s hg38.chr14_KI270722v1_random     87581 127 +    194050 gggataggtgattagattccacctcttgatgagaagcatagtaggaacctgcagcagtctttaataaaccacagcttgtcctctggccacaaactattaacgcttctcccacatgcaaattattc-----------tt
s panTro4.chr3                 125173134 125 - 202329955 ggggaaggggattagattcccccttttgatgagaagcatagtaggaacctgcagcagtc--taataaaccacagcttgtcctctggccacaaactattaacatttctcccacatgcaaattatgc-----------tt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812725 127 - 202140232 ggggaagatgattagattccacctcttgatgagaagcatagtaggaatctgcagcagtctttaataaaccgcagcttgtcctctggccacaaactactaacatttctcccacatgcaaaatatgc-----------tt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509583 127 -  28733288 ggggaaggtgattagattccacctcttgatgagaagcgtagtaggaatctgcagcagtctttcataaaccacaGCTTGTcctctggccacaaactactaacatttctcccacatgcaaaatatgc-----------tt
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414134 132 - 125196307 GCCG--GGCAATTCCATTTCAATTACC-ATAAGAGGAATAGTAAG-ATTTGCAACAGTCTTTAATAAACTAC--TTTGCCTTCTGGCTACAAGTTATTTACATTTCTTCCACATGCAAAATGTGCTATGCCCCTTGTG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479345 127 - 155834243 ggcgaaggtgattagattccaccttttgataagaagaatagtaagaatctgcagcagtctttaataaaccacagcttgccctctggtcacaaactattaacatttctcccacatgcaaaatatac-----------tt
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e otoGar3.GL873804               1010322 122 -   1077187 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=67093.000000
s hg38.chr14_KI270722v1_random     87708 63 +    194050 tgcccctctcaagagccccagaatggttttc--ct--tatggcactggctggtagcccaactgaatc
s panTro4.chr3                 125173259 62 - 202329955 tgcccctctcaagagccccagaatggttttc--ct--tatggcactggctgg-agcccaactgaatc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812852 63 - 202140232 tgcccctctcaagagccccagaatggttttc--ct--tatggcactgactggaagcccaactgaatc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509710 63 -  28733288 tgcccctctcaagagccccagaatgcttttc--ct--tatggcactgtctggaagcccaactgaatc
i nomLeu3.chr24                C 0 I 178
s papAnu2.chr9                   3414266 58 - 125196307 TGCCCCTCTGAAGAGCCCCAGAAATCTTTTC--CTGCTATGGAACTGGCTGAAAGCTTAT-------
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479472 56 - 155834243 tgcccctctcaagagccccagaactgttttc--ct--tatggcgctagctgaaagcccaA-------
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010444 56 -   1077187 TGCCCCTCTCAAGAGCACCTTAAATCTTTTCTTCT--TATGACAGTGT----AAACTCAATA-----
i otoGar3.GL873804             I 122 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=29252.000000
s hg38.chr14_KI270722v1_random     87771 38 +    194050 ctgaatcagg------tTGTGGTGGCCTGTCATCTGCA---CCCACA
s panTro4.chr3                 125173321 44 - 202329955 ctgaatcaggtTGTGATTGTGGTGGCCTGTCATCTTCA---CCCACA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812915 31 - 202140232 ctgaatcagg------tTGTGGTGGCCTGTCATCTGC----------
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27509951 41 -  28733288 CTGAATCAGG------TTGTGGTGGCCTGTCATCTGCACCCCCCACA
i nomLeu3.chr24                I 178 C 0
s papAnu2.chr9                   3414324 40 - 125196307 CCACATTAGG------TACTGGTGGCCCGTCTTCTGCC-ACCCCACA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120479528 37 - 155834243 CCAGATTGGG------TT-TGGTGGCCTgttatctgcc---cctcca
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010500 35 -   1077187 --AAATCAGG------TCCTGGTAGGCTGTCA-CTGCC---CATCCA
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-1203.000000
s hg38.chr14_KI270722v1_random     87809 5 +    194050 --CACAC
s panTro4.chr3                 125173365 5 - 202329955 --CACTC
i panTro4.chr3                 C 0 I 526
s nomLeu3.chr24                 27509992 5 -  28733288 --CACTC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414364 3 - 125196307 --AAC--
i papAnu2.chr9                 C 0 C 0
s otoGar3.GL873804               1010535 5 -   1077187 CATAC--
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120479565 0 - 155834243 C
e ponAbe2.chr3                 159812946 0 - 202140232 C
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=3432.000000
s hg38.chr14_KI270722v1_random     87814 5 +    194050 AGCCA
s panTro4.chr3                 125173896 5 - 202329955 AGCCG
i panTro4.chr3                 I 526 C 0
s nomLeu3.chr24                 27509997 5 -  28733288 AGCCA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414367 5 - 125196307 AGCCA
i papAnu2.chr9                 C 0 I 34
s otoGar3.GL873804               1010540 5 -   1077187 ACCCA
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120479565 0 - 155834243 C
e ponAbe2.chr3                 159812946 0 - 202140232 C
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=20084.000000
s hg38.chr14_KI270722v1_random     87819 101 +    194050 CAGTGAGGACTGAATCAGGTTGTGGTGGCCTGTCATCTGCACCT--GACACACTCAGCCGCAGTGAGGACTGAATCAGGTTGTTGTGACCTATCATCTGCA---CC
s panTro4.chr3                 125173901 102 - 202329955 CAGTGAGGACTGAATCAGGTTGTGGTGGCCTGTCATCTGCCCCC-CGACACACTCAGCCACAGTGAGGACTGAATCAGGCTGTGGTGGCCTGTCATCTGCG---CC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159812946  62 - 202140232 ---------------------------------------CCCCC--GACACACTCAGCCGCAGTGAGAACTGAATCAGGTTGTGCTGGCTTGTCATCTGCA---CT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510002 106 -  28733288 CAGTGAGGACTGAATCAGGTTGTGGTGGCCTGTCATCTGCCCCCCCCACACACTCAGCTGCAGTGGGAACTGAATCAGGTTGTGGTGGCCTGTCATCTGCACCCCC
i nomLeu3.chr24                C 0 C 0
s otoGar3.GL873804               1010545   3 -   1077187 --------------------------------------------------------------------------------------------------GCA-----
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120479565   0 - 155834243 C
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3414372  34 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=3312.000000
s hg38.chr14_KI270722v1_random     87920 14 +    194050 CACACACTCAACCA
s panTro4.chr3                 125174003 14 - 202329955 CACACACTCAGCCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813008 12 - 202140232 CCCACA--CAGCCG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510108 14 -  28733288 CACACACTCAGCCA
i nomLeu3.chr24                C 0 I 235
s calJac3.chr7                 120479565 14 - 155834243 cacacacccagtgc
i calJac3.chr7                 C 0 I 1
s otoGar3.GL873804               1010548  2 -   1077187 --------CA----
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3414372 34 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=74100.000000
s hg38.chr14_KI270722v1_random     87934 116 +    194050 CAGTGAGGGGAGTGGTGTGAAAACAGTCGGCATTTCCCTTTAGAAGCTGTTGGTGGGAGGTAGGAGGGAGGTGCTGCCCTGCAGGCCCCGTCT--AACAGTTGGTCATTCC-CATGGGG
s panTro4.chr3                 125174017 116 - 202329955 CAGTGAGGGGACTGGTGTGAAAACAGTCGGCATTTCTCTTTAGATGGGGTTGGTGGGAGGCAGGAGGTAGGTGCTGCCCTGCAGGCCCCGTCT--AACGGTTGGTCATTCC-CATGGGG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813020 116 - 202140232 CAGTGTGGGGACTGGTGTGAAAACAGTCGGCATTTCTCTTTAGACGGGGTTGGGGGGAGGCAGGAGGTAGGTGCTGCCCTGCAGGCACCGTCT--AACAGTTGGTCATTCC-CATGGGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510357  88 -  28733288 CAGTGAGGGGACTGGTGTG--AACAGTCGGCATTTCCCTTTAGACGGGGTTGGTGGGAGGCA--AGGTAGGTGC--------------------------ATGGTCATTCC-CATGGGG
i nomLeu3.chr24                I 235 C 0
s calJac3.chr7                 120479580  98 - 155834243 cagtgaggagactggtctgaaaacagtgggcatttccctttagacagggttggtgg------------------tgtgctgcaggcacagtct--gacaattggtcattcc-cattggg
i calJac3.chr7                 I 1 C 0
s otoGar3.GL873804               1010550 105 -   1077187 CCATGAGAAGACCGGCCTGAATGTAATGGGCACGTCCCTGTAGTCAGGGGTGGAGGGAGGCA--------------CTCCCCAGGCACTGTTCTGAGCAGTTAAAGAGTCCTCATTGGG
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e papAnu2.chr9                   3414372  34 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=172312.000000
s hg38.chr14_KI270722v1_random     88050 191 +    194050 CGCCTGTTACAGTTCTGTGATTAGTGCCCAGTCCTGGTCCCTGAGAACCGCGCCCAGTCCTGGTCCCTGAGAACGGCG-TTTGTGTCCTTTTACTCCTCCCTCTGGGCTTTTGTCATTCTCCA-----------TGTTCTTTTTCCT-----TCATTGCCTGGGTTGCCGTTGACCAAATTTCTCTGCCT------------CTTTCTTATGGTCAATAG----
s panTro4.chr3                 125174133 191 - 202329955 CACCTGTCGCAGGTCTCTGATTAGTGCCCAGTCCTGGTCCCTGAGAACGACGCTGGGTCCTGGTCCCTGAGAATGGCG-TTTGTGCCTTTTTACTCCTCCCTCTGGGTTTTTGTCATTCTCCA-----------TGTTCTTTTTCCT-----TCAGTGCCTGGGTTGCCATTGACCAACTTTCTCTGCCT------------TTTTCTTATGGTCAATAG----
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813136 191 - 202140232 CACCTGTTGCAgttctctgattagtgcccagtcctggtccctgagaatgatgtccagtcctggtccctgagaacggtg-tttgtgcctttttactcctccctctgggcttttgtcattctcca-----------tgttctttttcct-----tcagtgcctgggttgccgttgaccaactttctctgcct------------ttttcttatggtcaatgg----
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510445 165 -  28733288 CGCCTGTGGCAGTTATCTGATTAGTGCCCA--------------------------GTTCTGGTCCCTGAGAACGGCG-TATGTGCCTTTTTACTCCTCCCTCTGGGCTTTTGTCATTCTTCA-----------TGTTCTTTTTCCT-----TCAGTGCCTGGGTTACCGTTGACCAACTTTCTATGCCT------------TTTTCTTATGGTCAGTAG----
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414406 155 - 125196307 CACCTGCTCCAGTTCATTGATTAGGACCCAGTCCT------------------------------------AACATGC-TTcgtgcctgttcactctgcccTCTGGGCTCTCACCATTCTCca-----------tgttctttttcct-----taattCCTGGGTTTGCAGTTGACCAATTTTCTCCACCT------------ATTTTTTGTTTACTGTAA----
i papAnu2.chr9                 I 34 I 4
s calJac3.chr7                 120479678 166 - 155834243 cacctgttgaagttctctgattagtgccca--------------------------gtcttggcccctgagaactatgctttgtgcctttttactctgccctctgggcttttgtcattctctg-----------tattctttctcct-----tcagtgcctggtttgcagttcaccaactttctctgccc------------tttccttatggtcagtag----
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010655 198 -   1077187 CACTTGTTTCCATTCTTTGTTTAAGACTCA--------------------------GTCCTGAACCCTGGGAAAGATGCTTCATGCCTTTACATTCTGTTGTCTGGGCACTTGCTAGTCTATGAGTTGATATTCTGTTCTTTGTCTTGAGAATAGTTTCTGGGCTTGCATGTGACCAAGTTTCTCCAGCTGGCACTGGAGAAGTTTCTTGTTTATAGTAGTCTG
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19648347 3942 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=11339.000000
s hg38.chr14_KI270722v1_random     88241 7 +    194050 GGTATTC
s panTro4.chr3                 125174324 7 - 202329955 AGTATTC
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19652289 7 -  19803153 AGTATTC
i panPan1.JH650580             I 3942 I 1669
s ponAbe2.chr3                 159813327 7 - 202140232 ggtattc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510610 7 -  28733288 GGTATTC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414565 7 - 125196307 GAAACCC
i papAnu2.chr9                 I 4 C 0
s calJac3.chr7                 120479844 7 - 155834243 ggtattc
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010853 7 -   1077187 AGGATTC
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=14454.000000
s hg38.chr14_KI270722v1_random     88248 51 +    194050 AATGG-Cttctttttcatttttttttccttttcttttctttttttttttttt
s panTro4.chr3                 125174331 50 - 202329955 AGTGG-CTTCTttttca-ttttttttccttttcttttctttccttttttttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813334 41 - 202140232 aatgg-cttctttttca--ttttTTTCCTTTTCTTTTTTTTTTT--------
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27510617 40 -  28733288 AATGG-Cttctttttca--tttttttctttttctttttttttt---------
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414572 26 - 125196307 GGTGACcccccttttca--ttttcttct------------------------
i papAnu2.chr9                 C 0 I 1
s calJac3.chr7                 120479851 27 - 155834243 agtgg-cttctttttcactttgttttgc------------------------
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010860 21 -   1077187 ACTGG-CC----TTTAA--TATTTTTCT------------------------
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e gorGor3.chr3                 122207485 4185 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-1107.000000
s hg38.chr14_KI270722v1_random     88299 1 +    194050 -t
s panTro4.chr3                 125174381 1 - 202329955 -T
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122211670 1 - 199944510 -t
i gorGor3.chr3                 I 4185 I 1624
s otoGar3.GL873804               1010881 1 -   1077187 G-
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120479878 0 - 155834243 C
e ponAbe2.chr3                 159813375 1 - 202140232 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e papAnu2.chr9                   3414598 1 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27510657 0 -  28733288 C

a score=31994.000000
s hg38.chr14_KI270722v1_random     88300 25 +    194050 GCTTTGGCCTTTTGAGACAAGAAAT
s panTro4.chr3                 125174382 25 - 202329955 ACTTTGGCCTTTTGAGACAATAAAT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813376 25 - 202140232 ACTTTGATCTTTTGAGACAAGAAAT
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27510657 23 -  28733288 --tttGGCCTTTTGAGACAAGAAAT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414599 25 - 125196307 actCTGGACTTTGGGTACAAAAAAT
i papAnu2.chr9                 I 1 I 372
s calJac3.chr7                 120479878 25 - 155834243 acttttgccttttgagACAAGACAT
i calJac3.chr7                 C 0 I 1
s otoGar3.GL873804               1010882 25 -   1077187 ACTATGGCTTTTTGGCACAGGAAAT
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e gorGor3.chr3                 122211671 1624 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=4558.000000
s hg38.chr14_KI270722v1_random     88325 11 +    194050 TATttctttat-
s panTro4.chr3                 125174407 11 - 202329955 TATttctttat-
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813401 11 - 202140232 TATttctttat-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510680 11 -  28733288 TATttctttat-
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120479904  9 - 155834243 Tttttctgt---
i calJac3.chr7                 I 1 C 0
s otoGar3.GL873804               1010907 11 -   1077187 -GATTCCATATA
i otoGar3.GL873804             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e gorGor3.chr3                 122211671 1624 - 199944510 I
e papAnu2.chr9                   3414624 372 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=14116.000000
s hg38.chr14_KI270722v1_random     88336 9 +    194050 attttctct
s panTro4.chr3                 125174418 9 - 202329955 attttctct
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813412 9 - 202140232 attttctct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510691 9 -  28733288 attttctct
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3414996 9 - 125196307 ATTTCCCCT
i papAnu2.chr9                 I 372 C 0
s calJac3.chr7                 120479913 9 - 155834243 attttctct
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804               1010918 9 -   1077187 ATTCCTTCT
i otoGar3.GL873804             C 0 T 21594
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e gorGor3.chr3                 122211671 1624 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=541758.000000
s hg38.chr14_KI270722v1_random     88345 621 +    194050  
s panTro4.chr3                 125174427 608 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159813421 636 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27510700 599 -  28733288  
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3415005 643 - 125196307  
i papAnu2.chr9                 C 0 I 2
s calJac3.chr7                 120479922 604 - 155834243  
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122211671 1624 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=683800.000000
s hg38.chr14_KI270722v1_random     88966 962 +    194050  
s panTro4.chr3                 125175035 966 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159814057 978 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27511299 954 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120480526 901 - 155834243  
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19652296 1669 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122211671 1624 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1365.000000
s hg38.chr14_KI270722v1_random     89928 1 +    194050 t
s panTro4.chr3                 125176001 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19653965 1 -  19803153 T
i panPan1.JH650580             I 1669 I 146
s ponAbe2.chr3                 159815035 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27512253 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120481427 1 - 155834243 t
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122211671 1624 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1365.000000
s hg38.chr14_KI270722v1_random     89929 1 +    194050 t
s panTro4.chr3                 125176002 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122213295 1 - 199944510 t
i gorGor3.chr3                 I 1624 I 1222
s ponAbe2.chr3                 159815036 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27512254 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120481428 1 - 155834243 t
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19653966 146 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=42284.000000
s hg38.chr14_KI270722v1_random     89930 52 +    194050 gggtcttgctttcctctcaggtctggcagtctctgtcttaagtagagtattt
s panTro4.chr3                 125176003 52 - 202329955 gggtcttgctttcctctcaggtctggcagtctctgtcttaagtagagtattt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159815037 52 - 202140232 gggtcttgctttcctctcaggtctggcagtctctgtcttaagtagagtattt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27512255 48 -  28733288 gggtcttgctttcctctcaggtctggcagtctctgtct----tagagtattt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120481429 52 - 155834243 ggctcttgctttcctatcaagcatggcagtctctgtcttaagtagagtattt
i calJac3.chr7                 C 0 I 893
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19653966 146 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=43536.000000
s hg38.chr14_KI270722v1_random     89982 87 +    194050 gtccagttacattgtaactaatcattgctaaggttggttttaggtctgccatgtttctacttattttctatttgttta--------tttttttta
s panTro4.chr3                 125176055 95 - 202329955 gtccagttacattgtaactaatcattactaaggttggatttaggtctgccatttttctacttattttctatttgtttgtttttttttttttttta
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159815089 91 - 202140232 gtccagttacattgtaactaatcattactaaggttggatttaggtctgccatttttctacttattttctgtttgttta----attttctttttta
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27512303 94 -  28733288 gtccagttacattgtaactaatcattactaaggttggatttaggtctgccatttttctacttattttctatttgttta-atttttttttttttta
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e panPan1.JH650580              19653966 146 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-311.000000
s hg38.chr14_KI270722v1_random     90069 1 +    194050 a
s panTro4.chr3                 125176150 1 - 202329955 c
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19654112 1 -  19803153 c
i panPan1.JH650580             I 146 I 1235
s ponAbe2.chr3                 159815180 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27512397 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=182264.000000
s hg38.chr14_KI270722v1_random     90070 347 +    194050 gacagggtcttgctctgtcacccagactgtagtgcaatggtgcaatcttggctcactgcaacctctgcctcccaggcccaaccaatcttcacttgagacccctgagtagctgggactacaggtacatggcaccacacctggctaatttttatattttttgtagagatagggttttgccatgttgcacgggctggtcttgaactcctgagctcaagcaatctacccacattggcctcccagagtgttcagattacaggcataagccaccatgcctggccttcgtctgtcttttgatcttctatgtgttctttcctaacttcttttggg----ttaaatatttctaaatattc
s panTro4.chr3                 125176151 350 - 202329955 gacagggtcttgctctgtgacccagactgtagtgcaatggtgcagtcttggctcactgcaacctctgcctcccaggcccaaccaatcctcacttcagccccctgagtagctgggactacaggtgcatggcaccacacc-ggctaatttttatattttttgtagagatagggttttgccattttgcacaggctggtcttgaactcctgagctcaaacaatctacccaccttggcctcccaaagtgttgggattacaggcatgagccaccatgcctggccttcgtctgtcttttgatcttctatatattctttcctaacttcttttgggttaattaaatatttgtaaatattc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159815181 347 - 202140232 gacagggtcttgctctgtcacccagactgtagtgcaatggtgcaatcttggctcactgcaacctctgcctcccaggcccaaccaatcctcacttcagccccctgagtagctgggactacaggtgcatggcaccacacctggctaatttttatattttttgtagagatagggttttgccatgttgcagaggctggtcttgaactcctgagctcaagcaatctacccaccttggcctcccaaagtgttgggattacaggtgtgagccaccatgcctggcctt----tgtcttttgatcttctatatattctttcccaacttcttttgggttaattaaatatttttaaatattc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27512398 351 -  28733288 gacagggtcttgctctgtcacccagactgtagtgcagtggtgcaatcttggctcactgcaacctctgcctcccaggcccaaccaatcctcacttcagccccctgagtagctgggactacaggtgcatggcaccacacctggctaatttttatattttttgtagagatagggttttgccatgttgcacaggctggtcttgaactcctgagctcaagcaatctacccaccttggcctcccaaagtgttgggattacaggcgtgagccaccatgcctggccttcgtctgtcttttgattttctatatattctttcctaacttcttttgggttaattaaatatttctaAATATTC
i nomLeu3.chr24                C 0 I 615
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e panPan1.JH650580              19654113 1235 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=300.000000
s hg38.chr14_KI270722v1_random     90417 1 +    194050 c
s panTro4.chr3                 125176501 1 - 202329955 c
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159815528 1 - 202140232 c
i ponAbe2.chr3                 C 0 I 936
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e panPan1.JH650580              19654113 1235 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=28332.000000
s hg38.chr14_KI270722v1_random     90418 337 +    194050 agtttgattaatcttttggctttttgaaataattttttataggctaggcatggtggcttatgcttgtaatctcagctctgtgggaggccaagggaggtggattgcttgagcccaggaggttgagaccagcctgggcaacatggcaaaaccctctctacaagaaaaccaaaccaaaatttagcctgacatcttggtgtgcacctgtagtcccaattattcgggaggctgaggtgggagggttgcttgagcctgagaggttgaggctgcaatgagctgtgatcatgccattgctctcctgccagggcaacagagtaagatcctgtgtcaaaaaagttca
s panTro4.chr3                 125176502 335 - 202329955 agttcggttaatcttttggctttttcaaataattttttataggctgggcatggtggctcatgctcataatctcagctctgtgggaagccaagggaggtggattgcttgagcccaggaggtggagaccagcct--gcaacatggcaaaaccctgtctacaaaaaaaccaaaccaaaaattagcctgacatcgtggtgtgcacctgtagtcccaactattcgggaggctgaggtgggagggttgcttgagcctgggaggtcgaggctgcagtgagctgtgatcatgccattgcactcctgccagggcaacagagtaagaccctgtgtcaaaaaagatca
i panTro4.chr3                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e panPan1.JH650580              19654113 1235 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=86439.000000
s hg38.chr14_KI270722v1_random     90755 331 +    194050 tttttttaTAAATAATTTATTATTTAGaattttggtaacaaatacataccttaaaatttaccgtcataaccagttgtaagtatacagttttgtagagttaagaatatttacagtgttgtgtagcagatttctagattttt----atcttggaaaactctatacccatttaacaactattaatttccccctccttccacctcct-gcaagtactattctactttgtgtttctaaaaattcggcttatatacctagggttatgtaatatttgtt--------------gttccatattatgtgtcagatgtgtcaggattttcttcctttctatggctgaataatatttctt
s panTro4.chr3                 125176837 349 - 202329955 -ttttttATAAATAATTTATTAtttcgaattttggtgacaaacacatacgttaaaatttaccatcataaccagttgtaagtatacagttttgtagagttaagaatatttacagtgttgtgtagcagatttctagattttttttaatcttggaaagctctatacccattcaacaactattaatttccccctccttccacctcctggcaagtactattctactttgtgtttctaaaaatttggcttatatacctggggttatataatatttgttgttttgttaagtaggtttcatgttatgtgtcagatgtgtcaggattttcttcctttctatggctgaataacatttctt
i panTro4.chr3                 C 0 I 49
s panPan1.JH650580              19655348 349 -  19803153 tttttttataaataatttattatttagaattttggTAACAAACACATACCTTAAAATTTACCGTCATAACCAGTTGTACGTATACAGTTTTGTAGAGTTAAGAATATTTACAGTGTTGTGTAGCagatttctagatttttttt-atcttggaAAACTCTATACCCATTCAACAACTATTAATTTCCCCCTCCTTCCACCTCCTGGCAAGTACTATTCTACTTTGTGTTTCTAAAAATTTGGCTTATATACCTGGGGTTATataatatttgttgttttgttaagTAGGTTTCATGTTATGTGTCAGATGTgtcaggattttcttcctttctatggctgaataatatttctt
i panPan1.JH650580             I 1235 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=282.000000
s hg38.chr14_KI270722v1_random     91086 3 +    194050 cat
s panPan1.JH650580              19655697 3 -  19803153 cat
i panPan1.JH650580             C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e panTro4.chr3                 125177186 49 - 202329955 I
e gorGor3.chr3                 122213296 1222 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=604.000000
s hg38.chr14_KI270722v1_random     91089 4 +    194050 atat
s panPan1.JH650580              19655700 4 -  19803153 atat
i panPan1.JH650580             C 0 C 0
s gorGor3.chr3                 122214518 4 - 199944510 gtgt
i gorGor3.chr3                 I 1222 I 228
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e panTro4.chr3                 125177186 49 - 202329955 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=1479.000000
s hg38.chr14_KI270722v1_random     91093 128 +    194050 atatatattttttccatatatattttttctatatatatatatatatttctatatatatatatattttatatatatatatatattttctatatatatatatatatattttctatatatatatatatata
s panPan1.JH650580              19655704  74 -  19803153 at---------------------------------tagatatatatt-----atatacatatattttacacacacacacacac-----------acacacacacat-----atacatatatatatata
i panPan1.JH650580             C 0 I 178
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e panTro4.chr3                 125177186  49 - 202329955 I
e gorGor3.chr3                 122214522 228 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=0.000000
s hg38.chr14_KI270722v1_random     91221 3 +    194050 tat
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e panPan1.JH650580              19655778 178 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e panTro4.chr3                 125177186 49 - 202329955 I
e gorGor3.chr3                 122214522 228 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27512749 615 -  28733288 I

a score=464.000000
s hg38.chr14_KI270722v1_random     91224 5 +    194050 tttct
s nomLeu3.chr24                 27513364 5 -  28733288 tttct
i nomLeu3.chr24                I 615 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e panPan1.JH650580              19655778 178 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e panTro4.chr3                 125177186 49 - 202329955 I
e gorGor3.chr3                 122214522 228 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=693.000000
s hg38.chr14_KI270722v1_random     91229 5 +    194050 atata
s panTro4.chr3                 125177235 5 - 202329955 atata
i panTro4.chr3                 I 49 C 0
s nomLeu3.chr24                 27513369 5 -  28733288 ttgta
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e ponAbe2.chr3                 159815529 936 - 202140232 I
e panPan1.JH650580              19655778 178 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122214522 228 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=79490.000000
s hg38.chr14_KI270722v1_random     91234 159 +    194050 tatatatatatccttttgtttatccatctattcccggagggacgttttggtttcttccaccttgtggctgtgtaatgctgctgtgaacttaggtgtgcacatatctgtttgaggtcctgctactagttattctgtctct--gtagaagttggatggctgga
s panTro4.chr3                 125177240 161 - 202329955 tatatatatatccttttgtttatccatccattcctggatggacgttttggtttcttccaccttgtggctgtgtaatgctgctgtgaacataggtgtgcatatatctgtttgaggtcctgctactagttattctgtctctctgtagaagttggatggctgga
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159816465 161 - 202140232 tatatatatatcctttcatttatccatccattcctggatagacgtttttgtttcttccaccttatggctgtgtaatgctgctgtgaacataggtgtgcatatatctgtttgaggtcctgctactagttattctgtctctctgtagaagttggattgctgga
i ponAbe2.chr3                 I 936 C 0
s nomLeu3.chr24                 27513374 157 -  28733288 tatgtatacatccttttgtttatccatccattcctggatagacgttttggtttcttccaccttgtggctgtgtaatgctgctgtgaacataggtgtgcacatatc----tgaggtcctgctactaattattctgtctctctatagaagttgggtggctgga
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120481481 893 - 155834243 I
e panPan1.JH650580              19655778 178 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122214522 228 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=15908.000000
s hg38.chr14_KI270722v1_random     91393 20 +    194050 tcatatggtcattttatttt
s panTro4.chr3                 125177401 20 - 202329955 tcatatggtcattttatttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159816626 20 - 202140232 tcacatggtcattttatttt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27513531 20 -  28733288 tcatatggtcattttatttt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120482374 20 - 155834243 tcatatggtaattttatgtc
i calJac3.chr7                 I 893 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19655778 178 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122214522 228 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=5733.000000
s hg38.chr14_KI270722v1_random     91413 3 +    194050 att
s panTro4.chr3                 125177421 3 - 202329955 att
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19655956 3 -  19803153 att
i panPan1.JH650580             I 178 I 279
s gorGor3.chr3                 122214750 3 - 199944510 att
i gorGor3.chr3                 I 228 I 279
s ponAbe2.chr3                 159816646 3 - 202140232 att
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27513551 3 -  28733288 att
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120482394 3 - 155834243 att
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=157873.000000
s hg38.chr14_KI270722v1_random     91416 187 +    194050 -ttttttgagaagccagttcatatttccaccaacagtgttcaagggtttcagtttcacctgcacttgttactttctgttgggtttgaagtgatgtccttttgtggtttctatttgcatttttctaatgactagtgatgttacacatcttctcatatatctcatgtatctgttggctatttgtatatca
s panTro4.chr3                 125177424 187 - 202329955 -ttttttgaggagccagttcatatttccaccaacagtgtacaagggtttcagtttcacctgcacttgttactttctgttgggtttgaagtgatgtcccattgtggtttctatttgcatttctctaatgattagtgatgttacgcatcttctcatatatctcatatatctgttggctatttgtatatca
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159816650 187 - 202140232 -ttttttgaggagccagttcatatttccaccaacagtgtacaagggtttcagtttcacctgcactcattactttctgttgggtttgaagtgatgtcccattgtggtttctatttgcgtttctctaatgattagtgatgttacacatcttctcatatatctcatgtatctgttggctatttgtatatca
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27513554 187 -  28733288 -ttttttgaggagccagttcatatttccaccaacagtgtacaagggtttcactttcacctgcgcttgttactttctgttgggtttgaagtgatgtcccattgtggtttctatttgtatttctttaatgattagtgatgttacacatcttctcatatatctcatgtatctgttggctatttgtatatca
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120482397 187 - 155834243 tctttttgaggagccagtttatatttccaccaacagtgcacaagggtttcactttcacctgcacttgttattttctgtcgggtatgaagtgatatctca-tgtggtttctatttgcatttctttaatgatgagtgatgttatacatcttttcatatgtctcatgtatctgttggctatttgtatatca
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19655959 279 -  19803153 I
e otoGar3.GL873804               1010927 21594 -   1077187 T
e gorGor3.chr3                 122214753 279 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=25687.000000
s hg38.chr14_KI270722v1_random        91603 24 +    194050 tctttgtatctttggataaatgtt
s panTro4.chr3                    125177611 24 - 202329955 tctttgcatctttggataaatgtt
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816837 24 - 202140232 tctttgcatctttggataaatgtt
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513741 24 -  28733288 tctttgcatctttggataaatgtt
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482584 24 - 155834243 tctttgtgtctttggataaatgtt
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13094 24 -     80344 tccctgtgtcttcatatggttgtt
i tupBel1.scaffold_142441.1-80344 N 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19655959 279 -  19803153 I
e otoGar3.GL873804                  1010927 21594 -   1077187 T
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=4037.000000
s hg38.chr14_KI270722v1_random        91627 3 +    194050 ctt
s panTro4.chr3                    125177635 3 - 202329955 ctt
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816861 3 - 202140232 ctt
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513765 3 -  28733288 ctt
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482608 3 - 155834243 ctt
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873787                   805650 3 -   1219906 CTC
i otoGar3.GL873787                n 21594 I 29
s tupBel1.scaffold_142441.1-80344     13118 3 -     80344 cta
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19655959 279 -  19803153 I
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=28609.000000
s hg38.chr14_KI270722v1_random        91630 37 +    194050 tgtcta-tttcttaatcactttatt---ttgttgttgggtt
s panTro4.chr3                    125177638 37 - 202329955 tgtcca-ctttttaatcactttatt---ttgttgttgggtt
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816864 37 - 202140232 tgtcca-ctttttaatcactttatt---ttgttgttgggtt
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513768 37 -  28733288 tgtcca-ttttttaatcactttatt---ttgttgttgggtt
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482611 41 - 155834243 tgtccatttttttaatcactttattttgttgttgttgggtt
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13121 26 -     80344 tgtgtg-tgtcctgatctttttttt---tt-----------
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19655959 279 -  19803153 I
e otoGar3.GL873787                   805653 29 -   1219906 I
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=2563.000000
s hg38.chr14_KI270722v1_random        91667 3 +    194050 gta
s panTro4.chr3                    125177675 3 - 202329955 gta
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816901 3 - 202140232 gta
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513805 3 -  28733288 gta
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482652 3 - 155834243 aca
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873787                   805682 3 -   1219906 ATA
i otoGar3.GL873787                I 29 I 12
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_142441.1-80344     13147 0 -     80344 C
e panPan1.JH650580                 19655959 279 -  19803153 I
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=3460.000000
s hg38.chr14_KI270722v1_random        91670 13 +    194050 gcggggttttttG--
s panTro4.chr3                    125177678 13 - 202329955 gcggagttttttG--
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816904 13 - 202140232 gcagggttttttG--
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513808 13 -  28733288 gCGGGGTTTTTTG--
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482655 11 - 155834243 g--aggtttttGG--
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13147  7 -     80344 --------TCCCACA
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19655959 279 -  19803153 I
e otoGar3.GL873787                   805685 12 -   1219906 I
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=2100.000000
s hg38.chr14_KI270722v1_random        91683 1 +    194050 G
s panTro4.chr3                    125177691 1 - 202329955 G
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816917 1 - 202140232 G
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513821 1 -  28733288 G
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482666 1 - 155834243 G
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873787                   805697 1 -   1219906 G
i otoGar3.GL873787                I 12 I 38
s tupBel1.scaffold_142441.1-80344     13154 1 -     80344 G
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19655959 279 -  19803153 I
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=-3608.000000
s hg38.chr14_KI270722v1_random        91684 11 +    194050 TTATGATCATT----
s panTro4.chr3                    125177692 11 - 202329955 TCATGATCATT----
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816918  1 - 202140232 T--------------
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513822  1 -  28733288 T--------------
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482667 11 - 155834243 TCATGATTGTT----
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13155  9 -     80344 ------TCATTCATT
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19655959 279 -  19803153 I
e otoGar3.GL873787                   805698 38 -   1219906 I
e gorGor3.chr3                    122214753 279 - 199944510 I
e papAnu2.chr9                      3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=3928.000000
s hg38.chr14_KI270722v1_random        91695 4 +    194050 CATT
s panTro4.chr3                    125177703 4 - 202329955 CATT
i panTro4.chr3                    C 0 C 0
s panPan1.JH650580                 19656238 4 -  19803153 CATT
i panPan1.JH650580                I 279 I 1305
s gorGor3.chr3                    122215032 4 - 199944510 CATT
i gorGor3.chr3                    I 279 I 1304
s calJac3.chr7                    120482678 4 - 155834243 TGTT
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13164 4 -     80344 TATT
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e ponAbe2.chr3                    159816919 0 - 202140232 C
e otoGar3.GL873787                   805698 38 -   1219906 I
e papAnu2.chr9                      3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I
e nomLeu3.chr24                    27513823 0 -  28733288 C

a score=2899.000000
s hg38.chr14_KI270722v1_random        91699 22 +    194050 TATCTCACAGTTCATTCTCGTT
s panTro4.chr3                    125177707 22 - 202329955 TATCTCACAGTCCATTCTCATT
i panTro4.chr3                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13168 22 -     80344 TATTTTTTACTTGATTCTGATC
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e calJac3.chr7                    120482682  0 - 155834243 C
e ponAbe2.chr3                    159816919  0 - 202140232 C
e panPan1.JH650580                 19656242 1305 -  19803153 I
e otoGar3.GL873787                   805698 38 -   1219906 I
e gorGor3.chr3                    122215036 1304 - 199944510 I
e papAnu2.chr9                      3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I
e nomLeu3.chr24                    27513823  0 -  28733288 C

a score=-2155.000000
s hg38.chr14_KI270722v1_random        91721 4 +    194050 --AC-TT
s panTro4.chr3                    125177729 5 - 202329955 --ACGTT
i panTro4.chr3                    C 0 C 0
s otoGar3.GL873787                   805736 2 -   1219906 -----tc
i otoGar3.GL873787                I 38 n 38
s tupBel1.scaffold_142441.1-80344     13190 4 -     80344 ACAC---
i tupBel1.scaffold_142441.1-80344 C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e calJac3.chr7                    120482682 0 - 155834243 C
e ponAbe2.chr3                    159816919 0 - 202140232 C
e panPan1.JH650580                 19656242 1305 -  19803153 I
e gorGor3.chr3                    122215036 1304 - 199944510 I
e papAnu2.chr9                      3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I
e nomLeu3.chr24                    27513823 0 -  28733288 C

a score=50172.000000
s hg38.chr14_KI270722v1_random        91725 95 +    194050 GGGCCAGGGTCATGATCATTCATTATCTCTCAGTTCATCCTCATTACGTTG-----GGCAAACAGTCATGCTGCAGGGTACAGATTATGTTATTCTGTTA
s panTro4.chr3                    125177734 95 - 202329955 GGGCCAGGGTCATGATCATTCATTATATCACAGTTCATCCTCATTACGTTG-----GGCAAACAGTCATGCTGCATGGTATAGATTATGTTATTCTGTTA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159816919 85 - 202140232 ----------CATGATCATTCATTATCTCACAGTTCATCCTCATTATGTTG-----GGCAAACAGTCATGCTGCAGGGTATAGATTATGTTATTCTGTTA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27513823 85 -  28733288 ----------CATGATCATTCATTATCTCACAGTTCATCCTCATTACGTTG-----GGCAAACAGTCATGCTGCAGGGTATAGATTATGTTATTCTGTTA
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120482682 77 - 155834243 -----------------------TATTTCACAGTTTATTCTCATTACATTGGGCCAGGCAAACAGTCATGCAGCATTGTATAGGTTATGTTATTCTGGTA
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_142441.1-80344     13194 48 -     80344 AGGGCTGGGAAATG---------TATGCACCAGCT---------------------GG---ACAACTCTGCTA---------------GCCATTGT----
i tupBel1.scaffold_142441.1-80344 C 0 N 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19656242 1305 -  19803153 I
e otoGar3.GL873787                   805738 38 -   1219906 I
e gorGor3.chr3                    122215036 1304 - 199944510 I
e papAnu2.chr9                      3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225501947 46117 - 229590362 I

a score=975597.000000
s hg38.chr14_KI270722v1_random     91820 1181 +    194050  
s panTro4.chr3                 125177829 1183 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159817004 1179 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27513908 1177 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120482759 1149 - 155834243  
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19656242 1305 -  19803153 I
e otoGar3.GL873787                805738   38 -   1219906 I
e gorGor3.chr3                 122215036 1304 - 199944510 I
e papAnu2.chr9                   3415648    2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=2100.000000
s hg38.chr14_KI270722v1_random     93001 1 +    194050 g
s panTro4.chr3                 125179012 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19657547 1 -  19803153 G
i panPan1.JH650580             I 1305 I 418
s gorGor3.chr3                 122216340 1 - 199944510 g
i gorGor3.chr3                 I 1304 I 425
s ponAbe2.chr3                 159818183 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27515085 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120483908 1 - 155834243 g
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873787                805738 38 -   1219906 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=325250.000000
s hg38.chr14_KI270722v1_random     93002 420 +    194050 ccttttaccctgttggttgtgacctttgaggtacagaagtttttaagtttg----atatatttttgcttttactgcctgagcttttaatgtcatatcctaaaaattattgacaaattcatcatcataaagcattttccaaatttgttttccctaggagtttgatagttgtagttttacatttaggtttataattcactttgaattaattttaacgtggtgtaaggtaagggtccaacatcattgttttgcatgtagatatacaattttcccaacaccatttgttgaagaaactgtccttcaccattgagtggtcttggcatccttgtggaagatcatcagaccatatatgccagggttggtttctaaggtctctgttgtgttggtccataagtgtgtcaagtgtgtctttatgccatgaccaca
s panTro4.chr3                 125179013 418 - 202329955 ccttttaccctgttggttgtgacctttgaggtacagaaacttttaggtttg----ctacgtttttgcttttactgcctgagcttttaatgtcatatcctaaaaattattgacaaattcattgtcgtaaagcattttccaaatttgttttccctaggagtttgataattctagtttcacatttaggtttataattcactttgaattaattttaacgtggtgtaaggtaagagtccaaattcattgttttgcatgtggatatacagttttcccaacaccatttgttgaagaaactgtccttcaccattgagtggtcttggcatccttgtggaagatcattggaccctatatgccaggtttggtttatgaggtatctgttgtgttggtccataagtttgtc--gtgtgtctttatgtcatgaccaca
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159818184 420 - 202140232 ccttttactctgttggttgtgacctttgaggtacagaagcttttaggtttg----atctatttttgcttttactgcctgagcttttaatgtcatatcctaaaaattattgacaaattcattgtcataaagcattttcaaaatttgttttccctaggagtttgatagttctagttttacatttaggtttataattcactttgaattaattttaacatggtgtaaggtaagagtccaacttcattgttttgcatgtggatgtacaattttcccagcaccatttgttgaagaaactatccttcaacattgagtggccttggcatccttgtggaagatcattggaccatatatgccagggttggtttctgaggtctctgttgtgttagtccataagtgtgtcaagtgtgtctttatgccatgaccaca
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27515086 420 -  28733288 tcttttactctgttggttgtgacctttgaggtacagaagcttttaggtttg----atctatttttgcttttactgcctgagcttttaatatcatatcctaaaaattattgacaaattcattgtcataaagcattttccaaatttgttttccctaggagtttgatagttctagttttacatttaggtttataattcactttgaattaattttaacgtggtgtaaggtaagagtccaacttcattgttttgcatgtggatatacaattttcccaacaccatttgttgaagaaactgtccttcaccattgagtggtcttggcatccttgtggaagatcatcggaccatatatgccagggttggtttctgaggtctctgttgtgttggtccataagtgtgtcaagtgtgtctttatgccatgaccaca
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120483909 410 - 155834243 ccttttattgtgttgattgtgacctttgaggt-cagaagcttttaggtttgatctatctatttttgtttttactgcctgagcttttaatgtcatagcctaaaatttattgaaaaatttattgtcgtaaaacattttcc-aattttttttccctaggagttttat-gttctactcttacatttaggtttataattaactgtgagttggttttaacacggtataaggtaagagtctgactacattgctctgcatgtggatatccagtcttcccaacaccatttgttgaagaaactgtctttcaccattgagtggtctggaca-ccctgtggaagatcatcagaccatatatgccagggttgattta-gagatctctattctgttggtccataa---------gtgtgtctttatgccgctgccaca
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657548 418 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122216341 425 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=755.000000
s hg38.chr14_KI270722v1_random     93422 1 +    194050 t
s panTro4.chr3                 125179431 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19657966 1 -  19803153 t
i panPan1.JH650580             I 418 I 24632
s ponAbe2.chr3                 159818604 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27515506 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120484319 1 - 155834243 c
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122216341 425 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=4604.000000
s hg38.chr14_KI270722v1_random     93423 6 +    194050 tttttt
s panTro4.chr3                 125179432 6 - 202329955 tttttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159818605 6 - 202140232 tttttt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27515507 6 -  28733288 tttttt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120484320 6 - 155834243 tatttt
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122216341 425 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=2730.000000
s hg38.chr14_KI270722v1_random     93429 2 +    194050 tt
s panTro4.chr3                 125179438 2 - 202329955 tt
i panTro4.chr3                 C 0 I 3
s gorGor3.chr3                 122216766 2 - 199944510 tt
i gorGor3.chr3                 I 425 I 1956
s ponAbe2.chr3                 159818611 2 - 202140232 tt
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27515513 2 -  28733288 tt
i nomLeu3.chr24                C 0 I 8
s calJac3.chr7                 120484326 2 - 155834243 tt
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=415569.000000
s hg38.chr14_KI270722v1_random     93431 535 +    194050  
s panTro4.chr3                 125179443 535 - 202329955  
i panTro4.chr3                 I 3 C 0
s ponAbe2.chr3                 159818614 527 - 202140232  
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27515523 525 -  28733288  
i nomLeu3.chr24                I 8 C 0
s calJac3.chr7                 120484328 534 - 155834243  
i calJac3.chr7                 C 0 I 2551
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122216768 1956 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=405888.000000
s hg38.chr14_KI270722v1_random     93966 817 +    194050  
s panTro4.chr3                 125179978 832 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159819141 823 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27516048 822 -  28733288  
i nomLeu3.chr24                C 0 I 332
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120484862 2551 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122216768 1956 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=303985.000000
s hg38.chr14_KI270722v1_random     94783 588 +    194050  
s panTro4.chr3                 125180810 585 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159819964 585 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27517202 587 -  28733288  
i nomLeu3.chr24                I 332 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120484862 2551 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122216768 1956 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=300.000000
s hg38.chr14_KI270722v1_random     95371 1 +    194050 g
s gorGor3.chr3                 122218724 1 - 199944510 g
i gorGor3.chr3                 I 1956 I 795
s nomLeu3.chr24                 27517789 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120484862 2551 - 155834243 I
e ponAbe2.chr3                 159820549 0 - 202140232 C
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e panTro4.chr3                 125181395 0 - 202329955 C
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=67559.000000
s hg38.chr14_KI270722v1_random     95372 195 +    194050 tttttttttttcct---ttttttctggtcttattctgcttatctctgctctaatctgttattttcttcgttttgcttggtttgtcattagtttttatttttcccttacaggtgtaatgttaggttattgatttgagatctttcttctttttaatttaagcat--------------------------------------------------------ctgcagctgtaagcttccctttagcatgggtttGAG
s panTro4.chr3                 125181395 137 - 202329955 tttttttttttcctttcttttttctggtcttattctgcttatctctgctctaatctgttattttcttccttttgcttggtttgtcattagttt---tttttccctt-caggtgtaatgttaggttattgatttgagatctt-----------------------------------------------------------------------------------------------------------------
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159820549 193 - 202140232 --tttctttttccttt-ttttttctggtcttattctgcttatctctgctctaatctgttattttcttccttttgcttggtttgtcattagttttt-tttttccctt-caggtgtaatgttagattattgatttgagatctttcttctttttaatttaagcac--------------------------------------------------------ctgcagctataagcttccctttagcatgggtttgag
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27517790 247 -  28733288 -ttttttttttcctt--tttttcctggtcttatactgcttatctctgctctaatctgttattttcttccttttgcttggtttgtcattagttt---tttttccctt-caagtgtaatgttaggttattgatttgagatcttctttctttttaatttaagcacctgcagctgtaagcttcctttagcatgggtttgagatctttcttctttttaagtatctgcagctgtaagcttccctttagcatgggtttgag
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120484862 2551 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122218725 795 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=27140.000000
s hg38.chr14_KI270722v1_random     95567 113 +    194050 ----Atcttctttttaatttaagcatctgcagctataagcttccctttagcatgggtttgagatctttcttctttttaatttaagcatctgcagctgtaagcttccctttagcatgt
s panTro4.chr3                 125181532 112 - 202329955 -----tcttctttttaatttaagcacctgcagctataagcttccctttagCAtgggtttgagatctctcttcttttcaatctaagcatctgcagctgtaagcttccctttagcatgg
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27518037 116 -  28733288 atctttcttctttttaatttgagcatctgcagctgtaagctt-cctttagcatgagtttgagatctttcttctttttaacttaagcatctgcagctataagcttccctttagcatgg
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120484862 2551 - 155834243 I
e ponAbe2.chr3                 159820742   0 - 202140232 C
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122218725 795 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=2383.000000
s hg38.chr14_KI270722v1_random     95680 7 +    194050 atttcaa
s panTro4.chr3                 125181644 7 - 202329955 gtttgag
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27518153 7 -  28733288 gtttgag
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120487413 7 - 155834243 atttgag
i calJac3.chr7                 I 2551 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e ponAbe2.chr3                 159820742 0 - 202140232 C
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122218725 795 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=144755.000000
s hg38.chr14_KI270722v1_random     95687 185 +    194050 atctttcttctttttaatttaagcatctgcagctgtaagcgtccctttagcactgcctttgttgccttctcctgagtttgggtatgtcatggttttgttttcattagcttgaaca-tttttttgtcctattgtaatataattgtGTTGTTTTTAATAAAGGTAATTAATGAAACACATAATGAATT
s panTro4.chr3                 125181651 184 - 202329955 atctttcttctttttaatttaagcatctgcagctgtaaccttccctttagcactgcctttgttgcctcctcctgagtttgggtatgtcatgattttgttttcatttgcttaaaca--ttttttGTCCTATTGTAATACAATTGTGTTGTTTTTAATAAAGGTGATTAATGAAACACATAATGAATT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159820742 180 - 202140232 atctttcttctttttaatttaagcatctgcagctgtaagcctccctttagcactgcctttgttgcctccttctgagtttgggtatgtcatggttttgttttcatttgctta------ttttttgtcctattgtaatATAATTGCATTGTTTTTAATAAAGATGATTAATGAAACACATAATGGATC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518160 185 -  28733288 atctttcttctttttaatttgagcatctgcacctgtaagcttccctttatcaccatgtttgttgcctcctcctgagtttgggtatgtcatggttttgttttcatttgcttaaaca-tttttttgtcctattgtaatATAATTGTATTATTTTTAATAAAGGTGATTAATGAAACACATAATGAATT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120487420 186 - 155834243 attgttcttctttttaatttaagcacctacagctgtaagtttccctttagcactgcttttgttgcctccctgtgagtttgggtatgtcatggttttgttttcatttgcttaaacattttttttgtcttcctgtaatATAATTGCATTGTTTTTAACAAAGGTGATTAATGAAACACATAATGAATT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122218725 795 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1500.000000
s hg38.chr14_KI270722v1_random     95872 1 +    194050 G
s panTro4.chr3                 125181835 1 - 202329955 G
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159820922 1 - 202140232 G
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518345 1 -  28733288 G
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120487606 1 - 155834243 G
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE942587v1              479132 1 -    594416 G
i tarSyr2.KE942587v1           N 0 I 62
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122218725 795 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=270609.000000
s hg38.chr14_KI270722v1_random     95873 362 +    194050 TGCTTCTGTTTTTATAATATTTTGAGCATTCTTAACTCAGAAATGTAAATTTTAGAAAAAAAATCCAggccaggcacagtggctcacacctgtaatcccagcacttggggagaccgaggtgggtggatcatctgaggtcaggagttggagaccagcctggccaacatggtgaaaccctgtctttactaaaaataaaaaatatatatataaaagttagccgggtgtcatggcgggtgcctgtaatcccagatattctggaggctgaggcaggagaatcacttgattctgggaggcgaagtttgcagtgagctgagattgcaccactgcactccagcctgggtgacagaacgagagtccatctc
s panTro4.chr3                 125181836 361 - 202329955 TGCTTCTGTTTTTATAATATTTTAAGCATTCTTAACTCAGAAATGTAAACTTTAGAAAAAAATTCCAggctaggcacagtggctcacacctgcaatcccagcactttgggaggcctaggcgggcagatcatctgaggtcaggagttggagaccagcctggccaacatggtgaaaccctgtctttactaaaaatagaaaa-aaaaaaataaaagttagctgggtgtcgtggcggatgcctgtaatcccagctactgtggaggctgaggcaggacaatcacttgaatctgggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctcagtgacagagtgagactccgtctc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159820923 355 - 202140232 TGCTTCTCTTTTTATAATATTTTAAGCATTCTTAACTCAGAAATGTAAACTTTAGAAAAAAATTCCAggccaggcacagtggttcacacctgtaatcccagcactttgggaggctgaggtaggcagatcatctgaggtcaggagttggagaccagtctggccaacatggtgaaaccctgtctttactaaaaatagaaaa-aaaaatataaa----agctgggtgtggtggcgggtgcctgtaatcccagctactctggaggctgaggcaggagaatcacttgaatctgggaggcagagtttgcagtgagctgagattgcactactgcactccagcctgggcgacag--tgagactccatctc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518346 360 -  28733288 TGCTTCTGTTTTTATAATATTTTAAGCATTCTTAACTCAGAAATGTAAACTTTAG--AAAAATTCCAGTccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcaggagttggagaccagccttgctaacatggtgaaacgctgtctttactaaaaatggaaaaaaaatttttaaaagttagcttggtgtggtggcaggcgcctgtaatcccagctactctggaggcttaggcaggagaatcacttcaatctgggaggcggaggttgcagtgagctgagattgcaccactgcactccagcctgggtgacagagtaagactctgtctc
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120487607 351 - 155834243 TGCTTTGTTTTTTATAATATTTTAAGCATTTTTAACTCAGAAATGTAAACTTTAGAAAAATATTCCATgccaggagcagtggctcacacctgtaatcccagcactttgggaggctgagatgggtggatcacctgaggtcaggagtttgagaccagcctgacca--------aaatcctgtctttactaaaaatacaaaa---aaatacaaaagttatatgggtgtggtggtgggtacctgtaatcccagctactctggagcctgaggcaggagaatcaattgaacctgggaggcggaggttgcagtgagctgagattgtaccactgcactccagcctgggtgacagagtgagactttgtctc
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e tarSyr2.KE942587v1              479133  62 -    594416 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122218725 795 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1365.000000
s hg38.chr14_KI270722v1_random     96235 1 +    194050 a
s panTro4.chr3                 125182197 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122219520 1 - 199944510 a
i gorGor3.chr3                 I 795 I 764
s ponAbe2.chr3                 159821278 1 - 202140232 a
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27518706 1 -  28733288 a
i nomLeu3.chr24                C 0 I 2
s calJac3.chr7                 120487958 1 - 155834243 a
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e tarSyr2.KE942587v1              479133 62 -    594416 I
e otoGar3.GL873787                805738 38 -   1219906 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=10821.000000
s hg38.chr14_KI270722v1_random     96236 22 +    194050 aaaaaaa--aagaaa-aa-aaaaTTT
s panTro4.chr3                 125182198 25 - 202329955 aaaaaaaagaagaaagaa-aaaaTTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821280 25 - 202140232 aaaaaaaagaaaaaagaa-aaCATTT
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27518709 25 -  28733288 aaaaaaaagaaaaaagaa-aaCATTT
i nomLeu3.chr24                I 2 C 0
s calJac3.chr7                 120487959 18 - 155834243 --------gaaaaaagaacaaaaTTT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e tarSyr2.KE942587v1              479133 62 -    594416 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1500.000000
s hg38.chr14_KI270722v1_random     96258 1 +    194050 C
s panTro4.chr3                 125182223 1 - 202329955 C
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821305 1 - 202140232 C
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518734 1 -  28733288 C
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120487977 1 - 155834243 C
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE942587v1              479195 1 -    594416 C
i tarSyr2.KE942587v1           I 62 I 92
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=66173.000000
s hg38.chr14_KI270722v1_random     96259 93 +    194050 AGACATATTTATATGTATTTCAATTTAGAAACTGTGATCTCCTAAGTGTATTGACACAGCAACCTGACATAAAGATAAAGAATAATAAGCATA
s panTro4.chr3                 125182224 87 - 202329955 AGACATATTTATATGTATTTCAATTTAGAAACTATGATCTCCTAAGTGTATTGACACAGCAACCTGACATAAAGATA------AATAAACATA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821306 93 - 202140232 AGACACATTTATATGTATTTCAATTTAGAAACTATGATCTCCTAAGTGTATTGACACAGCAACCTGACATAAAGATAAAGAATAATAAACATA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518735 87 -  28733288 AGACATATTTATATGTATTTCAATTTAGAAACTATGATCTCCTAAGTGTATTAACACAGCAACCTGACATAAAGA------ATAATAAACATA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120487978 74 - 155834243 AGACATATTTATATGTATTTCAATTTAGAA-------------AAGTGTATTGACACAGCAACCTGACATAAAGA------ATAATAAACATA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e tarSyr2.KE942587v1              479196 92 -    594416 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1899.000000
s hg38.chr14_KI270722v1_random     96352 3 +    194050 TAA
s panTro4.chr3                 125182311 3 - 202329955 TAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821399 3 - 202140232 TAC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518822 3 -  28733288 TAC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120488052 3 - 155834243 TAC
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE942587v1              479288 3 -    594416 CAA
i tarSyr2.KE942587v1           I 92 I 62
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=50051.000000
s hg38.chr14_KI270722v1_random     96355 66 +    194050 CAAAATGGAAACTTGCAAATACCTGTTATTTATTAATTTTTAATTATATATATTTAAAAATTgcca
s panTro4.chr3                 125182314 66 - 202329955 CAAAATGGAAACTTGCAAATACCTGTTTTTCattaatttttaattatatctatttaaaaattgcca
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821402 66 - 202140232 CAAAACGGAAACTTGCAAATACCTGttttttattaatttttaattatatatatttaaaaattgctg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518825 66 -  28733288 CAAAACAGAAACTTGCAAATACCTGTTTTTTATTAATTTTTAATTACCTATATTTAACAATTgcca
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120488055 66 - 155834243 CAAATCAGAAACTTGCAAATATCTGGtttttattaattttttattacatatacttaaaaattgctg
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e tarSyr2.KE942587v1              479291 62 -    594416 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=1500.000000
s hg38.chr14_KI270722v1_random     96421 1 +    194050 g
s panTro4.chr3                 125182380 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821468 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518891 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120488121 1 - 155834243 g
i calJac3.chr7                 C 0 C 0
s tarSyr2.KE942587v1              479353 1 -    594416 G
i tarSyr2.KE942587v1           I 62 N 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=231370.000000
s hg38.chr14_KI270722v1_random     96422 290 +    194050 gttcagtggcttacacctgtaatcccagcactttgggaggctgaggtgggcagatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaacctcatctctattaaaaac-caaaaaattagtcagacgtgatagcatgcatctgtagtcccagctacttgggagactaaggcaggagacttgcttgaacatgggaggcagaggttgcagtgagccaagatagtgccactgcactccagcctgggtgacaga---gtgagactctgtctcaaaaaaataaaaaT
s panTro4.chr3                 125182381 290 - 202329955 gtgcagtggcttacacctgtaatcccagcactttgggaggctgaggtgggcagatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaatcccatctctattaaaaat-caaaaaattagccaggtgtgatagcatgcatctgtagtcccagctactcaggagcctgaggcgggagaattgcttgaacctgggaggcagaggttgcagtgagccaagatagtgccactgcgctccagcctgggtgacaga---atgagactctgtctcaaaaaaataaaaaT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821469 290 - 202140232 gtgcagtggcttatgcctgtaatcccagcattttgagatgctgaggtgggcagatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaacctcatttctattaaaaat-caaaaaattagccaggtgtgatagcatgcatctgtagtcccagctactcgggagcctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccaagatagtgccactgcactgcagcctgggtgacaga---gtgagactctgtctcaaaaaaataaaaaT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27518892 287 -  28733288 gtgcagtggcttacgcctgtaatcccagcactttgggaggctgagttgggcagatcacatgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctattaaaaat-caaaaaattagccaggtgtgatagcatgcatctatagtcccagctacttgggagcctaaggc---agaattgcttgaacctgggaggcagaggttgcagtgagccaagatagttccactgcactccagcctgggtgacaga---gtgagactctgtgtcaaaaaaataaaaaT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120488122 294 - 155834243 ctgcggtggctcatgcctgtaatcccagcactttgggaggccaagatgggcagatcatatgacttcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaagacaaaaaactagccaggtgtggtggcatgcgtccgtagtcccagctacttaagagactgaggcaggaaactcacttgaacctagagggaagaggttgcagtgagcaaagatagtgccacggcgctctggccttggtgacagagtggtgagactctgtctcaaaaaagtaaaaat
i calJac3.chr7                 C 0 I 4692
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=61586.000000
s hg38.chr14_KI270722v1_random     96712 123 +    194050 TGCctgggtgcagtggctcacacctgtaatcgcagcactttgggaagctgaggcaggcagatcacgtcaggaaatcgagaccatccgggctaacatggtgaaacgccatctctactaaagata
s panTro4.chr3                 125182671 123 - 202329955 TGCctgggtgtggtggctcacacctgtaatcgcagcactttgggaggctgaggcaggcagatcatgtcaggagttcgagaccatccgggctaacatggtgaaacgctgtatctactaaaaata
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821759 123 - 202140232 TGCctgggcacagtggctcacacctgtaatagcagcactttgggaggctgaggcaggcagatcatgtgaggagattgagaccatccgggctaacacagtgaaacgccgtctctactaaaaata
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27519179 123 -  28733288 TGCctgggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggcaggcagatcatgtcaggatatcgagaccatccgggctaacatggtgaaacgccgtctctactaaaaata
i nomLeu3.chr24                C 0 I 14251
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=16977.000000
s hg38.chr14_KI270722v1_random     96835 79 +    194050 caaaaaattacctgggcgtgttggtgggtgcctgtagttccagctactccggaggttgagtcaggagaatggtgtgaac
s panTro4.chr3                 125182794 79 - 202329955 gaaaaaattagcggggcgttgtggtgggtgcctgtagttctagctactccagaggttgaggcaggagaatggtgtgaac
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159821882 78 - 202140232 caaaaaattagccgggcatggtggcaggtgcctgtagttccagctact-aggaggctgaggcaggagaatggtgtgaac
i ponAbe2.chr3                 C 0 I 14072
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27519302 14251 -  28733288 I

a score=7365.000000
s hg38.chr14_KI270722v1_random     96914 96 +    194050 ctgggaggtagagcttgcagtgagccgagatggcaccactggactccagcctgggtgacagagcaagactctgtctc-aaaataaaataaaataaaT
s panTro4.chr3                 125182873 97 - 202329955 ctgggaggtggagcttgcagtgagccgagattgcgccagtggactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaataaaataaaa
i panTro4.chr3                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e ponAbe2.chr3                 159821960 14072 - 202140232 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122219521 764 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27519302 14251 -  28733288 I

a score=24121.000000
s hg38.chr14_KI270722v1_random     97010 96 +    194050 Ctaaggtgtggttgacatacaaaaattacacatatttaatatacaccttatgtgttt--gtgtgtgtgtgtgtatgtgtgtgacagaggttttactct
s panTro4.chr3                 125182970 96 - 202329955 ttaaggtgtggttgacatacaaaaattacacatatttaatatataccttgtgtgtgt--gtgtgtgtgtgtgtgtgtgtgtgacggaggttttactct
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122220285 98 - 199944510 ttaaggtgtggttgacatacaaaaattacacatatttaagatatacCTtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgACGGAGGTTTTACTCT
i gorGor3.chr3                 I 764 I 23009
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e ponAbe2.chr3                 159821960 14072 - 202140232 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27519302 14251 -  28733288 I

a score=363735.000000
s hg38.chr14_KI270722v1_random     97106 4402 +    194050  
s panTro4.chr3                 125183066 4422 - 202329955  
i panTro4.chr3                 C 0 I 14357
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e ponAbe2.chr3                 159821960 14072 - 202140232 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738   38 -   1219906 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648    2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27519302 14251 -  28733288 I

a score=0.000000
s hg38.chr14_KI270722v1_random    101508 24753 +    194050  
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416  4692 - 155834243 I
e ponAbe2.chr3                 159821960 14072 - 202140232 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738    38 -   1219906 I
e panTro4.chr3                 125187488 14357 - 202329955 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648     2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I
e nomLeu3.chr24                 27519302 14251 -  28733288 I

a score=85998.000000
s hg38.chr14_KI270722v1_random    126261 1411 +    194050  
s nomLeu3.chr24                 27533553 1616 -  28733288  
i nomLeu3.chr24                I 14251 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e ponAbe2.chr3                 159821960 14072 - 202140232 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738   38 -   1219906 I
e panTro4.chr3                 125187488 14357 - 202329955 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648    2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=29760.000000
s hg38.chr14_KI270722v1_random    127672 160 +    194050 agtgttctggtattctatgtgagggacagacatt-cagacccc-agcatcagtgttctggaatcctgtgtg-agggacaaacattcagaccccaggagcagtgtt-ctgaaatcctaggttaaggataaacattcagacccc-agcatcaatgttatggaatcct
s ponAbe2.chr3                 159836032 164 - 202140232 agtgttctggaatcctatgtgagggacaggcatttcagacccccagcagcagtgttctgaaatcctatgtttaaaggcaaacattcggaccccagcatcaatgtttctggaatcctatgtgagggacaaacattcagaccct-catagcagtgttctggaatcct
i ponAbe2.chr3                 I 14072 C 0
s nomLeu3.chr24                 27535169 157 -  28733288 agtgttctggaattctatgtgaggcagaaacatt-cagacccc-agcagcagtgttctggaatcctatgtg-aggg----acattctgaccccagcagcagtgtt-ctggaatcctatgtgagggacaaacgttcagaccccaagcatcaatgttctggaatcct
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738  38 -   1219906 I
e panTro4.chr3                 125187488 14357 - 202329955 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=44739.000000
s hg38.chr14_KI270722v1_random    127832 98 +    194050 ttgtaagggacaaacattcagaccttcatagcagtgttctggaatcttatgtgagggagaaacattcagacctcaggagcagcgttttggtaccatat
s panTro4.chr3                 125201845 98 - 202329955 Ttgtgagggacaaacattcagaccctcgtagcagtgttgtggaattctatgtgagggagaaacattcagacctcaggagcagtgttttggtatcatat
i panTro4.chr3                 I 14357 C 0
s ponAbe2.chr3                 159836196 94 - 202140232 atgtgacggacaaa----cagacccttgtagcagtgttatggaatcctatgtgagagagaaacattcagacctcaggagcagtgtttgggtattgtat
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27535326 98 -  28733288 atgtgagggacgaacattcagaccctcgtagcagtgttatggaatcctatgtgagggacaaacattcagacctcaggagcagtgttttggtatcgtat
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120488416 4692 - 155834243 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738 38 -   1219906 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=784766.000000
s hg38.chr14_KI270722v1_random    127930 1064 +    194050  
s panTro4.chr3                 125201943 1063 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159836290 1059 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27535424 1034 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120493108 1052 - 155834243  
i calJac3.chr7                 I 4692 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873787                805738   38 -   1219906 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648    2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=-2200.000000
s hg38.chr14_KI270722v1_random    128994 1 +    194050 -c
s panTro4.chr3                 125203006 1 - 202329955 -c
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159837349 1 - 202140232 -g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27536458 1 -  28733288 -c
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120494160 1 - 155834243 -c
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                989333 1 -   1077187 G-
i otoGar3.GL873804             T 21594 I 585
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=4674.000000
s hg38.chr14_KI270722v1_random    128995 8 +    194050 tttagttt-
s panTro4.chr3                 125203007 8 - 202329955 tttagttt-
i panTro4.chr3                 C 0 I 1
s ponAbe2.chr3                 159837350 8 - 202140232 tttagttt-
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27536459 8 -  28733288 tttagttt-
i nomLeu3.chr24                C 0 I 307
s calJac3.chr7                 120494161 9 - 155834243 ttcagcttt
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989334 585 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=195651.000000
s hg38.chr14_KI270722v1_random    129003 256 +    194050 gatctctcttctgaaccactggagctatattcccaattgccagttgaacattcccacatatggaacgtcagatgtttcacacatgagatgtccaggtctgtgtcacttctggttatcatattcttttaatttttttgcaaatttcacttcacagcaccagtaccaaactagc-tggatcagggcagataacttggaaacaaaactcccgtttttacccac-tgcacagtaaattggtaccaaatcctgtttctacatt
s panTro4.chr3                 125203016 254 - 202329955 gatctctcttctgaaccactggagccattttcccagttgccagttggacattcccacatatggaacctcagatgtttcacacatgatatgtccaagcctgTGTCACTTCTGGTTATTGTATTCTTTTA--TTTTTTGCAAATTTCACTTCACAACACCAGTACCAAACTAGC-TGGATCATGGCAGATAACTTGGAAACAAAACTCCCCTTTTTACCCAC-TGCACAGCAAATTGGTACCAAATCCTGTTTCTACATT
i panTro4.chr3                 I 1 C 0
s ponAbe2.chr3                 159837359 250 - 202140232 gatctcttttctgaaccactggagccatattcccaattgccagttggacattccca-atatggaatctcagatgtttcacacatgatatgtccaagtctgtgtcacttctggttatcatattctttta---tttttacaaatttcacttcacaacaccagtaccaaactagc-tggatcatggcagataacttggaaac--aactcccctttttacccac-tgcacaggaaattggtaccaaatcctgtttctacatt
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27536774 252 -  28733288 gatctctcttctgaaccactggagccatattcccaattgccagttggaaattccca-atatggaacctcagatgtttcatacgtgatatatccgagtctgtgtcacttctggttatcatattctttca---tttttacaaatttcacttcacaacaccagtaccaatctagc-tggatcatggcagataacttggaaacaaaactcccctttttacccac-tgcacagcaaattggtaccaaatcctgtttctacatt
i nomLeu3.chr24                I 307 C 0
s calJac3.chr7                 120494170 256 - 155834243 cctctctctcctgaacctctggaaccatattcccaattgcccgttggagattcccacATATGGACCCTCAAATGTTTCACACATGATGTGTCTAAGTCTATGTCACTTTTGGTTATCATATTCTTTTA-TTTTTTAACAAATTTCACTTCACAACACCAGTG-CAAACTAGCTTGGATCATGGCAGATAATTTGGAAGTAAAACTCCCCTTTTTACCCTCTTGCACAGCAAATTGGTACCAAAGCCTGTTTCTACATT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989334 585 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=234099.000000
s hg38.chr14_KI270722v1_random    129259 248 +    194050 TTTTTCCTTTTAAGAACTGCTTCCCTATTGTGTATTCTTAC-ACTCCGTGTCCTCATGTACTGATGTAGGTGGTCGTCTGtcttcctc-tttact-cccttctggctttcccttaagccctttcccattctctttcTCAGGGATGGCTGTTAAAATGCCAATATGGTCATGTAACTTTTCTGTCCTTACTGGACCTCCTTATTTACACCT----GTTTGTGAAGTGGCTGTGTTCACCCTGG-GTGGATACAGAAA
s panTro4.chr3                 125203270 240 - 202329955 TTTTTCCTCTTAAGAACTGCTTCCCTATTGTGTATTCTTAC-ACTCCATGTCCT--------GATGTAGGTGGTCATCTGTCTTCCTC-TTTACT-CCCTTCTGGCTTTCCCTTAAGCCCTTTCCCATTCTCTTCCTCAGGGATGGCTGTTAAAATGCCAATATGGTCATGTAACTTTTCTGTCCTTACTGGACCTCCTTATTTACACCT----GTATGTGAAGTGGCTGTGTTCACCCTGG-GTGGATACAGCAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159837609 240 - 202140232 TTTTTCCTTTCAAGTACCTTTTCCCTATTGTGTATTCTCAC-ACTCCATGTCCT--------AATGTAGGTGGTCATCTGTCTTCCTC-TTTACT-CCCTTCTGACTTTCCCTTAAGCCCTTTCCCATTCTCTTTCTCAGGGATGGCTGTTAAAATGCCAATATGGTCATGTAACTTTTCTGTCCTTACTGGACCTCCTTATTTACACCT----GTTTGTGAAGTGGCTGTGTTCACCCTAG-GTGGATACAGCAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27537026 240 -  28733288 TTTTTCCTTTTAAGAACTGCTCCCTTATTGTGTATTCTTAC-ACTTCATGTCCT--------GATGTAGGTGGTCATCTGtcttcctc-tttact-cccttctgactttcccttaagccctttcccattctctttctcAGGGATGGCTGTTAAAATGCCAATATGGTCATGTAACTTTTCTGTCCTTACTGGACCTCCCTATTTACACCT----GTTTGTGAAGTGGCTGTGTTCACCCTGG-GTGGATAGAGCAA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120494426 240 - 155834243 TTTTGCTTTTC-AGAACTGCTTCCCTATTCCCTGTTCTCACTGCTCTGTGTTCT--------TATGTAGGTGGTCATCTGTCTTTCTCTTTTCCT-CCCTTCTGACTTTCTCTTAAGCCCTTTCCCATTCGCTTTCTCAGGGATGGCTGTTAAAATGTCAGTATGGTCATGTAATTTTTCTGTTCTTACTTGACCTCTTTATTTACACC-----GTTTGTGAAGTAGGTATGTTCACCCTGG-GTGGACACAGCAA
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            79729 243 -    100118 tttttgtttcttAAGATCACTTCTCTAATCTCTATTCCTGCTGCTGTGTTTCCT--------GATGTAGGCGGTCATCCGTCACCGTG-TTTTCTCCCCCTCTGACTTTCCCTTAAGACCATCCCCAT---CGTCCTTAGGAATGACCATTAAAATGAAAATCTAGCCATGTAACCTACTTATTCTTACTGAACCTTATTATTTCTACTCTGTGGTCTG-GGGGTAGGGATGTTCACCCTAGAGTGGACAGAGCAA
i micMur1.scaffold_5252        N 0 M 319
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989334 585 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=505695.000000
s hg38.chr14_KI270722v1_random    129507 693 +    194050  
s panTro4.chr3                 125203510 692 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159837849 690 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27537266 686 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120494666 613 - 155834243  
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e micMur1.scaffold_5252            79972 319 -    100118 M
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989334 585 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=23228.000000
s hg38.chr14_KI270722v1_random    130200 31 +    194050 TGTAATGTAAAAATGATAGGTGCATAAAAAT-
s panTro4.chr3                 125204202 31 - 202329955 TATAATGTAAAAACGATAGGCGCATAAGAAT-
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838539 31 - 202140232 TGTAATGTAAAAATGATAGGTGCATAAGAAT-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27537952 31 -  28733288 TGTAATGTAAAAATGATAGGTACATAAGAAT-
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495279 31 - 155834243 GGTAATGTAAAAATTATAGATGCATGTCATT-
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80298 32 -    100118 TGTAACTTACACACGATATGTGTATAAAGTGG
i micMur1.scaffold_5252        M 319 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989334 585 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225501947 46117 - 229590362 I

a score=10837.000000
s hg38.chr14_KI270722v1_random    130231 7 +    194050 TTTTGAA
s panTro4.chr3                 125204233 7 - 202329955 TTTTGAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838570 7 - 202140232 TTTTGAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27537983 7 -  28733288 TTTTGAA
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548064 7 - 229590362 TTTTGGA
i rheMac3.chr1                 I 46117 C 0
s calJac3.chr7                 120495310 7 - 155834243 TTTTGAA
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80330 7 -    100118 TTCTAGA
i micMur1.scaffold_5252        C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989334 585 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=6986.000000
s hg38.chr14_KI270722v1_random    130238 4 +    194050 ATTA
s panTro4.chr3                 125204240 4 - 202329955 ATAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838577 4 - 202140232 ATTA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27537990 4 -  28733288 ATTA
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548071 4 - 229590362 GTTA
i rheMac3.chr1                 C 0 C 0
s calJac3.chr7                 120495317 4 - 155834243 ATTA
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80337 4 -    100118 ATTA
i micMur1.scaffold_5252        C 0 C 0
s otoGar3.GL873804                989919 4 -   1077187 ATTA
i otoGar3.GL873804             I 585 I 822
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=145672.000000
s hg38.chr14_KI270722v1_random    130242 101 +    194050 AGTCAAATATTTAAATGCAGAATCACTGCATAATCAATTCCTTAAATATTGCATTTAGCTTTCATCACTGCCCAGGATCATTCATCTAGGCATGGTGCTGT
s panTro4.chr3                 125204244 101 - 202329955 CATCAAATATTTAAATGCAGAATCACTGCATAATCAGTTCCTTAAATATTGCATTTAGCTTTCCTCACTGCCCAGGATCATTCATCTAGGCATGGTGCTGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838581 101 - 202140232 GGTAAAATATTTAAATGCAGAATCACTGCATAATCAGTTCCTTAAATATTGCATTTAACTTTCATCACTGCCCAGGATCATTCATCTAGGCATGGTGCTGT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27537994 101 -  28733288 GGTCAAATATTTAAATGCAGAATCACTGCATAATCAGTTCCTTAAATATTGCATTTAACTTTCATCACTGCCCAGGATCATTCATCTAGGCATGGTGCTGT
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548075 100 - 229590362 GGTCAGATATTTACATGCAGACTCACTCCATAATCAGTTCCTTCAGTGTTGTGTTC-TCTCTCATCACAGCCCGGGATCATTCAGCTAGACATGGTGCTGT
i rheMac3.chr1                 C 0 I 473
s calJac3.chr7                 120495321 101 - 155834243 GGTCAAATATTTAAATGCAGAATCACTGCATAATCAATTACTTAAATATTGCATTTAACTTTCATCACTGCCCAGGAGCATTCATCTAGGCATGGTGCTGT
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80341 100 -    100118 CGTCAGTTGAGTAACTACAGGTTTGCTCCATAATCAGTTCCTTCAGCATTGCATCTGCCTCTCAGCACGGACCAGGATCCTTCATCTAAACATGG-GCTGT
i micMur1.scaffold_5252        C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989923 822 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=68073.000000
s hg38.chr14_KI270722v1_random    130343 72 +    194050 CCAGAGTTCCATTAAAGTGGTGTGTGTTCACTTTGCCTTTGTCAGTAGACTTCTGATATTTTCTCATAGTCA
s panTro4.chr3                 125204345 72 - 202329955 CCAGAGTTCCATTAAAGTGGTGTGTGTTCTCTTTGCCTTTGTGAGTAGACTTCTGATACTTTCTCATAGTCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838682 71 - 202140232 CCAGAGTTCCA-TAAAGTGGTGTGTGTTCTTGTTGCCTTTGTGAGTAGACTTCTGATACTTTCTCATAGTCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538095 72 -  28733288 CCAGAGTTCCGTTAAAGTGGTATGTGTTCTTTTTGCCTTTGTGAGTAGACTTCTGATACTTTCTCATAGTCA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495422 72 - 155834243 CCATAGATCCATTAACGTGGTCTGTGTTCTTATTGCCTTTGTGAGTAGACTTCTGATATTGTCTCATAGTCA
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80441 72 -    100118 GTGTCGTTTCACCAACGTGGAGTGTGTTTCTTGTGCCCTTGCAACTGGACTGCTCTTGTTGCCTCACAGTCA
i micMur1.scaffold_5252        C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19657967 24632 -  19803153 I
e otoGar3.GL873804                989923 822 -   1077187 I
e gorGor3.chr3                 122220383 23009 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=2548.000000
s hg38.chr14_KI270722v1_random    130415 1 +    194050 T
s panTro4.chr3                 125204417 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19682599 1 -  19803153 T
i panPan1.JH650580             I 24632 I 98
s gorGor3.chr3                 122243392 1 - 199944510 T
i gorGor3.chr3                 I 23009 I 98
s ponAbe2.chr3                 159838753 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538167 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495494 1 - 155834243 T
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80513 1 -    100118 T
i micMur1.scaffold_5252        C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873804                989923 822 -   1077187 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=32666.000000
s hg38.chr14_KI270722v1_random    130416 32 +    194050 GAGAATTCATGGTTCATGTGGAAGAGCCAATC
s panTro4.chr3                 125204418 32 - 202329955 GAGAATTCATGGTTCATGTGGAAGAGCCAAAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838754 31 - 202140232 GAGAATTCATGGTTCATGTGGAAGAGCCAAA-
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538168 32 -  28733288 GAGAATTCATGGTTCATGTGGAAGAGCCAAAC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495495 32 - 155834243 GAGAACTCATGGTTCACATGGAAGAGCTAAAA
i calJac3.chr7                 C 0 C 0
s micMur1.scaffold_5252            80514 32 -    100118 GAGTACACAAGGTTCACAAGGAAGAGCTAAAC
i micMur1.scaffold_5252        C 0 N 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682600 98 -  19803153 I
e otoGar3.GL873804                989923 822 -   1077187 I
e gorGor3.chr3                 122243393 98 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=46809.000000
s hg38.chr14_KI270722v1_random    130448 66 +    194050 ACCTGATTTTTCAGTAAAGTCGAATCTCTTGATGCAAAATAAACAAAATTTATTTTCTCCTTCTCT
s panTro4.chr3                 125204450 66 - 202329955 ACCTGATTTTTCAGTAAAGTGGAACCTCATGGTGCAAAATTAACAAAACTTATTTTCTCCTTCTCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838785 63 - 202140232 ACCTGATTTTTCAGTAAAGTGGAACCTCATGATGCAAAATAAACAAAATTTATTTTCTCCTCT---
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538200 66 -  28733288 ACCTGATTTTTCAGTAAAGTGGAGCCTCATGATGCAAAATAAACAAAATTTATTTTCTCCTTCTCT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495527 62 - 155834243 ATCTGATTTTTCAGTAAAGTGGTACCTCATGATGCAAAATAAGCAAAATATATTTTCTCTCT----
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682600 98 -  19803153 I
e otoGar3.GL873804                989923 822 -   1077187 I
e gorGor3.chr3                 122243393 98 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=4011.000000
s hg38.chr14_KI270722v1_random    130514 2 +    194050 CT
s panTro4.chr3                 125204516 2 - 202329955 CT
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19682698 2 -  19803153 ct
i panPan1.JH650580             I 98 I 4828
s gorGor3.chr3                 122243491 2 - 199944510 CT
i gorGor3.chr3                 I 98 I 1929
s ponAbe2.chr3                 159838848 2 - 202140232 CT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538266 2 -  28733288 CT
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495589 2 - 155834243 CT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873804                989923 822 -   1077187 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=96851.000000
s hg38.chr14_KI270722v1_random    130516 113 +    194050 TATCTTAGTCTGCATTGAACTTGTGTCTCAATGAGTTCACCTAAACATTATTCCCAGTATGTGTTTATACTTATATATTCATAACCAGATCATGAGCTCCTTTGAGGAGTAGA
s panTro4.chr3                 125204518 113 - 202329955 TATCTTAGTCTGCATTGAACTTGTGTCTCAATGAGTTCACCTAAACATTATTCCCAGTATGTGTTTATACTTATATATTCATAACCAGATCATGAGCTCCTTTGAGGAGTAGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838850 113 - 202140232 TATCCTAGTCTGCATTGAACTTGTGTCTCAATGAGTTCACCTAAACATTATTCCCAGTATGTGTTTATACTTGTATATTCATAACCAGATCGTGAGCTCCTTTGAGGAGTAGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538268 113 -  28733288 TATCCTAGTCTGCACTGAACTTGTGTCTCAATGAGTTCACCTAAACATTATTCCCAGTATGTGTTTATACTTATATATTCATAACCAGATCATGAGCTCCTTTGAGGAGTAGA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495591 110 - 155834243 CATCCCAGTCTGCATTGAACTTGTGTCTCAATTAGTTTACCTAAACATTATTCCCAGTATGTGTTTATACTTACATATTCATGAGCAGATCATGAGCTCCTT---GGAGTAGA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                989923 822 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=-1390.000000
s hg38.chr14_KI270722v1_random    130629 1 +    194050 -A
s panTro4.chr3                 125204631 1 - 202329955 -A
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838963 1 - 202140232 -A
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538381 1 -  28733288 -A
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495701 1 - 155834243 -A
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                990745 1 -   1077187 C-
i otoGar3.GL873804             I 822 I 125
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=303.000000
s hg38.chr14_KI270722v1_random    130630  5 +    194050 tttta--------
s panTro4.chr3                 125204632  8 - 202329955 ttttatt-----c
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838964  9 - 202140232 TTTTATTC----C
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538382 13 -  28733288 ttttattcctctt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495702 13 - 155834243 TTTTATTCATCAT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                990746 125 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=144456.000000
s hg38.chr14_KI270722v1_random    130635 155 +    194050 tttctctttttttttgagagataggctctctgttggccaggctggagtgcagtggtgtg-------atcatcactcactgcactgtcaaactcctgtgtttgagcaatccttcagcctcagcttccagagtagccaggactacaggcatccagcattatgcc
s panTro4.chr3                 125204640 155 - 202329955 tttttttttttttttgagaggtaggctctctgttggccaggctggagtgcagtggtgtg-------atcataactcactgcactgtcaaactcctgggctcaagcaatccttcagcctcagcttccagagtagccaggactacaggcatgcAGCATTATGCC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159838973 155 - 202140232 TAtttttttttttttgagagatagggtctctgttggccaggctggagtgcagtggtgtg-------atcataactcactgcactgtcaaactcgtgggctcaagcaaccattcagcctcagcttccagagtagccaggactacagccatgcaggaatatgcc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538395 155 -  28733288 tttttttttttttttgagagacagggtctctgttggccaggctggagtgcagtggtgtg-------atcataactcactacactgtcaaactcctgggctcaagcaatccttcagcctcagcttccagagtagccaggactacaggcatgcAGGATTATGTC
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495715 155 - 155834243 CAtctttctttttttgagagcaagggtctctgttggccaggctggagtgcagtggtgtg-------attgtaacctgttgcaccctcaaactcctgggctccagtagtctttgagcctcaacttccagagtggccaggactacaggtgtgcAGCATTAAGTC
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                990871 155 -   1077187 tttttttttttttttgagacagagttttactgt-------gttgcgcctcagtagtgtgccatggcatcacagctcacagcaacctcaaactcttgggcttaagggattctgttgcctcaacctcccaagttgctggaactacaggtgtcctccacaatgcc
i otoGar3.GL873804             I 125 I 1037
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=104264.000000
s hg38.chr14_KI270722v1_random    130790 139 +    194050 tg-tatttttttattatttttgaagagagagggtctTGCATTTTGTTTATACTTTTGTCCCTAGCAACAAGAGTGGTTCTAGATCTATAAGGTGAAATTTGTAATATAATTTTATTAATTCATAAGTTATTACAGTGGAA
s panTro4.chr3                 125204795 140 - 202329955 tattttttttttattatttttGTAGAGAGAGGGTCTTGCATTTTGTTTATACTTTTATCGCTAGCAATAAGGGTGGTTCTAGATCTATAAGGTGAACTTTGTAATACAATTTTATTAATTCATAAGTTATTACAGTGGAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839128 137 - 202140232 ta---tttttaaattatttttgtagagagagggtcttgcATTTTGTTTATACTTTTATCCCTAGCAACAAGGGTGGTTCTAGATCTATAAGGTGAACTTTGTAATACAATTTTATTAATTCATAAGTTATTAGAGTAGAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538550 138 -  28733288 TA--TTTTTAAAATTATTTTTGTAGAGAGAGGGCCTTGCATTTTGTTTATACTTTTATCCCTAGCAACAAGGGTGGTTCTAGATCTATAAGGTGAACTTTGTAATACAATTTTATTAATTCATAAGTTATTACAGTGGAA
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120495870 138 - 155834243 TA--ATTAAAAAAAAAATTTTGTAGAGAGAGGGTCTTGCATTTAGTTTATACTTTTATCCCTAGGAACAAGGGTGGTTCTAGATCTTCAAGGTGAACTTTGTAATATAGTTTTATTAATTTATAAGTTATTACAGTGGAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                991026 1037 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648   2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=-493.000000
s hg38.chr14_KI270722v1_random    130929 3 +    194050 GAA--
s panTro4.chr3                 125204935 3 - 202329955 GCA--
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839265 3 - 202140232 GCA--
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538688 3 -  28733288 GCA--
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120496008 3 - 155834243 GTA--
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                992063 3 -   1077187 --ATT
i otoGar3.GL873804             I 1037 I 250
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648 2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=54543.000000
s hg38.chr14_KI270722v1_random    130932 71 +    194050 TATTTCTACTGTGATTACTCCTTCTCCCACCATAAACAGTATAAAACAAACTACGTCTTATCTAAAATACA
s panTro4.chr3                 125204938 70 - 202329955 TATTTCTACTGTGATTACTCCTTCTCCCACCATAAACAGTGCAAAACAAACTACATCTTATGTAAAATAC-
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839268 71 - 202140232 TATTTCTACTGTGATTACTGCTTCTCCCACCACAAACAGTACAAAACAAACTACATGTTATGTAAAATACA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538691 71 -  28733288 TATTTCTACTGTGATTACTGCTTCTCCCACCATAAACAGTACAAAACAAGCTACATCTTATGTAAAATACG
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120496011 71 - 155834243 TATTTCTACTGTGATTATTCTTTCTCCCACTCTAAACAGTACAAAATAAGCTACATCTTATGTAAAATCCA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992066 250 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e papAnu2.chr9                   3415648  2 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=46042.000000
s hg38.chr14_KI270722v1_random    131003 46 +    194050 TATAAGACACATGGACACACAAAAGAGTGAATTCCCAGATTCTTGT
s panTro4.chr3                 125205008 45 - 202329955 -ATAAGACACATGGACACACAAAGGAGTGAATTCCCAGATTCTTGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839339 45 - 202140232 TATAAGACACATGGACACACAAAAGAGTGAATTCCCAGA-TCTTGT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538762 45 -  28733288 TATAAGACACATGGACACACAAAAGAGTGAATTCCCAGA-TCTTGT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3415650 44 - 125196307 TGTAagatacac--acagagagaagggcAAATTCCCAGATACCTGT
i papAnu2.chr9                 I 2 C 0
s calJac3.chr7                 120496082 46 - 155834243 TGTAAGACACATGGACGCACAAAAGGATGAATTCCCAGATTCTTGT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992066 250 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548175 473 - 229590362 I

a score=182911.000000
s hg38.chr14_KI270722v1_random    131049 118 +    194050 TCTTTTGACCCTGGGCTGATGCTTTGACTTGAGGAAATATGTGTCATTACAGGGGTTGGTGTCCTTTGAAGATGTGGCTCTGCACTTCACCTGGGAGGAGTGACAGGACCTGGATGAT
s panTro4.chr3                 125205053 118 - 202329955 TCTTTTGACCCTGGGCTGATGCTTTGACTTGAGGAAAAATGTGCCATTACAGGGGTTGGTGTCCTTTGAAGATGTGGCTGTGCACTTCACCTGGGAGGAGTGGCAGGACCTGGATGAT
i panTro4.chr3                 C 0 I 129
s ponAbe2.chr3                 159839384 118 - 202140232 TCTTTTGACCCTGGGCTGATGCTTTGACTTGAGGAAAAATGTGCCATTACAGGGGTTGGTGTCCTTTGAAGAGGTGACCATGCACTTCACCTGGGAGGAGTAGCAGGACCTGGATGAT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27538807 118 -  28733288 TCTTTTGACCCTGGGCTGATGCTTTGACTTGAGGAAAAATGTGCCATTACAGGGGTTGATGTCCTTTGAAGATGTGGCTGTGCACTTCACCTGGGAGGAGTGGTAGGACCTGGATGAT
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548648 113 - 229590362 TCTTGTGACCCTGGGCTGA-----TGACTTGAGGAGAAATGTGCCATTACAGGGGTTGGTGTCCTTTGAGGAGGTGGCCGTGCACTTCACCTGGGAGGAGTGGCAGGACCTGGATGAT
i rheMac3.chr1                 I 473 C 0
s papAnu2.chr9                   3415694 106 - 125196307 ----GTGACCCAGGGCCAA-----TGACTC---AAGAAATGTGCCATTGTAGGCGTTGGTGTCCTTTCAGGATATGGCTGTGGACTTTACCTAGGAGGAGTGGCAGCATCTGGACAAT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496128 118 - 155834243 TTTTTTGACCCTGGATTGATGTCTTGACTTGAGGAAAAATGTGCCATTACAGGGGTTGGTGTCCTTTGAAGATGTGGCTGTGCACTTCACCTGGGAGGAGTGGCAGGACCTGGGTGAT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992066 250 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=40495.000000
s hg38.chr14_KI270722v1_random    131167 24 +    194050 GCTCAGAGGACCTTCTACAGGGAC
s panTro4.chr3                 125205300 24 - 202329955 GCTCAGAGGACCCTGTACAGGGAC
i panTro4.chr3                 I 129 C 0
s ponAbe2.chr3                 159839502 24 - 202140232 GATCAGAGGACCCTGTACAGGGAC
i ponAbe2.chr3                 C 0 I 129
s nomLeu3.chr24                 27538925 24 -  28733288 GCTCAGAGGACCCTGTACAGGGAC
i nomLeu3.chr24                C 0 I 129
s rheMac3.chr1                 225548761 24 - 229590362 GCACAGAGGACACTATACAGGGAC
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3415800 24 - 125196307 GCTCAGAGGACCCTGTACAGAGAC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496246 24 - 155834243 GCTCAGAGGACCCTGTACAGGGAT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992066 250 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=21960.000000
s hg38.chr14_KI270722v1_random    131191 13 +    194050 GTGATTGTGGAGA
s panTro4.chr3                 125205324 13 - 202329955 GTGATGCTGGAGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839655 13 - 202140232 GTGATGCTGGAGA
i ponAbe2.chr3                 I 129 C 0
s nomLeu3.chr24                 27539078 13 -  28733288 GTGATGCTGGAGA
i nomLeu3.chr24                I 129 C 0
s rheMac3.chr1                 225548785 13 - 229590362 GTGATGCTGGAGA
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3415824 13 - 125196307 ATGATGCTGGAGA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496270 13 - 155834243 GTAATGCTGGAGA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992066 250 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=24885.000000
s hg38.chr14_KI270722v1_random    131204 11 +    194050 CCTACAGCAGC
s panTro4.chr3                 125205337 11 - 202329955 CCTACAGCAGC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839668 11 - 202140232 CCTACAGCAGC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539091 11 -  28733288 CCTACAGCAGC
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548798 11 - 229590362 CCTACAGCAGC
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3415837 11 - 125196307 CCTATAGCATC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496283 11 - 155834243 CCTACACCAGC
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                992316 11 -   1077187 TCTACAGCAGC
i otoGar3.GL873804             I 250 I 131
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=66414.000000
s hg38.chr14_KI270722v1_random    131215 41 +    194050 CTGGTATCATTGGGTGAGTGAAACTTCCCAGTAACTCCCAG
s panTro4.chr3                 125205348 41 - 202329955 CTGGTATCATTGGGTGAGTGAAACTTCCCAGTAACTCCCAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839679 41 - 202140232 TTGGTATCATTGGGTGAGTGAAACTTCCCAGTAACTCCCAG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539102 41 -  28733288 CTGGTATCATTGGGTGAGTGAAACTTCCCAGTAACTCCCAG
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548809 41 - 229590362 CTGGTGTCACTGGGTGAGTGAAGCTGCCCAGTAACCCCCAG
i rheMac3.chr1                 C 0 I 97
s papAnu2.chr9                   3415848 41 - 125196307 CTCGTATCATCGAGTGAGTGAAACTTGCCAGTACCTCCAAG
i papAnu2.chr9                 C 0 I 3
s calJac3.chr7                 120496294 41 - 155834243 CTGCTATCATTGGGTGTGTGAAACTCCTCAGTAACTCCCAG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992327 131 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=73231.000000
s hg38.chr14_KI270722v1_random    131256 84 +    194050 GAATGTGT--ATTGTTGTTGGTAAATATAGAAACCCTTTTAAGAT--ATAATAATATTTACTTGTAAGATTCTGGTTGATGAAAAATG
s panTro4.chr3                 125205389 84 - 202329955 GAATGTAT--TTTGTTGCTGGTAAATATAGGAACCCTTTTAAGGT--GTAATAATATTTACTTGTAAGCTTCCAGTTGATGAAAAATG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839720 84 - 202140232 GAATGTGT--TTTGTTGTTGGTAAATATAGCAACCCTTTTAAGGT--ATAATAATATTTACTTGTAAGATTCCAGTTGATGAAAAATG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539143 86 -  28733288 GAATGTGT--TTTGTTGTTGGTAAATATAGGAACCCTTTTAAGGTAAATAATAATATTTACTTATAAGATTCCAGTTGATGAAAAATG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3415892 85 - 125196307 CAATACTTTATTCCTTCTTGATAAATACAGGAACCTGTATAAGTT---TTCTACTATTTAGGTATAAGATTCCAGTCCATGAAGAATG
i papAnu2.chr9                 I 3 C 0
s calJac3.chr7                 120496335 81 - 155834243 GAACATGT--TTTGTTGGTGGCAAATATAGGAATCTTTTTAAGTT-----ATAATAATTAGTTGTAAGATTCCATTTGATGAAAAAGG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992327 131 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548850 97 - 229590362 I

a score=1941.000000
s hg38.chr14_KI270722v1_random    131340 2 +    194050 TG
s panTro4.chr3                 125205473 2 - 202329955 TG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839804 2 - 202140232 TG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539229 2 -  28733288 TG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3415977 2 - 125196307 TG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496416 2 - 155834243 TA
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                992458 2 -   1077187 AG
i otoGar3.GL873804             I 131 I 864
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548850 97 - 229590362 I

a score=15369.000000
s hg38.chr14_KI270722v1_random    131342 19 +    194050 TCATTATTC--TAATGAAATG
s panTro4.chr3                 125205475 19 - 202329955 TCACTACTC--TAATGAAATG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839806 21 - 202140232 TCATTACTCTGTAATGAAATA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539231 21 -  28733288 TCACTACTCTGTAATGAAATG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3415979 21 - 125196307 TCACCCCTGTCCAATGAAAGG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496418 21 - 155834243 TTACTGCTCTATAATGAAATG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992460 864 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225548850 97 - 229590362 I

a score=280732.000000
s hg38.chr14_KI270722v1_random    131361 179 +    194050 TTCAAATTGGCTCCTTCATTACACAGTCCCTGAAGCCCAGCTCTTGTCATTCTGAAAAGGATTTGACTTAGTGGTTTGACAAAGTATTCCATTGTTTCTCGTTACCAGGGCATTGCATTACCAAACCTGAGATGATCTTCAAGCTAGAGCAAGGAACAGAGACATGGATAGTAGAAGAA
s panTro4.chr3                 125205494 179 - 202329955 TTCCAATTGGCTCCTTCATTGCACAGTCCCTGAAACCCAGCTGTTGTCATTCTGAGAAGGATTTGACTTAGTGGTTTGACAAAGTCTTCCATTGTTTCTCGTTACCAGGGCATTGCATTACCAAACCTGAGATGATCTTCAAGCTAGAGCAAGGAGCAGAGCCATGGATAGTAGAAGAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159839827 177 - 202140232 TTCAAATTGGCTCCTTCATTGCACAGTCCCTGAAGCCCAGCTGTTGTCATTCTGAAAAGGATTTGACTTAGTGGTTTGACAAAGTCTTCCATTGTTTCTCATTACCAGGACATCACATTACCAAACCTGAGATGATCTTCAAGCTAGAGCAAGGAGCAGAGCCATGGATAGTAGAAG--
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539252 179 -  28733288 TTCAAATTGGCTCCTTCATTGCACAGTCCCTGAAGCCCAGCTGTTGTCATTCTGAAAAGGATTTGACTTAGTGGTTTGACAAAGTCTTCCATTGTTTCTCGTTACCAGGGCATCACATTACTAAACCTGAGATGATCTTCAAGCTAGAGCAAGGAGCAGAGCCATGGATAGTAGAAGAA
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225548947 179 - 229590362 TTCAAATAGGCTCCTTCATTATACAGCTTCTGAAACCGAGCTGTTGTCATTCTGAAAAGGACCTTACTTTGCAGTTTGGCTAAGTCCTCCATTATTTCCCATTACCAGGCCATTGCATTACCAAACCTGAGGTGATCTTCAAGTTGGAGCAAGGAGCAGAGCCATGGTTAGGAGAAGAA
i rheMac3.chr1                 I 97 I 2396
s papAnu2.chr9                   3416000 179 - 125196307 TTAAAATTGGCTCCTTCATTGCACAGCTGCTGAAGCCAAGCTGTTGTCATTCTTCAAAGGACCTGACTTAGCATTTTGACAAAGTCTTACATTATTTCCAATTAAAAGGGCATTGCATTACTAAACCTGAAGTGATCTTCAAGTTGGAGCAAGAAACAGAGCCACAGAGGGTAGAAGAA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496439 174 - 155834243 TTCAGATTGGCTCCTTCATTGCACAGTCCCTGA-----AGCTGGTTTCATTCTGAAAAGGATTTGACTTAGTGATTTGACAAAGTCTTCCATTGTTTCTCATTACCAGGGCACTGCATTACCAAACCTGAGATGATCTTCAAGTTAGAGCAAGGAGCAGGGCCATGGATGGTAGAAGAA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992460 864 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=261769.000000
s hg38.chr14_KI270722v1_random    131540 288 +    194050 ATACCAAACCTGAGACTTTCAGGTCAGTCAGTGAATACTGGGGTGGGAGGCCTGGAGGAGTAATGCCCAGCAGATTTTGGTAGTGTTATCTTGTTTTCACCACTTTTTTCCCT--AGGTCTTCGACCTGAAGACTGTTGGT----CTGCAT------TAAATGTCCATTATATAGTCCCC-AGGAGTAACTGTCATGCATATATCCCAGTCTCTTATTTTTCTGAGTATCTTCTTCTATTTACCCCAAATCCAATCCCTGCCATCC---TCTCTTTAGGCCTTTTTCTTTGCTATTTATT---------TTAT--
s panTro4.chr3                 125205673 288 - 202329955 ACCCCAAACCTGAGACTTTCAGGTCAGTCAGTGAATACCGGGCAGGGAGGCCTGGAGGAGTAATGCCCAGCAAATTTTTGTAGTGTTATCTTGTTTTCACCACTTTTTTCCCT--AGGTCTTCAACCTGAAGGCTGTTGGT----CTGCAT------TAAATGTGCATTATATAGTCCCC-AGGGGTAACTCTCATGCATATATCCCAGTCTCTTATTTTTCTGAGTATCTTCTTCTATTTACCCCAAATCCAATCCCTGCCATCC---TCTCCTTAGGCCTTTTTCTTTGCTATTTATT---------TTCT--
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159840004 286 - 202140232 -CCCCAGACCTGAGACTTTCAGGTCAGTCAGTGAATACTGGGCAGGGAGGCCTGGAGGAGTAATGCCTAGCAGATTTTGGTAGTGTTATCTTGTTTTCACCACTTTTTTCCCT--AGG-CTTCGACCTGAAGACTGTTGGT----CTGCAT------TAAATGTGCATTATATAGTCCCC-AGGGGTAGATCTCATGCATATATCCCAGTCTTTTATTTTTCTGAGTATCTTCTTCTATTTACCCCAAATCCAATACCTGCCATCC---TCTCCTTAGGCCTTTTTCTTTGCTATTGATT---------TTCT--
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539431 286 -  28733288 ACCCCAAACCTGAGACTTTCAGGTCAGTCAGTGAATACT-GGCAGGGAGGCCTGGAGGAGTAATGCCCAGCAGATTTTGGTAGTGTTATCTTGTTTTCACCACTTTTTCCCCT--GGGTCTTAGACCTGAAGACTGTTGGT----CTGCAT------TAAATGTGCATTATATAGTCCCC-AGG-GTAGATCTCATGCATATATCCCAGTCTCTTATTTTTCTGAATATCTTCCTCTTTTTACCCCAAATCCAATCCCTGCCATCC---TCTCCTTAGGCCTTTTTCTTTGCTATTTATT---------TTCT--
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3416179 289 - 125196307 GTCCCAGATCAGAGCCTTGCAGGTCAGTCAGCACGTGCTGGACAGGGACACCTGGAGCAGTAAAGCCCAGCAGA---------TGCCAATTTGTTTTCACCAATTTCTACCC---AGGTCCTAGACCTGAGAACAGTTAGT----CTGCATACACCAAACACATGCATTACATAGACCCCTAAGAATACCTCTCATACATAGAACCCAGCCTTTTGTTTTGCTGAATAG-----TCTCTTTGTTCAAAACTTAATTCCTGCCTCCC---TATTCTTAgacattttcctttgctttttattttcttaatattct--
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120496613 294 - 155834243 GCCCCAAA-CAGAGACTTTCAGGTCAGTCAGTGGATACTGGGCAGAGAGGCCTGGAAGAGCAATATCCAGCAGATTTTGGTAGTGTTGACTTGTTTTCACCACTTTTTTTCCCCAAGGTCTCAGACCTGAGGTCAGTTGGTCTTCCTGCAT------TAAATGTGCATTATATAGTCCCC-AGGGATAGCTCTCATGCATCTGT-CCAGTCTTTTATTTTT-TGAGCATCTTTTTCTATTCGTCCCAAATTCAATCCCTGCCATCCATGTATCTTAAGCAATTTtttttt--ttttaatt---------ttttat
i calJac3.chr7                 C 0 I 6257
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992460 864 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225549126 2396 - 229590362 I

a score=50040.000000
s hg38.chr14_KI270722v1_random    131828 84 +    194050 CTATTTCCCCCTTTTCCTCTATTCTGATGTAGTGTCTTAAAAA-TTTTTTTAGAC----ATTTATGCATTTATTTATCCTTTGAATGTA
s panTro4.chr3                 125205961 85 - 202329955 CTATTTCCCCCTTTTCCTCTATTCTGATGTAGTATCTTAAAAAATTTTTTTAGAC----ATTCATGCATTTATTTATCCTTTGAATGTA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159840290 84 - 202140232 CTATTTTCCCCTTTTCCTCTCTTCTGATGTAGTATCTTAAAAA-TTTTTTTAGAC----ATTCATGCATTTATTTATCCTTTTAATGTA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539717 84 -  28733288 CTATTTCCCCCTTTTCCTCTATTCTGGTGTAGTATCTTAAAAA-ATTTTTTAGAC----ATTCATGCATTTATTTATCCTTTGAATGTA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3416468 82 - 125196307 cAGTTGCCCTCCTTTCCTCTATTTGCAGGGA------TGAGTC-TTTTTTCAGACATGTATTCATACATCAGCTTATTCTTTCAACACA
i papAnu2.chr9                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e calJac3.chr7                 120496907 6257 - 155834243 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992460 864 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225549126 2396 - 229590362 I

a score=22708.000000
s hg38.chr14_KI270722v1_random    131912 27 +    194050 TCTTA----AGCAATTTTTGAGAATCA--------GTCA
s panTro4.chr3                 125206046 27 - 202329955 TCTTA----AGCGATTTTTAAGAATCA--------GTCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159840374 27 - 202140232 TCTTA----AGTGATTTTTAAGAATCA--------GTCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27539801 27 -  28733288 TCTTA----AGCGATTTTTAAGAATCA--------GTCA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3416550 39 - 125196307 TCTTAATTCAGCAGGTTTTAAATATTGGCAATTTTGTAG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120503164 27 - 155834243 TCTTA----AGCAATTTTTAAGAATCA--------GTAA
i calJac3.chr7                 I 6257 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                992460 864 -   1077187 I
e gorGor3.chr3                 122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225549126 2396 - 229590362 I

a score=17730.000000
s hg38.chr14_KI270722v1_random       131939 23 +    194050 --------TT------ATAACAATGATGATGAAA-ATA
s panTro4.chr3                    125206073 20 - 202329955 --------TT------ATAAC---GATGATGAAA-ATG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840401 23 - 202140232 --------TT------ATAACAGTGATGATGAAA-ATA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27539828 23 -  28733288 --------TT------ATAACAGTGATGATGAAA-ATA
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3416589 20 - 125196307 --------TT------ATAAC---TGTGATCAAA-ATA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120503191 23 - 155834243 --------TT------ATAGCAGTGATGATGAAA-ATA
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_113643.1-48647      3806 37 -     48647 gtttgttgttgtaaagatagcagtagtaatcaaacat-
i tupBel1.scaffold_113643.1-48647 N 0 I 2995
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   992460 864 -   1077187 I
e gorGor3.chr3                    122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=13885.000000
s hg38.chr14_KI270722v1_random       131962 12 +    194050 GTGTTTCTTTTT
s panTro4.chr3                    125206093 12 - 202329955 GTGTTTCTTTTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840424 12 - 202140232 GTGTTTCTTTTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27539851 12 -  28733288 GTGTTTCTTTTT
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3416609 12 - 125196307 ATGGTCCTTTTT
i papAnu2.chr9                    C 0 I 382
s calJac3.chr7                    120503214 12 - 155834243 GTGTTTCTCTTT
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   992460 864 -   1077187 I
e gorGor3.chr3                    122243493 1929 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=203892.000000
s hg38.chr14_KI270722v1_random       131974 255 +    194050 AAGCTGTAGCtttattcttcttgttttattttttatcaaacagatggttctcactctgtttctcagactcaagtgcagtggcatgattatagttgactgtaacgatgaactcctgggatcaagtgttcctcacagcctagcctcccaagtagctaggactacaggtgtgtgccaccacacctggctaa--ttttttattgtttgtggagatgaggtcttgttctattgcccaggctggtctcgaacttctggcctta
s panTro4.chr3                    125206105 252 - 202329955 AAGCCGTAGCtttattctt---gttttattttttattaaacagatggttctcactctatttctcagactgaagtgcagtggcatgattatagttcactgtaatgatgaactcctgggctcaagtgttcctcacaccctagcctcccaagtagctaggactacaggtgtgtgccacaacacccggctaa--ttttttattgtttgtggagatgaggtcttgttctgttgcccaggctggtctcaaacttctggcctta
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840436 255 - 202140232 AAGCTGTAGCtttattcttctttttttattttttattaaacagatggttctcgctctgtttctcagactcaagtgcagtggcatgattatagttcactgtaatgatgaactcctgggctcaagtgttcctcacaccctagcctcccaagtagctaggactacaggtgtgtgccaccacacctcactgc--ttttttattgtttgtagagatgagatcttgttctattgcccaggctggtctcaaacttctggcctta
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27539863 255 -  28733288 AAGCTGTAGCtttattcttcttgttttattttttactaaacagatggttctcgctctgtttctcagactcaagtgcagtggcatgactatagttcactgtaatgatgaactcctgggctcaagtgttcctcacaccctagcctcccaagtagctgggactacaggtgtgtgccatcacacccagctaa--ttgtttattgtttgtagagatgaggtcttgttctattgcccaggctggtctcgaacttctggcctta
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120503226 255 - 155834243 --CCTATAGCttttttcttcttgttttattttctcttaaacagatggtgcttgctttgtttctcagactcaagtgcagtggcatgattatagttcactgtaaccatgaactcctgggctcgagtgttcctcacaccctagcctcctaagtagccaggactacaggtgtgtaccaccacacccgggtgattttttttattgtttatagggaagaggtcttgctatatagcccaggctagtctctaacttctggcctta
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   992460 864 -   1077187 I
e gorGor3.chr3                    122243493 1929 - 199944510 I
e papAnu2.chr9                      3416621 382 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=1144.000000
s hg38.chr14_KI270722v1_random       132229 2 +    194050 at
s panTro4.chr3                    125206357 2 - 202329955 ag
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840691 2 - 202140232 ag
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540118 2 -  28733288 ag
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120503481 2 - 155834243 ag
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   993324 2 -   1077187 AT
i otoGar3.GL873804                I 864 I 905
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122243493 1929 - 199944510 I
e papAnu2.chr9                      3416621 382 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=10033.000000
s hg38.chr14_KI270722v1_random       132231 40 +    194050 tgatcctTGT----AGACTCCcacccacacacacacacacaAAA
s panTro4.chr3                    125206359 37 - 202329955 tgatcctTGT----AGACCCCCACctacaaaaaaaaa---aaaa
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840693 33 - 202140232 tgatcctTGT----agaccccc-cctacaaaaaaaaa---a---
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540120 30 -  28733288 tgatcctTGT----AGacccca-cctacaaaaaaa---------
i nomLeu3.chr24                   C 0 C 0
s calJac3.chr7                    120503483 36 - 155834243 tgatcctTGTAGCAAGACCCTCACATTAAAAaaaaa--------
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   993326 905 -   1077187 I
e gorGor3.chr3                    122243493 1929 - 199944510 I
e papAnu2.chr9                      3416621 382 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=-3668.000000
s hg38.chr14_KI270722v1_random       132271 3 +    194050 --TAG
s panTro4.chr3                    125206396 3 - 202329955 --aaa
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122245422 3 - 199944510 --TAG
i gorGor3.chr3                    I 1929 I 2947
s ponAbe2.chr3                    159840726 3 - 202140232 --tag
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540150 2 -  28733288 ---ac
i nomLeu3.chr24                   C 0 I 1
s calJac3.chr7                    120503519 3 - 155834243 ttt--
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   993326 905 -   1077187 I
e papAnu2.chr9                      3416621 382 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=128273.000000
s hg38.chr14_KI270722v1_random       132274 158 +    194050 TAgctgagtatggtgacatgggtttgtaatcccagtttttatacttgggaggctgaggtggaaggattgcttgagctcaggagcttgaagcttcagtgacctatgatagcaacactgcactccagcctgggtaacagagtaagatcctgtctcagaaa
s panTro4.chr3                    125206399 158 - 202329955 tagctgagtatggtgacaagggtttgtaatcccagtttttatacttgggaggctgagatggaaggattgcttgagctcaggagtttcaagtttcagtgagctatgatagcaacactgcactccagccttggtaacagagtaagatcctgtctcagaag
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840729 158 - 202140232 tagctgagtatggtgacatgggtttgtaatctgagtttttatacttgagaggctgaggtggaaggattgcttgacctcaggagtttgaagcttcagtgagctatgatagcaacactgcaccccagcctgggtaacagagtaagatcctgtctcagaaa
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540153 158 -  28733288 tagctcagtgtggtgacatgggtttctaatcccagtttttatacttgggaggctgaggtggaaggattgcttgagctcaggagtttgaagctttagtgagctctgatagcaacagtgcactccagcctggataacagagtaagatcctgtctcagaaa
i nomLeu3.chr24                   I 1 C 0
s calJac3.chr7                    120503522 158 - 155834243 tagctgaatatggtgacatgtgtttatagtcccagtttttatgcttgggaggcttaggcggaaggattgcttgagctaaggagtttgaagcttcagtgagcattgatagcaacattgcactccagcctaggtaacagagtaagaccctatctcagaaa
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   993326 905 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e papAnu2.chr9                      3416621 382 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=398519.000000
s hg38.chr14_KI270722v1_random       132432 391 +    194050 gaaaTTATGAAGCTGAGGAGAACCCATCATAGGGGCCTGGATAGGGGTGGTGCTGGACTTGGGAGGAGAACCAGAAGATTCTGGGTCTCAAGTCCAAAGAAACCAATGATTTCCTGTTGAAGGGCTCAG-ATTTCTGTTTGAGAGTGGAGTTTGTAGTTACCATTT--------------------------------------gaagatgagaaatgtacaggaaacttcatatttatatatag-ctgtgtgacatctgaaactccaaaacacaaaataaaacccttcaaaaatggtgaattatcaagcaggggtgtgtgag-------tggagaggga----cagagctgttgatctcagaaggaaccagaaatacacttttcaaagatgacgggcacagcctgagttgcagaacc-aatccttcagatca---------------ctagtgtggt
s panTro4.chr3                    125206557 391 - 202329955 gaaaTTATGAAGCTGAGGAGGACCCATCATAGGGGCCTGGATAGGGATGGTGCTGGACTTGGGAGGAGAACCAGAAGATTCTGGGTCTCAAGTCCAAAGAAACCAATTATTTCCTGTTGAAGGGCTCAG-ATTTCTGTTTGAGAGTGGAGTTTGTAGTTACCATTT--------------------------------------gaagatgagaaatgtacaggaaacttcatttttatataaaa-ctgtgtgacatctgaaactccaaaacacaaaataaaacccttcaaaaatggtgaattatcaagcagcgattggtgag-------tggagagggg----cagggctgttgatctcagaaggaaccagaaatacacttttcaaagatgacgggcacagcctgagttgcagaacc-aatccttcagatca---------------ccagtgtggt
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159840887 391 - 202140232 gaaaTTATgaagctgaggaggacccatcataggggcctggataggggtggtgctggacttgggaggagaaccagaagattctgagtctcaagtccaaagaaaccaattatttcCTGTTGAAGGGCTCAG-ATTTCTGTTTGAGAGTGGAGTTTGTAGTTACCATTT--------------------------------------gaagatgagaaatgtacagaaaacttcatttttatataaaa-ctgtgtgacatctgaaactccaaaacacaaaataaaacccttcaaaaatggtgaattatcaagcagggatgtgtgag-------tgaagagggg----cagggctgttgatctcagaaggaaccagaaatacacttttcaaagatgacgggcacagcctgagttgcagaacc-aatccttcagatca---------------ccagtatggt
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540311 391 -  28733288 gaaaTTATgaagctgaggaggacccatcataggggcctggataggggtggtgctggacttgggaggagaaccagaaaattctgggtctcaagtccaaagaaaccaattatttcCTGTTGAAGGGCTCAG-ATTTCTGTTTGAGAGTGGAGTTTGTAGTTACCATTT--------------------------------------GAAGATGAGAAATGTACAGGAAACTTCATTTTTATATAACA-CTGTGTGACATCTGAAACTCCAAAACACAAAATAAAACCCTTCAAAAATGGTGAATTGtcaagcagggatgtgtgag-------tggagagggg----cagggctgttgatctcagaaggaaccagaaatacacttttcaaagatgacaggcacagcctgagttgcagaacc-aatccttcagatca---------------ccagtatggt
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417003 446 - 125196307 GAAGTCATGAAACTGAGGAGGACCCAGCATAGAGGCACACAAAGGAGTGGTCCTTGACTTGGGTGGAGAATCAGGAGATTCCGGGTGCCAAGGACAAGGGAATCAAGGCTTTCATGTTGAAGAGCTCAG-ATTTCTGTTTGGGAGTAGGGTTTGAAGTTAGCATTTTCCTGTTGTATTACTAGAAATCATTCTGATACAACAAAAAGAGTATGAAATGTATGGGAGACATA--TTTTCTGTGAAA-CTAAG----AACTCAAATTTCAGCACGCAAAATAAAAGCTTTCAGAAGCAGTGAATTATCAAGCAGTAGTGTGTGGGCTAGGAATGGAGAAAGAATGTCAGGGAAATTTATATCACAAGGAGCCAGAAGTACAtttttttAATATG---GGCACGGCCTAGGCTGCAGAACCAAAACCTGTAGAGTAGTAAGGAAGGGGTGCCCAGGGTGG-
i papAnu2.chr9                    I 382 C 0
s calJac3.chr7                    120503680 387 - 155834243 gaaaTTATGAAGCTGAGGAGGACCTAGCATAGTGGGCTGGATAGAGGTGGTGCTGGACTTGGGAGGAGAACCAGGAGATTCTGGGTCCCAGGTCCAAGAAAACCAATTATTTACTGTTGAAGGGCTCAGAATTTCTGTTTGAGAGTAGAGTTTGTAGTTACCATTT--------------------------------------gaagatgagaaatgtataggagacttcatttttatatgaaacctatgtgccatctgaaactctaaaacagaaaataaaacccttcagaaaccgtg---catcaagcaggggtgtgtgag-------tggag---gt----cagggctgttggtctcagaaggaaccagaaatacatttttccaagttgatgggcacagcctgggttgcagaaccaaatctttcagatca---------------ccagtatgg-
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   993326 905 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=17494.000000
s hg38.chr14_KI270722v1_random       132823 14 +    194050 tttttgactggagc
s panTro4.chr3                    125206948 14 - 202329955 tttttgactggagc
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841278 14 - 202140232 tttttgactggagc
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540702 14 -  28733288 ttttcgactggagc
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417449 11 - 125196307 ---TAGACTGGAGC
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504067 11 - 155834243 ---tagactggagc
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994231 10 -   1077187 ----AAACTGGAGC
i otoGar3.GL873804                I 905 I 6
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=5342.000000
s hg38.chr14_KI270722v1_random       132837 5 +    194050 -ttctt
s panTro4.chr3                    125206962 5 - 202329955 -ttctg
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841292 5 - 202140232 -ttcta
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540716 5 -  28733288 -ttctg
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417460 6 - 125196307 TTTCTG
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504078 5 - 155834243 -ttctg
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994241 6 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=6498.000000
s hg38.chr14_KI270722v1_random       132842 7 +    194050 tgcctat
s panTro4.chr3                    125206967 7 - 202329955 tgcctat
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841297 7 - 202140232 tgcctat
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540721 7 -  28733288 tgcctat
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417466 7 - 125196307 TACCTGT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504083 5 - 155834243 agcc--t
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994247 7 -   1077187 TGCCTCT
i otoGar3.GL873804                I 6 I 53
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=3485.000000
s hg38.chr14_KI270722v1_random       132849 3 +    194050 tat
s panTro4.chr3                    125206974 3 - 202329955 tat
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841304 3 - 202140232 tac
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540728 3 -  28733288 tat
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417473 3 - 125196307 TAT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504088 3 - 155834243 tat
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994254 53 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=9072.000000
s hg38.chr14_KI270722v1_random       132852 8 +    194050 ggttctgg
s panTro4.chr3                    125206977 8 - 202329955 ggttctgg
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841307 8 - 202140232 ggatctgg
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540731 8 -  28733288 ggatctgg
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417476 8 - 125196307 GGTTCTGA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504091 8 - 155834243 ggttctta
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994307 8 -   1077187 ggctcaag
i otoGar3.GL873804                I 53 I 197
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=18094.000000
s hg38.chr14_KI270722v1_random       132860 16 +    194050 gaagcaggagatgcca
s panTro4.chr3                    125206985 16 - 202329955 gaagcaggggatgtca
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841315 16 - 202140232 gaagcaggggatgtca
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540739 16 -  28733288 gaagcaggggatgtca
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417484 16 - 125196307 GAAGCAGAGGAAGGTA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504099 16 - 155834243 gaagcagaggatgtca
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994315 197 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=11051.000000
s hg38.chr14_KI270722v1_random       132876 23 +    194050 ---------------------------------tgttt-----------aagtaggaatTTG-CCAGG
s panTro4.chr3                    125207001 23 - 202329955 ---------------------------------tgttt-----------cagtaggaatttg-ccagg
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841331 23 - 202140232 ---------------------------------tgctt-----------aagtaggaatttg-ccagg
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540755 23 -  28733288 ---------------------------------tgttt-----------aagtaggaatttg-ccagg
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417500 22 - 125196307 ----------------------------------GTTA-----------CATTAGTTAGTTG-CAGGG
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504115 23 - 155834243 ---------------------------------tgttg-----------aattaggaatttg-ccagg
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994512 68 -   1077187 tggcactctgcccagggggatagcttgaggctccgtctcaaaaaaaaaaaaaaaagaaTTAGACCAAG
i otoGar3.GL873804                I 197 I 238
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=209691.000000
s hg38.chr14_KI270722v1_random       132899 211 +    194050 ATCTGTTTATGTTTAACATGGGGAATAAGATATTTTCTGCTTGGAAAACCTCCAGAC--------------ACATTTAACCATTCTCAGGGAGGAGTGAAAAGT-TAACATATAGGCAAAATCCTGTCTACAAGCTACTTCGATGCTTAGGAGACAGAAAAATGGC-CATCTCCTGTAcctgcca---gttgctgacccaagaaaaactggctatcttcaaagaagaatg
s panTro4.chr3                    125207024 211 - 202329955 atctgtttttgtttaacatggggaataagagattttctgcttggaaaacctccagac--------------acatttaaccattctcagggaggagtgaaaggt-taacatataggcaaaatcctgtccacaagctacttccatgcttaggagacagaaaaatggc-catctcctgtacctgcca---gttgctgacccaggaaaaactggctatcttcaaagaagaata
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841354 211 - 202140232 atctgtttttgtttaacatggggaataagagattttctgcttggaaaacctccagac--------------acatttaaccattctcagggaggagtgaaaggt-taacatataggcaaaatcctgtccacaagctacttccatgcttaggagacagaaaaatggc-catctcctgtacctgcca---gttgctaacccaggaaaaactggctatcttcaaagaagaata
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27540778 225 -  28733288 atctgtttttgtttaacatgaggaataagagattttctgcttggaaaacctccaagcagaaatggttaaaaacttttaaccattctcagggaggagtgaaaggt-taacatataggaaaaatcctgtccacaagctacttctatgcttaggagacagaaaaatggc-catctcctgtacctgcca---gttgctgacccaggaaaaactggctatcttcaaagaagaata
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417522 201 - 125196307 ATGTGTCTTTATCTAGCATAGGGAATAAGtga-tttatatttgaaaaaccCCCAAAT--------------GCCTACAGCCATTCCCAGGAAAGAGTGAAAACTAAAACGTAGATGGAAAATCCTGTCCCTAAGTCa----------taggatacaaacaaatgac-cTTCCCCTGTACCTGCAA---GTAGCTGATCCAGGGAAATGTTGCCATCATCAAAGCAGAAGA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504138 211 - 155834243 atctgtctttgtttaacatgtggaataagagattttctgtttggaaaacctctaggt--------------acctataaccattctcagggaagagtgaaaggt-taacatagaggcaaaatcttgtccacaagctgcttccctgcttagaagatagaaaaatgtcttatctcctgcacctgccagttgttgctgacccaggaaaaatt----atcctcaaaaaagaatt
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994580 238 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=22681.000000
s hg38.chr14_KI270722v1_random       133110  51 +    194050 -atgaaaaa--atagcaact-----attaaaacagc-------------------------------cactattgttatatg----------------------------------aataaat-----a-
s panTro4.chr3                    125207235  51 - 202329955 -aagaaaaa--atagcagct-----attaaaacagc-------------------------------cactattgttatatg----------------------------------aataaat-----a-
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841565  51 - 202140232 -atgaaaaa--acatcagct-----attaaaacagc-------------------------------cactattgttatatg----------------------------------aataaat-----a-
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541003  51 -  28733288 -atgaaaaa--ataccagct-----attaaaacacc-------------------------------gactattgttatatg----------------------------------aataaat-----a-
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417723  48 - 125196307 -ATGAGATATGCTAGCA----------TGAGACACC-------------------------------CACTGttgttttcag----------------------------------aataaaa-----t-
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504349  56 - 155834243 -atgagaaa--ataccagct-----attgaaacacc-------------------------------cactattgttatata----------------------------------aataaataaaaca-
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994818 123 -   1077187 ATAGAGAAA--ACCATTGTTAAAAGATTAAAATAGAGgggtggcatctgtggctcaaaggagtagggcaccagccccatatgctggaggtggcaggttcaaacccagccctggccaaaaaaac-----tg
i otoGar3.GL873804                I 238 I 21
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=22665.000000
s hg38.chr14_KI270722v1_random       133161 21 +    194050 gaaaaaaagagagaaaacaaa
s panTro4.chr3                    125207286 21 - 202329955 gaaaaaaagagagaaaacaaa
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841616 20 - 202140232 g-aaaaaagagagaaaacaaa
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541054 21 -  28733288 gaaaaaaagagagaaaacaaa
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417771 21 - 125196307 aaaaagaagtgagaaaaCAAA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504405 21 - 155834243 gaaaaaaagaggcaaaacaaa
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994941 21 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=3651.000000
s hg38.chr14_KI270722v1_random       133182 5 +    194050 --tgaca
s panTro4.chr3                    125207307 5 - 202329955 --tgaca
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841636 5 - 202140232 --tgaca
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541075 5 -  28733288 --tgaca
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417792 5 - 125196307 --TGGCA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504426 5 - 155834243 --tgaca
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994962 5 -   1077187 GGTTA--
i otoGar3.GL873804                I 21 I 12
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=8965.000000
s hg38.chr14_KI270722v1_random       133187 11 +    194050 ---------gataatgagca
s panTro4.chr3                    125207312 10 - 202329955 ----------ataatgagca
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841641 11 - 202140232 ---------gataatgagca
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541080 11 -  28733288 ---------gataatgagca
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417797 11 - 125196307 ---------GATGAAAAACA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504431 20 - 155834243 caaatgacggataatgagca
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994967 12 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=3354.000000
s hg38.chr14_KI270722v1_random       133198 3 +    194050 ctt
s panTro4.chr3                    125207322 3 - 202329955 ctt
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841652 3 - 202140232 ctt
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541091 3 -  28733288 ctt
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417808 3 - 125196307 CTT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504451 3 - 155834243 ctt
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   994979 3 -   1077187 CAA
i otoGar3.GL873804                I 12 I 813
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=764793.000000
s hg38.chr14_KI270722v1_random       133201 799 +    194050  
s panTro4.chr3                    125207325 797 - 202329955  
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159841655 800 - 202140232  
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541094 792 -  28733288  
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3417811 758 - 125196307  
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120504454 799 - 155834243  
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   994982 813 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=4984.000000
s hg38.chr14_KI270722v1_random       134000 7 +    194050 GACAGCC
s panTro4.chr3                    125208122 7 - 202329955 GACAGCC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842455 7 - 202140232 GACAGCC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541886 7 -  28733288 GACAGCC
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418569 7 - 125196307 GGAGCAA
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505253 7 - 155834243 GGCAGCC
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   995795 7 -   1077187 GAAAGTT
i otoGar3.GL873804                I 813 I 133
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=31708.000000
s hg38.chr14_KI270722v1_random       134007 28 +    194050 AACTTGCTGTAGAAAGTCTGACTTCAGT
s panTro4.chr3                    125208129 28 - 202329955 AACTTGCTGTAGAAAGTCTGACTTCACT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842462 28 - 202140232 AACTTGCTGTAGAAAGTCTGACTTCACT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541893 28 -  28733288 AACTTGGTGTAGAAAGTCTGACTTCACT
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418576 28 - 125196307 AACTTGCTGTAAAATATCTAACCTCCCT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505260 28 - 155834243 AACTTGGTGTAGAAAGTCTAACTTCACT
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   995802 133 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225549126 2396 - 229590362 I

a score=108495.000000
s hg38.chr14_KI270722v1_random       134035 80 +    194050 AAACATCAGCAAACACACACAGGAGAGAAACCCCATGAATGTGTTGAATGTGAGAAACCCTCCATTAGCAAATCAGACCT
s panTro4.chr3                    125208157 80 - 202329955 AAACATCAGCAAACACACACAGGAGAGAAACCCTATGAATGTGTTGAATGTGAGAAACCCTCCATTAGCAAATCAGACCT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842490 80 - 202140232 AAACCTCAGCAGACACACACAGGAGAGAAACCCTATGAATGTGTTGAATGTGAGAAACCCTCCATTAACAAATCAGACCT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27541921 80 -  28733288 AATCATCAGCAAACACACACAGGAGAGACACCCTATGAATGTGTTGAATGTGAGAAACCCTCCATTAGCAAATCATACCT
i nomLeu3.chr24                   C 0 C 0
s rheMac3.chr1                    225551522 80 - 229590362 AAACATCAGAAAATACACACAGGAGAGAAACCCTATAAATGTGTACTATGTGAGAAATCCTTCATTAAGAAATCATACCT
i rheMac3.chr1                    I 2396 I 91
s papAnu2.chr9                      3418604 67 - 125196307 AAACATCAGCAA----ACACAGGACAAAAATTCTATGA---------ATGTGAGAAAATCCTAGTTAGAAAATCAGATCT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505288 77 - 155834243 AAA---CAGCAAACACACACAGGAGAGAAACCCTATGAATGTATCGAATGTGAGAAGCCCTTCATTAGTAAGTCAGACCT
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   995802 133 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I

a score=2161.000000
s hg38.chr14_KI270722v1_random       134115 3 +    194050 CAT
s panTro4.chr3                    125208237 3 - 202329955 TAT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842570 3 - 202140232 TAC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542001 3 -  28733288 TAC
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418671 3 - 125196307 TAT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505365 3 - 155834243 CAT
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   995802 133 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225551602 91 - 229590362 I

a score=-1078.000000
s hg38.chr14_KI270722v1_random       134118 3 +    194050 GAT-
s panTro4.chr3                    125208240 3 - 202329955 GAT-
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842573 3 - 202140232 AAT-
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542004 3 -  28733288 GAT-
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418674 3 - 125196307 AGT-
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505368 3 - 155834243 GAG-
i calJac3.chr7                    C 0 C 0
s otoGar3.GL873804                   995935 3 -   1077187 -ACA
i otoGar3.GL873804                I 133 I 270
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225551602 91 - 229590362 I

a score=78912.000000
s hg38.chr14_KI270722v1_random       134121 85 +    194050 ACAGCACAAGATGCCTACTGAGGAAAAACCTTATGCCTGTAACTGGTGTGAAAAATTGTTCAGCTATAAGTCCAGCCTCACTATC
s panTro4.chr3                    125208243 85 - 202329955 ACAGTGCAAGATGCCTACTGAGGAAAAACCTTATGCCTGTAACTGGTGTGAAAAATTGTTCAGCTATAAGTCCAGCCTCATTATC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842576 85 - 202140232 ACAGCACAAGATGCCTACTGGGGAAAAACTTTATTCCTGTAACTGGTGTGAAAAATTGTTCAGCTATAAGTCCAGCCTCACTATC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542007 85 -  28733288 ACAGCACAAGGTTCCTACTAAGGAAAAACCTTATGCCTGTAACTGGTGTGAAAAATTGTTCAGCTATAAGTGCAGCCTCACTGTC
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418677 84 - 125196307 ACATCAGAGGACACATAGAGGTGGAAAAAA-TGTGCATGCAGCCAGTGTGAGAAGTCCTTCGGCCATAAGTCAGGCCTTGAAATC
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505371 85 - 155834243 ACATCACAAGATGCCTAGAGAGAAAAAACCATATGTGTGTAACTGGTGTGAAAAATTATTCAGCCATAAGTCAAGCCTCACTATC
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   995938 270 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225551602 91 - 229590362 I

a score=98468.000000
s hg38.chr14_KI270722v1_random       134206 59 +    194050 CATCAGAGAATTCACACAGAGGAAAAGCCCTATGGATGCAATGAATGTGGAAAAACCTT
s panTro4.chr3                    125208328 59 - 202329955 CATCAGAGAATTCACACAGGGGAAAAGCCCTATGGATGCAATGAATGTGGAAAAACCTT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842661 59 - 202140232 CATCAGAGAATTCACACAGGGGAAAAGCCCTATGGATGCAGTGAATGTGGAAAAAGCTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542092 59 -  28733288 CATCAGAGAATTCACACAGGGGAAAAGCCCTATAGATGCAATGAATGTGGAAAAACCTT
i nomLeu3.chr24                   C 0 C 0
s rheMac3.chr1                    225551693 59 - 229590362 CATCAGAGAATCCACACAGGGGAAAAGCCCTATGAATGTCATGAATGTGGGGAAACCTT
i rheMac3.chr1                    I 91 I 343
s papAnu2.chr9                      3418761 59 - 125196307 CATGAGAGAATTCACACAGGGGAAAAGCTCTATggatgtaatgaatgtgggaaatccCT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505456 57 - 155834243 CATCATAGAATTCACACAGGGGAAAAGCCCTATGGATGCAATGAA--TGGAAAAACCTT
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   995938 270 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I

a score=94187.000000
s hg38.chr14_KI270722v1_random       134265 124 +    194050 TCGCTGTAAGTCATTCCTCACTTTACATCAGAGAACTCACACTGGGGATAAGCCCTACAAATGTATTGAATGTGGAAAAAC--TTCACTGTAAATCACTTCTCACTTTACATCACAGAACTCACTC
s panTro4.chr3                    125208387 124 - 202329955 TCGCCGTAAGTCATTCCTCACTTTACATCAGAGAACTCACAC--GGGATAAACCCTACAAATGTATTGAATGTGGAAAAACTTTTCACCATAAGTCACTTCTCACTTTACATCACAGAACTCACTC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842720 126 - 202140232 TCACCGTAAGTCATTCCTCACTTTACATCAGAGAACTCACACAGGGCTTAAACCCTACAAATGTATTGAATGTGGAAAAACTTTTCACCGTAAGTCACTTCTCACTTTACATCACAGAACTCACTC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542151 126 -  28733288 TCGCCGTAAGTCATTCCTCACTTCACATCAGAGAACTCACACAGGGGATAAACCCTACAAATGTATTGAATGTGGAAAAACTTTTCACCGTAAGTCACTTCTCACTTCACATCACAGAACTCACTC
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418820  42 - 125196307 ------------------------------------------------------------------------------------TTGCCAGAAGTCACACCCTATGATCCATCACAGAATTCACAC
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505513 124 - 155834243 TCACCGTAAGTCATTCCTCACTGTACATCAAAGAACTCACACAGAAGATAAACCCTACAAAGGTATTGAATGTGGAAAAAGTTTTCACCAT--GTCATTTCTCACTTTACATCACAGAACTCACTC
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   995938 270 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225551752 343 - 229590362 I

a score=2210.000000
s hg38.chr14_KI270722v1_random       134389 2 +    194050 AG
s panTro4.chr3                    125208511 2 - 202329955 AG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842846 2 - 202140232 AG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542277 2 -  28733288 AG
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418862 2 - 125196307 AA
i papAnu2.chr9                    C 0 C 0
s otoGar3.GL873804                   996208 2 -   1077187 AG
i otoGar3.GL873804                I 270 I 606
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e calJac3.chr7                    120505637 0 - 155834243 C
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225551752 343 - 229590362 I

a score=119270.000000
s hg38.chr14_KI270722v1_random       134391 114 +    194050 GGGAAAAGCCCTATCAGTGTAGTGAATGTGGAAAAACCTTTAGCCAGAAGTCATACCTCACAATACATCATAGAACTCACACCTGGCAAAAGCCCTATGCATGTGACCATTGTG
s panTro4.chr3                    125208513 114 - 202329955 AGGAAAAGCCCTATCAGTGTAGTGAATGTGGAAAAACCTTTAGCCAGAAGTCATACCTCACAATACATCATAGAACTCACACAGGGGAAAAGCCCTATGCATGTGACCATTGTG
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159842848 112 - 202140232 GGGAAAAGCCCTATCAGTGTAGTGAATGTGGAAAAATC--TAGCCAGAAGTCATACCTCACAATACATCATAGAACTCACACTGGGGAAAAGCCCTATGCATGTGACCATCGTG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542279 114 -  28733288 GGGAAAGGCCCTATCAGTGTAGTGAATGTGGAAAAACCTTTACCCACAAGTCATACCTCAAAATACATCATAGAATTCACACTGGGGAAAAGCCCTATGCATGTGACCATTGTG
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3418864 114 - 125196307 GAGAGAAACCCTGTGAATGTAACAAATGTGGTAAAACCTTCTGTGAGAAGTCAGCCGTCAACGTACATCAGAGAACTCTCACAGGGGAAATCCCCTGTGAATGTAATTAGTGTG
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120505637 114 - 155834243 GGGCAAAGCCCTATAAATGTAATGAATATGGAAAAACCTTTAGCCAGAAGTCATACCTCACAATACATCGTAGAACTCACACAGGGGAAAAGCCCTATGCATGTGACCATTGTG
i calJac3.chr7                    C 0 C 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e tupBel1.scaffold_113643.1-48647      3843 2995 -     48647 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   996210 606 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225551752 343 - 229590362 I

a score=-2005.000000
s hg38.chr14_KI270722v1_random      134505 1 +    194050 -A
s panTro4.chr3                   125208627 1 - 202329955 -A
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159842960 1 - 202140232 -A
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542393 1 -  28733288 -A
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3418978 1 - 125196307 -G
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120505751 1 - 155834243 -A
i calJac3.chr7                   C 0 C 0
s tupBel1.scaffold_16055.1-55437     46734 1 -     55437 C-
i tupBel1.scaffold_16055.1-55437 n 2995 n 2995
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225551752 343 - 229590362 I

a score=12918.000000
s hg38.chr14_KI270722v1_random      134506 16 +    194050 AAAAGCATTTAGCCAT
s panTro4.chr3                   125208628 16 - 202329955 AAAAGCATTTAGCCAT
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159842961 16 - 202140232 AAAAGCATGTAGCCAT
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542394 16 -  28733288 AAAAGCATTTAGCCGT
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3418979 16 - 125196307 GAAAACCGTTAGCAAG
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120505752 16 - 155834243 AAAACAATTTAGCCAC
i calJac3.chr7                   C 0 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225551752 343 - 229590362 I

a score=7833.000000
s hg38.chr14_KI270722v1_random      134522 4 +    194050 AAGT
s panTro4.chr3                   125208644 4 - 202329955 AAGT
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159842977 4 - 202140232 AAGT
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542410 4 -  28733288 AAGT
i nomLeu3.chr24                  C 0 C 0
s rheMac3.chr1                   225552095 4 - 229590362 AAGT
i rheMac3.chr1                   I 343 C 0
s papAnu2.chr9                     3418995 4 - 125196307 AAGT
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120505768 4 - 155834243 AAGT
i calJac3.chr7                   C 0 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I

a score=30802.000000
s hg38.chr14_KI270722v1_random      134526 24 +    194050 CAAAGCTTATTGTCCATCAGAGAA
s panTro4.chr3                   125208648 24 - 202329955 CAAGGCTTACTGTCCATCAGAGAA
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159842981 24 - 202140232 CAAGGCTTACTGTCCGTCAGATAA
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542414 24 -  28733288 CAAAGCTTACTGTCCATCAGAGAA
i nomLeu3.chr24                  C 0 C 0
s rheMac3.chr1                   225552099 24 - 229590362 CAAAACTTACTGTACATCAGAGAA
i rheMac3.chr1                   C 0 C 0
s papAnu2.chr9                     3418999 24 - 125196307 CAAACCTCAGGATATATCAGGGTA
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120505772 19 - 155834243 CAAGGCT-----TTCATCAGATAA
i calJac3.chr7                   C 0 C 0
s tarSyr2.KE936907v1                  2832 24 -      9042 CACACCTCTGTACACATCAGAGAA
i tarSyr2.KE936907v1             N 0 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I

a score=-2163.000000
s hg38.chr14_KI270722v1_random      134550 2 +    194050 -CA
s panTro4.chr3                   125208672 2 - 202329955 -CA
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843005 2 - 202140232 -CA
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542438 2 -  28733288 -CA
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3419023 2 - 125196307 -CT
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120505791 2 - 155834243 -TG
i calJac3.chr7                   C 0 C 0
s tarSyr2.KE936907v1                  2856 2 -      9042 TT-
i tarSyr2.KE936907v1             C 0 I 85
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225552123 0 - 229590362 C

a score=73678.000000
s hg38.chr14_KI270722v1_random      134552 72 +    194050 CACACAGGGGAAAAGCCCTATGAATATAATGAGTGT-AGAAAACCCTTTATCAATAAGTCAAACCTC---AGGATA
s panTro4.chr3                   125208674 72 - 202329955 CACACAGGGGGAAAACCCTATGAATGTAATGAGTGT-GGAAAACCCTTTATCAATAAGTCGAACCTC---AGGATA
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843007 72 - 202140232 CACACAGGGGAAAAACCCTATGAATGTAATGAGTGT-GGAAAACCCTTTATCAATAAGTCAAACCTC---AGGATA
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542440 72 -  28733288 CACACAGGGGAAAAACCCTATGAATGTAACGAATGT-GGAAAACCCTTTATCAATAAGTGGAACCTC---AGGATA
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3419025 75 - 125196307 TACACAGGTGAGAAACCAtatgaatgtaaagaatgtaGGAAAACTTTCTACCCA-AAGTCAAAACTCACTACTACA
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120505793 72 - 155834243 CACACAGGGGAAAAACCCTATGAAGGTACTGAATGT-GGAAAACTCTTTATCAATAAGTTAAACCTC---AGGATA
i calJac3.chr7                   C 0 I 667
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e tarSyr2.KE936907v1                  2858 85 -      9042 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225552123  0 - 229590362 C

a score=17290.000000
s hg38.chr14_KI270722v1_random      134624 13 +    194050 CATCAGAGAACTC
s panTro4.chr3                   125208746 13 - 202329955 CATCAGAGAACTC
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843079 13 - 202140232 CATCAGAGAACTC
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542512 13 -  28733288 CATCAGAGAACTC
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3419100 13 - 125196307 TATCAGAGGACTC
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120506532 13 - 155834243 CATCAGAGAACTC
i calJac3.chr7                   I 667 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e tarSyr2.KE936907v1                  2858 85 -      9042 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225552123  0 - 229590362 C

a score=48584.000000
s hg38.chr14_KI270722v1_random      134637 79 +    194050 ACAT---TTGAAAAACCCTATGAATGCAATGAATGTGGGATAACGTTTCACCAAAAGTCGTTCCTCACTGTCCATCAAAGGG
s panTro4.chr3                   125208759 81 - 202329955 ACAC-AGGGGAAAAACCCTATGAATGCAATGAATGTGGGAAAACGTTTCACCGTAAGTCATTCCTCACTGTCCATCAAAGGA
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843092  4 - 202140232 ACAC------------------------------------------------------------------------------
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542525 81 -  28733288 ACAC-AGGGGAAAAACCCTATGAATGCAATGAATGTGGGAAAACGTTTCACTGTAAGTTCTTCCTCACTGCCCATCAAAGGA
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3419113 81 - 125196307 ACAC-AGCAGAAAAACCCTATGGATAGAAGGAATGTGGGAAACTGTTTCACTGCAATTCAGTCCTCACTGTacatcagagaa
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120506545 82 - 155834243 ACACTGGGAAAAAAACCATATGAATGTAATGAATATGGGAAAACCTTTCACCATAAGTCCTTTGTCACTGTCCATCAGAGAA
i calJac3.chr7                   C 0 C 0
s tarSyr2.KE936907v1                  2943 80 -      9042 ACAC-CAGGGAGAAACCCTACAAATGTGATGAATGTGGGAAAACTTTCTCTGTGAAGTCATATGTTAGTG-ACATCAGAGAG
i tarSyr2.KE936907v1             I 85 I 214
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225552123  0 - 229590362 C

a score=290518.000000
s hg38.chr14_KI270722v1_random      134716 219 +    194050 CTCACAC-AGGCAAAAAACCCTACGAATGCAATGAACGTGGGAAAACCTTTCACCGTAAGTCATTCCTCACTGTCCATCAGAGAACTCATACTGGGGAAAAACCATATGCATGTAACAAATGTGGAAAAACGTATAGCCACAAGTCATAACTTACAGTACCTCACAGAACTCACACAGGGGAAAAACCCTATGAAAGTAATGAATGTGGAAAATCCTTTT
s panTro4.chr3                   125208840 215 - 202329955 CTCACAC-AGGGGAAAAACCCTATGAATGCAATGAATGTGGGAAAATCTTTTGCTGTAAGTCATTCCTCACTGTCCATCAGAGAACTCATGCTGGGGAAAAACCATATGCATGTAACAAATGTGGAAAAACATATAGCCACAAGTCATACCTTACAGTACATCACAGAACT----CAGGGGAAAAACCCTATGAATGTAATGAATGTGGAAAATCCTTTC
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843096 209 - 202140232 ----------GGGAAAAACCCTATGAATGCAATGAATGTGGGAAAACCTTTCACTGTAAGTAATTCCTCACTGTCCATCAGAGAACTCATACTGGGGAAAAACCATATGCATGTAATGAATATGGAAAAACATATAGCCACAAGTCATACCTTACAGTACATCACAGAACTCACACA-GGGAAAAACCCTATGAATATAATGAATGTGGAAAATCCTTTC
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542606 219 -  28733288 CTCACAC-AGGAGAAAAACCCTACGAATGCAATGAATGTGGGAAAACCTTTCGCAGTAAGTCAGTCCTCACTGCCCATCAGAGAACTCATACTGGGGAAAAGCCATATGCATGTAATGAATGTGGAAAAACATATAGCCAAAAGTCATACCTTACAGTACATCACAGAAGTCACACAGGGGAAAAACCCTATGAATGTAATGAATGTGGAAAATCCTTTT
i nomLeu3.chr24                  C 0 C 0
s rheMac3.chr1                   225552123 219 - 229590362 CTCACAC-AGGAGAAAAACCCTATGAATGTAATGAATGTGGAAAAACATTTTGCCTGAATTCAGTTCTCATTATACATCAGAGAACTCACACAGGTGAGAAACCATATGAATGTAATAAATGTGGAAAAACCTTTAGCCAGAAGTCAAACCTCAGGATGCATCAGGGTACTCACACAGGTGAAAAACCCTATGAGTGTAGTGAATGTGGGAAAACCTTCT
i rheMac3.chr1                   C 0 C 0
s papAnu2.chr9                     3419194 219 - 125196307 ctcacac-aggAGAAAACCCCTATGcatgtaaagaatgtgggaacTTACTTCACTGGAAGTCAGTTCACACTGAacatcagagaactcacacaggAGAAAACCCCTATGcatgtaaagaatgtgggaaatTATTTCACTGGAAGTCCGTCCTTCCTGTACATCAGAGAACATACACAGGAGAAAACCCCTATGCGTGTAAAGAATGTGGGAACTTATTTC
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120506627 216 - 155834243 CTCACACTGGGAAAAAAACCATATGAATGTAATGAATATGGGAAAACCTTTCACCGTAAGTCCTTTCTCACTGTCCATCAGAGAACTCACACTGGGGAAAAACTATATGAATGTATTGAATATGGAAAAACATAAAGCCACAAATCATACCTTACAATACATCACAGAACT----CAGGGGGAAAACCCTATGAATGTAATGAATGAGGAAAATCCTTTT
i calJac3.chr7                   C 0 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e tarSyr2.KE936907v1                  3023 214 -      9042 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I

a score=3850.000000
s hg38.chr14_KI270722v1_random      134935 2 +    194050 AC
s panTro4.chr3                   125209055 2 - 202329955 AC
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843305 2 - 202140232 AC
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542825 2 -  28733288 AC
i nomLeu3.chr24                  C 0 C 0
s rheMac3.chr1                   225552342 2 - 229590362 AC
i rheMac3.chr1                   C 0 I 20
s papAnu2.chr9                     3419413 2 - 125196307 AC
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120506843 2 - 155834243 AC
i calJac3.chr7                   C 0 C 0
s tarSyr2.KE936907v1                  3237 2 -      9042 TC
i tarSyr2.KE936907v1             I 214 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I

a score=-6495.000000
s hg38.chr14_KI270722v1_random      134937 10 +    194050 ---------TGTAAGTTAT
s panTro4.chr3                   125209057  3 - 202329955 ---------TG-------T
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843307  3 - 202140232 ---------TG-------G
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542827  3 -  28733288 ---------TG-------T
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3419415  3 - 125196307 ---------TG-------G
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120506845  3 - 155834243 ---------TG-------T
i calJac3.chr7                   C 0 C 0
s tarSyr2.KE936907v1                  3239 10 -      9042 CTTAACTCAT---------
i tarSyr2.KE936907v1             C 0 N 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225552344 20 - 229590362 I

a score=14527.000000
s hg38.chr14_KI270722v1_random      134947 13 +    194050 AAGTCATTTCTAA
s panTro4.chr3                   125209060 13 - 202329955 AAGTCATTCCTAA
i panTro4.chr3                   C 0 C 0
s ponAbe2.chr3                   159843310 13 - 202140232 AAGTCATTCCTAA
i ponAbe2.chr3                   C 0 C 0
s nomLeu3.chr24                   27542830 13 -  28733288 AAGTCAGTCCTAA
i nomLeu3.chr24                  C 0 C 0
s papAnu2.chr9                     3419418 13 - 125196307 AAGTCAGTTCTTA
i papAnu2.chr9                   C 0 C 0
s calJac3.chr7                   120506848 13 - 155834243 AAGTCATTCCTAA
i calJac3.chr7                   C 0 C 0
e rhiRox1.KN299240v1               1530874 15689 +   1849528 I
e tupBel1.scaffold_16055.1-55437     46735 2995 -     55437 I
e panPan1.JH650580                19682700 4828 -  19803153 I
e otoGar3.GL873804                  996210 606 -   1077187 I
e gorGor3.chr3                   122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random       25630 41825 +     87690 I
e rheMac3.chr1                   225552344 20 - 229590362 I

a score=197942.000000
s hg38.chr14_KI270722v1_random       134960 150 +    194050 CTATACATCAGAGAACTCATGCTAGC-AAA----AAACCCTATGAATGTATTGAATGTGAGAAAACCTTTATCAATAAGTTAAACCTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCAATTAATGTAATGAATGTGGGAAAACCGTTC
s panTro4.chr3                    125209073 150 - 202329955 CTATACATCAGAGAACTCATGCTGGC-AAA----AAACCCTATGAATGTAATGAATGTGAGAAAACCTTTATCAATAAGTTAAACCTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCTATGAATGTAATGAATGTGGAAAAACCTTTC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159843323 150 - 202140232 CTATACGTCAGAGAACTCATACTGGC-AAA----AAACCCTATGAATACAATGAATGTGAGAAAACCTTTATCAATAAGTTAAACCTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCTATGAATGTAATGAATGTGGAAAAACCTTTC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27542843 147 -  28733288 CTGTACATCAGAGAACTCATACTGGCAAAA----AAACCCTGTGAATGTAATGAATGTGAGAAAACCTTTATCAATAAGTTAAACCTTGGGATACACAAGAGAGCT----CAGGGGAAAGATCCTATGAATGTAATGAATGTGGAAAAACCTTTC
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3419431 152 - 125196307 CTGTATATCAGAGAACACATG-GGGC-AGAgggggggCCCTATGAATGCATTGAGTGTGGAAAAACTTTT-TCCATAAGTCAAACCTAATGATTCATCAAAAAACTCACACaggtgagaaaccctatgaatgtaaagaatgtagaaaaacttTCT
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120506861 150 - 155834243 ATATACATCAGAGAACTCAGAATGGC-AAA----AAACCTTATGAACGTAATGAATGTGAGAAAACCTTTATCGATAAGTTAAACCTTAGGATACATAAGCAAACTCACATGGGGGAAAGACCCTGCAAATGTAGTGAACGTGGAAAAACCTTTT
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_113643.1-48647      6838 150 -     48647 CAAAACATCAGAGAACACATACCGGG-GAG----AAGCCCTATGCATGCAATGAATGTGAGAAATCCTTCAGCCATAAGTCAGACCTAACTGTTCATCAGAGAATTCACACAGGAGAAAAACCCTATGAATGTTACCAATGTGGAAAAACCTTTT
i tupBel1.scaffold_113643.1-48647 I 2995 N 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19682700 4828 -  19803153 I
e otoGar3.GL873804                   996210 606 -   1077187 I
e gorGor3.chr3                    122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225552344  20 - 229590362 I

a score=123119.000000
s hg38.chr14_KI270722v1_random    135110 124 +    194050 GTCAGAAGTCAAATCTCAGCACACATCAGGGAACTCACACAGGGGAGAAACCTTACATATGAAATGAATGTTGAAAAACCTTTCATGGCAAGTCATTCCTCACCGTACACCAGAGAACTCACAC
s panTro4.chr3                 125209223 124 - 202329955 GTCAGAAGTCAAATCTCAGCACCCATCAGGGAACTCACACAGGAGAGAAACCTTACGTATGTAATGAATGTGGAAAAACCTTTCATCGCAAGTCATTCCTCACCATACACCAGAGAACTCACAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159843473 124 - 202140232 ATCAGAAATCAAATCTCAGCACCCATCAGGGAACTCACACAGGGGAGAAACCTTACATATGTAATGAATATGGAAAAACCTTTCATCACAAGTCATTCCTCACTGTACACCGGAGAACTCTCAC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27542990 124 -  28733288 ATCAGAAGTCAAATCTCAGCAGCCATCAGGGAACTCACACAGGGGAGAAACCTTACGTATGTAATGAATGTGGAAAAACCTTTCAGCACAAGTCATTCCTCAGCGTACACCGGAGAACTCACAT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3419583 124 - 125196307 CACAGAGGCCAGTCCCCACAGTACATCAGAAAATTCACTCTGGAGGGAAACCACACGAATGTAAAGAATGTAAGAAAACTTTATCCTAGAAGTCAGCCCCCACTGTACATCAGAGAGCTCACAC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507011 122 - 155834243 GTCAGAAGTCAAATCTCAGCACCCATCAGGGCACTCACAC--GGGAAAAACCTTACAAATGTAACGAATGTGGAAAAGCCTTTCATCGCAAGTCATTCCTCACTGTACACCAGAGAACTCACAC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19682700 4828 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e gorGor3.chr3                 122245425 2947 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552344  20 - 229590362 I

a score=1911.000000
s hg38.chr14_KI270722v1_random    135234 1 +    194050 A
s panTro4.chr3                 125209347 1 - 202329955 A
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19687528 1 -  19803153 A
i panPan1.JH650580             I 4828 I 208
s gorGor3.chr3                 122248372 1 - 199944510 A
i gorGor3.chr3                 I 2947 I 109
s ponAbe2.chr3                 159843597 1 - 202140232 A
i ponAbe2.chr3                 C 0 C 0
s papAnu2.chr9                   3419707 1 - 125196307 A
i papAnu2.chr9                 C 0 I 1
s calJac3.chr7                 120507133 1 - 155834243 A
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873804                996210 606 -   1077187 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552344 20 - 229590362 I
e nomLeu3.chr24                 27543114 0 -  28733288 C

a score=7620.000000
s hg38.chr14_KI270722v1_random    135235 4 +    194050 GGGG
s panTro4.chr3                 125209348 4 - 202329955 GGGG
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122248482 4 - 199944510 GGGG
i gorGor3.chr3                 I 109 C 0
s ponAbe2.chr3                 159843598 4 - 202140232 GGGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543114 3 -  28733288 -GGG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3419709 4 - 125196307 GGGG
i papAnu2.chr9                 I 1 C 0
s calJac3.chr7                 120507134 4 - 155834243 GGGG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687529 208 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552344 20 - 229590362 I

a score=20397.000000
s hg38.chr14_KI270722v1_random       135239 16 +    194050 AGAAACAGTATGGATG
s panTro4.chr3                    125209352 16 - 202329955 AAAAACCGTATGGATG
i panTro4.chr3                    C 0 C 0
s gorGor3.chr3                    122248486 16 - 199944510 AAAAGCCCTATCAGTG
i gorGor3.chr3                    C 0 C 0
s ponAbe2.chr3                    159843602 16 - 202140232 AAAAACCGTATGGATG
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27543117 16 -  28733288 AAAAACCGTGTGGATG
i nomLeu3.chr24                   C 0 C 0
s papAnu2.chr9                      3419713 16 - 125196307 GAAAACCCTGTGAATG
i papAnu2.chr9                    C 0 C 0
s calJac3.chr7                    120507138 16 - 155834243 AAAAGGCTTATCAATG
i calJac3.chr7                    C 0 C 0
s tupBel1.scaffold_112329.1-52333      8023 16 +     52333 AGACTCGCTATGAATG
i tupBel1.scaffold_112329.1-52333 N 0 N 0
e rhiRox1.KN299240v1                1530874 15689 +   1849528 I
e panPan1.JH650580                 19687529 208 -  19803153 I
e otoGar3.GL873804                   996210 606 -   1077187 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225552344 20 - 229590362 I

a score=49186.000000
s hg38.chr14_KI270722v1_random    135255 44 +    194050 -AACCAAGGTGGAAAAACTTTTTGTCAGAAATCATACCTTATTAT
s panTro4.chr3                 125209368 45 - 202329955 TAATGAATGTGGAAGAACTTTTTGTCAGAAATCATACCTTATTAT
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122248502 45 - 199944510 TAGTGAATGTGGAAAAACCTTTAGCCAGAAGTCATACCTCACAGT
i gorGor3.chr3                 C 0 C 0
s ponAbe2.chr3                 159843618 45 - 202140232 TAATGAATGTGGAAAAACTTTTTGTCAGAAATCATACCTTATTAT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543133 45 -  28733288 TAATGAATGTGGAAAAACTTTTTGTTGGAAATCATACCTTATTAT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3419729 36 - 125196307 TA---------GGAAAACATTCTACAAAAAGTCAGAACTCACTAT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507154 42 - 155834243 TAGTGAATGTGGAAAAACGTTTTGTCAGAAATCTTACCTTAT---
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687529 208 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552344 20 - 229590362 I

a score=56868.000000
s hg38.chr14_KI270722v1_random    135299 28 +    194050 ACATCAGAGAACTCACACTGGGGAAAAG
s panTro4.chr3                 125209413 28 - 202329955 ACATCAGAGAACTCACACCGGGGAAAAG
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122248547 28 - 199944510 ACATCATAGAACTCACACAGGGGAAAAG
i gorGor3.chr3                 C 0 I 760
s ponAbe2.chr3                 159843663 28 - 202140232 ACATCAGAGAACTCACACCAGGGAAAAG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543178 28 -  28733288 ACATGAGAGAACTCACACCAGGGAAAAG
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225552364 28 - 229590362 ACATCAGAGGACTCACACAGGGGAAAAA
i rheMac3.chr1                 I 20 C 0
s papAnu2.chr9                   3419765 28 - 125196307 ACGTCAGAGAACTCACACAGGataaaaa
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507196 28 - 155834243 ACATCACAGAATTCACACTGGTGAAAAG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687529 208 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=77592.000000
s hg38.chr14_KI270722v1_random    135327 35 +    194050 CCCTATGAATGTAATGAATGTGGAAAATCCTTTCA
s panTro4.chr3                 125209441 35 - 202329955 CCCTATGAATGTAATGAATGTGGAAAATCCTTTCA
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122249335 35 - 199944510 CCCTATGAATGTAATGAATGTGGAAAATCCTTTCA
i gorGor3.chr3                 I 760 I 81
s ponAbe2.chr3                 159843691 35 - 202140232 CCCTATGAATGTAATGAATGTGGAAAATCCTTTAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543206 35 -  28733288 CCCTGAGAATGTAATGAATGTGGAAAATCCTTTCA
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225552392 35 - 229590362 CCCTATGAGTGTAATGAATGTGGGAAAACTTTTAG
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3419793 35 - 125196307 ccctatgaatgtaatgaGTGTGGAAAGTCATTTTG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507224 35 - 155834243 CCCTATGAATGTAATGAATGTGGAAAATCCTTTCG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687529 208 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=106408.000000
s hg38.chr14_KI270722v1_random    135362 81 +    194050 TCAGAAGGCAAATCTTCGGAAGCATCCAGATATTCACACAGGGGAGAAACCCTATGAATGTAGCGAATGTGGAAAAACCTT
s panTro4.chr3                 125209476 81 - 202329955 TCAGAAGGCAAATCTTCAGAAGCATCAAGTTATTCACACGGGGGAGAAACCCTATGAATGTAGCAAATGTGGAAAAACCTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159843726 81 - 202140232 TCAGAAGGCAAATCTTCAGAAGCATCAAGGTATTCACATGGGGGAGAAACCCTCTGAATGTAGCAAATGTGGAAAAACCTT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543241 81 -  28733288 TCAGAAGGCAAATCTTCAGAAGCATCAAGGTATTCACACGGGAGAGAAACCCTATGAATGTAGCAAATGTGGAAAAACCTT
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225552427 81 - 229590362 CCAGAAGTCAAACCTGAGGATGCATCAGAGTACTCACACAGGGGAGAAACCCTACGAATGTAATGAATGTGGAAAATCCTT
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3419828 80 - 125196307 CCTAAAGTGAGTCCTCACTAGAGATCAGCGAACTCACAT-GGGGAAAAGCACTTTGAATGCAATGCATGTGGGAAAACCTC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507259 81 - 155834243 TCAGAAGGCAAATCTCTGGAAGCATCAAGGTATTCACACAGGGGAGAAACACTATGAATGTAGTGAATGGGGAAAAACCTT
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687529 208 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e gorGor3.chr3                 122249370 81 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=2773.000000
s hg38.chr14_KI270722v1_random    135443 2 +    194050 CA
s panTro4.chr3                 125209557 2 - 202329955 CA
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19687737 2 -  19803153 CA
i panPan1.JH650580             I 208 I 1381
s gorGor3.chr3                 122249451 2 - 199944510 CA
i gorGor3.chr3                 I 81 I 1379
s ponAbe2.chr3                 159843807 2 - 202140232 CA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543322 2 -  28733288 CA
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225552508 2 - 229590362 CT
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3419908 2 - 125196307 CC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507340 2 - 155834243 TA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e otoGar3.GL873804                996210 606 -   1077187 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=33035.000000
s hg38.chr14_KI270722v1_random    135445 19 +    194050 GTCAGAAGTCAGTCCTCAC
s panTro4.chr3                 125209559 19 - 202329955 GTCAGAAGTCAGTCCTCAC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159843809 19 - 202140232 GTCAGAAGTCAGTCCTCAC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543324 19 -  28733288 GTCAGAAGTCAGTCCTCAC
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225552510 19 - 229590362 ACCAGAAGTCAGTGCTCAC
i rheMac3.chr1                 C 0 C 0
s papAnu2.chr9                   3419910 19 - 125196307 ACCTGAAGTCAGTCCTCAC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507342 19 - 155834243 GTCAGAAGTCAGTCCTCAC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=221489.000000
s hg38.chr14_KI270722v1_random    135464 215 +    194050 TGTCCATCATAGAACCCATACTGGAGAAAAG-CCTTACGAATGTAATGAGTGTGGGAAAACCTTTTGTCACAAGTCAAACCTCAATATGCATCAGGGAATTCACTCAGGAGAGAGAAAACCTGTGAATGTGATGAATGT-AGGAAAACTTTTTACCATAAGGCAGTTCTCACCATACATCAGAGAATTCAC-----ACAGGTGAGAAGTCATTTGAATGTAA----------
s panTro4.chr3                 125209578 222 - 202329955 TGTACATCATAGAACCCATACCGGAGAAAAA-CCTTATGAATGTAATGAGTGTGGGAAAACCTTTTGTCACAAGTCAAACCTCAGTACGCCTCAGGGAACTCACTCAG--GAGAGAAACCCTATGAATGTGATGAATGT-AGGAAAACTTTTTACAATAAGACAGTTCTCACCATACATCAGAGAACTCAC-----ACAGGTGAGAAGCCATTTGAATGTAAAGAATGT-AG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159843828 222 - 202140232 TGTACATCATAGAACCCATACTGGAGAAAAA-CCTTATGAATGTAATGAGTGTGGGAAAACCTTTTGTCACAAGTCAAACCTCAATATGCATCAGGGAACTCAGTCAG--GAGAGAAACCCTATGAATGTGATGAATGT-AGGAAAACTTTTTACCATAAGACAGTTCTCACCATACATCAGAGAACTCAC-----ACAGGTGAGAAGCCATTTGAATGTAAAGAATGT-AG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543343 222 -  28733288 TGTATATCATGGAACCCATACTGGAGAAAAA-CCTTATGAATGTAATGAGTGTGGGAAAACCTTTTGTCACAAGTCAAACCTCAATATGCATCAGGGAACTCACTCAG--CAGAGAAACCCTATGACTGTGATGAATAT-AGGAAAACTTTTTACCATAAGACTGTTCTCACCATACATCAGAGAACTCAC-----ACAGGTGAGAAGCCATTTGAATGTAAAGAATGT-AG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3419929 225 - 125196307 TATacatcagagaactcacacaggGGGGAAACCCCTAGGAATGTAGTAGATGTGGAAAAACCTTCCATCTGAAGTCAGTCCTCACTATACATCAGAGAACTCACGCAG--TGGGGAACCCCTAGGAATGTAGTGGATGTGGGGAAAACCTCCCACCTGAAGTCAGTCCTCACTATacatcagagaactcac-----acagTGGGGAACCCCTAGGAATGTAGTGGATGTGGG
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507361 228 - 155834243 TATACATCATAGAACTCATACAGGGGAAAAAACCTCATGAATGTAATGAGTGTAGAAAAACCTTTTGTCACAAGTCAAACCTCAACACACATCAGCGTACTCACTTAG--GAGAGAAACCCTATGAATGTAATGAATGC-AGGAAAACATTTTACCATAAGACAGTTCTCACTATACGTCAGAGAACTCACAGAGAACAGGTTAGAGACCATTTGAATGTAAAGAATGT-AG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996210 606 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552529   0 - 229590362 C

a score=7403.000000
s hg38.chr14_KI270722v1_random    135679 8 +    194050 GAAAACCT
s panTro4.chr3                 125209800 8 - 202329955 GAAAACCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844050 8 - 202140232 GAAAACCT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543565 6 -  28733288 GAAAAC--
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420154 8 - 125196307 GAAGACCC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507589 8 - 155834243 GAAAACTT
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                996816 8 -   1077187 AAAGAACT
i otoGar3.GL873804             I 606 I 266
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552529 0 - 229590362 C

a score=100174.000000
s hg38.chr14_KI270722v1_random    135687 106 +    194050 TCTCCCAGGAGTCAAAACCCTTTGTACAGCACAGAACTCACACAGAGGAAAAACCCTTTAGAAGTAATGAATGTAGGAAAATTTTCTCCCAGAAGTCAGGCCTCAG
s panTro4.chr3                 125209808 106 - 202329955 TCTCCCAGAAGTCAAAACTCTTTGTACATCACAGAACTCACACAGGGGAAAAACCCTTTAGATGTAATGAATGTAGGAAAACTTTCTCCCAGAAGTCAGGCCTCAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844058 106 - 202140232 TCTCCTAGAAGTCAAAACTCTTTGTAAATCACAGAACTCACACAGGGGAAAAACCCTTTAGATGTAATGAATGTAGGAAAACTTTCTCCCAGAAGTCAGGCCTCAG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543571 103 -  28733288 -GTCCCAGAAGTCAAAACTCTTTGTACATAACAGAACTCACAC--GGGAAAAACCCTTTAGATGTAATGAATGTAGGAAAACTTTCTCCCAGAAGTCAGGCCTCAG
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420162 104 - 125196307 TCTGCCAGAAGTCAGTCCTGACTCTGCATCAGAGACCTCACACAGGTGAGACACCATTTGAGTGTAAAAGGTATAGGAAAAC--TCTACCAGAAGTCAATCCTCAC
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507597 101 - 155834243 TCTCCCAGAAATCAAAACTCTTTGTACTTCAGAGAACTCATACAGGGGAAAAACCTTATAAATGTA-----TGTAGGAAAACTTTCTCCCAGAAGTCTGGCCTCAC
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996824 266 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552529   0 - 229590362 C

a score=102183.000000
s hg38.chr14_KI270722v1_random    135793 71 +    194050 TATACATCAGAGAACACACACAGGAGAAAAACCTTATGAATGTAAGGAATGTGGGAAAACCTTTTGCCAGA
s panTro4.chr3                 125209914 71 - 202329955 TATACATCAGAGAACACACGCAGGAGAAAAACCTTATGAATGTAAGGAATGTGGGAAAACCTTTTGCCAGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844164 71 - 202140232 TATACATCAGAGAACACACATAGGAAAAAAACCTTATGAATATAAGGAATGTGGGAAAACCTTTTGCCAGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543674 71 -  28733288 TATACATCAGAGAACACACACAGGAGAAAAACCTTATGAATGTAAAGAATGTGGGAAAACCTTTTGCCAGA
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225552529 71 - 229590362 CACACATCAGAGAACTCACACAGGAGAAAAACCCTTCAAGTGTAACGAATGTGGAAAAACCTTTCGTCAGA
i rheMac3.chr1                 C 0 T 48863
s papAnu2.chr9                   3420266 67 - 125196307 AGTACATCACAG----CACAGTGGAAAAATACATTATCAGTGTGTTGAGTGTGGAAAATCCTTTTGCCACA
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507698 71 - 155834243 TGTACATCAGAGAACACACACAGGAAGAAAACCTTATGAATGTAAGGAATGTGGAAAAACCTTTTGCCAGA
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996824 266 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I

a score=111073.000000
s hg38.chr14_KI270722v1_random    135864 109 +    194050 AGTCACACCTCAGCAGGCATCAACAAACCCATATAGGAGAGAAATCTGATGTAGCTGAGGCAGGCTATGCATTCCCTC-AAAATCACTT-TTTTTCCCCTTGAACACACAA
s panTro4.chr3                 125209985 109 - 202329955 AGTCACACCTCAGCAGGCATCAACAAACCCATATAGGAGAGAAATCTGAAGTAGCTGAGGCAGGCTATGTGTTCCCTC-AAAATCACTC-TTTTTTCCCTTGAACACACAA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844235 109 - 202140232 AGTCACACCTCAGCAGGCATCAACAAACCCATATAGGAGAGAAATCTGATGTAGCTGAGGCAGGCTATGTGTTCCCTC-AAAATCACTC-TTTTTTCCCTTGAACACACAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543745 109 -  28733288 AGTCACACCTCAGCAGGCATCAACAAACCCATATAGGAGAGAAATTTGATGTAGCTGAGGCAGGCTATGTGTTCCCTC-AAAATCACTC-TTTTTTCCCTTGAACCCACAA
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420333 107 - 125196307 AATCATACCTCCAAAAGCATCAGATAGCTCATAGAAGGGAGAAATTCTGTGTGGCAGAGACCAGTTATGTGTTTCCAC-AAAAACATCC-TCTTTTCTCC--AACACACAA
i papAnu2.chr9                 C 0 I 5
s calJac3.chr7                 120507769 111 - 155834243 AGTCACAGCTCAGCAGGCATCAGCAAACTCATAGAGGGGAGAAATCTTACGTAGCTGAGGCAGCCTATGTGTTTCCTCAAAAATCACTCTTTTTTTCTCTTAAACACACAG
i calJac3.chr7                 C 0 C 0
e rhiRox1.KN299240v1             1530874 15689 +   1849528 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996824 266 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-3315.000000
s hg38.chr14_KI270722v1_random    135973 2 +    194050 -CG
s panTro4.chr3                 125210094 2 - 202329955 -CC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844344 2 - 202140232 -CC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543854 2 -  28733288 -CC
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420445 1 - 125196307 -C-
i papAnu2.chr9                 I 5 C 0
s rhiRox1.KN299240v1             1546563 1 +   1849528 -c-
i rhiRox1.KN299240v1           I 15689 N 0
s calJac3.chr7                 120507880 2 - 155834243 CC-
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996824 266 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=5063.000000
s hg38.chr14_KI270722v1_random    135975 12 +    194050 TACACCTCTCTG---
s panTro4.chr3                 125210096 12 - 202329955 TACACCTCTCCA---
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844346 12 - 202140232 TACACCTCTACG---
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543856 12 -  28733288 TACACCTCTCCG---
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420446 15 - 125196307 TGCATTTCTCAGCTT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507882 10 - 155834243 --TGGATCTCTG---
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                996824 266 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-2385.000000
s hg38.chr14_KI270722v1_random    135987 1 +    194050 -G
s panTro4.chr3                 125210108 1 - 202329955 -G
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844358 1 - 202140232 -G
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543868 1 -  28733288 -G
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420461 1 - 125196307 -C
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507892 1 - 155834243 -G
i calJac3.chr7                 C 0 C 0
s otoGar3.GL873804                997090 1 -   1077187 c-
i otoGar3.GL873804             I 266 I 97
e panPan1.JH650580              19687739 1381 -  19803153 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=78992.000000
s hg38.chr14_KI270722v1_random    135988  87 +    194050 CTACTATTA---TAGATTTCTCCAT------GCTCAGTCTAGGAGAATATGGACAAA----------------------------------AATGGTGACCATTACTTCCTGGCCTACCAAC-AAGAAGGT
s panTro4.chr3                 125210109  87 - 202329955 CTACTATTA---TAGATTTCTCCAT------GCTCAGTCTAGGAGAATATGGACACA----------------------------------AATGGTGACCATTACCTCCTGGCCTACCAAC-AAGAAGGT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844359 121 - 202140232 CTACTATTA---CAGATTTCTCCAT------GCTCGGTCTAGGAGAATATGGACAGATTTCTCCATGCTCGGTCTAGGAGAATGGGCTAGGAATGGTGACCATTACCTCCTGGCCTACCAAC-AAGAGGGT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543869  87 -  28733288 CTACTATTA---TAGATTTCTCCAT------GCTCGGTTTAGGAGAATATGGACACA----------------------------------AATGGTGACCATTAGCTCCTGGCCTACCAAC-AAGAAGGT
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420462  94 - 125196307 CCATCATTA---TGGATGGCTTCATGTAACAGCTCTGCCTGGGAGAATATGGACACA----------------------------------AGTGGTGAACATTACTTCCAGGCCTGGCAGCGAAAAAGGT
i papAnu2.chr9                 C 0 C 0
s calJac3.chr7                 120507893  89 - 155834243 CTACTGTTAGGGTAGATTCCTCCAT------GTTCTGTCTAGCAGAATATGGACACA----------------------------------AGTGGTGAATATT-CTTTCAGGCCTTCCAGC-Aagaaggt
i calJac3.chr7                 C 0 C 0
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                997091  97 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1260.000000
s hg38.chr14_KI270722v1_random    136075 1 +    194050 -C
s panTro4.chr3                 125210196 1 - 202329955 -C
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844480 1 - 202140232 -C
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543956 1 -  28733288 -C
i nomLeu3.chr24                C 0 C 0
s papAnu2.chr9                   3420556 1 - 125196307 -C
i papAnu2.chr9                 C 0 n 0
s calJac3.chr7                 120507982 1 - 155834243 -c
i calJac3.chr7                 C 0 I 24
s otoGar3.GL873804                997188 1 -   1077187 G-
i otoGar3.GL873804             I 97 C 0
e panPan1.JH650580              19687739 1381 -  19803153 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1936.000000
s hg38.chr14_KI270722v1_random    136076 3 +    194050 TTa
s panTro4.chr3                 125210197 3 - 202329955 TTa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844481 3 - 202140232 TTa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543957 3 -  28733288 TTa
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120508007 3 - 155834243 caa
i calJac3.chr7                 I 24 C 0
s otoGar3.GL873804                997189 3 -   1077187 TCA
i otoGar3.GL873804             C 0 I 8116
e panPan1.JH650580              19687739 1381 -  19803153 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=36380.000000
s hg38.chr14_KI270722v1_random    136079 48 +    194050 acaatgctgtaacagaagtgctatcatgcaggctttcttgttcccatt
s panTro4.chr3                 125210200 48 - 202329955 accatgctgtaacagaagtcctatcacgcaggctttgttgttctcatt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844484 48 - 202140232 accatgctgtaacagatgtgctatcatgcaggctttcttgttcccatt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27543960 48 -  28733288 accatgctgtaacagatgggctattatacaggctttcttgttcccatt
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120508010 48 - 155834243 accatgctgcaacaagtgtactgtcatgcaggctttcttgttccCATT
i calJac3.chr7                 C 0 I 17
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=8188.000000
s hg38.chr14_KI270722v1_random    136127 16 +    194050 tttacagcacacttcg
s panTro4.chr3                 125210248 16 - 202329955 tttacagcacactttg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844532 16 - 202140232 tttacagcacacttca
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27544008 16 -  28733288 tttacagcacacttca
i nomLeu3.chr24                C 0 C 0
e calJac3.chr7                 120508058 17 - 155834243 I
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=422953.000000
s hg38.chr14_KI270722v1_random    136143 539 +    194050  
s panTro4.chr3                 125210264 550 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159844548 551 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27544024 548 -  28733288  
i nomLeu3.chr24                C 0 C 0
s calJac3.chr7                 120508075 536 - 155834243  
i calJac3.chr7                 I 17 N 0
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=64368.000000
s hg38.chr14_KI270722v1_random    136682 129 +    194050 acacttttccatcatgtttactgtcttccatagagttccagcacactgagacaattccaatagtaacatcagaaatcactgatcacagatcatcatagcggatgtgataactaaaatgtttgaaagatt
s panTro4.chr3                 125210814 126 - 202329955 acatttttccatcgcgtttgctatcttccatagagttccagcatgctgagacaattccaatagtaacatcagaaatcactgatcacag---atcataacagatgtgataactaaaatctttgaaagatt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159845099 129 - 202140232 acatttttccatcatgtttgctgtcttccatagagttccagcaccctgagacaattccaatagtaacatcagaaatcactgatcacggatcatcataacagatttgataactaaaatctttgaaagatt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27544572 129 -  28733288 acatttttccatcatgtttgctgtcttccatagagttccagcaccctgagacaattccaatagtgacatcagaaatcactgatcacggatcatcataacagatgtgataactaaaatctttgaaagatt
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19687739 1381 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122249453 1379 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=4365.000000
s hg38.chr14_KI270722v1_random    136811 3 +    194050 gtg
s panTro4.chr3                 125210940 3 - 202329955 gtg
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19689120 3 -  19803153 GTG
i panPan1.JH650580             I 1381 I 195
s gorGor3.chr3                 122250832 3 - 199944510 gtg
i gorGor3.chr3                 I 1379 I 195
s ponAbe2.chr3                 159845228 3 - 202140232 gtg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27544701 3 -  28733288 gtg
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=100627.000000
s hg38.chr14_KI270722v1_random    136814 198 +    194050 gggattgccaaaagatgtgacacagatgtgaagtgagcacacggtgttggaaaaatggtgctggtcagacttgctgagcactttgtggccacaaatctttaatttgttaaaaaggtgatgttgccaagcaaaataaagtgaagctcgataaagtgaggtgtgcctCTAttttgatgggctttaaccacttgtcttttc
s panTro4.chr3                 125210943 195 - 202329955 gggattgccaaaagatgtgacagagatgtgaagtgagcccatggtgttggaaaaatggtgctggtcaggcttgctgagcacttcgtggccacaaatctttaatttgttaaaaaggtgatgttgccaagcaaaataaagtgaagctc---aaagtgagatgtgcctCTGttttgatgggctctaacaatttgtcttttc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159845231 198 - 202140232 gggattgccaaaagatgtgacacagatgtgaagtgagcacacagtgttggaaaaatggtgctggtcagacttgctcagcacttcgtggccacaaatctttaacttgttaaaaaggtgatgttgccaagcaaaataaagtgaagctcgataaagtgaggtgtgcctCTAttttgatgggctctaacaatttgtcttttc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27544704 196 -  28733288 gggattgccaaaagatatgac--agatgtgaagtgagcacaccgtgttggaaaaatggtgctggtcagacttgctcagcacttcatggccacaaatctttaatttgttaaaaaggtggtgttgccaagcaaaataaagtgaagctcgataaagtgaggtgtgcctCTAttttgatgggctctaacaatttgtcttttc
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19689123 195 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122250835 195 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=755.000000
s hg38.chr14_KI270722v1_random    137012 1 +    194050 g
s panTro4.chr3                 125211138 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19689318 1 -  19803153 A
i panPan1.JH650580             I 195 I 278
s gorGor3.chr3                 122251030 1 - 199944510 a
i gorGor3.chr3                 I 195 I 167
s ponAbe2.chr3                 159845429 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27544900 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=85808.000000
s hg38.chr14_KI270722v1_random    137013 167 +    194050 ttggtgcatttagacca-tgacattcaaagtgattatacagttgggttaattttgccatatcattttccattcactcctattgttctttgttcttgctttgtcctccactctttttctgccttttatggagttgatgattttatatgatttttatttcctctcattac
s panTro4.chr3                 125211139 168 - 202329955 ttggtgcatttagaccattgacattcaaagtgattatacagttggattaattttgccatatcattttcaattcactcctattgttctttgttcttgctttgtcctccactctttttctgccttttatggagttgatgattttatacgatttttgtttcctctcgttGC
i panTro4.chr3                 C 0 I 9
s ponAbe2.chr3                 159845430 168 - 202140232 ttggtgcatttagaccattgacattcaaagtgattatacagttggattaattttgccatatcgttttccattcacttccattgttctttgttcttgctttgtcctccactctttttctgccttttatggaaatgatgattttatatgatttctgtttcctctcattGC
i ponAbe2.chr3                 C 0 I 2
s nomLeu3.chr24                 27544901 168 -  28733288 ttggtgcatttagaccattgacattcaaagtgattatacagttggattaattttgccatatcgttttccattcactcccattgttctttgttctttctttgtcctccactgtttttctgccttttatggagttgatgattttatataatttttgtttcctttcattgc
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19689319 278 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251031 167 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1820.000000
s hg38.chr14_KI270722v1_random    137180 2 +    194050 tt
s panTro4.chr3                 125211316 2 - 202329955 tt
i panTro4.chr3                 I 9 C 0
s gorGor3.chr3                 122251198 2 - 199944510 tt
i gorGor3.chr3                 I 167 I 7333
s ponAbe2.chr3                 159845600 2 - 202140232 tt
i ponAbe2.chr3                 I 2 C 0
s nomLeu3.chr24                 27545069 2 -  28733288 tt
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19689319 278 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=49526.000000
s hg38.chr14_KI270722v1_random    137182 110 +    194050 tttttttgaaattgaaacagcattcacccaggctggagtgcagtc--gtgtggtcatggctccctgcagactcaacctcgtgggtttaagtgatctttccacctcagcctcc
s panTro4.chr3                 125211318 107 - 202329955 ttttttttttattgagacag---tcacccaggctggagtgcagtg--gtgtgatcatggctctctgcagcctcaacctcgtgggttcaagtgatccttccacctcagtctcc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159845602 109 - 202140232 ttttttttttattgagacag---tcacccaagctggagtgcagtggtgtgtgatcatggctccctgtagcctcagcctcatgggttcaagtgatccttccacctcagtctcc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27545071 106 -  28733288 -tttttttttattgagacag---tcatcgaggctggagtgcagtg--gtgtgatcatggctccctgcagcctcaacctcttgggttcaagtgatccttccacctcagtctcc
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19689319 278 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=34705.000000
s hg38.chr14_KI270722v1_random    137292 48 +    194050 caactagctaggactacaa------------------------------------------------gtatgcAATTAACTAGGATTACAGGTATG
s panTro4.chr3                 125211425 96 - 202329955 caattagctaggactacaagtatgcAATTAGCTAGGACTACAAGTATGCAATTAGCTAGGACTACAGGTATGCAATTAGCTAGGACTACAGGTATG
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19689597 48 -  19803153 caattagctaggactacaa------------------------------------------------gtatgcaattagctaggactacaagtatg
i panPan1.JH650580             I 278 I 421
s ponAbe2.chr3                 159845711 48 - 202140232 caattagctaggactacaa------------------------------------------------gtatgcAATTAGCTAGGACCACAAGTGTG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27545177 48 -  28733288 caattagctaggactacaa------------------------------------------------gtatgcAATTAGCTAGGACTACAAGTATG
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=25131.000000
s hg38.chr14_KI270722v1_random    137340 50 +    194050 CAATTAACTAGGACTACAAATATGCAATTAACTAGGACTACAAGTATGCA
s panTro4.chr3                 125211521 50 - 202329955 CAATTAGCTAGGACTACAGGTATGCAATTAGCTAGGACTACAAGTATGCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159845759 50 - 202140232 CAATTAGCTAGGACTACAAGTATGCAGTtagctaggactacatgtatgca
i ponAbe2.chr3                 C 0 I 1295
s nomLeu3.chr24                 27545225 50 -  28733288 CAATTAGCTAGGAATACAAGTATGCAATTAGCTAGGACTACAAGTATGCA
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19689645 421 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=14014.000000
s hg38.chr14_KI270722v1_random    137390 73 +    194050 ATTCACTAGGACCTCAAGTATGCAATTAGGTAGGACTACAAGTAAGTCATTAGCTAAGACTACAAGTATGCAA
s panTro4.chr3                 125211571 73 - 202329955 ATTAGCTAGGACTACAGGTATGCAATTAGCTAGGACTACAAGTATGCAATTAGCTAGGACTACAAGTATGCAA
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27545275 73 -  28733288 ATTAGCTGTGACTAGAAGTATGCAATTAGCTGTGACTAGAAGTATGCAATTAGCTGTGACTAGAAGTATGCAA
i nomLeu3.chr24                C 0 I 308
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19689645 421 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=182999.000000
s hg38.chr14_KI270722v1_random    137463 747 +    194050  
s panTro4.chr3                 125211644 767 - 202329955  
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27545656 738 -  28733288  
i nomLeu3.chr24                I 308 M 719
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19689645 421 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1179.000000
s hg38.chr14_KI270722v1_random    138210 27 +    194050 ttaggagaattaagaataaaaagtaag
s panTro4.chr3                 125212411 23 - 202329955 ttaggtcaattaagaataaa----aag
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19689645 421 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=300.000000
s hg38.chr14_KI270722v1_random    138237 1 +    194050 c
s panTro4.chr3                 125212434 1 - 202329955 c
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19690066 1 -  19803153 C
i panPan1.JH650580             I 421 I 278
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=21943.000000
s hg38.chr14_KI270722v1_random    138238 276 +    194050 agccggatacggtggcttatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacaaggtcagaagcctgagaccatcctagctaacatggtgaaatcctgtgtttactaaaaacacgaaaacaaaattagccaggc---gtggtgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgagcctagaaggcagagcttgcagtgagccaagatcacactactgcacttcagcctgggtgacagaatgagactc
s panTro4.chr3                 125212435 279 - 202329955 agccaggtatggtggcttatgcctgtaatcccaggactttgggaagccaaggtgggcagatcatgaggtcaggagattgagaccatcctagctaacatggtgaaatcccatctctactaaaaatacaaaaacaaaattagccgggtgtggtggtgggtgcctgttgtcccagctactcgggaggctgaggcaggagaatggcatgaacctggaaggcagagcttgccgtgagctgagatcacgctactgcactccagcctgggtgacagagtgagactc
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19690067 278 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=573.000000
s hg38.chr14_KI270722v1_random    138514 2 +    194050 ca
s panTro4.chr3                 125212714 2 - 202329955 ca
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19690345 2 -  19803153 ca
i panPan1.JH650580             I 278 I 77
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=3673.000000
s hg38.chr14_KI270722v1_random    138516 63 +    194050 tct------aaaaaaaaaaagggattttacaaccacttattccttctctaatgttatttttaaaatgta
s panTro4.chr3                 125212716 69 - 202329955 tctcacacacacacaaaaaaaccattttaccaccacttattccttctctaatgttctttttaaaatgta
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19690347 77 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=-665.000000
s hg38.chr14_KI270722v1_random    138579 6 +    194050 aattca---
s panTro4.chr3                 125212785 6 - 202329955 gattca---
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19690424 4 -  19803153 -----agcg
i panPan1.JH650580             I 77 I 3089
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=13151.000000
s hg38.chr14_KI270722v1_random    138585 155 +    194050 gg-cgggtgtagtggctcacacctgtaatcccagcactttgggaggtcgagatgtgtggatcacgaggttaggagttcaagaccagcctggcagagatggtgaaacactgtctccaataaaaatacaaaaaaattagccaggcgtggtggagggct
s panTro4.chr3                 125212791 156 - 202329955 ggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccaagatgggtggatcatgaggttaggagttcaagaccagcctggcaaagatggtgaaacactgtctctaataaaaatacaaaaaaattagctaggcgtggtggagggct
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19690428 3089 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27546394 719 -  28733288 M

a score=93866.000000
s hg38.chr14_KI270722v1_random    138740 400 +    194050 cctgtaatcccagctacttggggggctgaggcagagacttgcttgaacctgggaggctgaggttgcagtgagccgagattgtgccactgcactccagcctgggcaacagagcgagactcagtctcaaaataaataaataaaaataaatgaaatgtagattcagttttcagatgtgtatctttttttt-gtctagataatgtttaacatattcttacataacacatttgctggtaacaagtttcctcaacttttgtttgtccaaggaatgctttatttctcatttacttttgaaagaagatctcacagggcactgaaatctaatttga--------ttttttttctctcagcatgcttaatatttcattccactctc--tttactttcatggttctgagatgttgaatgtaa
s panTro4.chr3                 125212947 411 - 202329955 cctgtaatcccagctacttgggaggctgaggcagagaattgcttgaacctgggaggcagaggttgcagtgagccaagaatgtgccactgtactccagcctgtgcaacagagagagactctgtctcaaaataaataaataaaaataaataaaatgtagattcagttttcagatgtgtatcttttttttcctctagataatgtttaatattttctcacttgacacatctgctggtaacaagtttcctcaacttttgtttgtccagggaatgttttatttctcgtttacttttgaaagaagatctctcagggcactgaaatcttagttgatgtttttttttttttcctctcagcatgtttaatatgtcattccactctctttttactttcatggttctgagatgttgaatgtaa
i panTro4.chr3                 C 0 I 6
s nomLeu3.chr24                 27547113 397 -  28733288 cctgtaatcccagctacttgggaggctgaggcagagaattgcttgaacttgggaggcaggggttgcagtgagccgagattgtgccactgcactccagcttgggcaacagagtgagact--gtctca----aaataaataaaaataaataaaatgtagattcagttttcagatgtatatctttttttt-ctctagataatgtttaacattttctcacatgacacatctgctggcagcaagtttcctcaacttttgtttgtccaaggaatgt----tttctcatttacttttgaaagaagatctcacagggcactgaaatctaagttgatgttttt-ttttttttctctcagcttgtttaatatttcattccactctt--tttacttttgtggttctgaaatgttgaatgtaa
i nomLeu3.chr24                M 719 C 0
e ponAbe2.chr3                 159845809 1295 - 202140232 I
e panPan1.JH650580              19690428 3089 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1233784.000000
s hg38.chr14_KI270722v1_random    139140 2557 +    194050  
s panTro4.chr3                 125213364 2509 - 202329955  
i panTro4.chr3                 I 6 C 0
s ponAbe2.chr3                 159847104 2511 - 202140232  
i ponAbe2.chr3                 I 1295 C 0
s nomLeu3.chr24                 27547510 2512 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19690428 3089 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557    0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2710.000000
s hg38.chr14_KI270722v1_random    141697 6 +    194050 attctg
s panTro4.chr3                 125215873 6 - 202329955 cttctg
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19693517 6 -  19803153 CTCTTG
i panPan1.JH650580             I 3089 I 27
s ponAbe2.chr3                 159849615 6 - 202140232 cttctg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550022 3 -  28733288 ---ctg
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=10029.000000
s hg38.chr14_KI270722v1_random    141703 18 +    194050 cctcagcctcccaagtag
s panTro4.chr3                 125215879 18 - 202329955 cttcagcctcccaagtag
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159849621 18 - 202140232 cctcagcctcccaagtag
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550025 18 -  28733288 cctcagcctcccaagtag
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693523 27 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1115.000000
s hg38.chr14_KI270722v1_random    141721 2 +    194050 tt
s panTro4.chr3                 125215897 2 - 202329955 ct
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19693550 2 -  19803153 TT
i panPan1.JH650580             I 27 I 92
s ponAbe2.chr3                 159849639 2 - 202140232 ct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550043 2 -  28733288 ct
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=38739.000000
s hg38.chr14_KI270722v1_random    141723 85 +    194050 ggtactactggcaaacaccaccaaacttcgataatttttgtatttttagtagaggttcggttttgccatgttggtcaggttggtc
s panTro4.chr3                 125215899 85 - 202329955 ggtactactggcacacaccaccacacttcgctaatatttgtatttttagtagagatggagttttgccatgtgggccaggttggtc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159849641 85 - 202140232 ggtactactggcacatgctatcacactttgctaatttttgtatttttagtaaagatggggttttgccacattggccaggttggtc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550045 85 -  28733288 ggtactactggcacatgccaccacactttgctaatttttgtatttttagtagagatggggttttgccttgttggccaggttggtc
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693552 92 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1010.000000
s hg38.chr14_KI270722v1_random    141808 2 +    194050 tc
s panTro4.chr3                 125215984 2 - 202329955 tg
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19693644 2 -  19803153 TC
i panPan1.JH650580             I 92 I 5
s ponAbe2.chr3                 159849726 2 - 202140232 tc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550130 2 -  28733288 tc
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1638.000000
s hg38.chr14_KI270722v1_random    141810 3 +    194050 aaa
s panTro4.chr3                 125215986 3 - 202329955 aaa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159849728 3 - 202140232 aaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550132 3 -  28733288 aaa
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693646 5 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1000.000000
s hg38.chr14_KI270722v1_random    141813 1 +    194050 c
s panTro4.chr3                 125215989 1 - 202329955 c
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19693651 1 -  19803153 c
i panPan1.JH650580             I 5 I 2563
s ponAbe2.chr3                 159849731 1 - 202140232 c
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550135 1 -  28733288 c
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=354327.000000
s hg38.chr14_KI270722v1_random    141814 696 +    194050  
s panTro4.chr3                 125215990 696 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159849732 694 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550136 689 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1820.000000
s hg38.chr14_KI270722v1_random    142510 2 +    194050 tt
s panTro4.chr3                 125216686 2 - 202329955 tt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159850426 2 - 202140232 tt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550825 2 -  28733288 TT
i nomLeu3.chr24                C 0 C 0
s tarSyr2.KE941469v1              444032 2 -    583778 TT
i tarSyr2.KE941469v1           N 0 N 0
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1146.000000
s hg38.chr14_KI270722v1_random    142512 2 +    194050 tc
s panTro4.chr3                 125216688 2 - 202329955 tc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159850428 2 - 202140232 tc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550827 2 -  28733288 TC
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=422.000000
s hg38.chr14_KI270722v1_random        142514 1 +    194050 a
s panTro4.chr3                     125216690 1 - 202329955 a
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159850430 1 - 202140232 a
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27550829 1 -  28733288 A
i nomLeu3.chr24                    C 0 C 0
s tupBel1.scaffold_138131.1-284229    235645 1 +    284229 G
i tupBel1.scaffold_138131.1-284229 N 0 N 0
e panPan1.JH650580                  19693652 2563 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122251200 7333 - 199944510 I
e papAnu2.chr9                       3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random         25630 41825 +     87690 I
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=603772.000000
s hg38.chr14_KI270722v1_random    142515 1201 +    194050  
s panTro4.chr3                 125216691 1218 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159850431 1219 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27550830 1209 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557    0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=37670.000000
s hg38.chr14_KI270722v1_random    143716 145 +    194050 tgtttgtctatgttatgtaaaaatacagattcactgagccaaaGACATGGATGACTGTATCAGTCTGTTCtcacccctctgcccacctgacacacatgcatatctgattgttcccctccctgtttgtctatgttatgtataaacg
s panTro4.chr3                 125217909 145 - 202329955 tctttgtctatgctatgtataaatgcagattcactgagccaaaGGCACGGATGACTGTATcagtctgttctcacccctctgcccacctgacacaaatgcatatctgattgttcccctccctctttgtctatgttatgtataaatg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159851650 145 - 202140232 tgtttgtctatgttatgtacaaatgcagattcactgagccaaaGGCATGGATGACTGTATCAGTCTGTTCtcacccctctgcccacctgacacaaatgcttatctgattgttcccctccctgtttgtctatgttatgtataaatg
i ponAbe2.chr3                 C 0 C 0
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27552039   0 -  28733288 C

a score=8234.000000
s hg38.chr14_KI270722v1_random    143861 96 +    194050 cagattcactgagccaaagacatggatgactgtatcagtctattctcacccctctgccctcctgacacaaatgtatatctgattgttccccctccc
s panTro4.chr3                 125218054 96 - 202329955 cagattcactgagccaaaggcatggatgactgtAGcagtctgttctcactcctctgcccacctgacacaaatgcatatctgattgttccccctccc
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159851795  0 - 202140232 C
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27552039  0 -  28733288 C

a score=7025.000000
s hg38.chr14_KI270722v1_random    143957 26 +    194050 tgtttgtctatgttatgtataaatgc
s panTro4.chr3                 125218150 26 - 202329955 tgtttgtctatgttatgtataaatgc
i panTro4.chr3                 C 0 I 120
s nomLeu3.chr24                 27552039 26 -  28733288 tatttgtctatgttatgtataaatgc
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159851795  0 - 202140232 C
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=194391.000000
s hg38.chr14_KI270722v1_random    143983 377 +    194050 agattcactgagacaaaggcatgaatgactgtatcagtctgttctcatactgctctgaagaaatactcaagactgggtcatttataaaggaaagaggtttaattgactcacagctctgcatggctggggaggcctcaagaaacttacaataatggcagagagcacctcttcacaggggggcaggagagacaatgagtgcaagcac-------gggaaataccagacacttacaaaaccatcagatctcatgtgattcattatcatgagaacagcaaagaggaaactgccctgatgatccaattacttccacctggtcccacccttgacacatgaggattattacaatttatggtgagaattgtgtggggacacagagccaaacc
s panTro4.chr3                 125218296 384 - 202329955 agattcactgagacaaaggcatgaatgactgtatcagtctgttctcatactgctctgaagaaatactcaagactgggtcatttataaaggaaagaggtttaattgactcacagctctgcatggctggggaggcctcaggaaacttacaataatggcagagagcacctcttcacagggtgacaggagagacaatgagtgcaagcagacaatgagtgaaatgccagacatttataaaaccatcagatctcatgtgactcattatcatgagaacagcatagaggaaactgcccccatgatccaattacttccacctggtcccacccttgacacatggggattattgcaatttatggtgagatttgggtggggacacagagccaaacc
i panTro4.chr3                 I 120 C 0
s ponAbe2.chr3                 159851795 377 - 202140232 agattcacggagccaaaggcatggatgactgtatcagtctgttctcatactgctctgaagaaatactcaagactgggtcatttataaaggaaagaggtttaattgactcacagctctgcacggctggggaggcctcaggaaacttacaataatggcagagagcacctcttcacagggtggcaggagaggcaatgagtgcaagcag-------gggaaatgccagacacttataaaactatcagatctcatgtgactcattatcatgagaacagcctagaggaaactgcccccatgatccaattacttcctcctggtcccacccttgacaaatggggattattacaatttatggtgagatctggatggggacacagagccaaact
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552065 376 -  28733288 agattcactgagccaaaggcatggatgactgtgtcagtctgttctcatactgctctgaagaaatactcaagactgggtcattt-taaaggaaagaggtttaattgactcacagctctgcatggctggggaggcctcaggaaacttacaataatggcagagagcacctcttcacagggtggcaggagagacaatgagtgcaagcag-------gggaaatgccagacacttataaaaccatcagttatcatgtgactcattatcatgagaacagcatagaggaaactgcccccatgatccaattacttccacctggtcccaccctcgacacatggggattattacaatttatggtgagatgtcggtggggacacagagccaaacc
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19693652 2563 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=422.000000
s hg38.chr14_KI270722v1_random    144360 1 +    194050 a
s panTro4.chr3                 125218680 1 - 202329955 a
i panTro4.chr3                 C 0 I 1
s panPan1.JH650580              19696215 1 -  19803153 a
i panPan1.JH650580             I 2563 I 275
s ponAbe2.chr3                 159852172 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552441 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=144993.000000
s hg38.chr14_KI270722v1_random    144361 276 +    194050 tatcaatgaatgttttccccctaccccaatcttacatgaaaactgtatttctcaatatttcaccctttcccctttaaatttggagccctcataatcatttttgaagaaaggcatagacctgtctcctgggtgtgcatccttaacgttggcaaataaacctcttaaaatgatcgagatttgtctgggtcgtgtttcctgattgacCGAAGTGTTCCAGAGATGATATAAAGTAcagtcatgcatggcttaatgacatgtgtatgttctgagacatgc
s panTro4.chr3                 125218682 276 - 202329955 tatcaatgaatgttttccccttaccccagtcttacatgaaaactgtatttctcaatatttcaccctttcccctttaaatttggaaccctcataatcatttttgaagaaaagcatagacctgtctcctgggtgtgcatccttaacgttggcaaataaacctcctaaaatgattgagatttgtcttggtcatttttcttgattgacCAAAGTGTTCCAGAGATGATATAAAGTAcagtcatgcatggcttaatgacatgtgtatgctctgagacatgc
i panTro4.chr3                 I 1 C 0
s ponAbe2.chr3                 159852173 276 - 202140232 tatcaatgaatgttttccccctacctcagtcttacatgaaaactgtatttctcaatatttcaccctttcccctttaaatttggagccctcaaaatcatttttgaagaaaggcatagacctgtctcctgggtgtgtgtccttaacgttggcaaataaacctcctaaaatgattgagatttgtcttggtcatttttcttgattgacCAAAGTGTTCCAGAGATGATATAAAGTAcagtcatgcatggcttaatgacatgtgtatgttctgagacatgc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552442 275 -  28733288 catcaatgaatgttttccccctaccccagtcttacatgaaaactgtatttctcaatatttcaccctttcccctttaaatttggagccctcaaaatcatttttgaagaaaggcatag-cctgtctcctgggtgtgcgtccttaacgttggcaaataaacctcctaaaatgattgagatttgtctctgtcatttttctttattgacCAAAGTGTTCCAGAGATGATATAAAGTAcagtcatgcatggcttaatgacatgtatacgttctgagacatgc
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19696216 275 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122251200 7333 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1365.000000
s hg38.chr14_KI270722v1_random    144637 1 +    194050 a
s panTro4.chr3                 125218958 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19696491 1 -  19803153 A
i panPan1.JH650580             I 275 I 267
s gorGor3.chr3                 122258533 1 - 199944510 a
i gorGor3.chr3                 I 7333 I 266
s ponAbe2.chr3                 159852449 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552717 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=138718.000000
s hg38.chr14_KI270722v1_random    144638 268 +    194050 ttactaagcaatatttttgttttgtgaacatcataaagtgtacttacataaccctagatggtatatatgtttatattttttcatatgagaaaccatatgttctagcaccgtcattgaatatcagtcactttccctacttgatctgcagtgctagtatcaagtcccacatatcaggttttatcgggggaaccagcccccaatatttcaacataggttctttctattttccctaagtgttggctggtctgagaaataaggggtacaaaga
s panTro4.chr3                 125218959 267 - 202329955 ttactaagcaatgtttttgttttgtgaacatcataaagtgtagttacataaccctagatggtgtatatgtttatgttttttcataggagaaaccatatgttctagcaccaacattgaatatcagtcactttccctacttgatctgcagtgctagtatcaagtcccacatatcaggttttactgggggaaccagcccccaatatttcaacgtaggttctttctattt-ccctaagtgttggctggtctgagaaataaagagtacagaga
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159852450 268 - 202140232 ttactaagcaatatttttgttttgtgagcatcataaagtgtacttacataaacctagatggtatatatgtttatattttttcatatgagaaaccatatgttctaacaccatcattgaatatcagtcactttccctacttgatctgcagtgctagtatcaagtcccacatatcaggttttattgggggaaccaacccccaatatttcaatgtaggttctttctattttccctaagtgttggctggtctgaggaataaagagtacaaaga
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552718 268 -  28733288 ttactaagcaacatttttgtgttgtgaacatcataaagtgtacttacataaccctaggtggcatatatgtttatattttttcatatgagaaaccatatgttctagcaccatcattgaatatcggtcactttccctacttgatctgcagtgctagtatcaagtcccacgtatcaggttttattgggggaaccagcccccaatatttcaatgtaggttctttctattttccctaagtgttggctggtctgagaaataaagagtacaagga
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19696492 267 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122258534 266 - 199944510 I
e papAnu2.chr9                   3420557   0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=4092.000000
s hg38.chr14_KI270722v1_random    144906 4 +    194050 aaga
s panTro4.chr3                 125219226 4 - 202329955 gaga
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19696759 4 -  19803153 gaga
i panPan1.JH650580             I 267 I 2676
s gorGor3.chr3                 122258800 4 - 199944510 gaga
i gorGor3.chr3                 I 266 I 2667
s ponAbe2.chr3                 159852718 4 - 202140232 caga
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552986 4 -  28733288 gaga
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.chr9                   3420557 0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=528765.000000
s hg38.chr14_KI270722v1_random    144910 1083 +    194050  
s panTro4.chr3                 125219230 1142 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159852722 1232 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27552990 1218 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19696763 2676 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122258804 2667 - 199944510 I
e papAnu2.chr9                   3420557    0 - 125196307 I
e macFas5.chr5_KE145639_random     25630 41825 +     87690 I
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=21819.000000
s hg38.chr14_KI270722v1_random       145993 36 +    194050 gTACTTTGAAAATGAAAGGTGCATGCAT--TTTTGTCA
s panTro4.chr3                    125220372 36 - 202329955 gTACTTTGAAAATGAAAGGTGCATACCT--TTTTGTTA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159853954 36 - 202140232 gTACTTTGAAAATGAAAGGTGCATACAT--TTTTGTTT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27554208 36 -  28733288 gTACTTTGAAAATGAAAGGCGCATACAT--TTTTGTTA
i nomLeu3.chr24                   C 0 C 0
s tupBel1.scaffold_103362.1-12771     12402 37 -     12771 Gtaatttaaaaataaaata-acataaattattttGTCA
i tupBel1.scaffold_103362.1-12771 N 0 C 0
e panPan1.JH650580                 19696763 2676 -  19803153 I
e otoGar3.GL873804                   997192 8116 -   1077187 I
e gorGor3.chr3                    122258804 2667 - 199944510 I
e papAnu2.chr9                      3420557  0 - 125196307 I
e macFas5.chr5_KE145639_random        25630 41825 +     87690 I
e rheMac3.chr1                    225552600 48863 - 229590362 T

a score=81728.000000
s hg38.chr14_KI270722v1_random       146029 63 +    194050 TTAAAATTAGGTCAAATATTTAAATGCAGAATCACTGCATAATCAGTTCCTTCAAGACTGCGT
s panTro4.chr3                    125220408 63 - 202329955 TTAAAATTAGGTCAAATATTTAAATGCAGAATCACTGCATAATCAGTTCCTTCAAGACTGCAT
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159853990 63 - 202140232 TTAAAATTAGGTCAAATATTTAAATGCAGAATCACAGCATAATCAGTTCCTTCAAGACTGCAT
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27554244 63 -  28733288 TTAAAATTAGGTCAAATATTTAAATGCAGAATCACTGCATAATCAGTTCCTTCAAGACTGCGT
i nomLeu3.chr24                   C 0 C 0
s macFas5.chr5_KE145639_random        67455 63 +     87690 TTGGAGTTAGGTCAGATATTTACATGCAGACTCACTCCATAATCAGTTCCTTCAGTGTTGTGT
i macFas5.chr5_KE145639_random    I 41825 C 0
s papAnu2.JH684932                   223952 63 -    231459 ttggagTTAGGTCAGATATTTACATGCAGACTTACTCCCTAATCAGTTCCTTCAGTGTTGTGT
i papAnu2.JH684932                I 33287 C 0
s tupBel1.scaffold_103362.1-12771     12439 60 -     12771 TTTGCATTAGATCAGGT-TTTAAATGAAGAATTATTCTATAGTCAGTTCTTTCAGCAGTGG--
i tupBel1.scaffold_103362.1-12771 C 0 C 0
e panPan1.JH650580                 19696763 2676 -  19803153 I
e otoGar3.GL873804                   997192 8116 -   1077187 I
e gorGor3.chr3                    122258804 2667 - 199944510 I
e rheMac3.chr1                    225552600 48863 - 229590362 T

a score=1964.000000
s hg38.chr14_KI270722v1_random       146092 3 +    194050 CTA
s panTro4.chr3                    125220471 3 - 202329955 CTA
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159854053 3 - 202140232 CTA
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27554307 3 -  28733288 CTA
i nomLeu3.chr24                   C 0 C 0
s tupBel1.scaffold_103362.1-12771     12499 3 -     12771 CTT
i tupBel1.scaffold_103362.1-12771 C 0 C 0
e panPan1.JH650580                 19696763 2676 -  19803153 I
e otoGar3.GL873804                   997192 8116 -   1077187 I
e gorGor3.chr3                    122258804 2667 - 199944510 I
e papAnu2.JH684932                   224015 0 -    231459 C
e macFas5.chr5_KE145639_random        67518 0 +     87690 C
e rheMac3.chr1                    225552600 48863 - 229590362 T

a score=235626.000000
s hg38.chr14_KI270722v1_random       146095 187 +    194050 TCTCTCTCATCAAGGCCCAGGATCTTTTATCTAGATACACTGCAGTGTGTCATTCCATTAA--CATGGTGTG-TCTTCTTTGTGTCCTTGGGACTGGACTTCAGCTACACCTCATAGTTGTGAGATGGTGTGGTTCACATGGAAGTGCTAAACAACTTTGTTTTTTCAGTGAAGTGCAACCTCGTAATAC
s panTro4.chr3                    125220474 187 - 202329955 TCTCTCTCATCAAGGCCCAGAATCGTTTATCTAGATACACTGCAGTATGTCATTCCATTAA--CATGGTGTG-TCTTCTTTGTGTCCTTGGGACTGGACTTCTGCTACACCTCATACTTGTGAGATGGTGTGGTTCACATGGAAGTGCTAAACAACTTTGGTTTTTCAGTGAAGTGCAACCTCATAATAC
i panTro4.chr3                    C 0 C 0
s ponAbe2.chr3                    159854056 187 - 202140232 TCTCTCTCATCAAGGCCCAGGAGCGTTTATCTAGATACACTGCAGTATGTCATTCCATTAA--CATGGTGTG-TCTTCTTTGTGTCCTTGGGACTGGACTTCTGCTACACCTCATAGTTGTGAGATGGTGTGGTTCTCATGGAAGTGCTAAACATCTTTGGTTTTTCAGTGAAGTGCAACCTCATAATAC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27554310 187 -  28733288 TCTCTCTCATCAAGGCCCAGGAGCATTTATCTAGATACACTGCAGCATGTCATTCCATTAA--CATGGTGTG-TCTTCTTTGTGTTCTTGGGACTGGATTTCTGCTACACCTCATAGTTGTGAGATGGTGTGGTTCTCATGGAAGTGCTAAACATCTTTGGTTTTTCAGTGAAGTGCAACCTCATAATAC
i nomLeu3.chr24                   C 0 C 0
s macFas5.chr5_KE145639_random        67518 186 +     87690 TCTCTCTCATCACAGCCCGGGATCATTCAGCTAGACATGGTGCTGTGTGCAGTTCCGTTAA--TATGGTATG-TGTTCTTCGTGTCCTTATGACTAGACTCCAGTGTTGCCTCAAAGTCACGAGAACACATGGTTCACAT-GAAATACTAAGCATCTTTGGTTTTTCAATGAAGTGCAACTTTCTAATGC
i macFas5.chr5_KE145639_random    C 0 T 42074
s papAnu2.JH684932                   224015 186 -    231459 TCTCTCTCATCACAGCCCGGGATCATTCAGCTAGACATGGTGCTGTGTGCAGTTCCGTTAA--TATGGTATG-TGTTCTTCGTGTCCTTATGACTAGACTCCAGTGTTGCCTCAAAGTCACGAGAACACATGGTTCACAT-GAAGTACTAAGCATCTTTGGTTTTTCAATGAAGTGCAACTTTCTAATGC
i papAnu2.JH684932                C 0 T 32782
s tupBel1.scaffold_103362.1-12771     12502 188 -     12771 TCTCTCTCATGATGGTTCAGGATCATTTA--TAGCCATGGTGCTGTGTGTAGTTCCATAAATCTGTGTTTTGTTTTTTTTTGTGCCTTTGTGACTGGAATCTGTCCTTGCCTTATAATCATAAAAACACGTGATTTACATGGAAAAGATAAACACTTTTTGTTTTTCTGTGAAGTGCCACTTCACATTAC
i tupBel1.scaffold_103362.1-12771 C 0 N 0
e panPan1.JH650580                 19696763 2676 -  19803153 I
e otoGar3.GL873804                   997192 8116 -   1077187 I
e gorGor3.chr3                    122258804 2667 - 199944510 I
e rheMac3.chr1                    225552600 48863 - 229590362 T

a score=221476.000000
s hg38.chr14_KI270722v1_random    146282 435 +    194050 TgtgcatcaccatgcctggctagtttttctattttttgtagagacagggtttcaccatgttgctcagtctggtcttgaactcatgagcccaagtgatccacctgcctcaacctcccaaagtgctggaattacaggcatgagccactgtacctgtccTAACAAACCATTTGAACTACAGGTGAAGCGAAGTCTCTCTCTCTGATATTTGGCGTTCTTTTTACAACTCCTAAAATATCTAAATGTGCC-TCCCTCTCAGGGCACACAGCCCAATCCTATTTTCTCCCATATGATAGGAAAGAAAGAATCACATAACAAA---------ATCTTCATTGTGAAGAGCACACGGTCAAAACATTTTTTAAAATCCTATTTTGAAGTCCAGTTATGCAAAGAATTAATAAATAATGACACAAATTGATGAAAGTGTAGCTATCTTACTGA
s panTro4.chr3                 125220661 441 - 202329955 cgtgcatcaccatgcctggctagtttttctattttttgtagagacagggtttcaccatgttgctcaggcttgtcgtgaactcatgagcccaagtgatccacctgcctcaacctcccaaagtgctggaattacaggcatgagccactgtgcctgtccTAACTAAATATTTGAACTACAGGTGAAGCAAAGTCTCTCTCTCTGATGTTTGGTCTTCTATTTACAACTCCTAAAATATCTAAATGTGCCCTCCCTCTCAGGGCACACAGCCCAATCCTATTTTCTCCCATATGACAGGAAAGAAAGAATCACATAACAAATGCCTAGTGATCTTCATTGTGAAGAGCACACGGTCAAAACTTTTTTTAAAATCCTATTTTGAAGTCCAGTTATGCAAAGAATTAATAAATAATGACACGAATTGATGAAAGAGTA----TCTTAATGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159854243 445 - 202140232 TgtgcatcaccatgcccggctagtttttctattttttgtagtgacagggtttcaccatgttgctcaggctggtcttgaactcatgagcccaagtgttccacctgcctcaacctcccaaagtgctggaattacaggcatgagccacttcgcctgtccTAACTAACCATTTGAACTACAAGTGAAGCAAAGTCTCTCTCTCTGATGTTTGGTCTTCTATTTACAAGTCCTAAAATATCTAAATGTGCCCTCCCTCTCAGGGCACACAGCCCAATCCTATTTTCTCCCATATGATAGGAAAGAAAGAATCACATAGCAAATGCCTAGTGATTTTCATTGCGAAGAGCACATGGTCAAAACTTTTTTAAAAATCCTATTTTGAAGTCCAGTTATGCAAAGAATTAATAAATAATGACACGAACTGATGAAAGAGTAGCTATCTTACTGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27554497 443 -  28733288 TgtgcaccaccatgcctggctagtttttctattttttgtagagacagggtttcaccatgttgctcaggctggtcttgaactcatgagcccaagtgatccacctgcgtcaacctcccaaaatgctggaattacaggcatgagccactgtgcctgtccTAACTAACCATTTGAACTACAAGTGAAGCAAAG--TCTCTCTCTGATGTTTGGTCTTCTATTTACAACTCCTAAAATATCTAAATATGCCCTCCCTCTCAGGGCACACAGCCCAATCCTATTTTCTCCCACATGATAGGAAAGAAAGAATCACATAACAAATGCCTAGTGATTTTCATTGTGAAGATCACACGGTCAAAACTTTTTTAAAAATCCTACTTTGAAGTCCATTTGTGCAAAGAATTAATAAATAATGACACGAATTGATGAAAGAGTAGCTATCTTACTGA
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19696763 2676 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122258804 2667 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1731.000000
s hg38.chr14_KI270722v1_random        146717 2 +    194050 -AA
s panTro4.chr3                     125221102 2 - 202329955 -GT
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159854688 2 - 202140232 -GT
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27554940 2 -  28733288 -GT
i nomLeu3.chr24                    C 0 C 0
s tupBel1.scaffold_114375.1-135853    135150 2 -    135853 AA-
i tupBel1.scaffold_114375.1-135853 N 0 I 519
e panPan1.JH650580                  19696763 2676 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122258804 2667 - 199944510 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=411078.000000
s hg38.chr14_KI270722v1_random        146719 800 +    194050  
s panTro4.chr3                     125221104 798 - 202329955  
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159854690 797 - 202140232  
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27554942 797 -  28733288  
i nomLeu3.chr24                    C 0 C 0
e tupBel1.scaffold_114375.1-135853    135152 519 -    135853 I
e panPan1.JH650580                  19696763 2676 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122258804 2667 - 199944510 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=910.000000
s hg38.chr14_KI270722v1_random        147519 1 +    194050 T
s panTro4.chr3                     125221902 1 - 202329955 T
i panTro4.chr3                     C 0 C 0
s gorGor3.chr3                     122261471 1 - 199944510 T
i gorGor3.chr3                     I 2667 I 2985
s ponAbe2.chr3                     159855487 1 - 202140232 T
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27555739 1 -  28733288 T
i nomLeu3.chr24                    C 0 C 0
e tupBel1.scaffold_114375.1-135853    135152 519 -    135853 I
e panPan1.JH650580                  19696763 2676 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=910.000000
s hg38.chr14_KI270722v1_random        147520 1 +    194050 T
s panTro4.chr3                     125221903 1 - 202329955 T
i panTro4.chr3                     C 0 C 0
s panPan1.JH650580                  19699439 1 -  19803153 T
i panPan1.JH650580                 I 2676 I 2980
s ponAbe2.chr3                     159855488 1 - 202140232 T
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27555740 1 -  28733288 T
i nomLeu3.chr24                    C 0 C 0
e tupBel1.scaffold_114375.1-135853    135152 519 -    135853 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122261472 2985 - 199944510 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=27883.000000
s hg38.chr14_KI270722v1_random        147521 52 +    194050 AGTCTGGAAGTGAACAAGATAACGGGAAGTAAGAGGAGTGCAGGCTGATGGA
s panTro4.chr3                     125221904 52 - 202329955 AGTGTGGAAGCGAACAAGATAACGGGAAGTGAGAGGAGTGCAGGCTGATGGA
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159855489 52 - 202140232 AGTCTGGAAGCGAACAAGATAACGGGAAGTGAGAGGAGTGCAGGCTGATGGA
i ponAbe2.chr3                     C 0 I 74
s nomLeu3.chr24                     27555741 52 -  28733288 AGTCTGGAAGTGAACAAGATAACGGGAAGCGAGAGGAGTGCAGGCTGATGGA
i nomLeu3.chr24                    C 0 I 145
e tupBel1.scaffold_114375.1-135853    135152 519 -    135853 I
e panPan1.JH650580                  19699440 2980 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122261472 2985 - 199944510 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=20785.000000
s hg38.chr14_KI270722v1_random        147573 39 +    194050 AACATGATGGAAAATGGAAATATTTCAGATGAGAGAGGG
s panTro4.chr3                     125221956 39 - 202329955 AACATGATGGAAAATGGAAATATTTCAGATGAGAGAGAG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159855615 39 - 202140232 AACATGATGGAAAATGGAAATATTTCAGGTGAGAGAGAG
i ponAbe2.chr3                     I 74 C 0
s nomLeu3.chr24                     27555938 39 -  28733288 AACATGATGGGAAATGGAAATATTTCAGGTGAGAGAGAG
i nomLeu3.chr24                    I 145 C 0
e tupBel1.scaffold_114375.1-135853    135152 519 -    135853 I
e panPan1.JH650580                  19699440 2980 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122261472 2985 - 199944510 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=8736.000000
s hg38.chr14_KI270722v1_random        147612 19 +    194050 TGAGGTTTTCACTGAGTAT
s panTro4.chr3                     125221995 19 - 202329955 TGAGGGTTTCACTGAGTCG
i panTro4.chr3                     C 0 C 0
s ponAbe2.chr3                     159855654 19 - 202140232 TGAGGGTTTCACTGAGTCG
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27555977 19 -  28733288 TGAGGGTTTCACTGAGTCG
i nomLeu3.chr24                    C 0 C 0
s tupBel1.scaffold_114375.1-135853    135671 19 -    135853 TGGGACCAGCAGTTAGCAT
i tupBel1.scaffold_114375.1-135853 I 519 N 0
e panPan1.JH650580                  19699440 2980 -  19803153 I
e otoGar3.GL873804                    997192 8116 -   1077187 I
e gorGor3.chr3                     122261472 2985 - 199944510 I
e papAnu2.JH684932                    224201 32782 -    231459 T
e macFas5.chr5_KE145639_random         67704 42074 +     87690 T
e rheMac3.chr1                     225552600 48863 - 229590362 T

a score=72359.000000
s hg38.chr14_KI270722v1_random    147631 150 +    194050 AAGAGTGCAGGCTGATGGAAACATG--------------------------------------------------------------------------ATGGAAAATGGAAATATTTCAGGTGAGAGAGAGTGAGGGTTTCACTGAGTCATAAAGTTGTGGAGAAGAAGCAGTGAGTAGAA---TACTTAAGAAGTAGAATTAATAAAACTTTGTGACAGAACAGG
s panTro4.chr3                 125222014 227 - 202329955 AGGAGTGCAGGCTGATGGAAACATGGAAAATGGAAATATTTCAGATGAGAGGGAAGGAGGGTTTCACTGAGTCGAGGAGTGCAGGCTGATGGGAACATGATGGAAAATGGAAATATTTCAGGTGAGAGAGAGTGAGGGTTTCACTGAGTCATAAAGTTGTGGAGAGGAAGCAGTGAGTAGAAGAATACTTAAGAAGTAGAATTAATAAAACTTTGTGCCAGAACAGG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159855673 153 - 202140232 AGGAGTGCAGGCTGATGGGAACATG--------------------------------------------------------------------------ATGGAAAATGGAAATATTTCAGGTGAGAGAGAGTGAGGGTTTTACTGAGTCATAAAGTTGTGGAGAGGAAGCAGTGAGTAGAAGAATACTTAAGAAGTAGAATTAACAAAACTTTGTGACAGAACAGG
i ponAbe2.chr3                 C 0 M 1220
s nomLeu3.chr24                 27555996 153 -  28733288 AGGAGTGCAGGCTGATGGGAACATG--------------------------------------------------------------------------ATGGGAAATGGAAATATTTCAGGCGAGAGAGAGTGAGGGTTTCACTGAGTCGTAAAGTTATGGAGAGGAAGCAGTGAGTAGAAGAATACTTAAGAAGTAGAATTAACAAAACTTTGTGACAGAACAGG
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19699440 2980 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122261472 2985 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=405274.000000
s hg38.chr14_KI270722v1_random    147781 1745 +    194050  
s panTro4.chr3                 125222241 1750 - 202329955  
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27556149 1695 -  28733288  
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159855826 1220 - 202140232 M
e panPan1.JH650580              19699440 2980 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122261472 2985 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=428084.000000
s hg38.chr14_KI270722v1_random    149526 895 +    194050  
s panTro4.chr3                 125223991 898 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159857046 901 - 202140232  
i ponAbe2.chr3                 M 1220 C 0
s nomLeu3.chr24                 27557844 868 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19699440 2980 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122261472 2985 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1365.000000
s hg38.chr14_KI270722v1_random    150421 1 +    194050 t
s panTro4.chr3                 125224889 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19702420 1 -  19803153 t
i panPan1.JH650580             I 2980 I 323
s gorGor3.chr3                 122264457 1 - 199944510 t
i gorGor3.chr3                 I 2985 I 218
s ponAbe2.chr3                 159857947 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27558712 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=74396.000000
s hg38.chr14_KI270722v1_random    150422 167 +    194050 gaagtgaaatcttgctctgtttccaggctggagtgcagtggcgcgatcttggctcactgcaacatccacctcctaggttcaagcgattcttcagcctcagccttccgagtagctgggacaataggtgcccatgaccacgcccgactaatttttttttcttttttttt
s panTro4.chr3                 125224890 162 - 202329955 gaagtggaatcttgctctgtctccaggctggagtgcagtggcgcgatcttggctcactgcgacctccacctcctcggttcaaatgattctctggcctcagcctcccgagtagctgggactacaggcgcccaccaccaagcccagctaattttttttt-----ttttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159857948 162 - 202140232 gaagtggaatcttgctctgtctccaggatggagtgcagtggcacgatcttggctcactgcaacctccacctcctgggttcaagcgattctccggcctcaacctcccaagtagctgggactacgggcgcccgccaccacgcccggctaattttatttt-----atttt
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27558713 157 -  28733288 gaagtggaatcttgctctgtctccaggctggagtgcagtggcatgatcttggctcactgcaacctccacctcctgggttcaagggattctccggcctcagcctcccaagtagctgggactacaggcgccggccaccacgcccagctaattttttttt----------
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19702421 323 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264458 218 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=18862.000000
s hg38.chr14_KI270722v1_random    150589 22 +    194050 ttgtatttttagtagagatggg
s panTro4.chr3                 125225052 22 - 202329955 ttgtatttttagtagagatggg
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122264676 22 - 199944510 ttgtatttttaggagagatggg
i gorGor3.chr3                 I 218 I 143
s ponAbe2.chr3                 159858111 20 - 202140232 --gtatttttagtagagatggg
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27558870 22 -  28733288 ttgtatttttagtagagatggg
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19702421 323 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=74117.000000
s hg38.chr14_KI270722v1_random    150611 143 +    194050 gtttcaccgtgttggccaggatggtctggatctcttgactttgtgatccacctgcctcagcctctccaagtgctgggattacaggtgtgagccaccgcacccggccaatatttactaatttagaagtcctaatttctcttatg
s panTro4.chr3                 125225074 143 - 202329955 gtttcaacgtgttggccaggatggtcttgatctcttgaccttgtgatccacctgcctcggcctccccaagtgctgggattacaggtgtgagccaccgcacccggccaatatttactaatttaaaagtcctaatttctcttatg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159858131 143 - 202140232 gtttcactgtgttgaacaggatggtcttgatctcttgaccttgtgatctgcctgccttggcctccccaagtgctgggattacaggtgtgagccaccgcacccggccaatatttactaatttagaagtcctaatttctcttatg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27558892 143 -  28733288 gtttcactgtgttggccaggatggtcttgatttctcgaccttgtgatccgcctgcctcggcctccccaagtgctgggattacaggtgtgagccactgcacccggcaaatatttactaatttagaagtcctaatttcttttatg
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19702421 323 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264698 143 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1365.000000
s hg38.chr14_KI270722v1_random    150754 1 +    194050 a
s panTro4.chr3                 125225217 1 - 202329955 a
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19702744 1 -  19803153 A
i panPan1.JH650580             I 323 I 1961
s gorGor3.chr3                 122264841 1 - 199944510 A
i gorGor3.chr3                 I 143 I 4365
s ponAbe2.chr3                 159858274 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27559035 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=120867.000000
s hg38.chr14_KI270722v1_random    150755 236 +    194050 taatcattaatagaaataatacatatgaataaaTTTGGGTGAGAGAGAAAGGTTTGGAAGTTGTCAATTATTTTTCCTTTTAACTTATTTAAAATTCAAGTGTCATGTCTACAAAATGGCTGCAAAACTCATAAATTAAAATAGAGACCT-ATTCCTCCACACTCCTTTAGTTTCATTTTTTCCTTCTATCAGAGAGTTTATCACTATTATTTTTAGTCTTGTCATCCCAACTGAAT
s panTro4.chr3                 125225218 237 - 202329955 taatcattaatagaaataatacatatgaataaaGTTGGGTGAGAGAGAAAGATTTGGAAGTCGTCAATTTTTTTTCCTTTTAACTTATTTAAAATTCAAGTGTCATGCCTACAAAGTGGCTGCAAAACTCGTAAATTAAAATAGAGACCTTATTCCTCCACACTCCTTTAGTTTCATTTTTTCTTTCTATCATAGGGTTTATCACTATTATTTTTAATCTTCTCATCCCAACTAAAT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159858275 237 - 202140232 taatcattaatagaaataatacacataaataaaGTTGGGTGAGAGAGAAAGGTTTGGAAGCTGTCAATTTTTTTTCCTTTTAACTTATTTAAAATTCAAGTGTCATGTCTACAAAGTGGCTGCAAAACTCATAAATTAAAATAGAGACTTTATTCCTCCACACTCCTTTAGTTTCTTTTTTTCCTTCTATCATAGGGTTTATCACTATTATTTTTAATCTTGTCATCCCAACTAAAT
i ponAbe2.chr3                 C 0 I 7152
s nomLeu3.chr24                 27559036 237 -  28733288 taatcgttaatagaaataatacacatgaataaaGTTGGGTGAGAGAGAAAGGTTTGGAAGTTGTCAGTTTTTTTTCCTTTTAACTTATTTAAAATTCAAGTGTCATGTCTACAAAGTGGCTGCAAAACTCATAAATTAAAATAGAGGCCTTATTCCTCCACACTCCTTTAGTTTCGTTTTTTCCTTCTGTCATAGGGTTTATCACTATTATTTTAAATCTTGTCATCCCAACTAAAT
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19702745 1961 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=15105.000000
s hg38.chr14_KI270722v1_random    150991 61 +    194050 TATGAAGTCCTGCAGAAAAAAAAGTTATGTGCTTTATTTTTGATTTATTTGTACTTAGCAC
s panTro4.chr3                 125225455 61 - 202329955 TGTGAAGTCCTGCAGAAAAAAAAGTTATTTGCTTTACTTTTGACTTATTTGAACTTAGCAC
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27559273 61 -  28733288 TATGAAGTCCTGCAGAAAAAAAAGTTATGTGCTTTATTTTTTACTTATTTGTACTTAGCAC
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159858512 7152 - 202140232 I
e panPan1.JH650580              19702745 1961 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=55607.000000
s hg38.chr14_KI270722v1_random    151052 114 +    194050 CATGAATTGCTTAGGGATTGTTCTTTAAAATAAAATTTAAATAACATCAggacaggcatgggggctcacacctgtaatcacagcactttgggagactgaggtgggcagattacc
s panTro4.chr3                 125225516 114 - 202329955 CATGAATTGCTTAGGGATTGTTCtttaaaataaaaattaaataaCATCAggccaggcgtgggggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagattacc
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159865664 114 - 202140232 CATGAATTGCTTTTTGATTGTTCtttaaaataaaaattaaataaCATCAggccatgcgtgggggctcactcctgtaatcccagcactttgggaggatgaggcgggcagattacc
i ponAbe2.chr3                 I 7152 C 0
s nomLeu3.chr24                 27559334 114 -  28733288 CATGAATTGCTTAGGGATTGTTCTTTAAAATAAAAATTAAATAACATCAggccaggcgtgggggctcacgcctgtaatcccagcactttgggaggctgagtgaggtggattacc
i nomLeu3.chr24                C 0 I 647
e panPan1.JH650580              19702745 1961 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=758471.000000
s hg38.chr14_KI270722v1_random    151166 1513 +    194050  
s panTro4.chr3                 125225630 1536 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159865778 1527 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27560095 1524 -  28733288  
i nomLeu3.chr24                I 647 C 0
e panPan1.JH650580              19702745 1961 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1820.000000
s hg38.chr14_KI270722v1_random    152679 2 +    194050 at
s panTro4.chr3                 125227166 2 - 202329955 at
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19704706 2 -  19803153 at
i panPan1.JH650580             I 1961 I 2945
s ponAbe2.chr3                 159867305 2 - 202140232 AT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27561619 2 -  28733288 AT
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=416356.000000
s hg38.chr14_KI270722v1_random    152681 856 +    194050  
s panTro4.chr3                 125227168 864 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159867307 849 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27561621 859 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=19201.000000
s hg38.chr14_KI270722v1_random    153537 214 +    194050 ttcccagggtggtctcaaactcctgggctcaaaggatcctcctgcctcagcttcccaatgtgctgtgattacaggtatgaaccaccatgcctggccTTAATATTATTTTCTATTTGTAAATGGAAAGCTTCAGAAAAGACCCTCAAACAGGACTATAAATGTTTTCACAATACTGTTTGGTACAGCCAGATATTGATAGTATGTATAATGTAAC
s panTro4.chr3                 125228032 214 - 202329955 ttcccaggttggtctcaaactcctgggctcaaaggatcctcctgcctcagcttcccaatgtgttgtgattacaggcatgaaccaccgtgcctggccTTAATATTCTTTTCTATTTGTAAATGGAAAGCTTCAGAAAAGACCCTCAAACAGGACTATAAATGTTTTCACAATACTGTTTGGTACAGCCAGATATTAATAGTATGTATAATATAAC
i panTro4.chr3                 C 0 C 0
e ponAbe2.chr3                 159868156   0 - 202140232 C
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T
e nomLeu3.chr24                 27562480   0 -  28733288 C

a score=269162.000000
s hg38.chr14_KI270722v1_random    153751 544 +    194050  
s panTro4.chr3                 125228246 543 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159868156 541 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27562480 548 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1799.000000
s hg38.chr14_KI270722v1_random    154295 6 +    194050 T-AGTAT
s panTro4.chr3                 125228789 7 - 202329955 TAAGTAT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159868697 6 - 202140232 T-GGTAT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27563028 6 -  28733288 T-AGTAT
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1              291198 6 -   1849528 t-ggcag
i rhiRox1.KN299240v1           N 0 I 1966
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=11236.000000
s hg38.chr14_KI270722v1_random    154301 27 +    194050 ACACGGTAGGAGCGCAGCCAAATGTCT
s panTro4.chr3                 125228796 27 - 202329955 AAACGGTAGGAGCCCAGCCGAATGTCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159868703 27 - 202140232 ACAAGGTAGGAGCCCAGACGTATGTCT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27563034 27 -  28733288 ACACGGTAGGAGCCCAGCCTTATGTCT
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=910.000000
s hg38.chr14_KI270722v1_random    154328 1 +    194050 T
s panTro4.chr3                 125228823 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159868730 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27563061 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
s tarSyr2.KE941469v1              127613 1 +    583778 t
i tarSyr2.KE941469v1           N 0 N 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=41811.000000
s hg38.chr14_KI270722v1_random    154329  97 +    194050 CCTCCAGCCCCACATCCAATGGCTGAAATGTGCACCTTCTTACCTAAGGTTGTGTATCCCCTTCTCTGCAGCTACAGCCCACTTGGCCTGGGT---------------------------------------------------------------------------------------------TCca
s panTro4.chr3                 125228824 190 - 202329955 CCTCCAGCCCCACATCCAATGGCTGGGATGTGCACCCTCTTACCTAAGGTTGTGTATCCCCTTCTCTGCAGCTAGAACCCACTTGGCCTGGGTTCCATTCCCCACCACAGAAAagccttctactactgactggactggagaatacatgcctcagttccgttgtcccctggctgtgtaactctgaggtcca
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159868731  97 - 202140232 CCTCCAGCCCCACATCCAATGGCTGGGATGTGTACCCTCTTACCTAAGGTTGTGTATCCCCTTCTCTGTAGCTAGAGCTCACTTGGCCTGGAT---------------------------------------------------------------------------------------------TCCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27563062  97 -  28733288 CCTCCAGCCCCACATCCAATGGCTGGGATGTACACCCTCTTACCTAAAGTTGTGTATCCCCTTCTCTGCAGCTAGAGCCCACTTGGCCTGGGT---------------------------------------------------------------------------------------------TCCA
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873804                997192 8116 -   1077187 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=910.000000
s hg38.chr14_KI270722v1_random    154426 1 +    194050 t
s panTro4.chr3                 125229014 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159868828 1 - 202140232 T
i ponAbe2.chr3                 C 0 I 1772
s nomLeu3.chr24                 27563159 1 -  28733288 T
i nomLeu3.chr24                C 0 I 93
s otoGar3.GL873594               6864573 1 -   9725254 t
i otoGar3.GL873594             n 8116 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2637.000000
s hg38.chr14_KI270722v1_random    154427 7 +    194050 gttcgac
s panTro4.chr3                 125229015 7 - 202329955 gttcgac
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27563253 7 -  28733288 gttcgac
i nomLeu3.chr24                I 93 C 0
s otoGar3.GL873594               6864574 7 -   9725254 gatcagc
i otoGar3.GL873594             C 0 I 808
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e ponAbe2.chr3                 159868829 1772 - 202140232 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=31804.000000
s hg38.chr14_KI270722v1_random    154434 121 +    194050 gtggctccccagagttctgtcatgggagtaagcaccagtcatctgcagtgtaactcacttggcaacacatccttattttgtcttcttcctgaaccccgtcccattctgtccctccttgacc
s panTro4.chr3                 125229022 121 - 202329955 gtggctccccagagttctgtcatgggagttagcaccagtcatctgcagtgtaactcgcgtggcaacacatccttattttgtcttcttcctgttccctgtcccattctgtccctccttgacc
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27563260 121 -  28733288 gtggctccccagagttctgtcatgggagtaagcaccagtcatctgcagtgtaactcacttggcaacacatccttattttgtcttcttcctgttccctgtcccgttctgtccctccttgagc
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e ponAbe2.chr3                 159868829 1772 - 202140232 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873594               6864581 808 -   9725254 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=150078.000000
s hg38.chr14_KI270722v1_random    154555 303 +    194050 aatgcttccagtctccttgggatcatgtcccaaataaactacatgcactgaaatctttgtcttaagttctgctcctgggggaatccaaactaagacaTGGTGAATCTTCCATATTTAGGAGGAACTGGTGCCTGTTGAAAATGAATTGTTGTGTTTGTTGGCGAAAAATTCATCTGTTATCCTGAAAGCAAACAAATCCCACAAGAATACCATATTGCCAATATTGTCTGTGTCTCTAGCCTACCAGGTAAGGAGAGCTGCACTGATGCTGGAAGTTGACAACACCTGTGAATGACTCTGGAG
s panTro4.chr3                 125229143 303 - 202329955 aatgcttccagtctccttgggatcaagtcccaaataaactacgtgcactgaaatctttgtcttaagttctgctcctgggggaacccacaatgagacGTGGTGAATCTTCCAAATTTAGGAGGAACTGGTGCCTGTTGAAAATGAATTGTTGTGTTTGCTGGAGAAAAATTCATCTGTTATGCTGGAAGCAAATAAATCCCACAAGAATACTGTATTGCCAATATTGTCTGTGTCTCTAGCTGTGCAGGTAAGGAGAGCTGCACTGACGCTGGAAGTTGCCAACACCTGTGAATGACTCTGTAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159870601 303 - 202140232 aatgcttcCAgtctccttgggatcatgtcccaaataaactatgtgcactgaaatctctgtcttaaggtctgctcctgggggaacccacagtaagacaTGGTGAATCTTCCATATTTAGGTGGAACTGGTGCCTGTTGAAAATCAATTGTTGTGTTTGTTGGAGAAAAATTCATTTGTTATGCTGGAAGCAAATAAATCCCACAAGAATACTGTATTGCCAATATTGTCTCTGTCTCTAGCTGATCACGTAAGGAGAGCTGCACTGATGCTGGTAGTTGCCAACACCTGTGAATGAGTCTGGAG
i ponAbe2.chr3                 I 1772 C 0
s nomLeu3.chr24                 27563381 303 -  28733288 aatgcttccagtctacttgggatcatgtcccaaataaactacttgcactgaaatctttgtcttaaagtctgctcctgggggaacccacactaagacaTGGTGAATCTTCCATATTTAGGAGGAACTGGTGCCTGTTGAAAATGAATTACTGTGTTTGTTGGAGAAAAATTCATCTGTTTTGCTGGAAGCAAACAAATCCCACAAGAATACTGTATTGCCTATATTGTCTGTATCTCTAGCTGAGCAGGTAAGGAGAGCTGCACTGATGCTGGAAGTTGCCAATACCTGTGAATGACTCTGGAG
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873594               6864581 808 -   9725254 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=6046.000000
s hg38.chr14_KI270722v1_random    154858 11 +    194050 --------CCTTCTTGTGG
s panTro4.chr3                 125229446 11 - 202329955 --------CCTTCTTGTGG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159870904 11 - 202140232 --------CCTTCTTGTGG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27563684 11 -  28733288 --------CCTTCTTGTGG
i nomLeu3.chr24                C 0 C 0
s saiBol1.JH378110              46007203 19 -  49021937 CCCCATATCATGCCTGAAG
i saiBol1.JH378110             N 0 I 1452
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873594               6864581 808 -   9725254 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=181589.000000
s hg38.chr14_KI270722v1_random    154869 365 +    194050 ACCTCCACCTTGGAGGAGGTGGCAAACGCTTAGTAGTCTTCCAGGAGTCAACATGTGGGCACTCACGCTGATCTCCATATCATTGTGGAGAGTCAATGTCAAGGCCCCTCTGCCCTTCAAAGCTGTCACATTGTATGTGCCTTAAATGTCACCTGCCAGAAGCAAGCCAGGTTTACCTTTGGACACCAACAGCATTCTTTTCTTTCATtcatcctcctgacttaccagaccctgctatgaatgacttgattgttcttcaacttccaatttaccctcaaaattggaaga-ttttctacccattcaaaataATTGATTTTGCCTTTTTGGAAAGCAGCTCAAAAAGAGATTTCTTGACTAAGTAAAAA
s panTro4.chr3                 125229457 362 - 202329955 ACCTCCACCTTGGAGGAGGTGGCAAATGCTTAGTAGTCTCCCAGGAGTCGACATGCCGGCACTCACACTGATCTCCATATCATTGTGGAGAGTCAATGTCAAGA-CCCTCTGCCCTTCAAAGCTGTCACATTGTATGTGCCTTAGATGACACCTGCCAGAAGCAAGCCAGGTTTACCTTTGGACACCAACAGCATTCTTTCCATTCATTCATCCTCTTGACTTATCAGACCCTGCTATGAATGACTTGATTGTTCTTCAACTTCCAATTTACCCTCAAAATTTGAAGA-TTTTCTACCCTTTCAAAATAATTGATTTTGCCATTTTGGAAAGCAGCTC--ACAGAGATTTCTTGAATAAAAAAATA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159870915 365 - 202140232 CCCTCCACCTTGGAGGAGGTGGCAAATGCTTAGTAGTCTCCCAGGAGTCAACATGCGGGCACTCACGCTGATCTCCATATCATTGTGGAGAGTCAATGTCAAGA-CCCTCTGCCCTTCAAAGCTGTCACATTTTATGTGCCTTAGACGCCACCTGCCAGAAGCAAGCCAGGTTTACCTTTGGACACCAACAGCATTCTTTCCTTTCATtcatcctcctgatttatcagaccctgctatgaatgacttgattgttcatcaacttccaatttaccctcaaaatttgaagatttttctacccattcaaaataACTGATCTTGTCTTTTTGGAAAGCAGCTCACAAAGAGATTTCTTAAATAAATTAAAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27563695 364 -  28733288 ACCTCCACCTTGGAGGGGATGGCAAATGCTTAGTAGCTTCCCAGGAGTCAACATGCGGGCACTCACGCTGATCTCCATATCATTGTGGAGAGTCAATGTCAAGA-CCCTCTGCCCTTCAAAGCTGCCACATTGTATGTGCCTTAGACGCCACCTGCCAGAAGCAAGCCAGGTTTACCTTTGGACACCAACAGCATTCTTTCCATTCATTCGTCCTCCCGACTTATCAGACCCTGCCAAGAATGACTTGATTGTTCTTCAACTTCCAATTTACCCTCAAAATTTGAAGA-TTTTCTACCCGTTCAAAATAATTGATTTTGCCTTTTTGGAAAGCAGCTCACAAAGACATTTCTTGAATAAATAAAAA
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873594               6864581 808 -   9725254 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1294.000000
s hg38.chr14_KI270722v1_random    155234 1 +    194050 -T
s panTro4.chr3                 125229819 1 - 202329955 -T
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871280 1 - 202140232 -T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564059 1 -  28733288 -T
i nomLeu3.chr24                C 0 C 0
s otoGar3.GL873594               6865389 1 -   9725254 A-
i otoGar3.GL873594             I 808 I 7
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2445.000000
s hg38.chr14_KI270722v1_random    155235 5 +    194050 TAATC
s panTro4.chr3                 125229820 5 - 202329955 TGATC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871281 5 - 202140232 TGATC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564060 5 -  28733288 TGATC
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873594               6865390 7 -   9725254 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1240.000000
s hg38.chr14_KI270722v1_random    155240 1 +    194050 -C
s panTro4.chr3                 125229825 1 - 202329955 -C
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871286 1 - 202140232 -C
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564065 1 -  28733288 -C
i nomLeu3.chr24                C 0 C 0
s otoGar3.GL873594               6865397 1 -   9725254 G-
i otoGar3.GL873594             I 7 I 2581
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=140249.000000
s hg38.chr14_KI270722v1_random    155241 289 +    194050 ATTTTTAGGAAGCTTGTATTTGGATGTGTCTGTTGGATGTACATATCATTTTTTGACATACCTATCACACTGTCTGGAATGACACCTCAGTTTTGTCCCTTTTCTTTCAAAGTAGGCCTTTGGGAATCACATTTACTTTCATATAGAAACATGATTTTTCCTCTCAAGAGCTTGTC-TTTGTATTTAGCAAAAAAAAACCTTCTCCATTCTGTAG----AGAAAATCCCCAAATTGTGCAAAACCTCTGGAGAAAGCACTGAGCCCAGAAAATCAGCATTCCAAGAAAAGGACT
s panTro4.chr3                 125229826 289 - 202329955 ATTTTTAGGAAGCGTGTATTTGGATGTGTCCGTTGGACATACCTATCATTTGTTGACATACCTATCACACTGTCTGGAATGACACCTCAGTTTTGTCCCTTTTCTTTCAAAGTAGGCATTTGGGAATCACATTTACTTTTATATAGAAACATCATTTTTCCTCTCAAGAGCTTGTCTTTTGTATTTAGC-AAAAAAAGCCTTCTCCATTCTTTAG----AGAAAATCCCCAAATTGTGCAAAACCTCTGGAGAAAGGACTGAGCCCAGGAAACCAGCATTCCAAGAAAAAGACT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871287 288 - 202140232 ATTTTTAGGAAGCATGTATTTGGATGTGTCCGTTGGACATACCTATCATTTGTTGACATACCTATCACACTGT-TGGAATGACACCTCAGTTTTGTCCCTTTTCTTTCAAAGTAGGCCTTTGGGAATCACATTTACTTTTATATAGAAACATGATTTTTCCTCTCAAGAGCTTGTCTCTTGTATTTAGC-AAAAAAAGCCTTCTCCATTCTGTAG----AGAAAATCCCCAAATTATGCAAAACCTCTGGAGAAAGCACTGGGCCCAGGAAATAAGCATTCCAAGAAAAAGACT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564066 292 -  28733288 ATTTTTGGGAAGCGTGTATTTGGATATGTCCGTTGCACATACCTATCATTTGTTGACATACCTTTCACACTGTCTGGAATGACACCTCAGTTTTGTCCCTTTTCTTTCAAAGTAGGCCTTTGGGAATCACACTTACTTTTATATAGAAACATGATTTTTCCTCTCAAGAGCTTGTCTTTTGTATTTAGCAAAAAAAAGCCTTCTCCATCCTGAAGAAAAAAAAAATCCCCAAATTGGGCAAAACCTCCGGAGAAAGCACTGAGCCCGGGAGATCAGCATTCCAAGAAAAAGA--
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19704708 2945 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122264842 4365 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2190.000000
s hg38.chr14_KI270722v1_random    155530 4 +    194050 CTGA
s panTro4.chr3                 125230115 3 - 202329955 C-GC
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19707653 4 -  19803153 CTGC
i panPan1.JH650580             I 2945 I 237
s gorGor3.chr3                 122269207 4 - 199944510 CTGC
i gorGor3.chr3                 I 4365 I 237
s ponAbe2.chr3                 159871575 4 - 202140232 CTGC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564358 4 -  28733288 CTGC
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=120341.000000
s hg38.chr14_KI270722v1_random    155534 237 +    194050 ACACAGTGTCTGCAATTCTGTGCTGAACTGTTAAATGCAGATGTAGTGAAATTAATAGCTTTTTCAAAATGTACAATATAGTGAATGGGTGTTGCCAATACATTATAATTACCCCGGACTTGTGTGAGGTGGATCTTTTGGAGGAGAACTGGCTTTCTCAGATGAAGGGAATCCTGTCTGTGAATGAAGAAGACAAGGAGGAATGTAGTATTCTTGGGAGAGGCTGCCCTGGTTATC
s panTro4.chr3                 125230118 237 - 202329955 ACACAGTGTCTGCAATTTTGTGCTGAACCGTTAAATGCAGATGTAGTGAAATTAATAGCTTTTTCAAAACGTACAGCATAGTGAATGGGTGTTGCCAATACATTATAATTACCCTGGACTTGTGCGAGGTGGATCCTTTGGATGAAAACTGGCTTTCTCAGATGAAGGGAATCCTCTCTGTGAATGAAGAAGACAAGAAGGAACATAGTATTCTTGGGAGAGGCTGCCCTGGTTTTC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871579 237 - 202140232 ACACAGTGTCTGCAATTGTATGCAGAACTGTTAAATGCAGATGTAGTGAAGTTAATGGCTTTTTCAAAATGTACAATATAGTGAATGAGTGTTGCCAATACATTATAATTACCCTGGACTTGTGTGAGGTGGATCCTTTGGACGAGAACTGGCTTTCTCAGATGAAGGGAATCCTGTCTGTGAATGAAGAAGACAAGGAGGAACATAGTATTCTTGGGAGAGGCTGCCCTGGTTTTC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564362 237 -  28733288 ATACAGTGTCTGCAATTGTGTGCTGAACTGTTAAATGCAGATGTAGTGAAATTAATAGCTTTTTCAAAATGTACAATATAGTGAAAGGGTGTTGCCAATACTTTATAATTATCCTGGACTTGTGTGAGGTGGATCCTTTAGATGAGAACTGGCTTTCTCAGATGAAGGGAAGCCTGTCTATTAATGAAGAAGACAAGGAGGAACATAGTATTCTTGGGAGAGGCTGCACTGGTTTTC
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19707657 237 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269211 237 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=4230.000000
s hg38.chr14_KI270722v1_random    155771 3 +    194050 ATG
s panTro4.chr3                 125230355 3 - 202329955 ATG
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19707894 3 -  19803153 ATG
i panPan1.JH650580             I 237 I 551
s gorGor3.chr3                 122269448 3 - 199944510 ATG
i gorGor3.chr3                 I 237 I 550
s ponAbe2.chr3                 159871816 3 - 202140232 ATG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564599 3 -  28733288 ATG
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=47868.000000
s hg38.chr14_KI270722v1_random    155774 95 +    194050 ATGTCAGTGGTCCTTTAACCCAAAAGCCCACAGATATTCTCCC----TAACCACAGAAAGTATAATTATTTACCACCCCCCAAGAATCTTGCTGACTTC
s panTro4.chr3                 125230358 98 - 202329955 ATGTCAGTGGTCCTTTAACCCAAAAGCCCACAGATGTTCTCCCTAAGTAACCACAAAAAGTATGATTATTTGCCA-CCCCCAAGAATCTTGCTGACTTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871819 99 - 202140232 TTGTCAGTGGTCCTTTAACCCAAAAGCCCACATATGTTCTCCCTAAATAACCACAGAAAGTATAATTATTTACCACCCCCCAAGAATCTTGCTGACTTT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564602 99 -  28733288 ATGTCAGTGATCCTTTAACCCAAAAGCCCACAGATGTTCTCCCTAACTAACCACAGAAAGTATAATTATTTACCACCCCCCAAGAATCTTGCTGACTTT
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              291204 1966 -   1849528 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=422.000000
s hg38.chr14_KI270722v1_random    155869 1 +    194050 A
s panTro4.chr3                 125230456 1 - 202329955 A
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871918 1 - 202140232 A
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564701 1 -  28733288 A
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1              293170 1 -   1849528 G
i rhiRox1.KN299240v1           I 1966 C 0
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2394.000000
s hg38.chr14_KI270722v1_random    155870 3 +    194050 TTT
s panTro4.chr3                 125230457 3 - 202329955 TTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871919 2 - 202140232 -TT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564702 3 -  28733288 TTT
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01008733v1       394 3 +      3267 ATT
i nasLar1.chrUn_JMHX01008733v1 N 0 I 23
s rhiRox1.KN299240v1              293171 2 -   1849528 -TT
i rhiRox1.KN299240v1           C 0 I 1
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=910.000000
s hg38.chr14_KI270722v1_random    155873 1 +    194050 T
s panTro4.chr3                 125230460 1 - 202329955 T
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871921 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564705 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299240v1              293174 1 -   1849528 T
i rhiRox1.KN299240v1           I 1 I 17
e nasLar1.chrUn_JMHX01008733v1       397 23 +      3267 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=7914.000000
s hg38.chr14_KI270722v1_random    155874 14 +    194050 TTCACTGAGTTCTT
s panTro4.chr3                 125230461 14 - 202329955 TTCACTGAGTTCTT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871922 14 - 202140232 TTCACTGAGTTCTT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564706 14 -  28733288 TTCACTGAGTTCTT
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              293175 17 -   1849528 I
e nasLar1.chrUn_JMHX01008733v1       397 23 +      3267 I
e saiBol1.JH378110              46007222 1452 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=476.000000
s hg38.chr14_KI270722v1_random    155888 1 +    194050 G
s panTro4.chr3                 125230475 1 - 202329955 G
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871936 1 - 202140232 G
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564720 1 -  28733288 G
i nomLeu3.chr24                C 0 C 0
s saiBol1.JH378110              46008674 1 -  49021937 A
i saiBol1.JH378110             I 1452 C 0
e rhiRox1.KN299240v1              293175 17 -   1849528 I
e nasLar1.chrUn_JMHX01008733v1       397 23 +      3267 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=4485.000000
s hg38.chr14_KI270722v1_random    155889 3 +    194050 TTC
s panTro4.chr3                 125230476 3 - 202329955 TTC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871937 3 - 202140232 TTC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564721 3 -  28733288 TTC
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01008733v1       420 3 +      3267 CTC
i nasLar1.chrUn_JMHX01008733v1 I 23 C 0
s rhiRox1.KN299240v1              293192 3 -   1849528 CTC
i rhiRox1.KN299240v1           I 17 C 0
s saiBol1.JH378110              46008675 3 -  49021937 CTC
i saiBol1.JH378110             C 0 I 8
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1169.000000
s hg38.chr14_KI270722v1_random    155892 3 +    194050 AGA
s panTro4.chr3                 125230479 3 - 202329955 AGA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871940 3 - 202140232 AGA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564724 3 -  28733288 AGA
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01008733v1       423 1 +      3267 A--
i nasLar1.chrUn_JMHX01008733v1 C 0 I 8
s rhiRox1.KN299240v1              293195 1 -   1849528 A--
i rhiRox1.KN299240v1           C 0 I 8
e saiBol1.JH378110              46008678 8 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=3309.000000
s hg38.chr14_KI270722v1_random    155895 7 +    194050 AACGAAG
s panTro4.chr3                 125230482 7 - 202329955 AACCAAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871943 7 - 202140232 AACCAAG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564727 7 -  28733288 AACCAAG
i nomLeu3.chr24                C 0 C 0
e rhiRox1.KN299240v1              293196 8 -   1849528 I
e nasLar1.chrUn_JMHX01008733v1       424 8 +      3267 I
e saiBol1.JH378110              46008678 8 -  49021937 I
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-2256.000000
s hg38.chr14_KI270722v1_random    155902 3 +    194050 -ATT
s panTro4.chr3                 125230489 3 - 202329955 -ATT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871950 3 - 202140232 -ATT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564734 3 -  28733288 -ATT
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01008733v1       432 2 +      3267 -AT-
i nasLar1.chrUn_JMHX01008733v1 I 8 N 0
s rhiRox1.KN299240v1              293204 2 -   1849528 -AT-
i rhiRox1.KN299240v1           I 8 N 0
s saiBol1.JH378110              46008686 3 -  49021937 CTT-
i saiBol1.JH378110             I 8 N 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=8679.000000
s hg38.chr14_KI270722v1_random    155905 17 +    194050 GAGAGGAATTATTCCCA
s panTro4.chr3                 125230492 17 - 202329955 GAGAGGAATTACTCCCA
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871953 17 - 202140232 GAGAGGAATTACTCCAA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564737 17 -  28733288 GAGAGGAATTACTCCCA
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=36322.000000
s hg38.chr14_KI270722v1_random    155922 53 +    194050 GAATCAGCATGCAGTACTCACCTTTGAAGCCTTTGAGCTCTTTGCTTTCTTTC
s panTro4.chr3                 125230509 53 - 202329955 GAACCAGTGTGCAGTACTCACCTTTGAGCCCTTTGAGCTCCTTGCTTTCTTTC
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159871970 53 - 202140232 GAACCAGTGtgcagtactcacctttgagtcctttgagctctttgctttctttc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564754 53 -  28733288 GAACCAGTGTGCAGTACTCACCTTTGAGCCCTTtgagctctttgctttctttc
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01289337v1       451 47 +       985 GAACTGGTGTGCCATACTCAC--TCGAGCCCTTTGAGCTCTGTGCTTCC----
i nasLar1.chrUn_JMHX01289337v1 N 0 C 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=320.000000
s hg38.chr14_KI270722v1_random    155975 4 +    194050 ACAG
s panTro4.chr3                 125230562 4 - 202329955 ACAG
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872023 4 - 202140232 atag
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564807 2 -  28733288 gc--
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01289337v1       498 4 +       985 ACAG
i nasLar1.chrUn_JMHX01289337v1 C 0 C 0
s rhiRox1.KN298262v1              207901 4 -   3004993 ATGG
i rhiRox1.KN298262v1           N 0 N 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=11224.000000
s hg38.chr14_KI270722v1_random    155979 26 +    194050 CTTGTTTTTTCCTGCCCGTTTTTCCT
s panTro4.chr3                 125230566 26 - 202329955 CTTGTTTTTTCCTGCCTGTTTTTCCT
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872027 26 - 202140232 cttgttttttcctgcctgtttttcct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564809 23 -  28733288 ---tttctttcctgcctgtttttcct
i nomLeu3.chr24                C 0 C 0
s nasLar1.chrUn_JMHX01289337v1       502 20 +       985 -CTGGCCTTTCCTACCCTGGT-----
i nasLar1.chrUn_JMHX01289337v1 C 0 N 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=20688.000000
s hg38.chr14_KI270722v1_random    156005 43 +    194050 GTCTTCTTTCAGGCTAAGCCTCCCTCCTTTTGGTAGAGGC-TTT
s panTro4.chr3                 125230592 44 - 202329955 Gtcttctttcaggctaagcctccctccttttggtagaggctttt
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872053 44 - 202140232 gtcttctttcatgctaagcctccctcctttaggtagaggctctt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564832 44 -  28733288 gtcttctttcaggctaagacgccctccttttggtagaggctttt
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=22020.000000
s hg38.chr14_KI270722v1_random    156048 29 +    194050 TTATACCATTTGGGAACAGGTTTGG--ATAA
s panTro4.chr3                 125230636 29 - 202329955 ttataccatttgggaactggtttgg--ataa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872097 29 - 202140232 ttataccatttgggaagtggtttgg--ataa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564876 29 -  28733288 ttataccatttgagaactggtttgg--ataa
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378406 29 + 153844193 --TTGATATTCAAGATCCGGTTTGGTTATAA
i nasLar1.chr7                 N 0 C 0
s rhiRox1.KN299482v1             8796206 29 -   9259753 --TTGATATTCAAGATCCGGTTTGGTTATAA
i rhiRox1.KN299482v1           N 0 C 0
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2100.000000
s hg38.chr14_KI270722v1_random    156077 1 +    194050 G
s panTro4.chr3                 125230665 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872126 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564905 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378435 1 + 153844193 G
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796235 1 -   9259753 G
i rhiRox1.KN299482v1           C 0 C 0
s tarSyr2.ABRT02242777v1            4443 1 +      8555 G
i tarSyr2.ABRT02242777v1       N 0 I 90
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=110836.000000
s hg38.chr14_KI270722v1_random    156078 101 +    194050 -CTACCTTAATGAAGGACCACACATCCCTCCAGAGATGATAAAAGACTTTCTgtcttttctggtaagtcctttctggaataaagatcagtgtgttt--ctggat
s panTro4.chr3                 125230666 101 - 202329955 -ctaccttaatgaaggaccacacatccctccagagatgataaaaggctttttgtcttttctggtaagtcctttctggaataaagatcagtgtcttt--ctggat
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872127 101 - 202140232 -ctaccttaatgaaagaccacacatccctccagagataataaaagactttttgtcttttctggtaagtcctttctggaataaagatcagtgtcttt--ctggat
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27564906 101 -  28733288 -ctaccttaatgaaggaccacacatccctccagagatgataaaagactttttgtcttttctggtaagtcctttctggaataaagatcagtgtcttt--ctggat
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378436 102 + 153844193 ACCACCTTAATAAAGAACCTTACATCCCTCCTGAGATGATAAAAGACTT--Tgtcttttctggtaagtcctttctggtataaagacagaggtctctggcttgag
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796236 102 -   9259753 ACCACCTTAATAAAGAACCTTACATCCCTCCTGAGATGATAAAAGACTT--Tgtcttttctggtaagtcctttctggtataaagacagaggtctctggcttgag
i rhiRox1.KN299482v1           C 0 C 0
e panPan1.JH650580              19707897 551 -  19803153 I
e tarSyr2.ABRT02242777v1            4444  90 +      8555 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=2562.000000
s hg38.chr14_KI270722v1_random    156179 3 +    194050 cag
s panTro4.chr3                 125230767 3 - 202329955 tag
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872228 3 - 202140232 tag
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565007 3 -  28733288 tag
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378538 3 + 153844193 tat
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796338 3 -   9259753 tat
i rhiRox1.KN299482v1           C 0 C 0
s tarSyr2.ABRT02242777v1            4534 3 +      8555 CAG
i tarSyr2.ABRT02242777v1       I 90 I 127
e panPan1.JH650580              19707897 551 -  19803153 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=127627.000000
s hg38.chr14_KI270722v1_random    156182 139 +    194050 tcttggcgtctacggattttacattctgtctgtgaggcatata--ttctagtgaatttactttcaaatttgtctgcatgcctagtttaatat----tttgatctgcatgtctaggttaaaatttttgtgaacgatcttatctttg
s panTro4.chr3                 125230770 139 - 202329955 tcttggtttctacagattttacattctgtctgtgaggcatata--ttctagtgaatttactttcaaattggtctgcatgcctagtttaatat----tttgatctgcatgtctaggttaaaatttttgtgaacaatcttatcttgg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872231 139 - 202140232 tcttggtttctacagattttccattctgtctgcaaggcatata--ttctagtgaatttgctttcaaattggtctgcatgcctagtttaatat----tttgatctgcatgttcaggttaaaatttttgtgaacaatcttctcttgg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565010 139 -  28733288 tcttggtttctacagattttacattctgtctgtgaggcatata--ttctagtgaatttacttgcaaattggtctgcatgcctagtttaatat----tttgatctgcatcactaggttaaaatttttgtgaacaatcttgtcttgg
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378541 138 + 153844193 tc-cggtttctaccaaattcactttctatctgtgaggcatgtcatttctggtgaattcactt-----ttggtctcagcgtgtagtttaatattttgtttgatctgcctgcctgggttaaga-ttttgtgaacactcatctcttgg
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796341 138 -   9259753 tc-cagtttctaccgaattcacattctatctgtgaggcatgtcatttctggtgaattcactt-----ttggtctcagcgtgtaatttaatattttgtttgatctgcctgcctgggttaaga-ttttgtgaacactcatctcttgg
i rhiRox1.KN299482v1           C 0 C 0
e panPan1.JH650580              19707897 551 -  19803153 I
e tarSyr2.ABRT02242777v1            4537 127 +      8555 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e gorGor3.chr3                 122269451 550 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=31386.000000
s hg38.chr14_KI270722v1_random    156321 17 +    194050 tttcttttgattttatt
s panTro4.chr3                 125230909 17 - 202329955 tttcttttgatttcgtt
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19708448 17 -  19803153 TTTCTTTTGATTTCGTT
i panPan1.JH650580             I 551 C 0
s gorGor3.chr3                 122270001 17 - 199944510 tttcttttgattttgtt
i gorGor3.chr3                 I 550 C 0
s ponAbe2.chr3                 159872370 17 - 202140232 tttcttttcatttggtt
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565149 17 -  28733288 tttcttttgattttgtt
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378679 17 + 153844193 tgtcctgtgatttggtt
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796479 17 -   9259753 tgtcctgtgatttggtt
i rhiRox1.KN299482v1           C 0 C 0
e tarSyr2.ABRT02242777v1            4537 127 +      8555 I
e otoGar3.GL873594               6865398 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1132.000000
s hg38.chr14_KI270722v1_random    156338 1 +    194050 -t
s panTro4.chr3                 125230926 1 - 202329955 -t
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19708465 1 -  19803153 -T
i panPan1.JH650580             C 0 C 0
s gorGor3.chr3                 122270018 1 - 199944510 -t
i gorGor3.chr3                 C 0 C 0
s ponAbe2.chr3                 159872387 1 - 202140232 -t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565166 1 -  28733288 -t
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378696 1 + 153844193 -t
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796496 1 -   9259753 -t
i rhiRox1.KN299482v1           C 0 C 0
s tarSyr2.ABRT02242777v1            4664 1 +      8555 g-
i tarSyr2.ABRT02242777v1       I 127 N 0
e otoGar3.GL873594               6865398 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=36256.000000
s hg38.chr14_KI270722v1_random    156339 24 +    194050 gattctttatcc-----ttgtttctgaaa
s panTro4.chr3                 125230927 24 - 202329955 gactctttatcc-----ttgtttctgaaa
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19708466 24 -  19803153 GACTCTTTATCC-----TTGTTTCTGAAA
i panPan1.JH650580             C 0 C 0
s gorGor3.chr3                 122270019 24 - 199944510 gactctttatcc-----ttgtttctgaaa
i gorGor3.chr3                 C 0 C 0
s ponAbe2.chr3                 159872388 18 - 202140232 gactct-----------ttgtttctgaaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565167 24 -  28733288 gactctttatcc-----ttgtttctgaaa
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378697 29 + 153844193 caCTCGTTTCCCTGGATTTTTTTCTAAAA
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796497 29 -   9259753 cactcgtttccctggatttttttctaaaa
i rhiRox1.KN299482v1           C 0 C 0
e otoGar3.GL873594               6865398 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1601.000000
s hg38.chr14_KI270722v1_random    156363 1 +    194050 t
s panTro4.chr3                 125230951 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19708490 1 -  19803153 G
i panPan1.JH650580             C 0 C 0
s gorGor3.chr3                 122270043 1 - 199944510 g
i gorGor3.chr3                 C 0 C 0
s ponAbe2.chr3                 159872406 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565191 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378726 1 + 153844193 A
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796526 1 -   9259753 a
i rhiRox1.KN299482v1           C 0 C 0
s otoGar3.GL873530              33263182 1 -  36342412 t
i otoGar3.GL873530             n 2581 n 2581
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=339778.000000
s hg38.chr14_KI270722v1_random    156364 203 +    194050 tctcccaagagcaaaagtaaacattctaaatggtggg-tcaggatggctaactaaaagctgccagggcagttgtcaccctctaaaacactggcctaaacccctggaattccataagaggatttataggattttctctactcttgcaagattaatgaaaaacagaacgctcacagggtgcggtgcctcatgcctgtaatcccagc
s panTro4.chr3                 125230952 203 - 202329955 tctcccaagagcaaaagtaaacattctaaatggtggg-tcaggatggctaactgaaacctgccagggcagttgtcaccctctaaaacactggcctaaacccctgaaattccatgacaggatttataggattttctctactctttcaagattaatgaaaaacagaatggttgcagggtgtagtgcctcatgcctgtaatcccagc
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19708491 203 -  19803153 TCTCCCAAGAGCAAAAGTAAACATTCTAAATGGTGGG-TCAGGATGGCTAACTGAAACCTGCCAGGGCAGTTGTCACCCTCTAAAACACTGGCCTAAACCCCTGAAATTCCATGACAGGATTTATAGGATTTTCTCTACTCTTTCAAGattaatgaaaaacagaatggttgcagggtgcagtgcctcatgcctgtaatcccagc
i panPan1.JH650580             C 0 C 0
s gorGor3.chr3                 122270044 203 - 199944510 tctcccaagagcaaaagcaaacattctaaatggtggg-tcaggatggctaactaaaagctgccagggcagttatcaccctctaaaacactggcctaaacctctgaaattccatgacaggatttataggattttctctactctttcaagattaatgaaaaacagaatGGTTgcagggtgcagtgcctcatgcctgtaatcccagc
i gorGor3.chr3                 C 0 I 577
s ponAbe2.chr3                 159872407 203 - 202140232 tctcccaagagcaaaagtaaacattctaaatggtggg-tcaggatggctaactaaaagctgccagagcagttgtcaccctctaaaacactggcctgaacccctgaaattccatgacaggatttataggattttctctattcttgcaagattaatgaaaaacagaatggttgcagggtgcagtgcctcatgcctgtaatcccagc
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565192 203 -  28733288 tcccccaagagcaaaagtaaacattctaaatggtggg-tcaagatggctaactaaaagctgccacggcagttgtcaccctctaaaacactggcctaaacccctgaaattccatgacaggatttataggattttctcttctcttgcaagattaatgaaaaacagaatggttgccaggtgtggtggctcctgcctgtaatcccagc
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378727 149 + 153844193 TCTTCC--------------Acgttttcaatagtgggctcaggatgtctaattaaaagccactagggcagttgccaccatttaaaccacc-------aatcctgacattctctgaaaggataaaaaagatattc----------------------------------tggccgggcacggtggctcacacctgtaatcccagc
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796527 149 -   9259753 tcttcc--------------acgttttcaatagtgggctcaggatgtctaattaaaagccactagggcagttgccaccatctaaaccacc-------aatcctgacattctctgaaaggataaaaaagatattc----------------------------------tggctgggcacggtggctcacacctgtaatcccagc
i rhiRox1.KN299482v1           C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=11808.000000
s hg38.chr14_KI270722v1_random    156567 7 +    194050 actttca
s panTro4.chr3                 125231155 7 - 202329955 actttgg
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19708694 7 -  19803153 actttgg
i panPan1.JH650580             C 0 I 578
s ponAbe2.chr3                 159872610 7 - 202140232 actttgg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565395 7 -  28733288 actttgg
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378876 7 + 153844193 actttgg
i nasLar1.chr7                 C 0 C 0
s rhiRox1.KN299482v1             8796676 7 -   9259753 actttgg
i rhiRox1.KN299482v1           C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122270247 577 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=79288.000000
s hg38.chr14_KI270722v1_random    156574  89 +    194050 gaggccaagg----------tgggtggatcac--gaggtcaagagatcaagaccatcttggccaacatggtgaaacctcgtctctattaaaatac---aaaaaa
s panTro4.chr3                 125231162  92 - 202329955 gaggccaagg----------tgggtggatcag--gaggtcaagagatcaagaccatcctggccaacatggtgaaacctcgtctctattaaaatacaaaaaaaaa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872617  90 - 202140232 gaggccaagg----------tgggtggatcac--aaggtcaagagatcaagaccatcctggccaaaatggtgaaacctcgtttctattaaaatac--aaaaaaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565402  90 -  28733288 gaggccaagg----------tgggcggatcac--gaggtcaagagatcatgaccatcctcgccaacatggtgaaacctcgtctctattaaaatac--aaaaaaa
i nomLeu3.chr24                C 0 C 0
s nasLar1.chr7                 151378883 101 + 153844193 gaggccgaggcgggcagagacgggcagatcacctgaggttgggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaaat--acaaaa-
i nasLar1.chr7                 C 0 N 0
s rhiRox1.KN299482v1             8796683  92 -   9259753 gaggccgaggcgggcagagacgggcagatcacctgaggttgggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaa------------
i rhiRox1.KN299482v1           C 0 C 0
e panPan1.JH650580              19708701 578 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122270247 577 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=236079.000000
s hg38.chr14_KI270722v1_random    156663 344 +    194050 aaaaaaaaattagccaggcatggtggcatgtgcctgtagtcccagctactcgagaggctgaggcaggagaatcgtttgaacccgggagagtggaagttgcagtgagccgagattgtgccactgcatgagagcctggtga--cagagcaagact-ccatct--aaaaaacaacaaa-aaacaagaa----------------------------acaaaacaaaattgcattctccaacattaaggcatgctaggttttctgggactccagctggttacatattatgactcat----------atgtttatcttgctgggaaaattacatcaaggaaaatacagatctccaatagtcattatttg---------------------------aaaaacctgcaattatagagttaa
s panTro4.chr3                 125231254 342 - 202329955 aaaaaaaaattagccaggcatggtggcatgtgcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacctggga-agtggaggttgcagtgagccgagattgtgccactgcatgagagcctggtga--tagagcaagagt-ccatct--aaaaacaaacaaacaaacaaaca------------------------------aaaacagaatcgcattctcaaacattaaggcatgctaggttttctgggactccagctgattatatattatggctcat----------atttttaacttgctgggaaaattacatcaaggaaaattcagatctacaatagtcattatttg---------------------------aaaaacctgcaattatagagttaa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159872707 345 - 202140232 aaaaaaaaattagccaggcatggtggcatgtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaatctggga-agtggaggttgcagtaagccgagattgtgccactgcatgagagcctggtga--cagagcaagact-ccatctaaaaaaaaaaacaaa-aaccaaaaa----------------------------acaaaacagaatcgcattcccaaacattaagacatgctaggttttctgggactccagctggttatatattatggctcat----------atttttaacttgttgggaaaattacatcaaggaaaattcagatctccaatagtcattatttg---------------------------aaaaacctgcaattatagagttaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565492 342 -  28733288 aaaaaaaaaatagccaggcatggtggcctgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacctggga-ggtggaggttgcagtgagccgagattgtgccactgcatgagagcctggcga--cagagcaagact-ccatct---aaaaaaaccaga-aaaaaaaaa----------------------------aaaaaacagaatcgcattctcaaacattaaggcatgctagggttcctgggactccaactggttatatattatggctcat----------ttttttaacttgctgggaaaattacattaaggaaaattcagatctccaatagtcattatttg---------------------------aaaaacctgcaattatagagttaa
i nomLeu3.chr24                C 0 C 0
s rhiRox1.KN299482v1             8796775 411 -   9259753 aatacaaaatcagccaggtgtggtggcgcatgcctgtaattccagctactcaggaggctgaggcaggagaatcgcttgaacccagga-ggtggaggttgcagtgagccgagattgtgccactgcactccagcttgggcaacaagagcaaaactcccatct--caaaaaaaaaaaa-aaaaaaaaaagaaattctttgctcttgagagattaataaaaatcagaatgggattctcaacccttataacatgctaggctttctgggactccagccagttacatatgatagcccattcttgtgaacattttttaaatgatgggcaaattctgtcaaggaaaaatcagagctcaaatggtcattacttgaattttcaaaaaaaaaaaaaaaaacccaaaactctgcaactatagagttaa
i rhiRox1.KN299482v1           C 0 N 0
e panPan1.JH650580              19708701 578 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122270247 577 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=78258.000000
s hg38.chr14_KI270722v1_random    157007 146 +    194050 tatgtagagatttctaagttctctgcatacctctctctgttcttcttctacccattcactgtttatggaattctggcctgtgccccaaatcttaaagagttttcaaattaatggctttataaattacaacagcttcatgatatcaa
s panTro4.chr3                 125231596 146 - 202329955 catgtagagttttctaagttctctgtatacctctctctgtccttcttctgcccattcactgtttatggaattctggcctgtgccccaaatcttaaagagttttcaaattaatggctttataaattacaacagcttcatgatatcaa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159873052 146 - 202140232 catgtagaattttctaagttctctgtatacctctctctgttcttcttctgcccattcactgtttatggaattctggcctgtgccccaaatcttaaagagttttcaaattaatggctttataagttacaacagcttcatgatatcaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565834 146 -  28733288 catgtagagttttctaagttctctgtatacctctctctgttcttcttctgcccattcactgtttatggaattctggcctgtgccccaaatcttcaagagttttcaaattaatggctttataaattacaacagcttcgtgatgtcaa
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19708701 578 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122270247 577 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=4230.000000
s hg38.chr14_KI270722v1_random    157153 3 +    194050 caa
s panTro4.chr3                 125231742 3 - 202329955 caa
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19709279 3 -  19803153 CAA
i panPan1.JH650580             I 578 I 639
s gorGor3.chr3                 122270824 3 - 199944510 caa
i gorGor3.chr3                 I 577 I 639
s ponAbe2.chr3                 159873198 3 - 202140232 caa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565980 3 -  28733288 caa
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=324267.000000
s hg38.chr14_KI270722v1_random    157156 638 +    194050  
s panTro4.chr3                 125231745 639 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159873201 645 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27565983 644 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19709282 639 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122270827 639 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-311.000000
s hg38.chr14_KI270722v1_random    157794 1 +    194050 a
s panTro4.chr3                 125232384 1 - 202329955 c
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19709921 1 -  19803153 C
i panPan1.JH650580             I 639 I 459
s ponAbe2.chr3                 159873846 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27566627 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122270827 639 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1000.000000
s hg38.chr14_KI270722v1_random    157795 1 +    194050 g
s panTro4.chr3                 125232385 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122271466 1 - 199944510 g
i gorGor3.chr3                 I 639 I 462
s ponAbe2.chr3                 159873847 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27566628 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19709922 459 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=225892.000000
s hg38.chr14_KI270722v1_random    157796 456 +    194050 tattactatctcatgactaaaagtct-aaataaaaaaaacataagatctgttatttgtgtgtgtatatgtggtcagatgtgtttatgcatatacacatgtattttgttatatgttttgtctacatggtaaaatctggtgtagtgatcctgaaatcccttaagaaagtctatttag----ataaatgacctcatgaaatatacaataattaacctaaatgctttttaattcatgtgactt-----aatctgtgataaataaactattctaaaattagtggtaaaatataaatagaaatatcttcaaaatggtcagtgtacgttttacccgggtttactggtcaaatggttttatatttgtctcttctagaAATCTGTTATTAtgtgggtggcaagccacccaggtgccgaggtaagagaccaagggcaagagctgttccagtgtaataaagaaaatatataaattaa
s panTro4.chr3                 125232386 458 - 202329955 ttttactatctcatgactaaaagtctaaaataaaagaaccataagatctgttatttgtgtgtgtatatgtggtcagatgtgtttgtgcatatacacatgtattttgttatatgttttgtctacatggtaaaatctggtgtagtgatccagaaatcccttaagaaagtctatttag----ataaatggcctcatgaaatatacaataattaacctaaatgctttttaattcatgtgacttaattgaatctgtg----ataaactgttctaaaattagtggtcaaataaaaatagaaatatcttcaaaatggccagtgtacattttacccaggtttactggtcagatggttttatatttgtctcttctagaAATCTGTTATTAtgtgggtggcaaaccacccaggtgccgaggcaagagactgagggcaagagctgttccagtgtaataaagaaaatatataaaataa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159873848 462 - 202140232 cattactatctcatgactagaagtctaacataaaaaaaccataagatctgttatttgtgtgtgtatatgtagtcagatgtgtttatgcatatacacatgtattttgttatatgttttgtctacatggtaaaatctggtgcagtgatccagaaagcccttaagaaagtctatttag----ataaatggcctcatgaaatatacaataataaacctaaattctttttaattcatgtgacttagttaaatctgtgataaataaactattctaaaattagcggtaaaataaaaatagaaatatcttcaaaatggtcagtgtacattttacccgagattactgctcagatggttttatatttgtctcttctagaAATCTGTTATTAtgtgggcagcaagccacccaggtgccgaggcaagagaccgagggcaagagctcttccagtgtaataaagaaaatatataaaataa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27566629 462 -  28733288 tattactatctcatgactaaaagcctaaaataaaaaaactataagatctgttatttgtgtgtgtatatgtggtcagatgtgtttatgcatatacacatgtattttgttatatgttgtgtctacatggtaaaatctggtgtagtgagccagaaatcccttaagaaagtctatttagataaataaatggcctcatgaaatatacaataattaacctaaatgcttttaagttcatgttacttaattaaatctgtaataaataaactattctaaaattagtggtaaaataaaaatagaaatatcttcaaaatggtcagtgtacattttacccgggtttactggccagatggttttatatttgtctcttctagaAGTCTGTTATTAtgtgggcagcaagccacccaggtgctgaggcaaaagaccgagggcatgagctgttccagtgtaataaagaaaatatataaa----
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19709922 459 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122271467 462 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=3580.000000
s hg38.chr14_KI270722v1_random    158252 3 +    194050 gaa
s panTro4.chr3                 125232844 3 - 202329955 gaa
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19710381 3 -  19803153 gaa
i panPan1.JH650580             I 459 I 2000
s gorGor3.chr3                 122271929 3 - 199944510 gaa
i gorGor3.chr3                 I 462 I 1349
s ponAbe2.chr3                 159874310 3 - 202140232 gaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27567091 2 -  28733288 -aa
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=602332.000000
s hg38.chr14_KI270722v1_random    158255 1270 +    194050  
s panTro4.chr3                 125232847 1260 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159874313 1263 - 202140232  
i ponAbe2.chr3                 C 0 I 695
s nomLeu3.chr24                 27567093 1303 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122271932 1349 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=18176.000000
s hg38.chr14_KI270722v1_random    159525 74 +    194050 tctgaggtgggagggttgcttcagcccaggatgttgaggctgcagtgaactgtgattgtgccactgcactgcag
s panTro4.chr3                 125234107 74 - 202329955 gctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaactgtgattgtgccactgcactccag
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27568396 74 -  28733288 gctgaggtgggagggttgtttgagcatgggaggttgaggctgcagtgaactgtgattgtgccactgcactccag
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159875576 695 - 202140232 I
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122271932 1349 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1077.000000
s hg38.chr14_KI270722v1_random    159599 3 +    194050 cat
s panTro4.chr3                 125234181 3 - 202329955 cat
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122273281 3 - 199944510 cct
i gorGor3.chr3                 I 1349 I 1259
s nomLeu3.chr24                 27568470 3 -  28733288 cat
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159875576 695 - 202140232 I
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=34842.000000
s hg38.chr14_KI270722v1_random    159602 144 +    194050 gggtggcagattgagacc-tgtctcaaataaaataaaataataaaaTTGTAATTAATATGGATAATTCTTTTTGTGGGGTGGGGGAacaggatcccactctgtcacccaggctggaatgcagtggcaagatcatagctcactgcc
s panTro4.chr3                 125234184 144 - 202329955 gggtggcagatttagatt-tgtctcaaataaaataaaataataaaaTTTTAATTAATATGGATAATTCTTTTTGTGCGGTGGGGGAacaggatcccactctgtcacccaggctggaatgcagtggcatgatcatagctcactgca
i panTro4.chr3                 C 0 C 0
s nomLeu3.chr24                 27568473 144 -  28733288 gggtggcagagtaagaccttgtctcaaataaaataaaataataaaaTTGTAATTAATATGGATTATTCTTTTTGTAGGGT-GGGGAacaggatcccactctgtcacctaggctggaatgcagtggcatgatcatagctcactgca
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159875576 695 - 202140232 I
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122273284 1259 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=258584.000000
s hg38.chr14_KI270722v1_random    159746 498 +    194050 acctcgaactcctgggctccagcaatcctcctgcctcagcctcccaaagtgctgggattacaggtgtaagccaccatgcctggcCTAACTAATATATATAATTCTATATAAAAGTGTGCCTTAAAAAGTAGGATAAGTTTTTAATAAGAAAAAAtgtataagaaatgcatacaaatatgctctttattgagaaagaaataataattttatataatttaaaggttatttaaaggttgtttcaaaatattgattcag--gaaagacagtgaaatgttaaagaagatccagtaagtagaagagagagaggtgaagaaagttattgatagggagatggagacaggagaaggttgaaaagaaaagaaatatttcacatggcaaagaatcttgtgtggtaaattttcatcctaaactaaaatggctagttatttaagagggaaagtacaggacaaagtggaaaacccaagcacgtcaccaatggtctgagtaactcatttgtgaaa
s panTro4.chr3                 125234328 500 - 202329955 acctcgaactcctgggctccagcaatcctcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggcCTAACTAATATATATAATTCTATATAAAAGTGTGCCTTAAAAAGTAGGATGAATTTTTAATAAGAAAAAAtgtataagaaatgcatacaaatatgctctttattgagaaagaagtaataattttatataatttggaggttatttaaaggttgtttcaaaatattgattcagcaaaaaaacagtgaaatgttaaagaagaaccagtaagtagaagagagagatgcgaagaaagttattgatagggagacggagataggagaaggttgaaaagaaaagaaatatttcacatgacaaagaatcttgtgtggtaaattttcatcctaaactaaaatgtctagttatttaagagggaaagtacaggacaaagtggaaagcccaagcatgtcaccaatggtctgagtaactcatttgtgaaa
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159876271 494 - 202140232 ACctcaaactcctgggctccagcaatcctcctgcctcagcctcccaaagtgctgggattacagatgtgagccaccatgcctggTCTAACTGATATATATAATTCTATATAAAAGTGTGCCTTAAAAAGTAGGATGAGTTTTTAATAAGGaaaaatgtataagaaatgcatacaaatatgctctttattgagaaagaaataa----tttatataatttgaaggttatttaaaggttgtttcaaaatattgactcag--gaaagacagtgaaatgttaaagaagaaccagcaaatagaagagagggatttgaagaaagttattgatagggagatggagataggagaaggttgaaaagaaaagaaatatttcacatgacaaggaatcttgtgtggtaaattttcatcctaaactaaaatggctagttatttaagagggaaagtacaggactaagtggaaagcccaagcatgtcaccaatggtctgagtaactcatttgtgaaa
i ponAbe2.chr3                 I 695 C 0
s nomLeu3.chr24                 27568617 497 -  28733288 acctcgaactcctgggctccagcaatcctcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggcCTAACTAATATATACAATTCTATATAAAAGTGTGCCTTAAAAAGTAGGATGTGTTTTTAATAAGAaaaagtgtataagaaatgcatacaaatatgctctttattgagaaagaaataataattttatataatttgaaggttatttaaaggttgtttcaaaatattgattcag--gaaggacagtgaaatgttaaagaagaaccagtaagtagaagagagtgatgtgaagaaagttattgatagggagatggagatagcagaaggttgaaaagaaaagaaatatttcacatgacaaagaatcttgtgtggtaaattttcatcctaaac-aaaatggctagttatttaacagggaaagtataggacaaagtgggaagcccaagcatgtcaccaatggtctgagtaattcatttgtgaaa
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122273284 1259 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=187.000000
s hg38.chr14_KI270722v1_random    160244 1 +    194050 a
s panTro4.chr3                 125234828 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122274543 1 - 199944510 g
i gorGor3.chr3                 I 1259 I 2915
s ponAbe2.chr3                 159876765 1 - 202140232 a
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27569114 1 -  28733288 a
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=780.000000
s hg38.chr14_KI270722v1_random    160245 2 +    194050 ga
s panTro4.chr3                 125234829 2 - 202329955 gg
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159876766 2 - 202140232 ga
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27569115 2 -  28733288 ga
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19710384 2000 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122274544 2915 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1000.000000
s hg38.chr14_KI270722v1_random    160247 1 +    194050 g
s panTro4.chr3                 125234831 1 - 202329955 g
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19712384 1 -  19803153 G
i panPan1.JH650580             I 2000 I 914
s ponAbe2.chr3                 159876768 1 - 202140232 g
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27569117 1 -  28733288 g
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122274544 2915 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=439463.000000
s hg38.chr14_KI270722v1_random    160248 855 +    194050  
s panTro4.chr3                 125234832 912 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159876769 873 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27569118 870 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19712385 914 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122274544 2915 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=546.000000
s hg38.chr14_KI270722v1_random    161103 1 +    194050 t
s panTro4.chr3                 125235744 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19713299 1 -  19803153 t
i panPan1.JH650580             I 914 I 2647
s nomLeu3.chr24                 27569988 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159877642 0 - 202140232 C
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122274544 2915 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1012408.000000
s hg38.chr14_KI270722v1_random    161104 1997 +    194050  
s panTro4.chr3                 125235745 1993 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159877642 1984 - 202140232  
i ponAbe2.chr3                 C 0 I 1
s nomLeu3.chr24                 27569989 2014 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19713300 2647 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e gorGor3.chr3                 122274544 2915 - 199944510 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-96.000000
s hg38.chr14_KI270722v1_random    163101 1 +    194050 a
s panTro4.chr3                 125237738 1 - 202329955 t
i panTro4.chr3                 C 0 C 0
s gorGor3.chr3                 122277459 1 - 199944510 t
i gorGor3.chr3                 I 2915 N 0
s nomLeu3.chr24                 27572003 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
e ponAbe2.chr3                 159879626 1 - 202140232 I
e panPan1.JH650580              19713300 2647 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=310012.000000
s hg38.chr14_KI270722v1_random    163102 648 +    194050  
s panTro4.chr3                 125237739 657 - 202329955  
i panTro4.chr3                 C 0 C 0
s ponAbe2.chr3                 159879627 636 - 202140232  
i ponAbe2.chr3                 I 1 C 0
s nomLeu3.chr24                 27572004 640 -  28733288  
i nomLeu3.chr24                C 0 C 0
e panPan1.JH650580              19713300 2647 -  19803153 I
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=1910.000000
s hg38.chr14_KI270722v1_random    163750 2 +    194050 ac
s panTro4.chr3                 125238396 2 - 202329955 ac
i panTro4.chr3                 C 0 C 0
s panPan1.JH650580              19715947 2 -  19803153 ac
i panPan1.JH650580             I 2647 N 0
s ponAbe2.chr3                 159880263 2 - 202140232 ac
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27572644 2 -  28733288 ac
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=102302.000000
s hg38.chr14_KI270722v1_random    163752 203 +    194050 ctctcccctccctctgttgcccctgctctcaccacgtgttgtgcctgctcccacatcaaattctgccatgaataaatgtttcctgaggctctcaccagaagcagatgccagaaccatgcatcccataagacctgtagagccatgagccaattaaacctctttcctttataaacaactcagcctcagatatttctttacagcaa
s panTro4.chr3                 125238398 203 - 202329955 ttctcccctccctctgttgcccctgctctcaccatgtaatgtgcctgctgccacgtcaaattctgccgtgaataaatgtttcctgaggctctcaccagaagcagatgccagaaccatgcatcctacaaggcctgtagaaccatgagacaattaaacctctttcatttataaataactcagcctcaggtatttctttacagcaa
i panTro4.chr3                 C 0 N 0
s ponAbe2.chr3                 159880265 203 - 202140232 ctctcccttccctctgttgcccctgctctcaccatgtgatgtgcctgctcccacatcaaattctgccatgaataaatgtttcctgaggctctcaccagaagcagatgccagaaccatgcatcctgtaaggcctgtagaaccatgagccaattaaacctctttcctttgtaaataactcagcctcaggtatttctttacagcaa
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27572646 203 -  28733288 ctctcccctccctctgttgcccctgctctcaccatgtgatgtgcctgctcccatgtcaaattctaccacacgtaaaagtttcctgatgctctcaccagaagcagatcccagaaccatgcatcctgtaaggcctgtagaaccatgagccaattaaacctctttgctttataaataactcagcctcaggtatttctttacagcag
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=237734.000000
s hg38.chr14_KI270722v1_random    163955 942 +    194050  
s ponAbe2.chr3                 159880468 942 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27572849 929 -  28733288  
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873530              33263183 2581 -  36342412 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=-1107.000000
s hg38.chr14_KI270722v1_random    164897 1 +    194050 -A
s ponAbe2.chr3                 159881410 1 - 202140232 -A
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27573778 1 -  28733288 -A
i nomLeu3.chr24                C 0 C 0
s otoGar3.GL873594               6867979 1 -   9725254 C-
i otoGar3.GL873594             I 2581 n 2581
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=57346.000000
s hg38.chr14_KI270722v1_random    164898 227 +    194050 AATGAGGTAACCATTCAAAA-GTTTATTCATGATTGAAGAGGGGCTGGGATACCCCTTTCTTCTTTGGGGACATGCTTTTCATTAGCCCTAATCTCATAATCCACATAGGAGCTCCTT----CTAAAGATTTTTCTTTCTTTACCACTTTCTTCACTGCTGCTTGAAGGGCAACCCCAGATGCAGGTTGAGCCAATAGTAGCAGCCAAAGTCTGTAAGAACTGGGGTGTACA
s ponAbe2.chr3                 159881411 231 - 202140232 AATGAGGTAACCATTCAAAA-GTTTATTCATGATTGAATAGGGGCTGGGATACCCCTTTCTTGTTTGGGGACAAACTTTTCATTAGCCCTAATCTCATAATGTACATAGGAGCTCCTTTCTTCTAAAGTTTTTTCTTTCTTTACCACTTTCTTCACTGCTGCTTGAAGGGCAACCCGAGATGCAGGTTGAGCCAATGGTGGCAGCCAGAGTCTGTAAGAACTGGGGTGCACT
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27573779 232 -  28733288 AATGAGGTAACCATTCAAAATGTTTATCCATGATTGAAGAGGGGCTGGGATACCGCTTTCTTCTTTGGGGACATGCTTTTCATTAGCCCTAATCTCATAATCCACATGGGAGCTCCTTTCTTCTAAAGTTTTTTCTTTCTTTACCACTTTCTTCACTGCTGCTTGAAGGGCAACCCCAGATGCAGGTTGAGCCAATAGTGGCAGCCAGAGTCTGTAAGAACCGGGGTGCACT
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=15716.000000
s hg38.chr14_KI270722v1_random       165125  62 +    194050 GTAAGAA---------------------------CTGGGGTGCACAGTAAGAACTGGGGT-------------------------------------------------------------------------------------------TGGGGTGCACTGTAAGAACTGGGGTGCAT
s ponAbe2.chr3                    159881642 102 - 202140232 GTAAGAAAGAACTGAGGTGTACTGTAAGAAAGAACTGGGGTGCACAGTACAAACTGGGGT------------------------------------------------------------------------------GCACTGTAAGAACTGGGGTGCACTGTAAGAACTGGGGTGCAC
i ponAbe2.chr3                    C 0 C 0
s nomLeu3.chr24                    27574011 176 -  28733288 GTAAGAA----TTGGGTTGTGCTGTAAGAAAGAACTGGGGTGCACGGTAAGAACTGGGGTGCACTGTAAGAAAGGAGTTGTGCTATAAGAAAGAACTGGGGTACACAGTAGAAACGGGTGCACTGTAAGAACTGGGGTGCACTGTAAGAACTGGGGTGCACAGTAAGAACTGGGGTGCAC
i nomLeu3.chr24                   C 0 C 0
s tupBel1.scaffold_140521.1-96287     81136  75 +     96287 GTAAAAA---------------------------TTGGGGTACATAGTAACAATTGGGGT------------------------------------------------------------------------------ACATAGTAACAATTGGGATATATAGTAACAATTGGGGTACAT
i tupBel1.scaffold_140521.1-96287 N 0 N 0
e otoGar3.GL873594                  6867980 2581 -   9725254 I
e papAnu2.JH684932                   224201 32782 -    231459 T
e macFas5.chr5_KE145639_random        67704 42074 +     87690 T
e rheMac3.chr1                    225552600 48863 - 229590362 T

a score=50595.000000
s hg38.chr14_KI270722v1_random    165187 197 +    194050 TCCCACCACCATTACCAGTGCTTTCACACCCTCCTATGGGATGCAGTACCCATGGCAGAGGAGCACTCTGAACAGAGCTGTGGGTTACGAGGCTGCATCTGCAGTCCACACTCTTAACAAACCACGAGATCAGCACTAACTCCCTAAAGTAGGCTGGGAACACAGATCGTCCTCCTTCACGCAGCTCTGGGAAGCTC
s ponAbe2.chr3                 159881744 197 - 202140232 TCCCACCACCATTACCAGTGCTTTCACACCCTCCCATGGGATGCAGTACCCGTGGCAGAGGAGCACTCTGAACCGAGCTGTGGCTTATGGGGCTGCATCTGCAGTCCACACTCTTACCAAACCACGAGATCAGCATTAACTCCGTAAAGCAGGCTGGGAACACAGATGTTCCTCCTTCACGCAGCTCTGGGAAGCTC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27574187 197 -  28733288 TCCCACCACCATTACCAGTGCTTTCACACCCTCCCATGGGATGCAATAGCCACGGCAGAGGAGCACTCTGAACAGAGCTGTGGGTTACGAGGCTGCATTTGCAGTCCACACTCTCACCAAACCACGAGATCAGCGCTAACTCCCTAAAGCAGGCTGGGAACACAGATCTTCCTTCTTCACGCAGCTCTGGGAAGCTC
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=546.000000
s hg38.chr14_KI270722v1_random    165384 1 +    194050 T
s panPan1.JH650451               7679081 1 -  10938248 T
i panPan1.JH650451             N 0 N 0
s ponAbe2.chr3                 159881941 1 - 202140232 T
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27574384 1 -  28733288 T
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=47338.000000
s hg38.chr14_KI270722v1_random    165385 185 +    194050 AACTTCTTGCTGCACTTAAGATAAATTTTCatgcagcaatcccactaccaggaatttatcaaaaggaaaTATTTGGAATGCACACAGATGCATGCATTTATTCATCTGTAATTATCTGGATGCCTATCGGTAAGAAATTAATTATTTAAATTCATTCACATACATTCAAATGACAACTCCACAAA
s ponAbe2.chr3                 159881942 185 - 202140232 AACTTCTTGTTGCACTTAAGATAAATtttcatgcagcaatcccactatcaggaatttatcaaaaggaaatatttggaatgcacacagatgcatgcagttattcatctgtaattatctgGATGTCTATTGGTAAGAAATTAATTATTTAAATTCATTCACATACATTCAAATGACAACTCCACAAC
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27574385 184 -  28733288 AACGTCTTGTTGCACTTAAGATAAATtttcatgcagcaaccccactaccaggaatttatcaaaaggaaatatttggaatgca-acagatgcatgcagttattcatctgtaattatctgGATGTCCATCAGTAAGAAATAAATTATTTAAATTCATTCACATACATTCAGATGACAACTCCACAAC
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=138139.000000
s hg38.chr14_KI270722v1_random    165570 359 +    194050 CTTTAGG------------------------------------------------------GTATAAAAATGGAT-TTCAAGGATCTTCTTTCTCAGAGAGGcagtgtagagtgatggctaagaattccagctggggagcaagctcacctggactca---catctgagctcta-tacttactgtctgtgtggcctt-gggtaaattatcaagggctctgagccccacattccccatctgtaaaacggatctctaggaagattaaatgggttttaatgtaaagtgcccaggacacagtgtacttgggacatagcaagaattcaatgaaAATTACTCAGTATTGATGACATGTCCTTAAATGAGTAAAATATGTTATGAAACCACATGTAGATGATGATCATATTTTTGTTTCCTGtgtga
s ponAbe2.chr3                 159882127 358 - 202140232 CTTTAGA--------------------------------------------------------ATAAAAATGGAT-TTCAAGGATCTTCTCTCTcagagaggcagtgtagagcgatggctgacagttccagctggggagcaagctcacctggactca---catctgagctcta-tacttactgtctgtgtagccttggggtaaattatccagggctctgagccccacatcccccatctgtaaaacggatttttaggaagactaaatggattttaatgtaaagtgcccaggacacagtgtacttgggacatagcaagaattcaatgaaAATTAGTCAGTATTGATGACTTGTCCTTAAATGAGTAAAACATGTTATGAAACCACATGTAGATGATGATCATATTTTTGTTTCCTGtgtga
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27574569 413 -  28733288 CTTTAGGAGAATAAAAATGGATTTCAAGGATCTTCTGCTCAGAGAGGCAGTGTAGAGTGATGGCTAAAAATGGAT-TTCAAGGATCTTCTGTCTcagagaggcagtgtagggtgatggcctagagttccagctggggagcaagctcacctggactca---catctgagctcta-tacttactgtctgtgtggcctt-gggtaaattatcaagggctctgagccccacatcccccatctgtacaatggatttttaggaagattaaatgggttttaatgtaaagtgctcaggacacagtgtacttgggacatagcaagaattcaatgaaAATTAGTCAGTATTGATGACATATCCTTAAATGAGTAAAACATGTTATGAAACCTCATGTAGATGATGATCATATTTTTGTTTCCTAtgtgg
i nomLeu3.chr24                C 0 C 0
s micMur1.scaffold_18511           10466 358 +     43889 CTTAAGG------------------------------------------------------GGATAAACATGGATCTTGAAAGACCCTCTCTTTTAGAGAGGcagtgtaggatggtagcttacagttttggctgtggagcaagatcacctggaatcagctcagaggagccctattacttgctatctgcatggccct-gggtaaattatgaagagctctgggctccat-ttattcattagtaaagtgggttgctgtgaggattaaatgag--ttaatgtaaagtgcacaggacatggagtgcttggaccatggcaagaactcaatgaaAAGTAAT---TACTTATGTTGTATCCTTAAATGAGTAAAGCATGTTATGGGAGTGTCTGTAGATGATGATCCTATTTTTGCTTCCTACATAA
i micMur1.scaffold_18511       N 0 N 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=146155.000000
s hg38.chr14_KI270722v1_random    165929 594 +    194050  
s ponAbe2.chr3                 159882485 598 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27574982 596 -  28733288  
i nomLeu3.chr24                C 0 C 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T
e macFas5.chr5_KE145639_random     67704 42074 +     87690 T
e rheMac3.chr1                 225552600 48863 - 229590362 T

a score=119819.000000
s hg38.chr14_KI270722v1_random    166523 141 +    194050 gaagaccaagcttttatcatgcagattaagccatcaggtcgcaggcctcagagaaaatatattgtaaatgtttcttattacacttgaggtctgtattgatgttaatgctggaggggtaaaatgaggcatctccaaccccct
s ponAbe2.chr3                 159883083 141 - 202140232 gaagaccaaggttttttcatgcagatgaagccaccaggtcgcaggcctcagagaaaatagattgtaaatatttcctattacacttgaggtctgtattgatgttaatgctggagggctacaatgaggcatctccaaccccct
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27575578 141 -  28733288 gaagaccaaggttttatcatgcagatgaagccaccaggtcacaggcttcagagaaaatagattgtaaatgtttcttattacacttgaggtctgtattgatgttaatgctggaggggtacagtgaggcatctccaaccccct
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225503737 141 - 229590362 gaagaccaaggttttatcatgcagatgaagccactgggtctcaggcctcagagaaaacagattgtaaatgtttcttgttacgcttgaggtctgtgttgatgttaatgctggaggggtataatgaggcatctccaaccccct
i rheMac3.chr1                 T 48863 C 0
s macFas5.chr5_KE145639_random     25630 141 +     87690 gaagaccaaggttttatcatgcagatgaagccactgggtctcaggcctcagagaaaacagattgtaaatgtttcttgttacacttgaggtctgtgttgatgttaatgctggaggggtataatgaggcatctccaaccccct
i macFas5.chr5_KE145639_random T 42074 C 0
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=1500.000000
s hg38.chr14_KI270722v1_random    166664 1 +    194050 c
s ponAbe2.chr3                 159883224 1 - 202140232 c
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27575719 1 -  28733288 c
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225503878 1 - 229590362 c
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     25771 1 +     87690 c
i macFas5.chr5_KE145639_random C 0 C 0
s rhiRox1.KN297764v1              416089 1 -    492427 c
i rhiRox1.KN297764v1           N 0 I 307
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=245801.000000
s hg38.chr14_KI270722v1_random    166665 307 +    194050 tttcatcattgcctgaactagagtttcaggataactccagaatggcctcaaccaagaggaggggtccattcagatggctactgggggggccttagaatttcacttttggttaacaCTGtcccccttctggtcaagtcagtggccacccaatttttattttgtcctgtagtgttgccagggtggcatagctgcctatttcatgtccatcctatttttatagcctgtgagtttcaggtgattacctaagaaccttaaga-tacatggttattttaccaataattcaagattcagcaattttcattaaacc
s ponAbe2.chr3                 159883225 306 - 202140232 tttcatcatggcctgaactagagtttcaggttaactccggaatggcctcggccaagaggaggggtccattcagatggctgct-ggggggccttagaattccactttgggttaacaCTGCTctccttctggccaagtcagtggccacccaatttttattttgtcctgtagtgttgccagggtggcgtagctgcctacttcacatccaccctatttttatggcctgcgagtttcaggtgattacctaagaaccttaaga-tacattgttattttaccaataattcaaaatttagctgttttcattaaacg
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27575720 306 -  28733288 tttcatcatggcctgaactagagtttcaggttaactccggaatggcctcggccaagagggggggtccattcagatggctgct-ggggggccttagaattccacttttggttaacaTTGCcctccttctggccaagtcagtggccacccaatttttattttgtcctgtagtgttgccagggtggcatggctgtctgcctcacattcatcctatttttatagcctgtgagtttcaggtgattacctaagaacattaaga-tacatggttattttaccaataattcaagatttagctgttttcattaaacc
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225503879 307 - 229590362 tttcatcatgccctgaactagagcttcaggttacctctggaaagcccttggccaagaggaggggtccattcagatggttgtt-ggggggccttagaattccacttttggttaacaCtctcccccttctggtcaagtcagcagccacccaatttttattttgtcctgtagtgttgccagggtggcatagctgcctgcctcacatccatcctatttttatagcctgtgaatttcaggtgattacttaagaacctgaagagtatatggttattttaccaataattcaagatttacctgttttcattatacc
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     25772 308 +     87690 tttcatcatgccctgaactagagcttcaggttacctctggaaggcccttggccaagaggaggggtccattcagatggttgttgggggggccttagaattccacttttggttaacaCTCTACCCCTTCGGGTCAAGtcagcagccacccaatttttattttgtcctgtagtgttgccagggtggcatagctgcctacctcacatccatcctatttttatagcctgtgaatttcaggtgattacttaagaaccttaagagtatatggttattttaccaataattcaagatttacctgttttcattatacc
i macFas5.chr5_KE145639_random C 0 C 0
e rhiRox1.KN297764v1              416090 307 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=1500.000000
s hg38.chr14_KI270722v1_random    166972 1 +    194050 c
s ponAbe2.chr3                 159883531 1 - 202140232 c
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27576026 1 -  28733288 c
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225504186 1 - 229590362 c
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     26080 1 +     87690 c
i macFas5.chr5_KE145639_random C 0 C 0
s rhiRox1.KN297764v1              416397 1 -    492427 c
i rhiRox1.KN297764v1           I 307 I 524
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=391451.000000
s hg38.chr14_KI270722v1_random    166973 519 +    194050  
s ponAbe2.chr3                 159883532 518 - 202140232  
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27576027 515 -  28733288  
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225504187 504 - 229590362  
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     26081 502 +     87690  
i macFas5.chr5_KE145639_random C 0 C 0
e rhiRox1.KN297764v1              416398 524 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=1365.000000
s hg38.chr14_KI270722v1_random    167492 1 +    194050 t
s ponAbe2.chr3                 159884050 1 - 202140232 t
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27576542 1 -  28733288 t
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225504691 1 - 229590362 t
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     26583 1 +     87690 t
i macFas5.chr5_KE145639_random C 0 C 0
s rhiRox1.KN297764v1              416922 1 -    492427 t
i rhiRox1.KN297764v1           I 524 I 487
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=364166.000000
s hg38.chr14_KI270722v1_random    167493 462 +    194050 gtgatcaaaaacacataacaaaatacgtgcacatacacataaacacacacatacacactcgtac-aaacaaagatcctgtagcttttgcttcagaaccctagccatgagatattgatacagacatttaggtttgcaaaacaataacaaaaataattggatgcaaacagtggactttatcttagtgaacaaatCTGTACTGCAAAGCCCCTCATCTCAGTAATTGGGTGTC-GTGTGAAGGGCACAGAGAGCCTGGTTCAGTGTCACCGGGGTAACCACAGCTCCAGATGCCACCTGAAATGTCCCAGGGCTGAAATTGCCAATCTCTTCTGGCCAAAGCTGTGCTCCTAGACCTGTTGGGGACCCAAGAGCCAACACTTGCAAGGATTCCAGGCCATGCATTTCTTGCCTGGGCCCACGTCTGAGGCCTGACTTAGGGTCCTGGGTGGATCTGACCTGGGGGTC
s ponAbe2.chr3                 159884051 449 - 202140232 gtggtcaaaaaca--------------tgtacatacacataaacacacacatacacactcgtac-aaacaaagatcctgtagcttttgcttcagaactctagccatgagacattgatacagacttttaggtttgcaaaacaataacaaaaataactggatgcaaacagtggactttatgttagtgaacaaatCTTTACTGCAAAGCCCCTCATCTCAGTCATTGTGTGTCTGTGTGAAGGGCACAGCGTGCCTGGTTCTGTGTCACCGGGGTGGCCACAGCTGCAGATGCCACCTGAAATGTTGCAGGGCTGAAATTGCCCATCTCTTCTGGCCAAAGCTGTGCTCCTAGGTCTGTTGGGGACCCAGGTGCCAACCCTGGCAAGGACCCCAGGCCATGCACCTCTtgcctgggcccacgtctgaggcctgacttagggtcctgggtgggtctgacctgggggtc
i ponAbe2.chr3                 C 0 I 41
s nomLeu3.chr24                 27576543 461 -  28733288 gtgatgaaaaacacgtaacaaagtacatgtacatacacataaacacacacatacacactcatac-agacaaagatcctgtagcttttgcttcagaactctagccatgagatattg--acagacttttaggtttgcaaaacaataacaaaaataattggatgcaaacagtggactttaccttagtgaataaatctttactgcaaagcccctcatctcagtaattgggtgtctgtgtgaagggcccagcgagcctgATTCAGTGTCACCGGGGTGGCCACAGCTGCAGATGCCACCTGAAATATCCCAGGGCTGAAATTGCCAATCTCTTCTGGCCAAAGCTGTGCTCCTAGGCCTGTTGGGGACCTAGGTGCCAACCCTTGCAAGGACCCCAGGCCATGCGCCTCTTGCCTGGGCCCACGTCTGAGGCCTGACTTAGCGTCCTGTGTGGGTCTGACCTGGGCGTC
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225504692 458 - 229590362 gtgatcataaacatgtaacaaaatacatgtacatacacat----acacacatacacactcatacaaaacaaagatcctgtagattttccttcagaa--ctagccatgagatgttgatacagactcttgggtttgcaaaacaataacaaaaataattggacgcaaacagtggattttatcttcgtgaataaatCTTTACCACAAAGCCCCTTATCTCAGTAACTGGGTGTCTGTGTGAAGGGCACAGCGAGCCTGGTTCAGTGTCATTGGGGTGGCCACAGTTGCAGATGCCACCTGAAATGTCCCAGGCCTGAAACTGCCAATCTCTTCTGGCCAAAGCTGTGCTCCTAGGCCTGTTGGGGACCCGGGTGCCAATGCTTGCAGGGACCCCAGGCCATGCACCTCTTGCCTGGGCCCACATCTGAGGCCTGACTTAGGGTCCTGGGTGGGTCTGACCTGGGAGTC
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     26584 458 +     87690 gtgatcataaacatgtaacaaaatacatgtacatacacat----acacacatacacactcatacaaaacaaagatcctgtagattttccttcagaa--ctagccatgagatattgatacagactcttgggtttgcaaaacaataacaaaaataattggacgcaaacagtggattttatcttcgtgaataaatCTTTACCACAAAGCCCCTTATCTCAGTAACTGGGTGTCTGTGTGAAGGGCACAGCGAGCCTGGTTCAGTGTCATTGGGGTGGCCACAGTTGCAGATGCCACCTGAAATGTCCCAGACCTGAAACTGCCAATCTCTTCTGGCCAAAGCTGTGCTCCTAGGCCTGTTGGGGACCCGGGTGCCAATGCTTGCAGGGACCCCAGGCCATGCACCTCTTGCCTGGGCCCACATCTGAGGCCTGACTTAGGGTCCCGGGTGGGTCTGACCTGGGAGTC
i macFas5.chr5_KE145639_random C 0 C 0
e rhiRox1.KN297764v1              416923 487 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=6735.000000
s hg38.chr14_KI270722v1_random    167955 25 +    194050 CTTAAACCGCCCCATTGA-----------ttttttt-----
s nomLeu3.chr24                 27577004 28 -  28733288 CTTAAAACACCCCTTGGGA--------ttttttttt-----
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225505150 33 - 229590362 CTTAAAACACCCCATGGAA--------tttttttttttttt
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27042 41 +     87690 CTTAAAACACCCCATGGAAtttttttttttttttttttttt
i macFas5.chr5_KE145639_random C 0 C 0
e rhiRox1.KN297764v1              416923 487 -    492427 I
e ponAbe2.chr3                 159884500 41 - 202140232 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=3640.000000
s hg38.chr14_KI270722v1_random    167980 4 +    194050 tttt
s nomLeu3.chr24                 27577032 4 -  28733288 tttt
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225505183 4 - 229590362 tttt
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27083 4 +     87690 tttt
i macFas5.chr5_KE145639_random C 0 C 0
s rhiRox1.KN297764v1              417410 4 -    492427 tttt
i rhiRox1.KN297764v1           I 487 I 1260
e ponAbe2.chr3                 159884500 41 - 202140232 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=34294.000000
s hg38.chr14_KI270722v1_random    167984 82 +    194050 cagatggggtcttgctctgtcaccaggctggagtaaagtggcgcaatctcagcttactgcaacctctgcttcccaggttcaa
s nomLeu3.chr24                 27577036 82 -  28733288 gagatggagtctcgctctgtcaccaggctggagtacagtggtgcgatctcagctcactgcaacctccacctcctgggttcaa
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225505187 80 - 229590362 gagatggagtctcactctgtcaacaggctggagtgcaatggcacgatctcggttcactgaaacct--gtctcccaggttcaa
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27087 80 +     87690 gagatggagtctcactctgtcaacaggctggagtgcaatggcacgatctcggttcactgaaacct--gtctcccaggttcaa
i macFas5.chr5_KE145639_random C 0 C 0
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e ponAbe2.chr3                 159884500 41 - 202140232 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e papAnu2.JH684932                224201 32782 -    231459 T

a score=25858.000000
s hg38.chr14_KI270722v1_random    168066 37 +    194050 gcgattctcctgcctcagcctcctgagtagctgggac
s nomLeu3.chr24                 27577118 37 -  28733288 gcgattctcctgcctcagcctcctgagtagctgggac
i nomLeu3.chr24                C 0 I 133
s rheMac3.chr1                 225505267 37 - 229590362 gtgattttcctgcctcagcctcctgagtagctgggac
i rheMac3.chr1                 C 0 I 136
s macFas5.chr5_KE145639_random     27167 37 +     87690 gtgattttcctgcctcagcctcctgagtagctgggac
i macFas5.chr5_KE145639_random C 0 I 133
s papAnu2.JH684932                191419 37 -    231459 gtgatctgccctccttggcatcccaaagtgctgggat
i papAnu2.JH684932             T 32782 C 0
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e ponAbe2.chr3                 159884500 41 - 202140232 I
e otoGar3.GL873594               6867980 2581 -   9725254 I

a score=84827.000000
s hg38.chr14_KI270722v1_random    168103 110 +    194050 tacaggtgtgaaccaTGGTGCCAATCCAACACCCTATGGAATTTTTAACATGCTTGGTGAGAGGAAATGGT--------------------------------------------------------ACTGGGAACCCATGGACCTGCACACAGGGGGTGCCTCCT
s nomLeu3.chr24                 27577288 110 -  28733288 tacaggtgtgaaccatggcaccAGTCCAACACCCCACGGAATTTTTAACATGCTTGGTGAGAGGCAGTCGT--------------------------------------------------------ACTGGGAACCCATGGACCTGCACACAGAGGGTGCCTCCT
i nomLeu3.chr24                I 133 C 0
s rheMac3.chr1                 225505440 164 - 229590362 tacaggtgtgaaccatggcaccAGTCCAACACCCCATGGAATTTTTAACATGCTTGGTGAGAGGCAATGGTACTGGGAACCCGTGGAGCCGCACACAGGGGGTGCCTCCTGTGGCAGCACCCGGGGCACTGGGAACTCGTGGAGCTGCACAC--GGGGTGCCTCCT
i rheMac3.chr1                 I 136 C 0
s macFas5.chr5_KE145639_random     27337 108 +     87690 tacaggtgtgaaccatggcaccAGTCCAACACCCCATGGAATTTTTAACATGCTTGGTGAGAGGCAATGGT--------------------------------------------------------ACTGGGAACTCGTGGAGCTGCACAC--GGGGTGCCTCCT
i macFas5.chr5_KE145639_random I 133 C 0
s papAnu2.JH684932                191456 110 -    231459 tacaggtgtgaaccatggcACCAGTCCAACACCCCATGGAATTTTTAACATGCTTGGTGAGAGGCAATGGT--------------------------------------------------------ACTGGGAACCCGTGGAGCTGCACACAGGGGGTGCCTCCT
i papAnu2.JH684932             C 0 C 0
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e ponAbe2.chr3                 159884500  41 - 202140232 I
e otoGar3.GL873594               6867980 2581 -   9725254 I

a score=89274.000000
s hg38.chr14_KI270722v1_random    168213 84 +    194050 GTGGCAGTACCCGGCACCCTGCTGCCACCAGGAGACCCCTGGCCTGTCCTGCTGGCTGCCGGCTTATACTCCTCCATCATCAAC
s ponAbe2.chr3                 159884541 84 - 202140232 GTGGTAGTACCTGGGGCCCTGCTGCCACCAGGAGACCTCTGTCCTGTCCTGCTGACTGCCAGCTTGTGCTCCTCCACCACCACC
i ponAbe2.chr3                 I 41 C 0
s nomLeu3.chr24                 27577398 84 -  28733288 GTGGTAGTACCTGGGGCCCTGCTGCCGCCAGGAGACCCCTGGCCTGTCCTGCTGGCTGCCAGCTTGTGCTCCTCCACCACCACC
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225505604 80 - 229590362 GTGGCAGCACCCGGGGCCCTGCTGCTGCCAGGAGACC-CTGGCCTGTCCTGCTGGCTGCCAGCCTGTGTTCCACCACCGCT---
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27445 80 +     87690 GTGGCAGCACCCAGGGCCCTGCTGCTGCCAGGAGACC-CTGGCCTGTCCTGCTGGCTGCCAGCCTGTGTTCCACCACCGCT---
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                191566 80 -    231459 GTGGCAGCACCCGGGGCCctgctgctgccaggagacc-ctggcctgtcctgctggctgccagcctgtgctccaccactgct---
i papAnu2.JH684932             C 0 C 0
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I

a score=227371.000000
s hg38.chr14_KI270722v1_random    168297 124 +    194050 GCCTCAGGTCCTCCCAGTCATTTCCA-GTCCTCAGGGTTGCTCCTCCTTGGTCTCCTCCAGCCCTCAGCTCAGTGCTGCCCCTCCAACCTCACTGAGACCCTTGGTGGTTCTCTTCCATCCTCAG
s ponAbe2.chr3                 159884625 124 - 202140232 GCCTCTGGTCCTCCCAGTCATTTCCA-GTCCTCCGGGTTGCTCCTCCTCAGTCTCCTCAAGCCCTCAACTCAGTGCTGCCCCTCCGACCTCACTGAGACCCTTGGTGGTTCCCTTCCATCCTCAG
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27577482 124 -  28733288 GCCTCTGGTCCTCCCACTCATTTCCA-GTCCTCAGGGTTGCTCCTTCTTGGTCTCCTGAAACCCTCAGCTCAGTGCTGCCCCTCCAACCTCACTGAGACCCTTGGTGGTTCCCTTCCATCCTCAG
i nomLeu3.chr24                C 0 C 0
s rheMac3.chr1                 225505684 125 - 229590362 GCCTCTGGTCCTCCCAGTCATTTCCAGGTCCTCAGGGTTGCTCCTCCTCGGCCTCCTCAAGCCCTCAGCTCAGTGCTGCCCCTCCAACCTCACTGAGACCCTTGGTGGTTCCCTTCCATCCACAG
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27525 125 +     87690 GCCTCTGGTCCTCCCAGTCATTTCCAAGTCCTCAGGGTTGCTCCTCCTCGGTCTCCTCAAGCCCTCAGCTCAGTGCTGCCCCTCCAACCTCACTGAGACCCTTGGTGGTTCCCTTCCATCCACAG
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                191646 125 -    231459 gcCTCTGGTCCTCCCAGTCATTTCCAGGTCCTCAGGGTTGCTCCTCCTCGGTCTCCTCAAGCTCTCAGCTCAGTGCTGCCCCTCCAACCTCACTGAGACCCTTGGTGGTTCCCTTCCATCCACAG
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130534121 125 + 130588469 GCCTCTGGTCCTCCCAGTCATTTCCAGGTCCTCAGGGTTGCTCCTCCTCGATCTCCTCAAGCCCTCAGCTCGGTGCTGCCCCTCCAACCTCACTGAGACCCTTGGTGGTTCCCTTTCATCCACAG
i chlSab2.chr20                N 0 C 0
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I

a score=154401.000000
s hg38.chr14_KI270722v1_random    168421 68 +    194050 CTCCCTCACAGACCCTGGGTAGTATCCAGCCACACTCAGCTCTCTCTCCTGGATGCTCTGTCCTTTCA
s ponAbe2.chr3                 159884749 68 - 202140232 CTCCCTCATAGACCCTGGGTAGTATCCAGCCACACTCAGCTCTCTCTCCTGGATGCTCTGTCCTCCCA
i ponAbe2.chr3                 C 0 C 0
s nomLeu3.chr24                 27577606 68 -  28733288 CTCCCTCACAGACCCTGGGTAGTATCCAGCCACACTCAGTTCTCTCTCCTGGATGCTCTGTCCTCCCA
i nomLeu3.chr24                C 0 I 917
s rheMac3.chr1                 225505809 68 - 229590362 CTCCCTCACAGAGCCTGGGGAGTATCCAACCACACTCAGCTCTCTCTCCTAGATGCTCCGTCCTCCCA
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27650 68 +     87690 CTCCGTCACAGAGCCTGGGGAGTATCCAACCACACTCAGCTCTCTCTCCTAGATGCTCCGTCCTCCCA
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                191771 68 -    231459 CTCCCTCACAGAGCCTGGGGAGTATCCAACCACACTCAGCTCTCTCTCCTAGATGCTCCGTCCTCCCA
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130534246 68 + 130588469 CTCCCTCACAGAGCCTGGGGAGTATCCAACCACACTCAGCTCTCTCTCCTAGATGCTCCGTCCTCCCA
i chlSab2.chr20                C 0 C 0
s calJac3.chr1                 174271719 68 + 210400635 ccccCTCACACCTCCCAGGTAGTGTCCAGTCACCTTCAGTTCTCTCTCCTAGATGCTCTGTCCTCCCA
i calJac3.chr1                 N 0 C 0
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I

a score=14883.000000
s hg38.chr14_KI270722v1_random    168489 8 +    194050 TGGCCACT
s ponAbe2.chr3                 159884817 8 - 202140232 TGGCCACT
i ponAbe2.chr3                 C 0 C 0
s rheMac3.chr1                 225505877 8 - 229590362 TGGCCACT
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     27718 8 +     87690 TGGCCACT
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                191839 8 -    231459 TGGCCACT
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130534314 8 + 130588469 TGGCCACT
i chlSab2.chr20                C 0 C 0
s calJac3.chr1                 174271787 8 + 210400635 TGGGCACT
i calJac3.chr1                 C 0 I 753
e rhiRox1.KN297764v1              417414 1260 -    492427 I
e otoGar3.GL873594               6867980 2581 -   9725254 I
e nomLeu3.chr24                 27577674 917 -  28733288 I

a score=2800.000000
s hg38.chr14_KI270722v1_random        168497 1 +    194050 C
s ponAbe2.chr3                     159884825 1 - 202140232 C
i ponAbe2.chr3                     C 0 C 0
s rheMac3.chr1                     225505885 1 - 229590362 C
i rheMac3.chr1                     C 0 C 0
s macFas5.chr5_KE145639_random         27726 1 +     87690 C
i macFas5.chr5_KE145639_random     C 0 C 0
s papAnu2.JH684932                    191847 1 -    231459 C
i papAnu2.JH684932                 C 0 C 0
s chlSab2.chr20                    130534322 1 + 130588469 C
i chlSab2.chr20                    C 0 C 0
s calJac3.chr1                     174272548 1 + 210400635 C
i calJac3.chr1                     I 753 C 0
s tupBel1.scaffold_138917.1-761806    119363 1 +    761806 C
i tupBel1.scaffold_138917.1-761806 N 0 C 0
e rhiRox1.KN297764v1                  417414 1260 -    492427 I
e otoGar3.GL873594                   6867980 2581 -   9725254 I
e nomLeu3.chr24                     27577674 917 -  28733288 I

a score=3107.000000
s hg38.chr14_KI270722v1_random        168498 3 +    194050 AAT
s ponAbe2.chr3                     159884826 3 - 202140232 AAT
i ponAbe2.chr3                     C 0 C 0
s nomLeu3.chr24                     27578591 3 -  28733288 AGC
i nomLeu3.chr24                    I 917 C 0
s rheMac3.chr1                     225505886 3 - 229590362 CAT
i rheMac3.chr1                     C 0 C 0
s macFas5.chr5_KE145639_random         27727 3 +     87690 CAT
i macFas5.chr5_KE145639_random     C 0 C 0
s papAnu2.JH684932                    191848 3 -    231459 CAT
i papAnu2.JH684932                 C 0 C 0
s chlSab2.chr20                    130534323 3 + 130588469 CAT
i chlSab2.chr20                    C 0 C 0
s calJac3.chr1                     174272549 3 + 210400635 AGT
i calJac3.chr1                     C 0 C 0
s tupBel1.scaffold_138917.1-761806    119364 3 +    761806 AAT
i tupBel1.scaffold_138917.1-761806 C 0 C 0
e rhiRox1.KN297764v1                  417414 1260 -    492427 I
e otoGar3.GL873594                   6867980 2581 -   9725254 I

a score=60254.000000
s hg38.chr14_KI270722v1_random         168501 20 +    194050 ACTACAGTATTCAAGTTCTA
s panTro4.chr14_AACZ03171041_random     14004 20 -     37130 ACTACAGTCATCAAGTCCTA
i panTro4.chr14_AACZ03171041_random N 0 C 0
s ponAbe2.chr3                      159884829 20 - 202140232 ACTACAGTATTCAAGTCCTA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578594 20 -  28733288 ATTATAGTATTCAAGTCCTA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225505889 20 - 229590362 ACTACAGTATTCAGGTCCTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          27730 20 +     87690 ACTACAGTATTCAGGTCCTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     191851 20 -    231459 ACTACAGTATTCAGGTCCTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130534326 20 + 130588469 ACTACAGTATTCAGGTCCTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174272552 20 + 210400635 ACTACAGTATTCAAGTCCTA
i calJac3.chr1                      C 0 I 301
s tupBel1.scaffold_138917.1-761806     119367 20 +    761806 TCAATAATATTTGAGTCTAG
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I

a score=2152.000000
s hg38.chr14_KI270722v1_random         168521 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     14024 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159884849 1 - 202140232 T
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578614 1 -  28733288 T
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225505909 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          27750 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     191871 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130534346 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174272873 1 + 210400635 c
i calJac3.chr1                      I 301 C 0
s tupBel1.scaffold_138917.1-761806     119387 1 +    761806 T
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I

a score=5005.000000
s hg38.chr14_KI270722v1_random         168522 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     14025 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159884850 1 - 202140232 T
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578615 1 -  28733288 T
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225505910 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          27751 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     191872 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130534347 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174272874 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378166                    5413398 1 -  14149710 T
i saiBol1.JH378166                  N 0 I 203
s tupBel1.scaffold_138917.1-761806     119388 1 +    761806 T
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I

a score=22680.000000
s hg38.chr14_KI270722v1_random         168523 6 +    194050 GGTCAT
s panTro4.chr14_AACZ03171041_random     14026 6 -     37130 GGTCAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159884851 6 - 202140232 GGTCAT
i ponAbe2.chr3                      C 0 I 880
s nomLeu3.chr24                      27578616 6 -  28733288 GGTCAT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225505911 6 - 229590362 GGTCAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          27752 6 +     87690 GGTCAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     191873 6 -    231459 GGTCAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130534348 6 + 130588469 GGTCAT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174272875 6 + 210400635 GGTTAT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119389 6 +    761806 GTTCAT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I

a score=101252.000000
s hg38.chr14_KI270722v1_random         168529 35 +    194050 -AGTCTTTGTTGGGGTATGATGATCATTACGAGCCA
s panTro4.chr14_AACZ03171041_random     14032 35 -     37130 -AGTCTTTGTTGGGGCATGATGATGATTACGAGCCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885737 35 - 202140232 -AGTCTTTGTTGGGGTATGATGATGATTACAAGCCA
i ponAbe2.chr3                      I 880 C 0
s nomLeu3.chr24                      27578622 35 -  28733288 -AGTCTTTGTTGGGGTATGATGATGATTACGAACCA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225505917 35 - 229590362 -AGTCTTTGTTGGGGCATGATGATGATGAAGAGCCA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          27758 35 +     87690 -AGTCTTTGTTGGGGCATGATGATGATGAAGAGCCA
i macFas5.chr5_KE145639_random      C 0 I 418
s papAnu2.JH684932                     191879 35 -    231459 -AGTCTTTGTTGGGgcatgatgatgatgaagagcCA
i papAnu2.JH684932                  C 0 I 406
s chlSab2.chr20                     130534354 35 + 130588469 -AGTCTTTGTTGGGGCATGATGATGATGAAGAGCCA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174272881 26 + 210400635 -AGTCTTTGTTGGGGTGTGATG---------AGCCA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119395 36 +    761806 TATTATTGTCCGAAGTGTGATAATGATCGAGGACCA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I

a score=94664.000000
s hg38.chr14_KI270722v1_random         168564 28 +    194050 TAGTTCACAGTGGAGTGGCCTGATTCAA
s panTro4.chr14_AACZ03171041_random     14067 28 -     37130 TATTTCACAGTGAAGTGGCCTGATTCAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885772 28 - 202140232 TAGTTCACAGTGAAGTGGCCTGATTCAA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578657 28 -  28733288 CAGTTCACGCTGAAGTGGCCTGATTCAA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225505952 28 - 229590362 TAGTTCACGGTAAAGTGGCCTGATTCAA
i rheMac3.chr1                      C 0 I 1419
s macFas5.chr5_KE145639_random          28211 28 +     87690 TAGTTCACAGTGAAGTGGCCTGATTCAA
i macFas5.chr5_KE145639_random      I 418 C 0
s papAnu2.JH684932                     192320 28 -    231459 TAGTTCACAGTGAAGTGGCCTGATTCAA
i papAnu2.JH684932                  I 406 C 0
s chlSab2.chr20                     130534389 28 + 130588469 TAGTTCACAGTAAAGTGGCCTGATTCAA
i chlSab2.chr20                     C 0 I 1015
s calJac3.chr1                      174272907 28 + 210400635 TGGTTCACAGTTAAGTGGCTTGATTCAA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119431 28 +    761806 TAGTTCTTTGTAAAACGGACTGATTTAA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I

a score=20699.000000
s hg38.chr14_KI270722v1_random         168592 11 +    194050 AGAGGTATTCA
s panTro4.chr14_AACZ03171041_random     14095 11 -     37130 AGAGGTATTCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885800 11 - 202140232 AGAGGTATTCA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578685 11 -  28733288 AGAGGTCTTCA
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28239 11 +     87690 AGAGGTACTCA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     192348 11 -    231459 AGGGGTACTCA
i papAnu2.JH684932                  C 0 C 0
s calJac3.chr1                      174272935 11 + 210400635 AGAGTTGTTCC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119459 11 +    761806 AGAGGTATTTA
i tupBel1.scaffold_138917.1-761806  C 0 I 9
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=70684.000000
s hg38.chr14_KI270722v1_random         168603 42 +    194050 TGCTCTCAGTTGACCTGtgttttacttcatgtgtattgttat
s panTro4.chr14_AACZ03171041_random     14106 42 -     37130 TGCTTTAAGTTGGTCTGtgttttactccatttatattgttat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885811 42 - 202140232 TGCTTTCAGCTGGTCTGtgttttactccatttgtattgttat
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578696 42 -  28733288 TGCTTTCAGTTGGTCTGtgttttactccatttttattgttat
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28250 42 +     87690 TGCTTTCAGTTGGTCTGtgttttactccatttgtattgttat
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     192359 42 -    231459 TGCTTTCAGTTGGTCTGTGTTTTACTCCATTTGtattgttgt
i papAnu2.JH684932                  C 0 I 732
s calJac3.chr1                      174272946 42 + 210400635 TGTTTTCAGTTGACCTGtgttttactccatttgtgttgctat
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=33505.000000
s hg38.chr14_KI270722v1_random         168645 33 +    194050 aaataaatacttgaggctgagtaatttagaaag
s panTro4.chr14_AACZ03171041_random     14148 33 -     37130 aaataaatacctgaggctgggtaatttaaaaag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885853 33 - 202140232 aaataaatacttgaggctgggtaatttagaaag
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578738 28 -  28733288 aaataaatatttgag-----gtcatttaaaaag
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28292 33 +     87690 aaataaatacttgaggctgggtaatttagaaag
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174272988 33 + 210400635 caacaaatacgcgaggctggataatttagaaag
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   417414 1260 -    492427 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=1365.000000
s hg38.chr14_KI270722v1_random         168678 1 +    194050 a
s panTro4.chr14_AACZ03171041_random     14181 1 -     37130 a
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885886 1 - 202140232 a
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578766 1 -  28733288 a
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28325 1 +     87690 a
i macFas5.chr5_KE145639_random      C 0 C 0
s rhiRox1.KN297764v1                   418674 1 -    492427 a
i rhiRox1.KN297764v1                I 1260 I 672
e calJac3.chr1                      174273021 0 + 210400635 C
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=119270.000000
s hg38.chr14_KI270722v1_random         168679 96 +    194050 aaagaggtttatttggctcacagttctgcaggttatacaagcagcatggtgctggcatctgcttctaaggaagcctcag-gaaacttacaatcatgg
s panTro4.chr14_AACZ03171041_random     14182 96 -     37130 aaagaggtttattttgttcacagttctgcaggttatacaggcagcatggtgctggcatctacttctaaggaagcctcag-gaaacttacaatcatgg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885887 96 - 202140232 aaagaggtttatttggctcacagttctgcaggttatacaagcagcatggtgctggcatctgcttctaaggaagcctcag-gaaacttacaatcatgg
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578767 96 -  28733288 aaagaggtttatttggctcacagttctacgggttatacaagcagcatggtgctggcaactgcttctaaggaagcctcag-gaaacttacaatcatgg
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28326 96 +     87690 aaagaggtttattcggctcacagttctgcaggttatacaagcagcaaggtaccagcgtctgcttctaaggaagccttgg-gaaacttacaatcatgg
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174273021 97 + 210400635 aaagaggtttatttgtctcacaattctgcaggttatacaagcggcatggtgctggcatcggcttctaaggaggcctcagaaaaacttacaatcatgg
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   418675 672 -    492427 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413399 203 -  14149710 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=51590.000000
s hg38.chr14_KI270722v1_random         168775 36 +    194050 cagaaggccaagag---ggag-----ctggccatcacatggtga
s panTro4.chr14_AACZ03171041_random     14278 36 -     37130 cagaaggccaagag---ggag-----ctggccatcacatggtga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159885983 36 - 202140232 cagaaggccaagag---ggag-----gtggccgtcacatggtga
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578863 36 -  28733288 caggaggctaagag---ggag-----ctggccatcacatggtga
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28422 36 +     87690 cagaaggctaagat---gggg-----ctggccatcacctggtga
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174273118 36 + 210400635 cagaaggctaagag---ggaa-----ctggccatcacatggtga
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378166                    5413602 42 -  14149710 cagaaggtcaagagatcgagaccatcctggcca--acatggtga
i saiBol1.JH378166                  I 203 C 0
e rhiRox1.KN297764v1                   418675 672 -    492427 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=34484.000000
s hg38.chr14_KI270722v1_random         168811 26 +    194050 gagtgagcaagagagagactagggag
s panTro4.chr14_AACZ03171041_random     14314 26 -     37130 gagtgagcaagagagagacgagggag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886019 26 - 202140232 gagtgagcaagagagagagtagggag
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578899 26 -  28733288 gagtgagaaagagagagactagggag
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28458 26 +     87690 gagtgagcaagagagagactagggag
i macFas5.chr5_KE145639_random      C 0 C 0
s rhiRox1.KN298262v1                  2135281 23 -   3004993 gagagagtgagagtga---tagagag
i rhiRox1.KN298262v1                n 672 n 672
s calJac3.chr1                      174273154 26 + 210400635 gtgtgagcaaggcagagagtggggag
i calJac3.chr1                      C 0 C 0
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413644  0 -  14149710 C
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=9428.000000
s hg38.chr14_KI270722v1_random         168837 8 +    194050 atgcctgc
s panTro4.chr14_AACZ03171041_random     14340 8 -     37130 atgccagc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886045 8 - 202140232 atgccagc
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578925 8 -  28733288 atgccagc
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28484 8 +     87690 acgccagc
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174273180 8 + 210400635 atgtcagg
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378166                    5413644 8 -  14149710 aagcctgt
i saiBol1.JH378166                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=21973.000000
s hg38.chr14_KI270722v1_random         168845 19 +    194050 ctct-ttaaataaccagatc
s panTro4.chr14_AACZ03171041_random     14348 19 -     37130 ctct-ttaaataatcagaac
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886053 19 - 202140232 ctct-ttaaatcaccagaac
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578933 19 -  28733288 ctct-ttaagtaaccagatc
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28492 19 +     87690 ctct-ttaaataaccagatc
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174273188 19 + 210400635 ctct-ttaaacaaccagatc
i calJac3.chr1                      C 0 I 1
s saiBol1.JH378166                    5413652 20 -  14149710 ctctactaaaaatacaaaaa
i saiBol1.JH378166                  C 0 C 0
s tarSyr2.KE936210v1                   283012 16 -    653294 ctta-taaaatgaacAG---
i tarSyr2.KE936210v1                N 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=1365.000000
s hg38.chr14_KI270722v1_random         168864 1 +    194050 t
s panTro4.chr14_AACZ03171041_random     14367 1 -     37130 t
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886072 1 - 202140232 t
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578952 1 -  28733288 t
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          28511 1 +     87690 t
i macFas5.chr5_KE145639_random      C 0 I 605
s saiBol1.JH378166                    5413672 1 -  14149710 t
i saiBol1.JH378166                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e tarSyr2.KE936210v1                   283028 0 -    653294 C
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=4605.000000
s hg38.chr14_KI270722v1_random         168865 4 +    194050 tggc
s panTro4.chr14_AACZ03171041_random     14368 4 -     37130 tggc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886073 4 - 202140232 tggc
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578953 4 -  28733288 tggc
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413673 4 -  14149710 tagc
i saiBol1.JH378166                  C 0 C 0
s tarSyr2.KE936210v1                   283028 3 -    653294 -ggc
i tarSyr2.KE936210v1                C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=1282.000000
s hg38.chr14_KI270722v1_random         168869 2 +    194050 cg
s panTro4.chr14_AACZ03171041_random     14372 2 -     37130 ca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886077 2 - 202140232 cg
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578957 2 -  28733288 tg
i nomLeu3.chr24                     C 0 C 0
s nasLar1.chr6                       30102659 2 - 170588018 ca
i nasLar1.chr6                      N 0 C 0
s saiBol1.JH378166                    5413677 2 -  14149710 tg
i saiBol1.JH378166                  C 0 C 0
s tarSyr2.KE936210v1                   283031 2 -    653294 ca
i tarSyr2.KE936210v1                C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=2800.000000
s hg38.chr14_KI270722v1_random         168871 1 +    194050 g
s panTro4.chr14_AACZ03171041_random     14374 1 -     37130 g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.chr5                       32189368 1 - 165930986 g
i gorGor3.chr5                      N 0 C 0
s ponAbe2.chr3                      159886079 1 - 202140232 g
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578959 1 -  28733288 g
i nomLeu3.chr24                     C 0 C 0
s nasLar1.chr6                       30102661 1 - 170588018 g
i nasLar1.chr6                      C 0 C 0
s saiBol1.JH378166                    5413679 1 -  14149710 g
i saiBol1.JH378166                  C 0 C 0
s tarSyr2.KE936210v1                   283033 1 -    653294 g
i tarSyr2.KE936210v1                C 0 I 500
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=18521.000000
s hg38.chr14_KI270722v1_random         168872 13 +    194050 gtgcggtggctca
s panTro4.chr14_AACZ03171041_random     14375 13 -     37130 gtgcagtggctca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.chr5                       32189369 13 - 165930986 gtgcagtggctca
i gorGor3.chr5                      C 0 C 0
s ponAbe2.chr3                      159886080 13 - 202140232 gcgcggtggctca
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578960 13 -  28733288 gtgtggtggttca
i nomLeu3.chr24                     C 0 C 0
s nasLar1.chr6                       30102662 13 - 170588018 gtgcggtggctca
i nasLar1.chr6                      C 0 I 273
s saiBol1.JH378166                    5413680 13 -  14149710 aggtggtggcgcg
i saiBol1.JH378166                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=435.000000
s hg38.chr14_KI270722v1_random         168885 2 +    194050 ca
s panTro4.chr14_AACZ03171041_random     14388 2 -     37130 tt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.chr5                       32189382 2 - 165930986 cg
i gorGor3.chr5                      C 0 I 292
s ponAbe2.chr3                      159886093 2 - 202140232 ca
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578973 2 -  28733288 ca
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413693 2 -  14149710 cg
i saiBol1.JH378166                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=57927.000000
s hg38.chr14_KI270722v1_random         168887 100 +    194050 cctctaatcccagcactttgggaggccgaagcgggcggatcac----------------gaggt--caggagattgaga---------------ccatcctggctaaca--cagtgaaaccccgtctctattaaa
s panTro4.chr14_AACZ03171041_random     14390 100 -     37130 cctgtaatcccagcactttgggaggccgaggtgggtggatcac----------------gaggt--caggagattgaga---------------ccatcctggctaaca--cggtgaaaccccatgtctactaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886095 100 - 202140232 cctgcaatcccagcactttgggaggctgaggtgggcagatcac----------------gaggt--caggagatcgaga---------------ccatcctggctaaca--cagtgaaaccccgtctctattaaa
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27578975 100 -  28733288 cctgtaatcccagcactttgagaggccaaggcaggcagatcac----------------gaggt--caggagatcaaga---------------ccatcctggctaaca--cggtgaaaccccgtctgtactaaa
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413695 135 -  14149710 cctggaatcccagctgctcgggaggctgaggcaggagaatagcttgaacccaggaagcagaggttgcagcaagctgagaacacaccattgcactccagcctgggtaacaacaggtgacactccatctcgaaaaat
i saiBol1.JH378166                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207   1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470   9 +    761806 I
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873594                    6867980 2581 -   9725254 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=-1215.000000
s hg38.chr14_KI270722v1_random         168987  3 +    194050 -------aaa-----------
s panTro4.chr14_AACZ03171041_random     14490  3 -     37130 -------aaa-----------
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886195  3 - 202140232 -------aaa-----------
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579075  3 -  28733288 -------aaa-----------
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413830  3 -  14149710 -------aaa-----------
i saiBol1.JH378166                  C 0 C 0
s otoGar3.GL873608                    1955155 21 -   8296746 aaGAGTGAGACCTTATCTCTA
i otoGar3.GL873608                  n 2581 I 29
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=708.000000
s hg38.chr14_KI270722v1_random         168990 8 +    194050 caaaaaaa
s panTro4.chr14_AACZ03171041_random     14493 7 -     37130 caaaaaa-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886198 7 - 202140232 caaaaaa-
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579078 7 -  28733288 caaaaaa-
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413833 4 -  14149710 ttaa----
i saiBol1.JH378166                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955176 29 -   8296746 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=6002.000000
s hg38.chr14_KI270722v1_random         168998 18 +    194050 ttagccaggtgtggtggc
s panTro4.chr14_AACZ03171041_random     14500 18 -     37130 ttagctgggcatggtggc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886205 17 - 202140232 ttagct-gctgtggtggc
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579085 18 -  28733288 ttagccaggcatggtggt
i nomLeu3.chr24                     C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955176 29 -   8296746 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=-1660.000000
s hg38.chr14_KI270722v1_random         169016 1 +    194050 -a
s panTro4.chr14_AACZ03171041_random     14518 1 -     37130 -a
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886222 1 - 202140232 -a
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579103 1 -  28733288 -g
i nomLeu3.chr24                     C 0 C 0
s otoGar3.GL873608                    1955205 1 -   8296746 c-
i otoGar3.GL873608                  I 29 I 218
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=26090.000000
s hg38.chr14_KI270722v1_random         169017 55 +    194050 ggcgcctgtagtcccagctactcaggaggctgaggcaggaaaatggcataaaccc
s panTro4.chr14_AACZ03171041_random     14519 55 -     37130 ggtatctctagtcccagctactcgggaggctgaggcaggagaatggcataaacct
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886223 55 - 202140232 ggcgcctgtagtcccagctactcaggaggctgaggcaggagaatagcataaacca
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579104 55 -  28733288 ggcacttgtagtcccagctactctggaggctgaggcaggagaatggtgtaaaccc
i nomLeu3.chr24                     C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955206 218 -   8296746 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=187.000000
s hg38.chr14_KI270722v1_random         169072 1 +    194050 a
s panTro4.chr14_AACZ03171041_random     14574 1 -     37130 g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886278 1 - 202140232 g
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579159 1 -  28733288 a
i nomLeu3.chr24                     C 0 C 0
s otoGar3.GL873608                    1955424 1 -   8296746 a
i otoGar3.GL873608                  I 218 I 102
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=36321.000000
s hg38.chr14_KI270722v1_random         169073 77 +    194050 ggaggtggagcttgtggtgagccgagat-----tgtgccactgcactccagcctgggtgacagagtgagactccgtctcaaa
s panTro4.chr14_AACZ03171041_random     14575 78 -     37130 ggaggcagagcttgtggtgagccaagatcactctgcgccactgcactccagcctgggtgacagag----actccatctcaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886279 77 - 202140232 ggaggtggagcttgtggtgagccgagat-----cacgccactgcactccagcctgggtgacagagtgagactccgtctcaaa
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579160 77 -  28733288 ggaggtggagcttgcagtgagccgagat-----cgtgccactgcactccagcctgggtgacagagtgagactccatctcaaa
i nomLeu3.chr24                     C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e gorGor3.chr5                       32189384 292 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=4640.000000
s hg38.chr14_KI270722v1_random         169150 6 +    194050 aaaaaa
s panTro4.chr14_AACZ03171041_random     14653 6 -     37130 aaaaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.chr5                       32189676 6 - 165930986 aaaaaa
i gorGor3.chr5                      I 292 I 869
s ponAbe2.chr3                      159886356 6 - 202140232 aaaaaa
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579237 6 -  28733288 aacaaa
i nomLeu3.chr24                     C 0 I 6
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=1026.000000
s hg38.chr14_KI270722v1_random         169156 5 +    194050 aaaaa
s panTro4.chr14_AACZ03171041_random     14659 5 -     37130 aaaca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886362 2 - 202140232 ---aa
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579249 5 -  28733288 aaaaa
i nomLeu3.chr24                     I 6 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e nasLar1.chr6                       30102675 273 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=1509.000000
s hg38.chr14_KI270722v1_random         169161 3 +    194050 aaa
s panTro4.chr14_AACZ03171041_random     14664 3 -     37130 aaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886364 3 - 202140232 aaa
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579254 3 -  28733288 caa
i nomLeu3.chr24                     C 0 C 0
s nasLar1.chr6                       30102948 3 - 170588018 caa
i nasLar1.chr6                      I 273 I 343
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207 1 + 210400635 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=-676.000000
s hg38.chr14_KI270722v1_random         169164  3 +    194050 -------aaa
s panTro4.chr14_AACZ03171041_random     14667  5 -     37130 c-----aaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886367  3 - 202140232 -------aac
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579257 10 -  28733288 caacagaaaa
i nomLeu3.chr24                     C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e chlSab2.chr20                     130534417 1015 + 130588469 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=17628.000000
s hg38.chr14_KI270722v1_random         169167 23 +    194050 cagatcttatgtgaactcagagt
s panTro4.chr14_AACZ03171041_random     14672 23 -     37130 cagatcttatgtaaactcagcat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886370 23 - 202140232 cagatcttttgtgaactcagagt
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579267 23 -  28733288 cagatcttatgtgaactcagagt
i nomLeu3.chr24                     C 0 C 0
s chlSab2.chr20                     130535432 23 + 130588469 cagatgtcatgtgaactcagagt
i chlSab2.chr20                     I 1015 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e calJac3.chr1                      174273207  1 + 210400635 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=26867.000000
s hg38.chr14_KI270722v1_random         169190 22 +    194050 aagaacctgctcgtgaccatga
s panTro4.chr14_AACZ03171041_random     14695 22 -     37130 aagaacctgctcgtgaccatga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886393 22 - 202140232 aagaacctgctcgtgaccatga
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579290 22 -  28733288 aagaacctgctcatgaccatga
i nomLeu3.chr24                     C 0 C 0
s chlSab2.chr20                     130535455 22 + 130588469 aagaacctgctcctgaccatga
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273208 22 + 210400635 aagaacctgctcatttccacga
i calJac3.chr1                      I 1 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955425 102 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=46115.000000
s hg38.chr14_KI270722v1_random         169212 43 +    194050 ggacagcaccaagcattcatgagggatctgtctcca---t-------------------ttgcca-
s panTro4.chr14_AACZ03171041_random     14717 62 -     37130 ggacaacaccaagcattcatgagggatctgtcccta---tgacccgaataccaaaatacctccta-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886415 54 - 202140232 ggacagcaccaagcattcatgagggatctgtcccca---tgactcaaatac--------ctccca-
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579312 54 -  28733288 ggacagcaccaagcattcatgaaggatctgtcccca---tgacccaaatac--------ctccca-
i nomLeu3.chr24                     C 0 C 0
s chlSab2.chr20                     130535477 54 + 130588469 ggacggcagcaagcattcacaagggatctgtcccca---cgacccaaatac--------ctccca-
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273230 57 + 210400635 ggacagcaccaagcatacatgagggatctgtcaccagcgtgactcaaacac--------ctccca-
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955527 55 -   8296746 GGGCAGTATAAACAGTCCAACAGTATTTGAGTCCAA---TGAATTATACTC--------TTTGTTT
i otoGar3.GL873608                  I 102 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e papAnu2.JH684932                     192401 732 -    231459 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=1883.000000
s hg38.chr14_KI270722v1_random         169255 1 +    194050 g
s panTro4.chr14_AACZ03171041_random     14779 1 -     37130 g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886469 1 - 202140232 g
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579366 1 -  28733288 g
i nomLeu3.chr24                     C 0 C 0
s papAnu2.JH684932                     193133 1 -    231459 G
i papAnu2.JH684932                  I 732 C 0
s chlSab2.chr20                     130535531 1 + 130588469 g
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273287 1 + 210400635 g
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955582 1 -   8296746 A
i otoGar3.GL873608                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I
e macFas5.chr5_KE145639_random          28512 605 +     87690 I
e rheMac3.chr1                      225505980 1419 - 229590362 I

a score=118983.000000
s hg38.chr14_KI270722v1_random         169256 44 +    194050 tgggcccacctccaacattggaggtcacatttcaacgtgagatt
s panTro4.chr14_AACZ03171041_random     14780 44 -     37130 tgggcccacctccaacattggaggtcacatttcaatgtgatatt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886470 44 - 202140232 tgggcccacctccaacattgggggccacatttcaacgtgagatt
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579367 44 -  28733288 tgggcccacctccaacattagaggtcacatttcaaagtgagatt
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507399 44 - 229590362 Tgggcccgcctccaacgtgggaggtcacgtttcaacgggagatt
i rheMac3.chr1                      I 1419 C 0
s macFas5.chr5_KE145639_random          29117 44 +     87690 Tgggcccgcctccaacgtgggaggtcacgtttcaacgggagatt
i macFas5.chr5_KE145639_random      I 605 C 0
s papAnu2.JH684932                     193134 44 -    231459 TGGGCCCGCCTCCAACACGGGAGGTCACGTTTCAACGggagatt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535532 44 + 130588469 tgggcccgcctccaacgtgggaggtcacgtttcaacgggagatt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273288 44 + 210400635 tggacccacctctaacattggaggtcacatttcaacatgagatt
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955583 39 -   8296746 TGGTGCGAGGT----GATTAAAGATCATAGTTTGCTGTAGAAT-
i otoGar3.GL873608                  C 0 C 0
e rhiRox1.KN298262v1                  2135304 672 -   3004993 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=11091.000000
s hg38.chr14_KI270722v1_random         169300 5 +    194050 tggaa
s panTro4.chr14_AACZ03171041_random     14824 5 -     37130 tgcag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886514 5 - 202140232 tggac
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579411 5 -  28733288 tggag
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507443 5 - 229590362 tggag
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29161 5 +     87690 tggag
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193178 5 -    231459 tggag
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535576 5 + 130588469 tgggg
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   419347 4 -    492427 tgga-
i rhiRox1.KN297764v1                I 672 I 217
s calJac3.chr1                      174273332 5 + 210400635 tggag
i calJac3.chr1                      C 0 C 0
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470 9 +    761806 I
e saiBol1.JH378166                    5413837 0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955622 0 -   8296746 C
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=55706.000000
s hg38.chr14_KI270722v1_random         169305 22 +    194050 gggagaaaacatccaaagcata
s panTro4.chr14_AACZ03171041_random     14829 22 -     37130 gggaaaaaacatccaaagccta
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886519 22 - 202140232 gggagaaaacatccaaagcata
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579416 22 -  28733288 tggagaaaacatccaaagcata
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507448 22 - 229590362 gggaaaaaacatccaaagcata
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29166 22 +     87690 gggaaaaaacatccaaagcata
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193183 22 -    231459 gggaaaaaacATCCAAAGCATA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535581 22 + 130588469 gggaaaaaacatccaaagcata
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273337 22 + 210400635 ggaaaaaggcattcaagccata
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955622  5 -   8296746 -----------------GGTCG
i otoGar3.GL873608                  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tupBel1.scaffold_138917.1-761806     119470  9 +    761806 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=169758.000000
s hg38.chr14_KI270722v1_random         169327 88 +    194050 tcaGTGGGGTAACACAAGTCATAGTAACCTGGACTAAATGAAACATAAAAATCAGAAAACCTTGGAATAGTCAAGTCTAAAACTGGAC
s panTro4.chr14_AACZ03171041_random     14851 52 -     37130 tcaGTGGGGTAACACAAGTCATAGTAACCTGGACTAAATGAAACATAACAAT------------------------------------
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886541 88 - 202140232 tcaGTGGGGTAACACAAGTCATAGTAACCTGGGCTAAATGAAACATAAAAATCAGAAAACCTTGGAATAGTCAAGTCCAAAACTGGAC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579438 88 -  28733288 tcaGTGGGGTAACACAAGTCATAGTAACCTGGACTAAATGAAACATAAAAATCAGAAAACCTTGGAACAGTCAAGTCTAAAACTGGAC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507470 78 - 229590362 tcaGTGGGGTAACACAAGTCACAGTAACCGGGACTAGATGAAACATAGAAATTAGAAAACCCTGGAATAGTCAAGCTG----------
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29188 78 +     87690 tcaGTGGGGTAACACAAGTCACAGTAACCGGGACTAGATGAAACATAGAAATTAGAAAACCCTGGAATAGTCAAGCTG----------
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193205 78 -    231459 TCAGTGGGGTAACACAAGTCACAGTAACCGGGACTAGATGAAACATAGAAATTAGAAAACCCTGGAATAGTCAAGCTG----------
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535603 78 + 130588469 tcaGTGGGGTAACACAAGTCACAGTAACTGGGACTAGATGAAACATAGAAATTAGAAAACCCTGGAATAGTCAAGCTG----------
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273359 48 + 210400635 tcaGTGGGGTAACACAAGTCAGAGTAACCTGTACTAAAGGAAACATAA----------------------------------------
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955627 44 -   8296746 TTACCTAGGTAACAAAAGTCCTCATAACCTAGA------GACCCACTGGA--------------------------------------
i otoGar3.GL873608                  C 0 I 1
s tupBel1.scaffold_138917.1-761806     119479 40 +    761806 TTAGTCTAGTAACACAAGTCTTAATAACCTG--------GAAACTTAC----------------------------------------
i tupBel1.scaffold_138917.1-761806  I 9 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413837  0 -  14149710 C
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=1029.000000
s hg38.chr14_KI270722v1_random         169415 3 +    194050 TAA
s ponAbe2.chr3                      159886629 3 - 202140232 AAA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579526 3 -  28733288 TAA
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413837 3 -  14149710 taa
i saiBol1.JH378166                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119519 3 +    761806 CAG
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e calJac3.chr1                      174273407 0 + 210400635 C
e nasLar1.chr6                       30102951 343 - 170588018 I
e tarSyr2.KE936210v1                   283034 500 -    653294 I
e otoGar3.GL873608                    1955671 1 -   8296746 I
e panTro4.chr14_AACZ03171041_random     14903 0 -     37130 C
e gorGor3.chr5                       32189682 869 - 165930986 I
e chlSab2.chr20                     130535681 0 + 130588469 C
e papAnu2.JH684932                     193283 0 -    231459 C
e macFas5.chr5_KE145639_random          29266 0 +     87690 C
e rheMac3.chr1                      225507548 0 - 229590362 C

a score=-513.000000
s hg38.chr14_KI270722v1_random         169418 2 +    194050 -AT
s ponAbe2.chr3                      159886632 2 - 202140232 -AT
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579529 2 -  28733288 -AT
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413840 2 -  14149710 -at
i saiBol1.JH378166                  C 0 C 0
s tarSyr2.KE936210v1                   283534 2 -    653294 -AC
i tarSyr2.KE936210v1                I 500 I 105
s tupBel1.scaffold_138917.1-761806     119522 2 +    761806 GA-
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e calJac3.chr1                      174273407 0 + 210400635 C
e nasLar1.chr6                       30102951 343 - 170588018 I
e otoGar3.GL873608                    1955671 1 -   8296746 I
e panTro4.chr14_AACZ03171041_random     14903 0 -     37130 C
e gorGor3.chr5                       32189682 869 - 165930986 I
e chlSab2.chr20                     130535681 0 + 130588469 C
e papAnu2.JH684932                     193283 0 -    231459 C
e macFas5.chr5_KE145639_random          29266 0 +     87690 C
e rheMac3.chr1                      225507548 0 - 229590362 C

a score=2965.000000
s hg38.chr14_KI270722v1_random         169420 9 +    194050 GAAATATAA
s ponAbe2.chr3                      159886634 9 - 202140232 GAAACATAA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579531 9 -  28733288 GAAACATAA
i nomLeu3.chr24                     C 0 C 0
s saiBol1.JH378166                    5413842 7 -  14149710 aaaataa--
i saiBol1.JH378166                  C 0 I 168
s otoGar3.GL873608                    1955672 7 -   8296746 GAAAGAA--
i otoGar3.GL873608                  I 1 C 0
s tupBel1.scaffold_138917.1-761806     119524 9 +    761806 GAAATATAA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e calJac3.chr1                      174273407 0 + 210400635 C
e nasLar1.chr6                       30102951 343 - 170588018 I
e tarSyr2.KE936210v1                   283536 105 -    653294 I
e panTro4.chr14_AACZ03171041_random     14903 0 -     37130 C
e gorGor3.chr5                       32189682 869 - 165930986 I
e chlSab2.chr20                     130535681 0 + 130588469 C
e papAnu2.JH684932                     193283 0 -    231459 C
e macFas5.chr5_KE145639_random          29266 0 +     87690 C
e rheMac3.chr1                      225507548 0 - 229590362 C

a score=232758.000000
s hg38.chr14_KI270722v1_random         169429  93 +    194050 AAATTAGAAAACCTTGGAATGA-------TGCCACCTATCATTCAGGGAGACTACAAATCAGCCACATGCTGCTCCCATAAGCACGTCATGTGTTTTTTT
s panTro4.chr14_AACZ03171041_random     14903  89 -     37130 ----TAGAAAATCTTGGAATGA-------TGCCAACCATCATTCAGGGAGCCTACAAATCAGCCACATGCTGCTCCCAAAAGCACATCATGTGTTTCTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886643  93 - 202140232 AAATTAGAAAACCTTGGAATGA-------TGCCACCCATCATTCAGGGAGCCTACAAATCAGCCACATGCTGCTCCCATAAGCACAGCATGTGTTTCTTT
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579540  93 -  28733288 AAATTAGAAAACTTTGGAATGA-------TGCCACCCATCATTCAGGGAACCTACAAATCAGCCACATGCTGCTCCCAAAAGCACATCATGTGTTTCTTT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507548  68 - 229590362 ------------------------------GCCACCCATCATTA--GGGGCCTACAAATCAGCCACATGCTGCTCCCAGAAGCAGGTCATGTGTTTCCTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29266  68 +     87690 ------------------------------GCCACCCATCATTA--GGGGCCTACAAATCAGCCACATGCTGCTCCCAGAAGCAGGTCATGTGTTTCCTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193283  69 -    231459 ------------------------------GCCACCCATCATTA-GGGGGCCTACAAATCAGCCACATGCTGCTCCCAGAAGCAGGTCATGTGTTTCCTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535681  68 + 130588469 ------------------------------GCCACCCATCATTA--GGGGCCTACAAATCAGCCACATGCAGCTCCCAGAAGCACCTCATGTGTTTCCTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273407 100 + 210400635 AAATGAGAAAAACTTGGAATAGTCAAGCTTGCCACCCATCATTCAGGAAGCCTACAAATCAGCCACGTGCTGCTCCCAAAAGCACATCATATGTTTCTTT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955679 100 -   8296746 AGATTAGAAAATTTTGGAAAAACCACGCTTGCCATCCACCATTTAGGATACCTGAAAACCAACTGTTAGCTACTCCCATGAGCATATCATGTGTTCCTTT
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119533 100 +    761806 AGATTAAAAAACTTTGAAAATCCCAACCCTGCCATTCAGTATTTAGGATGCCTGTATAACAAATACTAGTTGCACTTATGAACACATTATCTGTTCCTTT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e tarSyr2.KE936210v1                   283536 105 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=6600.000000
s hg38.chr14_KI270722v1_random         169522 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     14992 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886736 1 - 202140232 C
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579633 1 -  28733288 C
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507616 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29334 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193352 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535749 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273507 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   283641 1 -    653294 C
i tarSyr2.KE936210v1                I 105 I 5
s otoGar3.GL873608                    1955779 1 -   8296746 C
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119633 1 +    761806 C
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=15527.000000
s hg38.chr14_KI270722v1_random         169523 5 +    194050 CCCTG
s panTro4.chr14_AACZ03171041_random     14993 5 -     37130 CCCTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886737 3 - 202140232 CC--G
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579634 5 -  28733288 CCCTG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507617 5 - 229590362 CCCTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29335 5 +     87690 CCCTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193353 5 -    231459 CCCTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535750 5 + 130588469 CCCTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273508 5 + 210400635 CCCTG
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955780 4 -   8296746 -CCTG
i otoGar3.GL873608                  C 0 I 1
s tupBel1.scaffold_138917.1-761806     119634 5 +    761806 TTTTG
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e tarSyr2.KE936210v1                   283642 5 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=26752.000000
s hg38.chr14_KI270722v1_random         169528 5 +    194050 AGAAA
s panTro4.chr14_AACZ03171041_random     14998 5 -     37130 AGAAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886740 5 - 202140232 AGAAA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579639 5 -  28733288 AGAAA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507622 5 - 229590362 AGAAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29340 5 +     87690 AGAAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193358 5 -    231459 AGAAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535755 5 + 130588469 AGAAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273513 5 + 210400635 AAAAA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   283647 5 -    653294 AGAGA
i tarSyr2.KE936210v1                I 5 I 162
s otoGar3.GL873608                    1955785 5 -   8296746 AGAAA
i otoGar3.GL873608                  I 1 C 0
s tupBel1.scaffold_138917.1-761806     119639 5 +    761806 AGAGA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=146660.000000
s hg38.chr14_KI270722v1_random         169533 37 +    194050 TTCCCTTAATGTATTCAATGGCGATGTTTAGAGAAAC
s panTro4.chr14_AACZ03171041_random     15003 37 -     37130 TTCTCTTAATGTATTCAATGGCAGTGTTTATAGAAAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886745 37 - 202140232 TTCCGTTAATGTATTCAATGGCAGTGTTTAGAGAAAC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579644 37 -  28733288 TTCCCTTAATGTATTCAATGGCAGTGTTTAGAGAAAC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507627 37 - 229590362 TTCCCTTAATGTATTCAGTGGCAGTGTTTGGAGAAAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29345 37 +     87690 TTCCCTTAATGTATTCAGTGGCAGTGTTTGGAGAAAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193363 37 -    231459 TTCCCTTAATGTATTCAATGGCAGTGTTTGGAGAAAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535760 37 + 130588469 TTCCCTTAATGTATTCAATGGCAGTGTTTGGAGAAAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273518 37 + 210400635 TTCCCTGAATGTATTCAGTGGCAGTGTTTAGAGAAAC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955790 37 -   8296746 ATCTCTTAATGTATTTGGTGGCAGTATGTAAAGAAAC
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119644 37 +    761806 CTTCCCTACTATATTTGGTGGCTGAATCTAAAGAAGC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419351 217 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e tarSyr2.KE936210v1                   283652 162 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=6006.000000
s hg38.chr14_KI270722v1_random         169570 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     15040 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886782 1 - 202140232 A
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579681 1 -  28733288 A
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507664 1 - 229590362 A
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29382 1 +     87690 A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193400 1 -    231459 A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535797 1 + 130588469 A
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   419568 1 -    492427 A
i rhiRox1.KN297764v1                I 217 I 227
s calJac3.chr1                      174273555 1 + 210400635 A
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955827 1 -   8296746 A
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119681 1 +    761806 A
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e tarSyr2.KE936210v1                   283652 162 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=53121.000000
s hg38.chr14_KI270722v1_random         169571 14 +    194050 GTATTACCGGCCAC
s panTro4.chr14_AACZ03171041_random     15041 14 -     37130 GTATTACTGGCCAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886783 14 - 202140232 GTATTACTGGCCAC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579682 14 -  28733288 GTATTACTGGCCAC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507665 14 - 229590362 GTGTTACCGGCCAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29383 14 +     87690 GTGTTACCGGCCAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193401 14 -    231459 GTGTTACCGGCCAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535798 14 + 130588469 GTGTTACCGGCCAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273556 14 + 210400635 GTATTACTGGCCAC
i calJac3.chr1                      C 0 I 1
s otoGar3.GL873608                    1955828 14 -   8296746 GCAGTATCAGACAA
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119682 14 +    761806 GCAGTATCGGCCAC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e saiBol1.JH378166                    5413849 168 -  14149710 I
e tarSyr2.KE936210v1                   283652 162 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=-1708.000000
s hg38.chr14_KI270722v1_random         169585 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     15055 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886797 1 - 202140232 A
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579696 1 -  28733288 G
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507679 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29397 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193415 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535812 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s saiBol1.JH378166                    5414017 1 -  14149710 G
i saiBol1.JH378166                  I 168 I 412
s otoGar3.GL873608                    1955842 1 -   8296746 G
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119696 1 +    761806 C
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e calJac3.chr1                      174273570 1 + 210400635 I
e nasLar1.chr6                       30102951 343 - 170588018 I
e tarSyr2.KE936210v1                   283652 162 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=6006.000000
s hg38.chr14_KI270722v1_random         169586 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     15056 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886798 1 - 202140232 T
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579697 1 -  28733288 T
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507680 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29398 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193416 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535813 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr6                       30103294 1 - 170588018 T
i nasLar1.chr6                      I 343 I 493
s calJac3.chr1                      174273571 1 + 210400635 T
i calJac3.chr1                      I 1 C 0
s otoGar3.GL873608                    1955843 1 -   8296746 T
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119697 1 +    761806 T
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283652 162 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=264426.000000
s hg38.chr14_KI270722v1_random         169587 79 +    194050 TTTAAATTAAGTTCTCCATAGTAGTAAAATCAGGGGAAAGATACA---T---------GGAA-------TCCAGTTTTTTTCAGCACCACAAACAAGC
s panTro4.chr14_AACZ03171041_random     15057 81 -     37130 TTTAAATTAAGTTCTCCATGGTAGTAAAATCAGGGGAAAGATAGG---T---------GGAAC-----ATTCAGTTTTGTTCAGCACCACACACAAGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886799 81 - 202140232 TTTAAATTAAGTTCTCCATAGTAGTAAAATCAAGGGAAAGATATG---T---------GGAAC-----ATTCAGTTTTGTTCAGCACCACACACGAGC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579698 81 -  28733288 TTTAAATTCAGTTCTCCATGGTAGTAAAGTCAGGGGAAAGATACA---T---------GGAAC-----ATTCAGTTTTGCTCAGCACCACACACAAGC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507681 89 - 229590362 TTTAAATTCAGTTCTCCATAGTAGTAAAATCAGGGGAAAGATACA---TGGAACATTCGGAAC-----ATTCGGTCTTGTTCA-CACCACACACAAGC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29399 80 +     87690 TTTAAATTCAGTTCTCCATAGTAGTAAAATCAGGGGAAAGATACG---T---------GGAAC-----ATTCGGTCTTGTTCA-CACCACACACAAGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193417 81 -    231459 TTTAAATTCAGTTCTCCATAGTAGTAAAATCAGGGGAAGGATACG---T---------GGAAC-----ATTCGGTCTTGTTCAGCACTGCACACAAGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535814 81 + 130588469 TTTAAATTCAGTTCTCCATAGTAGTAAAATCAGGGGAAAGATACG---T---------GGAAC-----ATTCGGTCTTGTTCAGCACCACACACAAGC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273572 81 + 210400635 TTTAAATGAAGTTCTCTGTAGTAGTAAAATCAGGGAAAAGATAAG---T---------GGAAC-----TTTCCGTTTTGTTCAGCACCATATACAAGC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955844 88 -   8296746 TTTCAATTAAGCTTTCTATAGTGGCAAA-TCGGGGGGGGGGCGGGGAAT---------GAAACATAAGATTCAGTTTTGTTCAGCACCATACACAAGC
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119698 78 +    761806 TTTTAATTAAA----CTGTGGTATCAAAGTCAGGAAGGAGATAAG---T---------ACAGCA----ATTCAGTTTTGTTAAAAATGAAACATAAGC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283652 162 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=24672.000000
s hg38.chr14_KI270722v1_random         169666 6 +    194050 CCCCAG
s panTro4.chr14_AACZ03171041_random     15138 6 -     37130 CCCAAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886880 6 - 202140232 CCCCAG
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579779 6 -  28733288 CCCCAG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507770 6 - 229590362 CCCCAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29479 6 +     87690 CCCCAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193498 6 -    231459 CCCCAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535895 6 + 130588469 CCCCAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273653 6 + 210400635 CCCCAG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   283814 6 -    653294 CGGCAA
i tarSyr2.KE936210v1                I 162 I 28
s otoGar3.GL873608                    1955932 6 -   8296746 CCCCAA
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119776 6 +    761806 CTCGAA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=45607.000000
s hg38.chr14_KI270722v1_random         169672 11 +    194050 CATGGGCAAAG
s panTro4.chr14_AACZ03171041_random     15144 11 -     37130 TATGGGCAAAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886886 11 - 202140232 CATGGGCAAAG
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579785 11 -  28733288 CATGGGCAAAG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507776 11 - 229590362 CGTGGGCAAAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29485 11 +     87690 CGTGGGCAAAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193504 11 -    231459 CATGGGCAAAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535901 11 + 130588469 CATAGGCAAAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273659 11 + 210400635 CATGGGCAAAG
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955938 11 -   8296746 CGTGGGCAAAG
i otoGar3.GL873608                  C 0 I 9
s tupBel1.scaffold_138917.1-761806     119782 11 +    761806 CTTGAGTGAAA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283820 28 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=38035.000000
s hg38.chr14_KI270722v1_random         169683 13 +    194050 TGATGATCAAAAG
s panTro4.chr14_AACZ03171041_random     15155 13 -     37130 TGATGATTGAAAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886897 13 - 202140232 TGATGATCGAAAG
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579796 13 -  28733288 TGGTGATCAAAAG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507787 13 - 229590362 TGATGACCAAAAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29496 13 +     87690 TGATGACCGAAAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193515 13 -    231459 TGATGACCGAAAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535912 13 + 130588469 TGATGACTGAAAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273670 13 + 210400635 TGATGATTGAAAG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119793 12 +    761806 -GGAGGTCTAAAA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283820 28 -    653294 I
e otoGar3.GL873608                    1955949  9 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=4646.000000
s hg38.chr14_KI270722v1_random         169696 4 +    194050 CTGT
s panTro4.chr14_AACZ03171041_random     15168 4 -     37130 CTGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886910 4 - 202140232 CTGT
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579809 4 -  28733288 CTGT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507800 3 - 229590362 C-GT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29509 3 +     87690 C-AT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193528 3 -    231459 C-GT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535925 4 + 130588469 CTGT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273683 4 + 210400635 CTGT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955958 4 -   8296746 CTAC
i otoGar3.GL873608                  I 9 C 0
s tupBel1.scaffold_138917.1-761806     119805 4 +    761806 CTGT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283820 28 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=3036.000000
s hg38.chr14_KI270722v1_random         169700 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     15172 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886914 1 - 202140232 G
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579813 1 -  28733288 G
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507803 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29512 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193531 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535929 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273687 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   283848 1 -    653294 A
i tarSyr2.KE936210v1                I 28 I 8
s otoGar3.GL873608                    1955962 1 -   8296746 A
i otoGar3.GL873608                  C 0 C 0
s tupBel1.scaffold_138917.1-761806     119809 1 +    761806 G
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=40338.000000
s hg38.chr14_KI270722v1_random         169701 9 +    194050 TCATGTTCC
s panTro4.chr14_AACZ03171041_random     15173 9 -     37130 TCATGTTCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886915 9 - 202140232 TCATCTTCC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579814 9 -  28733288 TCATGTTCC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507804 9 - 229590362 TCATGTTCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29513 9 +     87690 TCATGTTCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193532 9 -    231459 TCATGTTCC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535930 9 + 130588469 TCATGTTCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273688 9 + 210400635 TCGTGTTCC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955963 9 -   8296746 TCGTGTTCC
i otoGar3.GL873608                  C 0 I 13
s tupBel1.scaffold_138917.1-761806     119810 9 +    761806 TGATGTTCC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283849 8 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=-505.000000
s hg38.chr14_KI270722v1_random         169710 1 +    194050 -A
s panTro4.chr14_AACZ03171041_random     15182 1 -     37130 -A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886924 1 - 202140232 -A
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579823 1 -  28733288 -A
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507813 1 - 229590362 -A
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29522 1 +     87690 -A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193541 1 -    231459 -A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535939 1 + 130588469 -A
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273697 1 + 210400635 -A
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   283857 1 -    653294 -A
i tarSyr2.KE936210v1                I 8 I 129
s tupBel1.scaffold_138917.1-761806     119819 1 +    761806 T-
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e otoGar3.GL873608                    1955972 13 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=35917.000000
s hg38.chr14_KI270722v1_random         169711 12 +    194050 CCAAGTGTTTTT
s panTro4.chr14_AACZ03171041_random     15183 12 -     37130 CCAGGTGTTTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886925 12 - 202140232 CCAAGTGTTTTT
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579824 12 -  28733288 CCAAGTGTTTTT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507814 12 - 229590362 GCAAGCGTTTCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29523 12 +     87690 GCAAGCGTTTCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193542 12 -    231459 GCAAGCGTTTCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535940 12 + 130588469 CCAAGTGTTTCT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273698 12 + 210400635 TCAAGTGTTTTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119820 12 +    761806 TTAAATGTTTTT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283858 129 -    653294 I
e otoGar3.GL873608                    1955972 13 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=46179.000000
s hg38.chr14_KI270722v1_random         169723 14 +    194050 GTTGGACACAA-ACG
s panTro4.chr14_AACZ03171041_random     15195 14 -     37130 GTTGGACACAA-ACA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886937 14 - 202140232 GTTGGACACAA-ACG
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579836 14 -  28733288 GTTGGACGCAA-GTG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507826 14 - 229590362 GTTGGACACAA-ATG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29535 14 +     87690 GTTGGACACAA-ATG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193554 14 -    231459 GTTGGACACAA-ATG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535952 14 + 130588469 GTTGGACACAA-ATG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273710 14 + 210400635 GTTGGACACAA-ATG
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1955985 15 -   8296746 GTGGAACATGGCACG
i otoGar3.GL873608                  I 13 I 130
s tupBel1.scaffold_138917.1-761806     119832 14 +    761806 GTTGAATTCGC-ATA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283858 129 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=196021.000000
s hg38.chr14_KI270722v1_random         169737 66 +    194050 ---TTCTTATCCACCA----GGTGAAGGGTGGCCTCTACCTGTCAAAATCCCAGTGAAGTATGACCGGCCCCC
s panTro4.chr14_AACZ03171041_random     15209 66 -     37130 ---TTCTCATCCACCA----GTTGAAGGGTGGCCTCTACCTGTCTAAATCCCGGTGAAGTCTGACTGTCCCCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159886951 66 - 202140232 ---TTCTTATCCACCA----GTTGAAGGGTGGCCTCTACCTGTCTAAATCCCAGTGAAGTATGACTGGCCCCC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579850 66 -  28733288 ---TTCTCATCCACCA----GTTGAAGGGTGGCCTCTACCTGTCTAAATCCCAGTGAAGTCTGACTGGCCCCC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507840 70 - 229590362 ---TTCTCACCCACCAGCTGGCTGAAGGGTGGCCTCTACCTGTCTAAATCCTGGTGAAGACTGACTGGCTCCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29549 70 +     87690 ---TTCTCACCCACCAGCTGGCTGAAGGGTGGCCTCTACCTGTCTAAATCCTGGTGAAGACTGACTGGCTCCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193568 70 -    231459 ---TTCTCACCCACCAGCTGGCTGAAGGGTGGCCTCTACCTGTCTAAATCCTGGTGAAGACTGACTAGCTCCC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130535966 70 + 130588469 ---TTCTCACCCACCAGCTGGCTGAAGGGTGGCCTCTACCTGTCTAAATCCTGGTGAAGACTGACTGCCTTCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273724 66 + 210400635 ---TTCTTATCCATCA----GTTGAAGGGTGGCCTCTACCTGTTTAAATCTCTGTGAAGTCTGACTGGCCTCC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119846 65 +    761806 TTATTGTTACCT--------TTTAGAGGGTATCCTCTACCCATCTGAAACTCTGGGAGGTCTGGTTTGCTACA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419569 227 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283858 129 -    653294 I
e otoGar3.GL873608                    1956000 130 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=92055.000000
s hg38.chr14_KI270722v1_random         169803 25 +    194050 AAATCCAAAA----TTTTTCCCAACTTAC
s panTro4.chr14_AACZ03171041_random     15275 24 -     37130 AAATCCAAAA----TTTT-CCCAACTTAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887017 25 - 202140232 AAATCCAAAA----TTTTTCCCAACTTAC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579916 25 -  28733288 AAATCCGAAA----TTTTTCCCTACTTAC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507910 25 - 229590362 AAATCCAAAA----TTTTTCCCAACTTAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29619 25 +     87690 AAATCCAAAA----TTTTTCCCAACTTAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193638 25 -    231459 AAATCCAAAA----TTTTTCCCAACTTAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536036 25 + 130588469 AAATCCAAAG----TTTTTCCCAATTTAC
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   419796 29 -    492427 taacccaatacagttttgttccaactcac
i rhiRox1.KN297764v1                I 227 I 1524
s calJac3.chr1                      174273790 25 + 210400635 AAATCCAAAT----TTTTTCCCAACTTAC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119911 25 +    761806 AAATCTAAAA----TTTCTCCTACTTTAT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283858 129 -    653294 I
e otoGar3.GL873608                    1956000 130 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=38332.000000
s hg38.chr14_KI270722v1_random         169828 11 +    194050 AGATTAGCTTC
s panTro4.chr14_AACZ03171041_random     15299 11 -     37130 AGATTAGCTTC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887042 11 - 202140232 AGATTAGCTTC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579941 11 -  28733288 AGATTAGCTTC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507935 11 - 229590362 AGATTAGCTTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29644 11 +     87690 AGATTAGCTTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193663 11 -    231459 ACATTAGCTTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536061 11 + 130588469 AGATTAGCTTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273815 11 + 210400635 AGATTAGCTTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119936 11 +    761806 GGATAAGTTTT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419825 1524 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283858 129 -    653294 I
e otoGar3.GL873608                    1956000 130 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=5005.000000
s hg38.chr14_KI270722v1_random         169839 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     15310 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887053 1 - 202140232 A
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579952 1 -  28733288 A
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507946 1 - 229590362 A
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29655 1 +     87690 A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193674 1 -    231459 A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536072 1 + 130588469 A
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273826 1 + 210400635 A
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   283987 1 -    653294 A
i tarSyr2.KE936210v1                I 129 I 90
s tupBel1.scaffold_138917.1-761806     119947 1 +    761806 A
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419825 1524 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e otoGar3.GL873608                    1956000 130 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=109497.000000
s hg38.chr14_KI270722v1_random         169840 30 +    194050 AATTCCACACAACTGGCAACCCACTACCAC
s panTro4.chr14_AACZ03171041_random     15311 30 -     37130 AATTCCACACAATTGGCACCCCACTACCAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887054 30 - 202140232 AATTCCACACAACTGGCACCCCACTACCAC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579953 30 -  28733288 AATTCCACACAACTGGCACCCCACTACCAC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507947 30 - 229590362 AATTCCACACAACTGGCACCCCCCTACCAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29656 30 +     87690 AATTCCACACAACTGGCACCCCCCTACCAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193675 30 -    231459 AATTCCACACAACTGGCACCCCCCTACCGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536073 30 + 130588469 AATTCCACACAACTGGCACCCCCCTACCAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273827 30 + 210400635 AATTCTGCACAACTGGCACCCCACTACCAC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119948 30 +    761806 AAATCCATACAACCTGCACCTCACTACTAC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419825 1524 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283988 90 -    653294 I
e otoGar3.GL873608                    1956000 130 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=47601.000000
s hg38.chr14_KI270722v1_random         169870 14 +    194050 CAAGTCTGAGGCCC
s panTro4.chr14_AACZ03171041_random     15341 13 -     37130 CAA-TCTGAGGCCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887084 14 - 202140232 CAAGTCTGAGGCCC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579983 14 -  28733288 CAAGTCTGAGGCCC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507977 14 - 229590362 CAAGTTTGAGGCCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29686 14 +     87690 CAAGTTTGAGGCCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193705 14 -    231459 CAAGTTTGAGGCCC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536103 14 + 130588469 CAAGTTTGAGGCCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273857 14 + 210400635 CAAGTGTGAGGTCC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873608                    1956130 14 -   8296746 AAAGAGAGAGCCCC
i otoGar3.GL873608                  I 130 I 185
s tupBel1.scaffold_138917.1-761806     119978 14 +    761806 CAAGTATTAGTCCC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN297764v1                   419825 1524 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283988 90 -    653294 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=111715.000000
s hg38.chr14_KI270722v1_random         169884 46 +    194050 CAAGAACCCCACTGGAACCTTGCCTCAGTGGAAACTAACTCATCTT
s panTro4.chr14_AACZ03171041_random     15354 46 -     37130 CAAGAACCCCACTGGAACCTTGCCTCAGTGGAAACTAACTCATCTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887098 46 - 202140232 CAAGAACCCCACCAGAACCTTGCCTCAGTGGAAACTAACTCATCTT
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27579997 46 -  28733288 CAAGAACCCCGCTGGAATCTTGCCTCAGTGGAAACTAACTCATCTT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225507991 30 - 229590362 CAAGAATTCCAC----------------TGGAAACTAACTCATCTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29700 30 +     87690 CAAGAATTCCAC----------------TGGAAACTAACTCATCTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193719 30 -    231459 CAAGAATCCCAC----------------TGGAAACTAACTCATCTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536117 30 + 130588469 CAAGAATCCCAC----------------TGGAAACTAACTCATCTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273871 46 + 210400635 CCAGAACCCCACTGGAACCTTGTCTCAGTGGAAACTAACCCATCTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_138917.1-761806     119992 46 +    761806 CACGAACCCCACTGGAATCTTTCTTTGGTGGAAACTAACTTATCTT
i tupBel1.scaffold_138917.1-761806  C 0 I 1
e rhiRox1.KN297764v1                   419825 1524 -    492427 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e tarSyr2.KE936210v1                   283988 90 -    653294 I
e otoGar3.GL873608                    1956144 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=22341.000000
s hg38.chr14_KI270722v1_random         169930 4 +    194050 CATC
s panTro4.chr14_AACZ03171041_random     15400 4 -     37130 CATC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887144 4 - 202140232 CATC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580043 4 -  28733288 CATC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508021 4 - 229590362 CATC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29730 4 +     87690 CATC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193749 4 -    231459 CATC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536147 4 + 130588469 CATC
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN296749v1                   611624 4 -   1517582 CATC
i rhiRox1.KN296749v1                n 1524 n 1524
s calJac3.chr1                      174273917 4 + 210400635 CATC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284078 3 -    653294 -ATT
i tarSyr2.KE936210v1                I 90 I 1
s tupBel1.scaffold_138917.1-761806     120039 4 +    761806 CATC
i tupBel1.scaffold_138917.1-761806  I 1 C 0
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e otoGar3.GL873608                    1956144 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=366125.000000
s hg38.chr14_KI270722v1_random         169934 97 +    194050 TATTTCAAGTTTGGTAGTAATTTCCGTTATTGACTGTTTTGACCTCTGATTGTGGGAAATATTATGGAAACTTTTAAGGAAAGCTATTTGGAAGGCA
s panTro4.chr14_AACZ03171041_random     15404 97 -     37130 TATTTCAAGGTTGGTAGTAATTTCAGCTATTGACTGCTTTGACCTCTGATTGTGGTAAATATTATGGGAACTTTTAAGGAAAGCTATTTGGAAGGCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887148 97 - 202140232 TATTTCAAGGTTGGTAGTAATTTCCATTATTGACTGCTTTGACCTCTGATTGTGGGAAATATTATGGGAATTTTTAAGGAAAGCCATTTGGAAGCCA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580047 96 -  28733288 TATTTCAAG-TTGGTAGTAATTTCAGTTATTGATTGCTTTGACCTCTGATTGTGGGAAATATTATAGGAACTTTCAAGGAAAGCTATTTGGAAGGCA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508025 97 - 229590362 TATTTCAAGGTTGGTAGTAATTTCAGTTATTGACTGCTTTGACCTCTGACTGTGGGAAATATTATGGGAACTTTCAAGGAAAACTATTTGGAAGGCA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29734 97 +     87690 TATTTCAAGTTTGGTAGTAATTTCAGTTATTGACTGCTTTGACCTCTGACTGTGGGAAATATTATGGGAACTTTCAAGGAAAACTATTTGGAAGGCA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193753 94 -    231459 TATTTCAAGGTTGGTAGTAATTTCAGTTATTGACTGCTTTGACCTCTGACTGTGGGAAA---TATGGGAACTTTCAAGGAAAACTATTTGGAAGGCA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536151 95 + 130588469 TATTTCAAGGTTGGTAGTAATTT--GTTATTGACTGCTTTGACCTCTGACTGTGGGAAATATTATGGGAACTTTCAAGGAAAACTATTTGGAAGGCA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174273921 97 + 210400635 TATTTCAAGGTTGGTAGTAATTTTAGTTATTGACTGCTTTGACCTCTGATTGTGGGAAATATTATGGGAATTTTCAAGGAAAGTTATTTAGAAGGCA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284082 84 -    653294 ------------TATACTACTTTTGTTTATTGATTGTTTTGGCCTCTGATCATAGGAGCTATTATGAGAACTTTCAGAAGATACTGCTTGAAAGGC-
i tarSyr2.KE936210v1                I 1 C 0
s tupBel1.scaffold_138917.1-761806     120043 97 +    761806 TATTTCAAGGTTGGTACTAATTTTGGTTATTGACTGTTTTGACCTATGTTTATAAGAGCCATTATGAGGACTTATGGGGGAAGCTATTCAAAAGGCA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414018 412 -  14149710 I
e otoGar3.GL873608                    1956144 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=5500.000000
s hg38.chr14_KI270722v1_random         170031 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     15501 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887245 1 - 202140232 G
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580143 1 -  28733288 G
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508122 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29831 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193847 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536246 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274018 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378166                    5414430 1 -  14149710 G
i saiBol1.JH378166                  I 412 I 77
s tupBel1.scaffold_138917.1-761806     120140 1 +    761806 G
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e tarSyr2.KE936210v1                   284166 0 -    653294 C
e otoGar3.GL873608                    1956144 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=188585.000000
s hg38.chr14_KI270722v1_random         170032 49 +    194050 GACTGAGCCAGGTTAAATAACAACGTCCAAACCAGCAAGGAGGCAGAAG
s panTro4.chr14_AACZ03171041_random     15502 49 -     37130 GACTGAGCCAGGTTAAATAATGACGTCCAAACCAGCAAGGAGGCAGAAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887246 49 - 202140232 GACTGAGCCAGGTTAAATAACAATGTCCAAACCAGCAAGGAGGCAGAAC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580144 49 -  28733288 GACTGAGCCAGGTTAAATAGCAACGTCCAAACCAGCAAGAAGGCAGAAT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508123 49 - 229590362 GACTGAGCCAGGTTAAATAACAATGTCCAAACCAGCAAGGAGGCAGAAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29832 49 +     87690 GACTGAGCCAGGTTAAATAACAATGTCCAAACCAGCAAGGAGGCAGAAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193848 49 -    231459 GACTGAGCCAGGTTAAATAACAATGTCCAAACCAGCAAGGAGGCAGAAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536247 49 + 130588469 GACTGAGCCAGGTTAAATAACAATGTCCAAACCAGCAAGGAGGCAGAAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274019 49 + 210400635 GACAGAGCCAGGTTAAATAACAACGTCCAAATCAGCAAGAAGACAGAGC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284166 35 -    653294 --------------AAATAGCAAGATCTGAACCTGTGAGGAGGCAGAAT
i tarSyr2.KE936210v1                C 0 C 0
s tupBel1.scaffold_138917.1-761806     120141 49 +    761806 GAGTAAGCCAGGCTAAATAGTAAGATCCAAATTATTGTGGGGGCAGAAG
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414431 77 -  14149710 I
e otoGar3.GL873608                    1956144 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=13474.000000
s hg38.chr14_KI270722v1_random         170081 5 +    194050 ----GAAGA
s panTro4.chr14_AACZ03171041_random     15551 5 -     37130 ----AAAGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887295 5 - 202140232 ----GAAGA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580193 5 -  28733288 ----GAAGC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508172 5 - 229590362 ----AAAGC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29881 5 +     87690 ----AAAGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193897 5 -    231459 ----AAAGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536296 5 + 130588469 ----AAAGC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274068 5 + 210400635 ----AAAGC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284201 5 -    653294 ----AGAAT
i tarSyr2.KE936210v1                C 0 C 0
s otoGar3.GL873608                    1956329 5 -   8296746 ----TAAGC
i otoGar3.GL873608                  I 185 n 185
s tupBel1.scaffold_138917.1-761806     120190 9 +    761806 ATACTAAGC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414431 77 -  14149710 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=13795.000000
s hg38.chr14_KI270722v1_random         170086 3 +    194050 AAA
s panTro4.chr14_AACZ03171041_random     15556 3 -     37130 AAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887300 3 - 202140232 AAA
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580198 3 -  28733288 AAA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508177 3 - 229590362 AAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29886 3 +     87690 AAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193902 3 -    231459 AAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536301 3 + 130588469 AAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274073 3 + 210400635 AAA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284206 3 -    653294 AAG
i tarSyr2.KE936210v1                C 0 I 4
s tupBel1.scaffold_138917.1-761806     120199 3 +    761806 AAA
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103295 493 - 170588018 I
e saiBol1.JH378166                    5414431 77 -  14149710 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=4664.000000
s hg38.chr14_KI270722v1_random         170089 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     15559 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887303 1 - 202140232 T
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580201 1 -  28733288 T
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508180 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29889 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193905 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536304 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr6                       30103788 1 - 170588018 C
i nasLar1.chr6                      I 493 I 20
s calJac3.chr1                      174274076 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284213 1 -    653294 T
i tarSyr2.KE936210v1                I 4 C 0
s tupBel1.scaffold_138917.1-761806     120202 1 +    761806 T
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e saiBol1.JH378166                    5414431 77 -  14149710 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=59122.000000
s hg38.chr14_KI270722v1_random         170090 16 +    194050 TCTCTGTGGACCCAGG
s panTro4.chr14_AACZ03171041_random     15560 16 -     37130 TCTCTGTGGACCCAGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887304 16 - 202140232 TCTCTGTGGACCCAGG
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580202 16 -  28733288 TCTCTGCAGACCCAGG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508181 16 - 229590362 TCTCTGGGGATCTAGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29890 16 +     87690 TCTCTGGGGATCTAGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193906 16 -    231459 TCTCTGGGGATCCAGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536305 16 + 130588469 TCTCTGGGGACCCAGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274077 16 + 210400635 TCTCTGTGGAGCCAGG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284214 16 -    653294 TCTCTGCAGACCCAAG
i tarSyr2.KE936210v1                C 0 C 0
s tupBel1.scaffold_138917.1-761806     120203 16 +    761806 TTTCCTCAGACCCAGT
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103789 20 - 170588018 I
e saiBol1.JH378166                    5414431 77 -  14149710 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=19773.000000
s hg38.chr14_KI270722v1_random         170106 9 +    194050 AGATACCCT--
s panTro4.chr14_AACZ03171041_random     15576 9 -     37130 GGATACCCT--
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887320 9 - 202140232 AGATACCCT--
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580218 9 -  28733288 AGATACCTT--
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508197 9 - 229590362 AGATACCCT--
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29906 9 +     87690 AGATACCCT--
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193922 9 -    231459 AGATACCCT--
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536321 9 + 130588469 AGATACCCT--
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274093 9 + 210400635 AGATGTCCT--
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE940941v1                   432795 7 +    569393 GGATCTT----
i tarSyr2.KE940941v1                n 0 C 0
s tupBel1.scaffold_138917.1-761806     120219 9 +    761806 --ATAGGCTCG
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e nasLar1.chr6                       30103789 20 - 170588018 I
e saiBol1.JH378166                    5414431 77 -  14149710 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e gorGor3.chr5                       32189682 869 - 165930986 I

a score=957.000000
s hg38.chr14_KI270722v1_random         170115 1 +    194050 -G
s panTro4.chr14_AACZ03171041_random     15585 1 -     37130 -G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650585                    7143126 1 +  27154867 -G
i panPan1.JH650585                  N 0 N 0
s gorGor3.chr5                       32190551 1 - 165930986 -G
i gorGor3.chr5                      I 869 N 0
s ponAbe2.chr3                      159887329 1 - 202140232 -G
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580227 1 -  28733288 -G
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508206 1 - 229590362 -G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29915 1 +     87690 -G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193931 1 -    231459 -G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536330 1 + 130588469 -G
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr6                       30103809 1 - 170588018 -G
i nasLar1.chr6                      I 20 N 0
s calJac3.chr1                      174274102 1 + 210400635 -A
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378166                    5414508 1 -  14149710 -G
i saiBol1.JH378166                  I 77 N 0
s tarSyr2.KE940941v1                   432802 1 +    569393 -G
i tarSyr2.KE940941v1                C 0 C 0
s tupBel1.scaffold_138917.1-761806     120228 1 +    761806 T-
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=111384.000000
s hg38.chr14_KI270722v1_random         170116 41 +    194050 GGAGCTGGAA---------------------------AA-GGGGTCACCTCATGGCATGTGAACCGAGC
s panTro4.chr14_AACZ03171041_random     15586 41 -     37130 GGAGCTGGAA---------------------------AA-GGGGTCACCTCGTGGCATGTGAACCGAGC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887330 41 - 202140232 GGAGCTGGAA---------------------------AA-GGGGTCACCTCATGGCATGTGAACCGAGC
i ponAbe2.chr3                      C 0 C 0
s nomLeu3.chr24                      27580228 41 -  28733288 GGATCTGGAA---------------------------AA-GGGGTCACCTCGTGGCACGTGAACCGAGC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508207 41 - 229590362 GGAGCTGGAA---------------------------GA-GGGGTCACCTCATGGCACGTGAACCGAGC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29916 41 +     87690 GGAGCTGGAA---------------------------GA-GGGGTCACCTCATGGCACGTGAACCGAGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193932 41 -    231459 GGAGCTGGAA---------------------------GA-GGGGTCACCTCATGGCACGTGAACTGAGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536331 68 + 130588469 GCAGCTGGAAGAGGGGTCACCTCATGGCACGTGAACCGA-GGGGTCACCTCATGGCACGTGAACCGAGC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274103 25 + 210400635 -------GAA---------------------------G----------CTAATGGCACATGAACGGAGC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE940941v1                   432803 42 +    569393 GGGCTTGGAA---------------------------AACAGGGCTACCCGGTGGCATTTGAGCATGGG
i tarSyr2.KE940941v1                C 0 n 0
s tupBel1.scaffold_138917.1-761806     120229 42 +    761806 GTTGTTGGAA---------------------------AAGAGGGCCACCTAGTGGCATTAGGACAGGGG
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=150882.000000
s hg38.chr14_KI270722v1_random         170157 43 +    194050 TCAGTTGCATCGGCTTACCCCTAAGTCTGCCTAGCTCCTGATC
s panTro4.chr14_AACZ03171041_random     15627 43 -     37130 TCAGTTGCATCAGCTTACCCCTAAGTCTGCCTAGCTCCTGATC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chr3                      159887371 43 - 202140232 TCAGTTGCATCGGCCTACCCCTAAGTCTGCCTAGCTCCTGATC
i ponAbe2.chr3                      C 0 N 0
s nomLeu3.chr24                      27580269 43 -  28733288 TCAGTTGCATCAGCCTACCTCTAAGTCTGCCTAGCTACTGATC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508248 42 - 229590362 TCAGTTG-ATCGGCCTATCCCTGAGTCTGCCTAGCTCCTGGTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29957 42 +     87690 TCAGTTG-ATCGGCCTATCCCTGAGTCTGCCTAGCTCCTGGTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     193973 42 -    231459 TCAGTTG-ATCGGCCTATCCCTAAGTCTGCCTAGCTCCTGGTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536399 43 + 130588469 TCAATTGCATCGGCCTATCCCTAAGTCTGCCTAGCTCCTGGTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274128 43 + 210400635 TCAGTTGCATCAGCCTAATCCTAAATTGGCCTAGCTCCTGATC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284230 43 -    653294 TCAGTTAATTCTGTTTATCCACAAATCTGCATAGCTCCTGAAC
i tarSyr2.KE936210v1                C 0 C 0
s tupBel1.scaffold_138917.1-761806     120271 43 +    761806 TCAAATAAATCTGTCTGCCCATAAATCTTCATGGCTCCTGAAC
i tupBel1.scaffold_138917.1-761806  C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=97438.000000
s hg38.chr14_KI270722v1_random         170200 34 +    194050 AAGTTACAGGGGGAAATTTACTCTTATGTGGTCC
s panTro4.chr14_AACZ03171041_random     15670 34 -     37130 AAGTTGCAGAGGGAAACTTACTCTTATGTGGTAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580312 34 -  28733288 AAGTTGCAGGGGGAAACTTACTCTTACATGGTCC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508290 33 - 229590362 AAGTCGCAG-GAGAAACTTACTCTTATGTGGTCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          29999 33 +     87690 AAGTCGCAG-GAGAAACTTACTCTTATGTGGTCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194015 33 -    231459 AAGTCGCAG-GAGAAACTTACTCTTATGTGGTCC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536442 33 + 130588469 AAGCTGCAG-GGGAAACTTACTCTTATGTGGTCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274171 34 + 210400635 AAGTTGCAGGGGGAAACTTACTTTTGTGTGGTCC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284273 34 -    653294 AAGGTCCAGTGGGAAATTTACTTTTTTGTGGCTC
i tarSyr2.KE936210v1                C 0 C 0
s tupBel1.scaffold_138917.1-761806     120314 34 +    761806 AAGGTCCGGTGGGGAACTTACCTTTCTGTGGTCC
i tupBel1.scaffold_138917.1-761806  C 0 N 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=23489.000000
s hg38.chr14_KI270722v1_random         170234 9 +    194050 ACTTACAGC
s panTro4.chr14_AACZ03171041_random     15704 9 -     37130 ACTTACAGC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580346 9 -  28733288 ACTTACAGC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508323 9 - 229590362 ACTTACAGC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          30032 9 +     87690 ACTTACAGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194048 9 -    231459 ACTTACAGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536475 9 + 130588469 ACTTACAGC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274205 9 + 210400635 ATTTACAGC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE936210v1                   284307 9 -    653294 CTATATAAC
i tarSyr2.KE936210v1                C 0 N 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=204677.000000
s hg38.chr14_KI270722v1_random         170243 86 +    194050 TGTGCAACCTACAATGTGCTCTAGATGGAGCAGCTGTAAGATGTCAGAGCTAGCAACAGCCTA-GTCCCTGAGGCACTCTGTGGAGT
s panTro4.chr14_AACZ03171041_random     15713 86 -     37130 TGTGCAACCTGCAATGTGCTCTAGATGGAGCAGCTCTAAGATGTCAGAGCTAGCAACAGCCTA-GTCCCTGAGGCACTCTGTGGAGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580355 86 -  28733288 TGTGCAACCTGCAATGTGCTCCAGAAGGAGCAGCTGTAAGATATCAGAGCTAGCAACAACCTA-GTCCCTGAGGCACTCTGTGGAGT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508332 87 - 229590362 TGTGCAGCCTGCAATGTGCTCCAGAGAGAGCAGCTGTAAGATGTCAGAGCTAGCAACAGCCTAGGTCCCTCAGGCACTCTGTGGAGT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          30041 87 +     87690 TGTGCAGCCTGCAATGTGCTCCAGAGAGAGCAGCTGTAAGATGTCAGAGCTAGCAACAGCCTAGGTCCCTGAGGCACTCTGTGGAGT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194057 87 -    231459 TGTGCAGCCTGCAATGTGCTCCAGACAGAGCAGCTGTAAGATGTCAGAGCTAGCAACAGCCTAGGTCCCTGAGGCACTCTGTGGAGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536484 87 + 130588469 TGTGCAGCCTGTGATGTGCTCCAGACGGAGCAGCTGTAAGATGTCAGAGCTAGCAACAGCCTAGGTCCCTGAGGCACTCTGTGGAGT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274214 87 + 210400635 TGTCCAACCTGCAATGTGCTCCAGGTGGAGCAACTGTAAGATGTCAGAGCTAGCAACAGCCTAGGTCCCTGAGGCACTCTGTGGAGT
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=13385.000000
s hg38.chr14_KI270722v1_random         170329 18 +    194050 ACCACATACCCCTCACTG
s panTro4.chr14_AACZ03171041_random     15799 18 -     37130 ACCACATGCCCCTCACCG
i panTro4.chr14_AACZ03171041_random C 0 I 560
s nomLeu3.chr24                      27580441 18 -  28733288 ACCACATACCCCTCACCG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508419 17 - 229590362 -CCACATACCCCTCACTG
i rheMac3.chr1                      C 0 C 0
s calJac3.chr1                      174274301 18 + 210400635 ACCACATATCCCTCCATG
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130536571  0 + 130588469 C
e papAnu2.JH684932                     194144  0 -    231459 C
e macFas5.chr5_KE145639_random          30128  0 +     87690 C

a score=1910.000000
s hg38.chr14_KI270722v1_random         170347 2 +    194050 AC
s panTro4.chr14_AACZ03171041_random     16377 2 -     37130 AC
i panTro4.chr14_AACZ03171041_random I 560 C 0
s nomLeu3.chr24                      27580459 2 -  28733288 AC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508436 2 - 229590362 AC
i rheMac3.chr1                      C 0 C 0
s calJac3.chr1                      174274319 2 + 210400635 AC
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130536571 0 + 130588469 C
e papAnu2.JH684932                     194144 0 -    231459 C
e macFas5.chr5_KE145639_random          30128 0 +     87690 C

a score=3438.000000
s hg38.chr14_KI270722v1_random         170349 6 +    194050 CTGCAT
s panTro4.chr14_AACZ03171041_random     16379 6 -     37130 CTGCAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580461 6 -  28733288 CTGCAT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225508438 6 - 229590362 CTGCAT
i rheMac3.chr1                      C 0 I 1637
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e calJac3.chr1                      174274321 0 + 210400635 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130536571 0 + 130588469 C
e papAnu2.JH684932                     194144 0 -    231459 C
e macFas5.chr5_KE145639_random          30128 0 +     87690 C

a score=29720.000000
s hg38.chr14_KI270722v1_random         170355 121 +    194050 CTGTGGAGTACCACACACCCCTCATTGACCTGCATCTGCAGAGTACCACACACCCCTCACCGACCTGCATCTGTGGAGTACCACATACCCCTCACCGACCTGCATCTTTGGAGTACCACAT
s panTro4.chr14_AACZ03171041_random     16385 121 -     37130 CTGTGGGGTACCACATGCCCCTCACCGACCTGCATCTGTGGAGTACCACATGCCCCTCACCGACCTGCATCTGTAGAGTACCACATGCCCCTCACCCACCTACATCTGTGGAGTACCACAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580467 121 -  28733288 CTGTGGAGTATCACATGCCCCTCACAGACCTGCATCTGTGGAGTACCACATGCCCCTCACCCACCTGCATCTGTGGAGTACCACATGCCCCTCACCGACCTGCATCTGTGGAGTATCACAT
i nomLeu3.chr24                     C 0 I 207
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e calJac3.chr1                      174274321   0 + 210400635 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130536571   0 + 130588469 C
e papAnu2.JH684932                     194144   0 -    231459 C
e macFas5.chr5_KE145639_random          30128   0 +     87690 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=4723.000000
s hg38.chr14_KI270722v1_random         170476 18 +    194050 GCCCCTCACTGATCTGCA
s panTro4.chr14_AACZ03171041_random     16506 18 -     37130 GCCCCTCACCGATCTGCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580795 18 -  28733288 GCCCCTCACTGACCTGCA
i nomLeu3.chr24                     I 207 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e calJac3.chr1                      174274321  0 + 210400635 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130536571  0 + 130588469 C
e papAnu2.JH684932                     194144  0 -    231459 C
e macFas5.chr5_KE145639_random          30128  0 +     87690 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=4364.000000
s hg38.chr14_KI270722v1_random         170494 11 +    194050 TCTTTGGAGTA
s panTro4.chr14_AACZ03171041_random     16524 11 -     37130 TCTGTGGAGAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580813 11 -  28733288 TCTGTGGAGTA
i nomLeu3.chr24                     C 0 C 0
s micMur1.scaffold_54349                 4217 11 +      4968 TTTGTGGAGCA
i micMur1.scaffold_54349            N 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e calJac3.chr1                      174274321  0 + 210400635 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130536571  0 + 130588469 C
e papAnu2.JH684932                     194144  0 -    231459 C
e macFas5.chr5_KE145639_random          30128  0 +     87690 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=29962.000000
s hg38.chr14_KI270722v1_random         170505 19 +    194050 CCACATACCCCTCACCGAT
s panTro4.chr14_AACZ03171041_random     16535 19 -     37130 CCACATATCCCTCACCGAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580824 19 -  28733288 CCACATGCCCCTCACCGAC
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30128 19 +     87690 CCACATACCCCTCACTGAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194144 19 -    231459 CCACATACCCCTCACTGAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536571 19 + 130588469 CCACATACCCCTCACTGAC
i chlSab2.chr20                     C 0 C 0
s micMur1.scaffold_54349                 4228 19 +      4968 CCACACACACGTCATTGAC
i micMur1.scaffold_54349            C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e calJac3.chr1                      174274321  0 + 210400635 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=45234.000000
s hg38.chr14_KI270722v1_random         170524 19 +    194050 CTGCATAGGAAGGTGAGTG
s panTro4.chr14_AACZ03171041_random     16554 19 -     37130 CTGCATAGGAAGGTGGGTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580843 19 -  28733288 CTGCATAGGAAGGTgagtg
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30147 19 +     87690 CTGCATAGGAAGGTGAGTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194163 19 -    231459 CTGCATAGGAAGGTGAGTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536590 19 + 130588469 CTGCATAGGAAGGTGAGTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274321 19 + 210400635 CTGCATAGGAAGGTGAATG
i calJac3.chr1                      C 0 I 2
s micMur1.scaffold_54349                 4247 19 +      4968 ATGCACAGGAAGGTGAGTC
i micMur1.scaffold_54349            C 0 C 0
e rhiRox1.KN296749v1                   611628 1524 -   1517582 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=4431.000000
s hg38.chr14_KI270722v1_random         170543 2 +    194050 AG
s panTro4.chr14_AACZ03171041_random     16573 2 -     37130 AG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580862 2 -  28733288 ag
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30166 2 +     87690 AG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194182 2 -    231459 AG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536609 2 + 130588469 AG
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                    71834 2 +    492427 aa
i rhiRox1.KN297764v1                n 1524 I 572
s micMur1.scaffold_54349                 4266 2 +      4968 AG
i micMur1.scaffold_54349            C 0 C 0
e calJac3.chr1                      174274340 2 + 210400635 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=305442.000000
s hg38.chr14_KI270722v1_random         170545 154 +    194050 AAATAAGTTCTATTCTGAAAATTAGCGAAAATTTTAAAAACTATACAAAACaaaaataaccattcacagtctctggaaatggtcccaagagcatacagcaaataaagTTTTACTcac----atgcaggaattcaaagaacttcaaattagacaaacat
s panTro4.chr14_AACZ03171041_random     16575 154 -     37130 AAATAAATTCTCTTCTGAAAATTAGCGAAAATTTAAAAAACTATACAAAACaaaaataaccattcacagtctctggaaatggtcccaagagcacacagcaaataaaATTTTACTcac----atgcaggaattcaaggaacttcaaattagacaaacat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27580864 154 -  28733288 aaataagttctcttctgaaaattagcaaaaatttcaaaaactacacaaaacaaaaataaccattcacagtctctggaaatggtcccaagagcatacagcaaataaagttttactcac----atgcaggaactcaaggaacttcaaattagacaaacat
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30168 154 +     87690 AAATAAGTTCTCTTCTGAAAATTAGTCAAAATTTCAAAAACTACACAAAACaaaaataaccatccacagtctctgcaaatggtcccaagagcatacagcaaataaacttttactcac----atgcaggaactcatggaacttcaaatgagacaaatat
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194184 154 -    231459 AAATAAGTTCTCTTCTGaaaattagtcaaaatttcaaaaactacacaaaacaaaaataaccatcCACAGTCTCTGCAAATGGTCCCAAGAGCATACAGCAAATAAACTTTTACTCAC----ATGCAGGAACTCACGCAACTTCAAATGAGACAAACAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130536611 158 + 130588469 AAATAAGTTCTCTTCTGAAAATTATTCAAAATTTCAAAAACTACACAAAACaaaaataaccattcacagtctctgcaaatggtcccaagagcatacagcaaataaacttttactcacgtgaatGCaggaactcacggaacttcaaatgagacaaacgt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174274342 141 + 210400635 AAATAAGTTCTTTTCTG----------AAAATTTCAAAAACTATACAAAACAAATACAACCATTCATCATTTCTCAAAATGGTCCCAAGAGCATA---CAAATAAAGTTTTACTcac----atgcagcaactcaaggagttgcagataagacgaacat
i calJac3.chr1                      I 2 C 0
s micMur1.scaffold_54349                 4268 149 +      4968 AAATAAGTTCTCTTCTGAAAATTGATGAAAATTCCAAAAACTATACAAAAGaaaaacaaccatttaaagtctctggaaatggt-ccaaggtcatacagctaataaagTTTTAC--------ATGCCGGAACCCAGCGAACTTCAATTAGGATAAACAt
i micMur1.scaffold_54349            C 0 N 0
e rhiRox1.KN297764v1                    71836 572 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=683120.000000
s hg38.chr14_KI270722v1_random         170699 411 +    194050 aaagagatccacagacacatcatagtaatgatgctgaaagctaaagtcacatgggaaacgctgaaagcag-aagtgagataaagaaagaggagccattgagcttaaaagggatcctctaaaactgttataaataggaggaatcccaaggagactaacagctgatttctcaccagaaacaatagaggcctggaagaa-gaggaataacatatacgatgtctgaag-aaaatatcttgtattcaccatggctatggtt-aaaaatgagggtgaaacaaagacatacctagattaacaaaactgaagtaattcattgctaccagacctgtcttacaagaaacattaaaagaagttattcaggctgaaaatgataacctcagacaataatccaaattt--------------------acacacacacacacacacaca----
s panTro4.chr14_AACZ03171041_random     16729 412 -     37130 aaagagatccacagacacatcatagtaatgatgctgaaagctaaagacacatgggaaacgctgaaagcag-aagtgagataaagaaagaggagccattgagcttaaaaggggtcctctaaaactgttataaataggaggaatcccaaggagactaacagctgatttctcaccagaaacaatagaggccaggaagaa-gaggaataacatatacaatgtctgaag-aaaatatcttatattcaccatgtctatggttaaaaaatgagggtgaaacaatgacatacctagattaacaaaactgaaataattcattgctaccagacctatcttacaagacatattaaaagaagttattcaggctgaaaatgataaccccagacaataatccaaattt--------------------acacacacacacacacacaca----
i panTro4.chr14_AACZ03171041_random C 0 I 8
s nomLeu3.chr24                      27581018 413 -  28733288 aaagagatccacagacacatcatagtaatgatgctgaaagctaaagacacataggaaacgctgaaagcag-aagtgagataaagaaagaggagccattgagcttcaaagggatcctctaaaactgttataaataggaggaatcccaaggagactaacagttgatttctcaccagaaacaatagaggccaggaagaagggggaataacatatacaatgtctgaag-aaaatatcctgtattcatcatggctatggttcaaaactgagggtgaaacaaagacatgcctagattaacaaaactgagataattcattgctaccagacctatcttacaagaaatattaaaagaagttattcaggctgaaaatgattaccccagacaataatccaaattt--------------------acacacacacacacacacaca----
i nomLeu3.chr24                     C 0 I 4
s macFas5.chr5_KE145639_random          30322 406 +     87690 aaagagatccacagacacatcatagtaatgacgctgaaagctgaagacacacaggaaatgctgaaagcagaaagtgagataaagaaagaggagccattgagcttaaaagggatcctctaaaacggttataaataggaggaatcccaaggagactaacagctgatttctcaccagaaatagtagaggccaggaagaa-ggagagtaacatatacaatgtctgaag-aaaaaatcctgtattcagcatggctatggttcaaaaatgagggtgaaacgaagacatacctagattaacaaaactgagataattcattgctaccagacctatctcacaagacatattaaaagaagttattcaggctgaaaatgattacc-cacacaataatccaaattt--------------------------acacacacacacaca----
i macFas5.chr5_KE145639_random      C 0 I 4
s papAnu2.JH684932                     194338 416 -    231459 AAAGAGATCCACAGACACATCATAGTAATGACGCTGAAAGCTGAAGACACACAGGAAATGCTGAAAGCAGAAAGTGAGATAAAGAAAGAGGAGCCATTGAGCTTAAAAGGGATCCTCTAAAACGGTTATAAATAGGAGGAATCCCAAGGAGACTAACAGCTGATTTCTCACCAGAAATAGTAGAGGCCAGGAAGAA-GGGGAGTAACATATACAATGTCTGAAG-AAAAAATCCTGTATTCAGCATGGCTATGGTTCAAAAATGAGGGTGAAACGAAGACATACCTAGATTAACAAAACTGAGATAATTCACTGCTACCAGACCTATCTCACAAGACATATTAAAAGAAGTTATTCAGGTTGAAAATGATTACC-CACACAATAATccaaattt----------------acacacacacacacacacacacaca----
i papAnu2.JH684932                  C 0 I 4
s chlSab2.chr20                     130536769 432 + 130588469 aaagagatccacagacacatcatagtaatgatgctgaaagctgaagacacacaggaaatgctgaaagcagaaagtgagataaagaaagaggagcccttgagcttaaaagggatcctctaaaacggttataaacaggaggaatcccaaggagactaacagccgacttctcaccagaaatagtagaggccaggaagaa-ggggagtaacatatacaatgtctgaag-aaaaaatcctgtattcagcatggctatggttcaaaaatgagggtgaaacaaagacatacctagattaacaaaactgagataattcattgctaccagacctatctcacaagacatattaaaagaagttattcaggctgaaaatgattacc-cacacaataatccaaatttatacacacacacacacacacacacacacacacacacacaca----
i chlSab2.chr20                     C 0 I 4
s calJac3.chr1                      174274483 434 + 210400635 agagagatccacagacacaccatagtcatgatgctgaaagctgaagacacatgggaaatgctgaaagcagaacgtgagataaagaaagagaagccattgaatttcaaagggatcctctaaaactgt--gaaataggaggaatcgcaatgagattaacagctgacttctcagcagaaacaatagaggccaggaagaa-agggaataacatgta--atgatggaagaaaaaaatcctgtattcagcacggccatggttcagaaatgagagtgaaacagagacatacccagattaacaaaactgagataatgtgttgctactatacctatcttatgagaaatattaaaagaagttattcaggctgaaaatgattaccccagaaaataattcaaatttacacacacacacacacacacacacacacgcacgcacgcacacaca
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    71836 572 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=745.000000
s hg38.chr14_KI270722v1_random         171110 1 +    194050 t
s panTro4.chr14_AACZ03171041_random     17149 1 -     37130 c
i panTro4.chr14_AACZ03171041_random I 8 C 0
s nomLeu3.chr24                      27581435 1 -  28733288 c
i nomLeu3.chr24                     I 4 C 0
s macFas5.chr5_KE145639_random          30732 1 +     87690 t
i macFas5.chr5_KE145639_random      I 4 C 0
s papAnu2.JH684932                     194758 1 -    231459 t
i papAnu2.JH684932                  I 4 C 0
s chlSab2.chr20                     130537205 1 + 130588469 t
i chlSab2.chr20                     I 4 C 0
s rhiRox1.KN297764v1                    72408 1 +    492427 t
i rhiRox1.KN297764v1                I 572 I 93
s calJac3.chr1                      174274917 1 + 210400635 c
i calJac3.chr1                      C 0 C 0
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=167067.000000
s hg38.chr14_KI270722v1_random         171111 99 +    194050 tccagtaaaggtagatatgaaactctaaaactgatatattttatattatgaaaataataaaaggcagtataaatgcacatttttctatttttttctctg
s panTro4.chr14_AACZ03171041_random     17150 98 -     37130 accagtaaaggtaaatatgaaactctaaaactaatatattttatattatgaaaataataaaaggcagcataaatgcacatttttcta-ttttttctctg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27581436 98 -  28733288 accagtaaaggtaaatatgaaactctaaaactaatatattttatattatgaaaataataaaaggcagtataaatgcacatttttcta-ttttttctctt
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30733 98 +     87690 accagtaaaggtaaacatgaaactctaaaactaatatattttatattatgaaaagaataaaaggcagtataaatgcacatttttcta-ttttttctctt
i macFas5.chr5_KE145639_random      C 0 I 4
s papAnu2.JH684932                     194759 92 -    231459 accagTAAAGGTAAACATGAAact------ctaatatattttatattatgaaaagaataaaaggcagtataaatgcacatttttcta-ttttttctctt
i papAnu2.JH684932                  C 0 I 4
s chlSab2.chr20                     130537206 98 + 130588469 accagtaaaggtaaacatgaaactctaaaactaatatattttatattatgaaaagaataaaaggcagtataaatgcacaattttcta-ttttttctctt
i chlSab2.chr20                     C 0 I 4
s calJac3.chr1                      174274918 98 + 210400635 accagtaaaggtaaatatgaaactataaaactaatatattttatattatgaaaataataaaaggcaatataaatgcatatttttcta-atttttctctt
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72409 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=1883.000000
s hg38.chr14_KI270722v1_random         171210 1 +    194050 g
s panTro4.chr14_AACZ03171041_random     17248 1 -     37130 g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27581534 1 -  28733288 g
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30835 1 +     87690 g
i macFas5.chr5_KE145639_random      I 4 C 0
s papAnu2.JH684932                     194855 1 -    231459 g
i papAnu2.JH684932                  I 4 C 0
s chlSab2.chr20                     130537308 1 + 130588469 g
i chlSab2.chr20                     I 4 C 0
s rhiRox1.KN297764v1                    72502 1 +    492427 a
i rhiRox1.KN297764v1                I 93 n 93
s calJac3.chr1                      174275016 1 + 210400635 g
i calJac3.chr1                      C 0 C 0
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=507339.000000
s hg38.chr14_KI270722v1_random         171211 306 +    194050 atttagaaaacaattcataaaacaatgtctatctaatgtattgtttgtcctgtgacatacaaaatttaatatgtttgccaataa-----------------cagtctaaccgagatgagtgggaacaaagctgtattgggttaagacaacaactccatatatcacactacagacaactctagtctataaaaacaaatgaagaggaccataaatgataaataagaagattaacttaaaattttaaatatttatgtgc-tttactttttcctctcagcttcttaaaagatatggttatatgatgtaataattgtaacaatgtattg
s panTro4.chr14_AACZ03171041_random     17249 306 -     37130 attttgaaaacaatttataaaacaatgtctatttaatgtattgtttgtcctgtgacatacaaaatttaatatgtttgccaataa-----------------caatctaaccaagatgactgggaacaaagctgtattgggttaagacaacaactccatatatcacactacagacaactcgagtctataaaaacaaatgaagagaaccatagatgataaataataaggttaacttaaaattttaaatatttatgtgc-tttactttttcctctcagcttcttaaaagatatggttatatgatgcaataattgtaacaatgtattg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27581535 302 -  28733288 atttagaaagcaatttataaaacaatgtctattcaatgtattgtttgtcctgtgacatacaaaatttaatatgtttgccaataa-----------------tagtctaactcaggtgagtgggaacaaagctgtattgggttaagacaacaactccatatatcacactacagacaactcaaatctataaaaac----gaagagaatcataaatgataaataagaacgttaacttaaaattttaaatatttatgtgc-tttactttttcctctcaccttcttaaaagacatggttatatggtgtaataattgtaacaatgtattg
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          30836 306 +     87690 atttagaaagcaatttataaaacaatgtctgttcaatgtattgtttgtcctgtgacttacaaaatttaatatgtttgccaataa-----------------cagtctaaccgaggtgagtgggaacaaagctgtattgggttaagacaacgactccatatatcagactacacacgactcaaatctgtaaaaacaaatgaagagaatcataaatgatacataagaaggttgacttaaaattttaaatatttatgtgc-tttactatttcctctcagcttcttaaaagacatggttatacgaagtaatagttataacagtgtattg
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     194856 305 -    231459 atttagaaagcaatttataaaacaatgtctGTTCAATGTATTGTTTGTCCTGTGACTTACAAAATTTAATATGTTTGCCAATAA-----------------CAGTCTAACCGAGGTGAGTGGGAACAAAGCTGTATTGGGTTAAGACAACGACTCCATATATCAGACTACAGACGACTC-AATctgtaaaaacaaatgaagagaatcataaatgataaataagaaggttgacttaaaattttaaatatttatgtgc-tTTACTATTTCCTCTCAGCTTCTTAAAAGACATGGTTATACGAAGTAATAGTTATAACAATGTATTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130537309 306 + 130588469 atttagaaagcaatttataaaacaatgtctgttcaatgtattgtttgtcctgtgacttacaaaatttagtatgtttgccaataa-----------------cagtctaaccgaggtgagtgggaacaaagctgtattgggttaagacaacgactccatatatcagactacagacgactcaaatctggaaaaacaaatgaagagaatcataaatgataaacaagaaggttaacttaaaattttaaatatttatgtgc-tttactatttcctctcagcttcttaaaagacatggttatacgaagtaatagttctaacaatgtattg
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174275017 323 + 210400635 agttagaaagcaatttataaaacaatgtctatccaatgtattgcttatcctgtgatataaaaaatttaatatgtttgccaataagatatcacaggacaaacaactctaactgaggtgagcgggaacaaagctgtattgggttaagacaacaacttcgtatatcagactacagacaatgcaaatccataaaaccaaatgaggagaatcataaatgataaataag-aggttaacttaaaattttaaatatttatgtgcttttccttttttctctcagcttcttcaaagacatagttatgtgaagtaataattataacaatgtattg
i calJac3.chr1                      C 0 I 590
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=536950.000000
s hg38.chr14_KI270722v1_random         171517 445 +    194050 ttgaatttttagtatttattgatgtaacataaataagaataataccttaaaaaggtacagtaagaagggtatagaactacatatggtacaaagctatgtgcagaagggtgtgaagcaaggtaggtgtaatgtttttgtgtctaaatgaaactattctgaattagcatgaatctgaagctgattctgataggttaagatgtataatgtaagcccaagaa-actgactaggataataagccaaaaatggagtactaaaatcattaaagaaatgtaattgccattttagaaaatattcactgttgccgggcgcagtggctcacacctgtaatcccaggactttgggaggctgaggt---------gggtggatcatgaggtcaggagattgagaccatcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattatccaggtgtggt
s panTro4.chr14_AACZ03171041_random     17555 445 -     37130 ttgagtttttagtatttatagatgtaatataaataagaataataccttaaaaacgtacattaagaagggtatagaactacatagggtacaaagctatgtgcagaagggtgtgaagcaaggtaggggtaatgtttttgtgtctaactgaaactattctgaattagcatgaatctgaagctgattctgataggttaagatgtataatgtaagcccaagaa-actgactatgataataagtcaaaaatacagtactaaaatcattaaagaaatgtaattgtcattttagaaaatattcactgttgccgggtgcagtggctcacacctgtaatcccagcactttgggaggctgaggt---------gggtggatcatgaggtcaagagattgagaccatcctggccaacatggtgaaatcccatctctactaaaaatacaaaaattatccaggcgtggt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27581837 438 -  28733288 ttgagtgtttagtatttacagatgtaacataaataagaataataccttaaaaaggtacagtaagaagggtatagaactacagagggtatgaagctatatgcagaatggtgtggagcaaggtagggctaatgtttctgtgtctaactgaaactattctgaattaggatgaatctgaagctgattctgataggttaagatgtataatgtaggcccaagaacactgactgggataataaggcaaaaatagggttctaaaatcattaaagaaatataattgtcattttagaaaatattcactgttgcggggcgcagt--------cctgtaatcccagcactttgggaggccaaggt---------gggtggatcatgaggtcaagaaattgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattatccgggcgtggt
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          31142 455 +     87690 ttgagtttttagtatttatagatgtaatataaataagaataataccttaaaaaggtacaataagaagggtatagaactacatagggtacaaagctatatgcagaagggcgtggagcaaggtagaggtaatgtttttgtgtctaactgaaactgttctgaattagcatgaatctgaagctgattctgataggttaaaatgtataatgtaagcccaagaacactgactagcataataagccaaaaatagagtactaaaatcattaaagaaatgtaattgtcattttagaaaatactcactGTTgccaggtgtggtggctcacgcctgtaatcctagcactttgggaggccaaggcgggtgtatcgggtgtatcatgaggtcaagagatcaagatcatcctggcaaacatggtgaaacccctcttctactaaaaatacaaaaattagccaggcacggt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     195161 454 -    231459 TTGAGTTTTTAGTATTTATAGATgtaatataaataagaataataccTTAAAAAGGTACAATAAGAAGGGTATAGAACTACATAGGGTACAAAGCTATATGCAGAAGGGCGTGGAGCAAGGTAGAGGTAATGTTTTTGTGTCTAACTGAAACTGTTCTGAATTAGCATGAA-CTGAAGCTGATTCTGATAGGTTAAAATGTATAATGTAAGCCCAAGAACACTGACTAGCATAATAAGCCAAAAATAGAGTActaaaatcattaaagaaatgtaattgtcattttagaaaatactcactgttgccaggtgtggtggctcacgcctgtaatcctagcactttgggaggccaaggtgggtctatcgggtgtatcatgaggtcaagagatcaagatcatcctggcaaacatggtgaaaccccgcctctactaaaaatacaaaaattagccgggcacggt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130537615 452 + 130588469 ttgagtttttagtatttatagatgtaatataaataagaataataccttaaaaaggtacaataagaaggggatagaactacatagggtacaaagctatatgcagaagggcgtggaa-aaggtagaggtaatgtttt--tgtctaacggaaactgttctgaattagcatgaatctgaagctgattctgataggttaaaatgtataatgtaagcctaagaacactgactagcataataagccaaaaatagagtactaaaatcattaaagaaatgtaattgtcattttagaaaatactcactGTTgccaggtgtggtggctcacgcctgtaatcctagcactttgggaggccaaggcgggtgtatcgggtgtatcatgaggtcaagagatcaagatcatcctggcaaacatggtgaaacgccgcctctactaaaaatacaaaaattagccgggcacggt
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e calJac3.chr1                      174275340 590 + 210400635 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=219045.000000
s hg38.chr14_KI270722v1_random         171962 144 +    194050 ggcgggcacctgcagtcccagctactcaggaagctgaggcaagagaatcccttgaacctgggaggcagaggttgcagtgagccgagattgcaccact------gcac-tccagcct-ggcaacagagtgagactctgtctcaaaaaaaaaaa
s panTro4.chr14_AACZ03171041_random     18000 139 -     37130 ggcgggcacctgcagtcccagctactcaggaggctgaggcaagagaatcccttgaacctgggaggcagaagttgca-tgagccgagattgcaccact------gcac-tccagcct-ggcaacagagtgagactctgtctcaaaaaaa----
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64388292 145 +  72422247 ggcaggcaccttcagtctcagctactcaggaggctgaggcaggagaat--ctgaaaaatgggaggcagaggttgcagtgagccaagattgcaccatctataagacacatccagcct-ggcaacagagtgagactctgtctcaaaaaaa----
i ponAbe2.chrUn                     N 0 C 0
s nomLeu3.chr24                      27582275 144 -  28733288 ggtgggtgcctgtagtcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagattgtgccact------gcac-tccagcct-ggcaacagagtgagactctgtctcaaaaaaaaaaa
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          31597 145 +     87690 ggcaggcgcctgtagtcccagctacttgggaggctgaggcaggagaatgatgtgaacccgggaggcagagcttgcagtgaaccgagatcgcgccact------gcac-tccagcctgggcgacagagtgagactccgtctcaaaaaaaaaaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     195615 145 -    231459 ggcaggcacctgtagtcccagctacttgggaggctgaggcaggagaatgatgtgaacccgggaggcagagcttgcagtgaaccgagattgtgccact------gcac-tccagcctgggcgacagagtgagactccgtctcaaaaaaaaaaa
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130538067 145 + 130588469 ggcaggcacctgtagtcccagctacttgggaggctgaggcaggagaatgatgtgaacccgggaggcagagcttgcagtgaaccgagatcacgccact------gcac-tccagcctgggcgacagagtgagactccgtctcaaaaaaaaaaa
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e calJac3.chr1                      174275340 590 + 210400635 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=546.000000
s hg38.chr14_KI270722v1_random         172106 1 +    194050 a
s nomLeu3.chr24                      27582419 1 -  28733288 a
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          31742 1 +     87690 a
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     195760 1 -    231459 a
i papAnu2.JH684932                  C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e calJac3.chr1                      174275340 590 + 210400635 I
e ponAbe2.chrUn                      64388437 0 +  72422247 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e panTro4.chr14_AACZ03171041_random     18139 0 -     37130 C
e chlSab2.chr20                     130538212 0 + 130588469 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=546.000000
s hg38.chr14_KI270722v1_random         172107 2 +    194050 aa
s nomLeu3.chr24                      27582420 2 -  28733288 aa
i nomLeu3.chr24                     C 0 C 0
s papAnu2.JH684932                     195761 2 -    231459 aa
i papAnu2.JH684932                  C 0 I 1234
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e calJac3.chr1                      174275340 590 + 210400635 I
e ponAbe2.chrUn                      64388437 0 +  72422247 C
e otoGar3.GL873608                    1956334 185 -   8296746 I
e panTro4.chr14_AACZ03171041_random     18139 0 -     37130 C
e chlSab2.chr20                     130538212 0 + 130588469 C
e macFas5.chr5_KE145639_random          31743 0 +     87690 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=1272.000000
s hg38.chr14_KI270722v1_random         172109 6 +    194050 agaaaa
s panTro4.chr14_AACZ03171041_random     18139 4 -     37130 --gaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64388437 4 +  72422247 --aaaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27582422 4 -  28733288 --aaga
i nomLeu3.chr24                     C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e calJac3.chr1                      174275340 590 + 210400635 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130538212 0 + 130588469 C
e papAnu2.JH684932                     195763 1234 -    231459 I
e macFas5.chr5_KE145639_random          31743 0 +     87690 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=140272.000000
s hg38.chr14_KI270722v1_random         172115 175 +    194050 agaaaatattcactgtttgcaaaaggaagcagaaaacagg-actgaagaattaaaaggacatacgaggaataaaaaacaaaaattaaatgtctgatatg-atccaactatatcaataataatattaaatatgacttgattaaacaacctaatcaaaagttaattcttgtcagacaat
s panTro4.chr14_AACZ03171041_random     18143 175 -     37130 agaaaatattcactgtttgcaaaaggaagcagaaaacagg-actgaagagttaaaaggacatatgaggaataaaaaacaaaaattaaatgtctgatatg-atccaactatatcaataataatattaaatatgacttgattaaacaacctaatcaaaagttaattcttgtcagacaat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64388441 175 +  72422247 aggaaaTATTCACTGTTTGcaaaaggaagcagaaaacagg-actgaggaattaaaaggacatatgaagaataaaaaacaaaaattaaatgtctgatatg-atccaactatatcaataataatattaaatataacttgattaaacaaactaatcaaaagttaattcttgtcagacaat
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27582426 175 -  28733288 aaaaaatatttg-tgtttgcaaaaagaagcagaaaacagg-actgaagatttaaaaggacatatgaggaataaaaaacaaaaattaaatgtctgatatgaatccaactatatcaataataatattaaatatgacttgattaaacaacctaatcaaaagtcaattcttgtcagacaat
i nomLeu3.chr24                     C 0 C 0
s calJac3.chr1                      174275930 176 + 210400635 agaaaatattcgctgtttgcaaaaggaagcagaaaacaggaactgaagaatgaaaaggacatatgaggaataaaaaacaaaaatgaaatttcagacatgaatccaact-tatcaataataatcttaaatgcaaattgattaaacaacctaatcaaaagttaattcctgtcagacaat
i calJac3.chr1                      I 590 C 0
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130538212   0 + 130588469 C
e papAnu2.JH684932                     195763 1234 -    231459 I
e macFas5.chr5_KE145639_random          31743   0 +     87690 C
e rheMac3.chr1                      225508444 1637 - 229590362 I

a score=6950.000000
s hg38.chr14_KI270722v1_random         172290 7 +    194050 aaaaaat
s panTro4.chr14_AACZ03171041_random     18318 7 -     37130 aaaaaat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64388616 7 +  72422247 aaaaaat
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27582601 7 -  28733288 aaaaaat
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510081 6 - 229590362 aaaaaa-
i rheMac3.chr1                      I 1637 C 0
s calJac3.chr1                      174276106 7 + 210400635 aaaaaat
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130538212 0 + 130588469 C
e papAnu2.JH684932                     195763 1234 -    231459 I
e macFas5.chr5_KE145639_random          31743 0 +     87690 C

a score=5922.000000
s hg38.chr14_KI270722v1_random         172297 3 +    194050 aag
s panTro4.chr14_AACZ03171041_random     18325 3 -     37130 aag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64388623 3 +  72422247 aag
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27582608 3 -  28733288 aag
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510087 3 - 229590362 aaG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          31743 3 +     87690 aaG
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174276113 3 + 210400635 aag
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130538212 0 + 130588469 C
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=872400.000000
s hg38.chr14_KI270722v1_random         172300 430 +    194050 atcctctatgccatctactagagtaacattttagattcaaagatataaatagagtaaaaagatgtaaatacatatattatgcaaacagaaaccctgataaagctattctaaagcagccatactaatatcagacacaatgaa--ttaaaaaa----aaaaa----ctgaccaggtgcaatggttcatgcctgtaatcccaggactttgagtagccaaggtgggcggatcacctcagttcaggaattctagaccagcc-ggcaaagatggtggaaccccatctctactaaaaatacaaaaattagttgggtgtggtggcatgtgcgtataatcccagctactcaggaggcagaggcaggagaattgcttgaaactgggaggtggaggttgagttaaagttatattatttcctcagtgagctgagatcacgccattgcatgcca
s panTro4.chr14_AACZ03171041_random     18328 437 -     37130 atcctctatgccatctaccagagtaacattttagattcaaagatataaatagagtaaaaggatggaaatacatatattatgcaaacagaaaccctgagaaatctattctaaagtagctatactaatattggacacaatgacttttaaaaca----aaaaataatctgaccaggtgcagtggctcatgcctgtaatcccaggagttcgagaagccaaggtgggcagatcacctgagttcaggagttctagaccagcctggccaagatggtggaactccgtctctactaaaaatacaaaaattagttgggtgtgatggcatgtgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaaactgggaggtggaggttgagtgaaagttatattatttcctcagtgagctgagatcacgccattgcatgcca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64388626 441 +  72422247 atcctctatgccacgtaccagagtaacattttagattcaaagacataaatagagtaaaaggatggaaatacacatatcatgcaaacagaaaccctgagaaagctattctaaagtagctatactaatatcagacacgatgaattttaaaacaaaacaaaaaaaaactgaccaggtgcagtggctcatgcctgtaatcccaggactttgagaggccaaggtgggcagatcacctgaggtcaggagttctagaccagcctggccaagatggtggaaccccgtctctactaaaaatacaaaaattagttggttgtggtggcatgtgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaaactgggaggtggaggttgagtgaaagttatgttatttcctcagtgagctgagatcatgccattgcatgcca
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27582611 434 -  28733288 atcctctatgccatctaccagagtaacattttagattcaaagatataaatagagtgaaaggatggaaacgcatatattattcaaacagaaaccctgagaaagctattctaaagtagctatactaatatcagatacaatggattttaaaaca----aaaaa--aattgaccaggtgcaatggctcatgcctgtaatcccaggactttgagaggccaaggtgggtggatcacctgaggtcagaagttctagaccagcctggccaagatggggaacccccgtctctactaaaaatat-aaaattagttgggtgtggtggcatgtgcctataatcccagctactcaggaggctgaggcaggaggatcgcttgaaactgggaagtggaggttgagtgaaagttatgttatttcctcagtgagctgatatcacgccattgcatgcca
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510090 412 - 229590362 ATCATCtacaccatctaccagagtaacattttagattcaaagatataaatagagtaaaaagatggaaatacatatatcatgcaaacagaaaccctgagaaagctattctaaggtagttatactaatatcagacacaatgaattttaaaaca----aaaaa--aattgaccaggtgcggtggctcttg-ctgtaatcccaggactttgggaggccaaggtgggcagatcacctgaggtcaggagttctagaccagcctggccaacatggtagaatcccgtctctactaaaaatataaaaattagctgggcgtggtggcatgtgccaataatcccagctactcaggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggcag----------------------cagttagctgagatcacgccattgcaaatta
i rheMac3.chr1                      C 0 I 14
s macFas5.chr5_KE145639_random          31746 408 +     87690 ATCATCtatgccatctaccagagtaacattttagattcaaagatataaatagagtaaaaagatggaaatacatatatcatgcaaacagaaaccctgagaaagctattctaaggtagttatactaatatcagacacaatgaattttaaaaca----aaaaa--aattgaccaggtgcggtggctcatgcctgtaatcccaggactttgggaggccaaggtgggcagatcacctgaggtcaggagttctagaccagtctggccaacatggtagaatcccgtctctactaaaaatataaaaattagctgggcgtggtggcatgtgccaataatcccagctactcaggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggtag----------------------cagtgagctgagatcacaccattgca-----
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538212 413 + 130588469 aTCATCtatgccatctaccagagtaacattttagattcaaagatataaatagagtaaaaagatggaaatacatatatcgtgcaaacagaaaccctgagaaaactattctaaggtagttatactaatatcagacacaatgaattttaaaaca----aaaaa--aattgaccaggtgcggtggctcatgcctgtaatcccaggactttgggaggccaaggtgggcagatcacctgagatcaggagttctagaccagcctggccaacatggtagaatcccgtctctactaaaaatataaaaattagctgggcgtggtggcatgtgccaataatcccagctactcaggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggtag----------------------cagtgagctgagatcacgccattgcaaatta
i chlSab2.chr20                     C 0 I 14
s calJac3.chr1                      174276116 402 + 210400635 atcctttatgctatccacaggagtaccattttagattcaaagat-taaatagaatcaaaggatggaaatgcatatatcaggcaaagaaaaaccctgagaaagctatgctaaagtagctatactgatatcagacaaaatgaattttaaaaca----aaaaa---attggccgggcacggtggttcacgcttgtaatctcagcactttgggaggcagaagtaggcagatcacgtgaggtcatgagttctagaccagcctggccaacatggtgaaacccc-tctctactaaaaatacaaaaattaggtg--------ggcatgtgcctataatcccagatactcaggaggctggggcaggaaaatctcttgagcctaggaggtggaggttg----------------------caatgagctgagatcacatcactacactcca
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=11936.000000
s hg38.chr14_KI270722v1_random         172730 30 +    194050 gcctgggtgacaagagagaaactctgtct---------t
s panTro4.chr14_AACZ03171041_random     18765 31 -     37130 gcctgagtgacaagagagaaactctgtct--------aa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389067 39 +  72422247 gcctgggcgacaagagagaaactctgtctaaaaaaaaaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583045 32 -  28733288 gcctgggcgacaagagagaaactatgtct-------aaa
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          32154 16 +     87690 -----aattataaaaaaaaag------------------
i macFas5.chr5_KE145639_random      C 0 C 0
s calJac3.chr1                      174276518 30 + 210400635 gcctgtacgacaagggagaaactccatttc---------
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e chlSab2.chr20                     130538625 14 + 130588469 I
e papAnu2.JH684932                     195763 1234 -    231459 I
e rheMac3.chr1                      225510502 14 - 229590362 I

a score=1911.000000
s hg38.chr14_KI270722v1_random         172760 1 +    194050 a
s panTro4.chr14_AACZ03171041_random     18796 1 -     37130 a
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389106 1 +  72422247 a
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583077 1 -  28733288 a
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          32170 1 +     87690 a
i macFas5.chr5_KE145639_random      C 0 I 1
s chlSab2.chr20                     130538639 1 + 130588469 a
i chlSab2.chr20                     I 14 C 0
s calJac3.chr1                      174276548 1 + 210400635 a
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I
e rheMac3.chr1                      225510502 14 - 229590362 I

a score=311701.000000
s hg38.chr14_KI270722v1_random         172761 156 +    194050 aaaaaaaattttgtttttagagataatgtgggatattttacaata-----ataaaatggccaatccatcagaaagaaagaaagcacaagtataaacatatatgcacctaattaaacatcaccaaagtacatgaaacaaaaactgacagaaatgacagttaa
s panTro4.chr14_AACZ03171041_random     18797 156 -     37130 aaaaaaaaaattgtttttagagataatgtgggatattttacaata-----ataaaatgaccaatccatcagaaagaaagaaagcacaagtataaacatatatgtacccaattaaacatcaccaaagtacatgaaacaaaaactgacagaaatgacagccaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389107 156 +  72422247 aaaaaaaaatttatttttagagataatctgagatattttacaata-----ataaaatggccaatccatcagtaagaaagaaagcacaagtataaacgtatatgcatccaattaaacatcaccaaagtacatgaaacaaaaattgacagaaacgacagtcaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583078 152 -  28733288 aaaaccatttttgtttttagagataatgtgggacattttacagta-----ataaaattgccaatccatcagt----aagaaagtacaagtataaacatacatgcacccaattaaacatcaccaaagtacatgaaacaaaaactgacagaaattacagtcaa
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510516 154 - 229590362 aaaaaactttttttttttagagataatgtgggacattttacaataataaaataaaatggccaactcatcagt----aagaaagtacaagtataaacatatatgcacccaattaaacatcaccaaagtacatgaaacaaaaactgacag-aatg--agtcaa
i rheMac3.chr1                      I 14 C 0
s macFas5.chr5_KE145639_random          32172 155 +     87690 aaaaaaattttttttttaagagataatttgggacattttacaataataacataaaatggccaactcatcagt----aagaaagtacaagtataaacatatatgcacccaattaaacatcaccaaagtacatgaaacaaaaactgacagaaatg--agtcaa
i macFas5.chr5_KE145639_random      I 1 C 0
s chlSab2.chr20                     130538640 155 + 130588469 aaaattttttttttttttagagataatgtgggacattttacaataataaaataaaatggtcaactcatcagt----aagaaagtacaagtataaacatatatgcacccaattaaacatcaccaaagtacgtgaaacaaaaactgacagaaatg--agtcaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174276549 150 + 210400635 --aaaacaatttttttttagagatactgtgggacattttacaata-----ataaaatggtcaatccatcagc----aagaaagtacaagtataaacatatatgcacccaattaaacatcaccaaggtatatgaaacaaaaactgatggaaatgacagtcaa
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=19980.000000
s hg38.chr14_KI270722v1_random         172917 6 +    194050 aattga
s panTro4.chr14_AACZ03171041_random     18953 6 -     37130 aattga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389263 6 +  72422247 aattga
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583230 6 -  28733288 aattga
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510670 6 - 229590362 aattga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32327 6 +     87690 aattga
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538795 6 + 130588469 aattga
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174276699 6 + 210400635 aattga
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                37195 6 -     43889 aattga
i micMur1.scaffold_18511            N 0 I 153
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=226422.000000
s hg38.chr14_KI270722v1_random         172923 132 +    194050 tgatgagtggagacttcaatactgcactttgactaatggatagaaaaac--tgcagaagagcaacagggaaacagaagactcaaacaacttcatagtccagctagacctgaaaagcacacgcaaaacattccac
s panTro4.chr14_AACZ03171041_random     18959 134 -     37130 tgatgagtggagacttcaatactgcactttgactaatggatagaaaaactatgcagaagagcaacaaggaaacagaagactcaaacaacttcatagtccagctagacctgaaaaacacatgcaaaacattccac
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389269 134 +  72422247 tgatgactggagacttcaatactgcaatttaactaacggatagaaaaactatgcagaagagcaacaaggaaacagaagactcaaacaacttcatagtccaactagacctgaaaaacacgcacaaaacattccat
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583236 130 -  28733288 tgatgactggagacttcaataatgcactttgactaatggatagaaaaactatgcagaagagcaacatggaaacagaagact----caacttcatagtccaactagacctgaaaaacacatgcaaaacattccac
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510676 101 - 229590362 tgatgactggagacttcaatattgcatttccactaatgaatagaaaaaccat---------------------------------caacttcatagttcaactagacctgaaaaacacgtgcaaaacattccac
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32333 101 +     87690 tgatgactggagacttcaatattgcatttccactaatggatagaaaaaccat---------------------------------caacttcatagttcaactagacctgaaaaacacatgcaaaacattccac
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538801 101 + 130588469 tgatgactggagacttcaatattgcatttccactaatggatagaaaaaccat---------------------------------caacttcatagttcaaccagacctgaaaaacacgtgcaaaacattccac
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174276705 133 + 210400635 tgatggctgggaacttccatactccactttgactaatggatagaaaagctaggcagaagagcaacaaggaaacagaagactcaaacagcttcatagtcca-ccagatctgaaaaacacatgcaaaacattccac
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503  93 +    492427 I
e micMur1.scaffold_18511                37201 153 -     43889 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=9104.000000
s hg38.chr14_KI270722v1_random         173055 3 +    194050 aca
s panTro4.chr14_AACZ03171041_random     19093 3 -     37130 aca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389403 3 +  72422247 aca
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583366 3 -  28733288 aca
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510777 3 - 229590362 aca
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32434 3 +     87690 aca
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538902 3 + 130588469 aca
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174276838 3 + 210400635 aca
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                37354 3 -     43889 ata
i micMur1.scaffold_18511            I 153 I 934
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=2548.000000
s hg38.chr14_KI270722v1_random         173058 1 +    194050 a
s panTro4.chr14_AACZ03171041_random     19096 1 -     37130 a
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389406 1 +  72422247 a
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583369 1 -  28733288 a
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510780 1 - 229590362 a
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32437 1 +     87690 a
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538905 1 + 130588469 a
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174276841 1 + 210400635 a
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                    72503 93 +    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=9104.000000
s hg38.chr14_KI270722v1_random         173059 3 +    194050 caa
s panTro4.chr14_AACZ03171041_random     19097 3 -     37130 caa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389407 3 +  72422247 caa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583370 3 -  28733288 caa
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510781 3 - 229590362 caa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32438 3 +     87690 caa
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538906 3 + 130588469 caa
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   421349 3 -    492427 taa
i rhiRox1.KN297764v1                I 1524 I 1202
s calJac3.chr1                      174276842 3 + 210400635 caa
i calJac3.chr1                      C 0 I 3
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=489213.000000
s hg38.chr14_KI270722v1_random         173062 224 +    194050 gagaagctacattcttctcaagggctcatcaacattgtccatcatagactctacactaggccattaaaggaactgaacagtatgtactccaatcacaatagagtgaaactagaagttaataacaaaaaagtagggaaacccaaatacgtggatattaaacaacacacatccaaattactaatcaaagaagaaatcaaaacagaaatttgaaaatatacttaaag
s panTro4.chr14_AACZ03171041_random     19100 224 -     37130 gagaagctacattcttctcaagggctcatcaacattgtccatcatagactctacactaggccattaaaggaactgaacagcatgtactgcaatcacaatagagtgaaactagaagttaataacaaaaaagtagggaaacccaaatacgtggatattaaacaacacacatccaaattactaatcaaagaagaaatcaaaacagaaatttgaaaatatacttagag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389410 222 +  72422247 gagaagctacattcttctcaagggctcatcaacattgtccctcatagactctacactaggccattaaaggaactgaacaacatgtactccaatcacaatagagtgaaactaggaattaataagaaaaaagtagggaaactcaaatacatggatattaaaca--acacatccaaattactaatcaaagaagaaatcaagacagaaatttgaaaatatacttagag
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583373 218 -  28733288 gagaagctacatttttctcaagggctcatcaacactgtccatcatagactctacactaggtcattgaaggaactgaacagcatgtactccaatcacaatagagtgaacctagaaattaataacaaaaaagtagggaaactcaaatatgtgaaaattaaacaacacacatccaaattactaatcaaagaagaaatcaaaacagaaatttgaaaa------tagag
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225510784 220 - 229590362 aagaagctacattcttctcaaaggctcattaacattgtccatcatagactctacactaagccattaaaggaactgaacagcatgtaccctagtcacaatagagcgaacctagcaattaataacaaaaaagtagggaaactcaaatatgtggaaattaa----cacacatccaaattattaatcaaaggagaaatcaaaacagaaatttgaaaatatactgagag
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32441 220 +     87690 aagaagctacattcttctcaaaggctcattaacattgtccatcatagattctacactaagccattaaaggaactgaacagcatgtaccccagtcacaatagagcgaacctagcaattaataacaaaaaagtagggaaactcaaatatgtggaaattaa----cacacatccaaattattaatcaaaggagaaatcaaaacagaaatttgaaaatatactgagag
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130538909 220 + 130588469 aagaagctacattcttctcaaaggcttattaacattgtccatcatagactctacgctaagccattaaaggaactgaacagcatgtggcccagtcacaatagagcgaacctagcaattaataacaaaaaagtagggaaactcaaatatgtggaaattaa----tacacatccaaattattaatcaaaggagaaatcaaaacagaaatttgaaaatatactgagag
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174276848 224 + 210400635 gagaaggtacattcttctcaaggacgcatcaacattgtccatcatagactctacgctaagccattaaaggaactgaacagcacctactccaatcacaacagagtgagcctagaaattaatatcaaaaaagtgaagaaactcaaatatgtggaaattaaacagcacacgcccaaattactagccaaagaagaaatcaaaacagaaatttgaatatatacttagag
i calJac3.chr1                      I 3 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873608                    1956334 185 -   8296746 I
e papAnu2.JH684932                     195763 1234 -    231459 I

a score=954401.000000
s hg38.chr14_KI270722v1_random         173286 334 +    194050 gaatgaaaatgaagtcacaacatacaaaacttaatgaaattcaattagagacatgcttacaaggaaatttattgctgtaaatacagataataaaaa-agagaactatttcaaatcaacaacataacttttgacataaggacacagggaaaaggagagcaaatggaagctaaagtaagcagaaggaaggaaataataaagatcatagcagaaaccaatgagacagagactagaaaagcaatagagaaaaacaatgaaaccagaagcacattcaaacaagcctaacacaattgacaaaccttATTGTCATGAAAATGTATTTTGGGTATACAACCAA
s panTro4.chr14_AACZ03171041_random     19324 334 -     37130 gaatgaaaatgaagtcacaacatacaaaacttaatgaaagacaattagagacatgcttacaaggaaatttattgctgtaaatacagataataaaaa-agagaactatttcaaatcaatgacataacttttgacataaggacactgggaaaaggagaggaaatggaagctaaagtaagcagaaggaaggaaataataaagatcatagcagtaaccaatgaaacagagactagaaaagcaatagagaaaaacaatgaaaccagaagcacattcaaacaagcctaacacaactgacaaaccttATTGTCATGAAAATGAATTTTGGGTATACGACCAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389632 334 +  72422247 gaatgaaaatgaagtcacaacatacaaaacttaatgaaagacaattagagacatgcttacaaggaaatttattgctgtaaatacagataacaaaaa-agagaaatatttcaaatcaataacataacttttgacataaggacactgggaaaagaagagaaaatggaagctaaagtaagcagaaggaaggaaataataaagatcatagcagaaaccaatgaaacagagaatagaaaagcaatagagaaaaacaatgaaaccagaagcacattcaaacaagcttaacacaattgacaaaccttATTGTCATGAAAATGTATTCTGGGTATACGACCAA
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583591 332 -  28733288 gaatgaaaatgaagtcacaacatacaaaacttaatgaaaggcaattagagacatgcttacagggaaatttattgctgtaaatacagataataaaaa---agaactatttcaaatcaataacataacttttgacataaggacactggaaaaagaagagcaaatggaagctaaagtaagcagaaggaaggagataataaagatcatagcagaaaccaatgaaacagagaatagaaaagcaatagagaaaaacaatgaaaccaaaagcacattcaaacaagcttaacacaattgacaaaccttATTGTCATGAAAATGTATTTTGGGTATAGGACCAA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511004 334 - 229590362 gaatgaaaaggaattcacaacatacaaaacttaatgaaagacaattagagacatgcttacagggaaatttattgctgtaaatacctataataaaaa-agagaactatttcaaatcaataacataacttgcaacctaaggacactggaaaaagaacagcaaatagaagctaaggtaagcagaaggaaggaaataataaagatcatagcagaaaccaatgaaacagagaatagaaaagcaatggagaaaaacaatgaaaccaaaagcacattcaaaccagcttaacacaattgacaaaccttATTGTCATGAAAACGTATTTTGGGTATACGAACAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32661 334 +     87690 gaatgaaaaggaattcacaacatacaaaacttaatgaaagacaattagagacatgcttacagggaaatttattgctgtaaatacctataataaaaa-agagaactatttcaaatcaataacataactttcaacctaaggacactggaaaaagaacagcaaatagaagctaaagtaagcagaaggaaggaaataataaagatcatagcagaaaccaatgaaacagagaatagaaaagcaatgtagaaaaacaatgaaaccaaaagcacattcaaaccagcttaacacaattgacaaaccttATTGTCATGAAAACGTATTTTGGGTATACGAACAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     196997 332 -    231459 gaacaagaatcaatatacaaaaaaaaaaaaaaaaaaaaagacaattagagACATGCTTACAGGGAAATTTATTGCTGTAAATacctataataaaaa-agagaactaTTTCAAATCAATAACATAACTTTCAACCTAAGGACACTGGAAAAAGAGCAGCAAATAGAAGCTAAagtaagcagaaggaaggaaataataaagatcatagcagaaaccaatgaaacagagaatagaaaagcaatggagaaaaacaatgaaaccaaaagcacaTTCAAACCAGCTTAACACAATTGACAAA--TTATTgtcatgaaaatgtattttgggTATACGAACAA
i papAnu2.JH684932                  I 1234 C 0
s chlSab2.chr20                     130539129 332 + 130588469 gaatgaaaaggaagtcacaacatacaaaacttaatgaaagacaattagagacatgcttacagggaaatttattactgtaaatatctataataaaaa---agaactatttcaaatcaataacataactttcaacctaaggacactggaaaaagaacagcaaatagaagctaaagtaagcagaaggaaggaaataataaagattatagcagaaaccaatgaaacagagaatagaaaagcaatggagaaaaacaatgaaaccaaaagcacattcaaaccagcttaacacaattgacaaaccttATTGTCATGAAAACGTATTTTGGGTATACAAACAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277072 328 + 210400635 aaatgaaaatgaagtcacaacatacaaaacttaatgaaagacaatcagagccatgcttacagggaaatttattgctgtaaatacatgtaataaaaaaagaaaaagatttcaaatcaataacataacttttgacct---gacactggaaaaagaagagcaaatggaagctaaagtaagcag-aggaaggaaataataaagatcacatcagagaccagtgaaac--agaatagaaaagcagtagagaaaaacagcgaaaccaaaagcagattcaaacaagcttaaca-aattgacaaaccttATTGTCATGAAAATGTATTTCGGGTCCATGACTAA
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=255369.000000
s hg38.chr14_KI270722v1_random         173620 77 +    194050 GAAGTAGTGAGTTGTAGGACACAGGAACTGGAGGACCAAGATAACTGCTGTTGCTAGGATCATC-CCCCTGCATCCCC
s panTro4.chr14_AACZ03171041_random     19658 77 -     37130 GATGTAGTGAGTTGTAGGACACAGGAACTGGAGGACCAAGATAACTGCTGTTGCTAGGATCATC-CCCCTGCATCCCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64389966 77 +  72422247 GAAGTAGTGAGTTGTAGGACACAGGAACTGGAGGATCAAGATAACTGCTGTTGCTAGGAACATC-CACCTGCATCCCC
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27583923 77 -  28733288 GAAGTAGTAAGTTGTAGGACACAGGAACTGGAGGACCAAGGTAACTGCTGTTGTTGGGAACATC-CCCCTGCATCCCC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511338 78 - 229590362 GAAGTAGTGAGTTGAAGGACACGGGAACTGGAGGACCAAGATAACTGCTGTTGCTAGGAACATCCCCCCTGCATCCCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          32995 78 +     87690 GAAGTAGTGAGTTGAAGGACACGGGAACTGGAGGACCAAGATAACTGCTGTTGCTAGGAACATCTCCCCTGCATCCCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197329 77 -    231459 GAAGTAGTGAGTTGAAGGACACGGGAACTGGAGGACCAAGATAACTGCTGTTGCTAGGAACATC-CCCCTGCATCCCC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539461 78 + 130588469 GAAGTAGTGAGTTGAAGGACACGGGAACTGGAGGACCAAGATAACTGCTGTTGCTAGGAACATCCCCCCTGCATCCCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277400 78 + 210400635 GAAGTAGTGAGTTGTAGGACACAGTAACTGGAGGACCAGGATAACTGCTGTTGCTAGGAACATCTCCCCTGCTTTCCC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_137339.1-295073     157552 75 -    295073 GAGATAGT--GCTGCAGGAAGCAGTGACCCAAAAACCAAGATAAATGCTGCTATCCTGAGCATC-ATCCTCCATCCTC
i tupBel1.scaffold_137339.1-295073  N 0 I 9
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873608                    1956334 185 -   8296746 I

a score=2104.000000
s hg38.chr14_KI270722v1_random         173697 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     19735 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390043 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584000 1 -  28733288 T
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511416 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33073 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197406 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539539 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277478 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873668                    4655370 1 +   4854515 C
i otoGar3.GL873668                  n 185 I 33
s tupBel1.scaffold_137339.1-295073     157636 1 -    295073 C
i tupBel1.scaffold_137339.1-295073  I 9 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I

a score=115553.000000
s hg38.chr14_KI270722v1_random         173698 33 +    194050 CACC-TAAAAATGTTGACCAGATTGTAGGAAACC
s panTro4.chr14_AACZ03171041_random     19736 33 -     37130 CACC-TAAAAATGTTGACCAGATTGTAGGAAACC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390044 33 +  72422247 CACC-TAAAAATGTTGACCAGATTGTAAGAAACC
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584001 33 -  28733288 CACC-TAAAAATGCTGACCAGATTGTAGGAAACC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511417 33 - 229590362 CACC-TAAAAATGCTGACCAGATTGTAGGAAACC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33074 33 +     87690 CACC-TAAAAATGCTGACCAGATTGTAGGAAACC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197407 33 -    231459 CACC-TAAAAATGCGGACCAGATTGTAGGAAACC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539540 33 + 130588469 CACC-TAAAAATGCTGACCAGATTGTAGGAAACC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277479 34 + 210400635 CACCTTAAAAGTGTTGACCGGATTGCAGGAATCC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_137339.1-295073     157637 33 -    295073 CTCT-TGAAATTGTTGACTAGATTGTAGGGATCC
i tupBel1.scaffold_137339.1-295073  C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873668                    4655371 33 +   4854515 I

a score=14921.000000
s hg38.chr14_KI270722v1_random         173731 4 +    194050 CAAA
s panTro4.chr14_AACZ03171041_random     19769 4 -     37130 CGAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390077 4 +  72422247 TGAA
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584034 4 -  28733288 TGAA
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511450 4 - 229590362 CGAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33107 4 +     87690 CGAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197440 4 -    231459 CGAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539573 4 + 130588469 CGAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277513 4 + 210400635 CAAA
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873668                    4655404 4 +   4854515 CAAA
i otoGar3.GL873668                  I 33 I 72
s tupBel1.scaffold_137339.1-295073     157670 4 -    295073 CAAA
i tupBel1.scaffold_137339.1-295073  C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I

a score=162717.000000
s hg38.chr14_KI270722v1_random         173735 49 +    194050 CAATTCCTTTAAGGAGAAAGTAAATAAATTAAGAAAGCAATT-----TAGATGG
s panTro4.chr14_AACZ03171041_random     19773 49 -     37130 CAATTCCTTTAAGTATAAAGTAAATAAATTAAGAAAGCAATT-----TAGATGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390081 49 +  72422247 CAATTCCTTTAAGTAGAAAGCAAATAAATTAAGAAAGCAATT-----TAGATGG
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584038 49 -  28733288 CAATTCCTTTAAGTGGAAAGTAAATAAATTAGGAAAGCTATT-----TAGATGG
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511454 49 - 229590362 CAATTCCTTTAAGTAGAAAGTAAATACATTAAGAAAGCAATT-----TAAATGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33111 49 +     87690 CAATTCCTTTAAGTAGAAAGTAAATACATTAAGAAAGCAATT-----TAAATGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197444 49 -    231459 CAATTCCTTTAAgtagaaagtaaataaattaagaaagcaatt-----tagatgg
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539577 48 + 130588469 CAATTCCTTTAAGTAGAAAGTAAATAAATTAAGAAAGCAA-T-----TAAATGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277517 49 + 210400635 CAATTCCTTTAAGTAGAAAGTAAATAAATTAAGGAAGCAATT-----TAGATGG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_137339.1-295073     157674 47 -    295073 TAATCCCTTT-------AAGTAAATAGATTAAGAAAGCATTCATTCATAGATGG
i tupBel1.scaffold_137339.1-295073  C 0 I 180
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873668                    4655408 72 +   4854515 I

a score=16372.000000
s hg38.chr14_KI270722v1_random         173784 10 +    194050 C--T--TTTTTCTT
s panTro4.chr14_AACZ03171041_random     19822 11 -     37130 C-TT--TTTTTCTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390130 12 +  72422247 CTTT--TTTTTCTT
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584087 11 -  28733288 C-TT--TTTTTCTT
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511503 10 - 229590362 C-TT--TTTTTC-T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33160 10 +     87690 C-TT--TTTTTC-T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197493 11 -    231459 c-tt--tttttctt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539625 11 + 130588469 C-TT--TTTTTCTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277566 13 + 210400635 C-TTTATTTTTCTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_137339.1-295073     157901 10 -    295073 ----CATTTTTCTT
i tupBel1.scaffold_137339.1-295073  I 180 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873668                    4655408 72 +   4854515 I

a score=18676.000000
s hg38.chr14_KI270722v1_random         173794 7 +    194050 -TTTTCCC
s panTro4.chr14_AACZ03171041_random     19833 7 -     37130 -TTATCCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390142 7 +  72422247 -TTTTCCC
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584098 7 -  28733288 -TTTTCCC
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511513 7 - 229590362 -TTTTCCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33170 7 +     87690 -TTTCCCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197504 7 -    231459 -tttcccc
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539636 7 + 130588469 -TTTCCCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277579 7 + 210400635 -TTTTCCC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873668                    4655480 7 +   4854515 -TTTTCCA
i otoGar3.GL873668                  I 72 I 240
s tupBel1.scaffold_137339.1-295073     157911 7 -    295073 CTTTGTG-
i tupBel1.scaffold_137339.1-295073  C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I

a score=407186.000000
s hg38.chr14_KI270722v1_random         173801 132 +    194050 TTGTTATTTTCATGATAT-----AAAAGGTTAGACAGGCCTGCACTGCAAAtgtggag----atctgtgtcatctttctgctg-ccaagactatccca---gtaagttcctcctgaataaatctttgactatctaccagcctgga
s panTro4.chr14_AACZ03171041_random     19840 132 -     37130 TTGTTATTTTCATGATAT-----AAAAGGTTAGACAGGCCTGCACTGcaaatgtggag----atctgtgtcatctttctgctg-ccaagactatccca---gtaagttcctcctgaataaatctttgactatctaccagcctgga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390149 132 +  72422247 TTGTTATTTTCATGATAT-----AAAAGGTTAGACAGGCCTGAACTGCAAATGTGGAG----ATCTGTGTCATCTTTCTGCTG-CCAAGACTATCCCA---GTAAGTTCCTCCTGAATAAATCTTTGACTATCTACCAGCCTGGA
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584105 133 -  28733288 TTTTTATTTTCATGATAT-----AAAAGGTTAGACAGGCATGCACAGCAAAtgtggag----atctgcgtcatctttctgctgcccaagcctatccca---gtaagttcctcccgaataaatctttgactatctaccaacctgga
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511520 133 - 229590362 TTTTTATTTTCATGATAT-----AAAAGGTTAGACAGGCATGCATTGcaaatgtggag----atctgcctcatctttctgctgcccaagaccacctca---gtaagatcctcctaaataaacctttgaccatctaccagcctgga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33177 133 +     87690 TTTTTATTTTCATGATAT-----AAAAGGTTAGACAGGCATGCATTGCAAAtgtggag----atctgcctcatctttctgctgcccaagaccacctca---gtaagatcctcctgaataaaccttcgaccatctaccagcctgga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197511 133 -    231459 tttttattttcatgatat-----cAAAGGTTAGACCGGCATGCATTGCAAATGTGGAG----ATCTGCCTCATCTTTCTGCTGCCCAAGACCACCTCA---GTAAGATTCTCCTGAATAAACCTTCGACCGTCTATCAGCCTGGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539643 133 + 130588469 TTTTTATTTTCATGATAT-----AAAAGGTTAGACAGGCATGCATTGCAAAtgtggag----atctgcctcatcttgctgctgcccaagaccacctca---gtaagatcctcctgaataaaccttcgaccgtctaccagcctgga
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277586 132 + 210400635 TTTTTCTTTTCATGATAT-----AAAACGTTAGACAGGCATGCACTGCAAGTGTGGGG----ATCTGCCTCACCTTTTTGTTGCCCACGACTCTCTCA---GCAC-CTGCTCCAGAACAAATCTTTGACTGTCTGCCAGACTGGA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_137339.1-295073     157918 144 -    295073 TTTCTCTTTTCTTGGCATAGTCCAATAGCCTAGGCAAGCATGCATTGCTGGCATGGAGATCTATCTACCTTGTCTGGCTGCTGTCCAAGACCACCTAGTACGTAAGTTTTTCCTGAATAAA-CTTTAACAATCTACCAACCTTGA
i tupBel1.scaffold_137339.1-295073  C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                37357 934 -     43889 I
e otoGar3.GL873668                    4655487 240 +   4854515 I

a score=-3379.000000
s hg38.chr14_KI270722v1_random         173933 1 +    194050 -g
s panTro4.chr14_AACZ03171041_random     19972 1 -     37130 -g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390281 1 +  72422247 -G
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584238 1 -  28733288 -a
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511653 1 - 229590362 -a
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33310 1 +     87690 -a
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197644 1 -    231459 -A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539776 1 + 130588469 -a
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277718 1 + 210400635 -A
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                38291 1 -     43889 -g
i micMur1.scaffold_18511            I 934 I 101
s tupBel1.scaffold_137339.1-295073     158062 1 -    295073 T-
i tupBel1.scaffold_137339.1-295073  C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e otoGar3.GL873668                    4655487 240 +   4854515 I

a score=257086.000000
s hg38.chr14_KI270722v1_random         173934 84 +    194050 tggtctgtctctttctttggtctgagagcttcctctcca-ttATGTAGAATAG--CTCAGTTCTGACAGGGAGTTTTCCTAATATTT
s panTro4.chr14_AACZ03171041_random     19973 84 -     37130 tggtctgtctctttctttggtCTGAGAGCTTCATCTCCA-TTATGTATGATAG--CTCAGTTCTGGCAGGGAGTTTTCCTaacattt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390282 84 +  72422247 TGGTCTATCTCTTTCTTTGGTCTGAGAGCTTCCTCTCCA-TTATGTAGGATAG--CTCAGTTCTGGCAGGGAGTTTTCCTaacattt
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584239 84 -  28733288 gggtctatctctttctttggtctgagagcttcctctcca-ttATGTAGGACAG--CTCAATTCTGGCAGCGAGTTTTCCTaacattt
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511654 84 - 229590362 tggtctatcactttctttggtctGAGAGCTTTCTCTCCA-TTATTTAGGACAA--CTCAGTTCTGGCAGGAAGTTTTCCTaacattt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33311 84 +     87690 tggtctatctctttctttggtctgagagctttctctcca-ttATGTAGGACAA--CTCAGTTCTGGCAGGAAGTTTTCCTaacattt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197645 84 -    231459 TGGTCTATCTCTTTCTTTGGTCTGAGAGCTTTCTCTCCA-TTATGTAGGACAA--CTCAGTTCTGGCAGGAAGTTTTCCTAACATTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539777 84 + 130588469 ttgtctatctctttctttggtctgagagctttctctcca-ttATGTAGGACAA--CTCAGTTCTGGCAGGAAGTTTTCCTaacattt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277719 84 + 210400635 CAGACTGTCTCTTTCTTTGGTCT--GAGCTTCTTCTCCA-TTACGTAGGACCGTTCTCAGTTCTGGCAGCGAGTTTTCCTaacattt
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_137339.1-295073     158063 81 -    295073 -GGT---TCTGCCTCTTTGGTCTGAGC--TTGCCCTTGACTTATGGAGAATGGTTCTCTGTTGAGGCACAGAGTTTCCCCAATGTTT
i tupBel1.scaffold_137339.1-295073  C 0 N 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                38292 101 -     43889 I
e otoGar3.GL873668                    4655487 240 +   4854515 I

a score=40709.000000
s hg38.chr14_KI270722v1_random         174018 16 +    194050 TTctacactgact-aga
s panTro4.chr14_AACZ03171041_random     20057 16 -     37130 ttctacactgact-aga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390366 16 +  72422247 ttctagactgact-agg
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584323 17 -  28733288 ttctagactgactaaga
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511738 17 - 229590362 ttctagactgagtaaga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33395 17 +     87690 ttctagactgagtaaga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197729 17 -    231459 TTCTAGACTGACTAAGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539861 17 + 130588469 ttctagactgactaaga
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277803 17 + 210400635 ttctagactgactaaga
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                38292 101 -     43889 I
e otoGar3.GL873668                    4655487 240 +   4854515 I

a score=6786.000000
s hg38.chr14_KI270722v1_random         174034 3 +    194050 ---aaa
s panTro4.chr14_AACZ03171041_random     20073 3 -     37130 ---aaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390382 3 +  72422247 ---aaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584340 3 -  28733288 ---aaa
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511755 3 - 229590362 ---aaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33412 3 +     87690 ---aaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197746 3 -    231459 ---AAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539878 3 + 130588469 ---aaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277820 3 + 210400635 ---aaa
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                38393 5 -     43889 aacaa-
i micMur1.scaffold_18511            I 101 I 1813
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e otoGar3.GL873668                    4655487 240 +   4854515 I

a score=217540.000000
s hg38.chr14_KI270722v1_random         174037 77 +    194050 atagagagaag---actcaagtaactaaaatcagaaaagaaagaggatatattactagcagcattgcaaaaagaaaaata
s panTro4.chr14_AACZ03171041_random     20076 76 -     37130 atagagagaag---actcaagtaactaaaatcagaaatgaaagaggatatattactagcagcattgcaaaaa-aaaaata
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390385 74 +  72422247 a---atagaag---actcaagtaactaaaatcagaaatgaaagaggatatattactagcagcattgcaaaaagaaaagaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584343 77 -  28733288 atagagagaag---actcaagtaactaaaatcagaaatgaaagaggatatattactaccagcattgcaagaagaaaagaa
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511758 77 - 229590362 atagagagaag---actcaaataactaaaatcagaaatgaaagaggatatattacttccagcattgcaaaaagaaaagaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33415 77 +     87690 atagagagaag---actcaaataactaaaatcagaaatgaaagaggatatattacttccagcattgcaaaaagaaaagaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197749 77 -    231459 ATAGAGACAAg---actcaaataactaaaatcagaaatgaaagaggatatATTACTTCCAGcattgcaaaaagaaaagaa
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539881 77 + 130588469 atagagagaag---actgaaataactaaaatcagaaatgaaagaggatatattactcccagcattgcaaaaagaaaagaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277823 80 + 210400635 atagagaggagaaaactcaagtagctaaaatcagaaatgaaagaggataaattactaccagcattgcaaaaagaaaagaa
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4655487 240 +   4854515 I

a score=8595.000000
s hg38.chr14_KI270722v1_random         174114 2 +    194050 ca
s panTro4.chr14_AACZ03171041_random     20152 2 -     37130 ca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390459 2 +  72422247 ca
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584420 2 -  28733288 ca
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511835 2 - 229590362 ca
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33492 2 +     87690 ca
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197826 2 -    231459 ca
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539958 2 + 130588469 ca
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277903 2 + 210400635 ca
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873668                    4655727 2 +   4854515 ca
i otoGar3.GL873668                  I 240 I 102
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I

a score=452511.000000
s hg38.chr14_KI270722v1_random         174116 156 +    194050 tttaaggaaaaataatatgaacaatggtaggccaatatattagataacttagatacaatggaaaaatttctagacacaaaccagtgacactgatgcaat-aaaaaatgctctcactagacataataagcaaagagtttgaattattaataaagaaac
s panTro4.chr14_AACZ03171041_random     20154 154 -     37130 tttaaggaaaaataatatg--caatggtaagccaatatattaggtaacttagatacaatggaaaaatttctagacacaaaccagtgacactgatgcaat-aaaaaatgctctcactagacatgataagcaaagagattgaattattaataaagaaac
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390461 156 +  72422247 tttaaggaaaaataatatgaacaatagtatgccaaaatattagataatttagatacaatggaaaaattcctagacacaaaccagtgacactgatgcaat-aaaaaatgctctcactagacataataagcaaagagattgaattattaataaagaaac
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584422 155 -  28733288 tttaaggaaaaataatatgaacaatggtatgccaatatattagataatttagatacaatggaaaaattcctagacacaaaccagtgacactgatgcaat--aaaaatgctctcactagacataataagtaaagagattgaattattaataaagaaac
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511837 156 - 229590362 tttaaggaaaaataatatgaacaatggtatgccaatatattaggcaatttagatacaatggaaacattcctagacaccacccagtgacactgatgcaag-aaaaaatgctctcactagacataataagtaaagagattgaattattaataaagaaac
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33494 156 +     87690 tttaaggaaaaataatatgaacaatggtatgccaatatattagataatttagatacaatggaaacattcctagacaccacccagtgacactgatgcaag-aaaaaatgctctcactagacataataagtaaagagattgaattattaataaagaaac
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197828 156 -    231459 tttaaggaaaaataatatgaacaatGGTATGCCAATATATTAGATAATTTAGATACAATGGAAACATTCCTAGACACCATCCAGTGACACTGATGCAAG-AAAAAATGCTCTCACTAGACATAAtaagtaaagagattgaattatTAATAAAGAAAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130539960 152 + 130588469 tttaaggaaaaataatatgaacaatggtatgccaatatattagataatttagatacaatggaaacattcctagacacgacccagtgacactgatgcaag-aaaaaatgctctcactagacacaataagtaaagagatttaattattaat----aaac
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174277905 157 + 210400635 tttaaggaaaaatcatatgaacagtggtatgccaatatatgaggtaatttagatacaatggaaaaattcctagacacaaaccagtgacaccgatgcaagaaaaaaataacctgactggacataacaagtaaagagatttaattattaatcaagaaac
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   421352 1202 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4655729 102 +   4854515 I

a score=-864.000000
s hg38.chr14_KI270722v1_random         174272 1 +    194050 -a
s panTro4.chr14_AACZ03171041_random     20308 1 -     37130 -a
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390617 1 +  72422247 -a
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584577 1 -  28733288 -a
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511993 1 - 229590362 -a
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33650 1 +     87690 -a
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197984 1 -    231459 -A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540112 1 + 130588469 -a
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   422554 1 -    492427 -a
i rhiRox1.KN297764v1                I 1202 I 36
s calJac3.chr1                      174278062 1 + 210400635 c-
i calJac3.chr1                      C 0 C 0
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4655729 102 +   4854515 I

a score=112703.000000
s hg38.chr14_KI270722v1_random         174273 36 +    194050 actccacaccaagaaaagccctagcccagaaagttc
s panTro4.chr14_AACZ03171041_random     20309 36 -     37130 actccacaccaagaaaagccctagcccagaaagttc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390618 36 +  72422247 actccacaccaagaaaagccctagctcagaaagttc
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584578 36 -  28733288 attccacaccaaggaaagccctagcccagaaagttc
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225511994 36 - 229590362 actccacaccaagaaaagccctagcccagaaagttt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33651 36 +     87690 actccacaccaagaaaagccctagcccagaaagttt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     197985 36 -    231459 ACTCCACACCAAGAAAAGCCCTAGCCCAGAAAGTTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540113 36 + 130588469 actccacaccaagaaaagccttagcccagaaagttc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174278063 36 + 210400635 acttcacacgaagaaaagcccaagcccagaaagttc
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   422555 36 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4655729 102 +   4854515 I

a score=434661.000000
s hg38.chr14_KI270722v1_random         174309 119 +    194050 actggtgaattttgtctaatatttgaagaagatttaggatcaattcttt-taaactctccaaaaaatagaagtggt----agggacatgccccaactcattctatgaggccag-----------tattaccatga
s panTro4.chr14_AACZ03171041_random     20345 130 -     37130 actggtgaattttgtctaatatttgaagaatatttaggatcaattcttt-taaactctccaaaaaataggagtggt----ggagacatgtcccaactcattctatgaggccagtattaccatattattaccatga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390654 119 +  72422247 actggtgaattttgtccaatatttgaagaagatttaggatcaattcttt-taaactctctaaaaaatagaagtgat----agagacatgtcccatctcattctatgaggccag-----------tattaccatga
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584614 120 -  28733288 actggtgaattttgtccaatatttgaagaagatttatgatcaattatttccaaactctccaaaaaatagaagtggt----agatacatgcctcaactcattctatgaggccag-----------tattaccatga
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225512030 124 - 229590362 gctggtgaattttgtccaacatttgaagaagatttaggatcaattctttccaaactctccaaaaaatagaagtggtagagagagacatgtcccaactcattctatgaggccag-----------tattaccatga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33687 124 +     87690 gctggtgaattttgtccaacatttgaagaagatttaggatcaattctttccaaactctccaaaaaatagaagtggtagagagagacatgtcccaactcattctatgaggccag-----------tattaccatga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     198021 121 -    231459 GCTGGTGAATTTTGTCCAACATTT---GAAGATTTAGGATCAACTCTTTCCAAACTCTCCAAAAAATAGAAGTGGTAGAGAGAGACAtgtcccaactcattctatgaggccag-----------tattaccatGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540149 124 + 130588469 gctggtgaattttgtccaacatttgaagaagatttaggatcaattctttccaaactctccaaaaaatagaagtggtagagagagacatgtcccaactcattctatgaggccag-----------tattaccatga
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   422591 124 -    492427 actggtgaattttgtccaatatttgaagaagatttaggatcaattctttccaaattctccaaaaaatagaagtggtagagagagacatgtcccaactcattctatgaggccag-----------tattaccacga
i rhiRox1.KN297764v1                I 36 C 0
s calJac3.chr1                      174278099 120 + 210400635 actggtgaattctgtccaatatttggagaagatttaggatctattctttccaaactctccaaaaaatagaagtgat----agggacatgtcccaactccttctatgaggccag-----------tattaccatga
i calJac3.chr1                      C 0 C 0
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4655729 102 +   4854515 I

a score=1480.000000
s hg38.chr14_KI270722v1_random         174428 1 +    194050 t
s panTro4.chr14_AACZ03171041_random     20475 1 -     37130 t
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390773 1 +  72422247 t
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584734 1 -  28733288 c
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225512154 1 - 229590362 c
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33811 1 +     87690 c
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     198142 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540273 1 + 130588469 c
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   422715 1 -    492427 c
i rhiRox1.KN297764v1                C 0 C 0
s calJac3.chr1                      174278219 1 + 210400635 t
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873668                    4655831 1 +   4854515 t
i otoGar3.GL873668                  I 102 I 19
e micMur1.scaffold_18511                38398 1813 -     43889 I

a score=183715.000000
s hg38.chr14_KI270722v1_random         174429 47 +    194050 agcaaagccatacaaagacatcacgaggaaagaaaaattcagaccaa
s panTro4.chr14_AACZ03171041_random     20476 47 -     37130 agcaaagccatccaaagacatcatgaggaaagaaaaattcagaccaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390774 47 +  72422247 agcaaagccatacaaagacatcacgaggaaagaaaaattcagaccaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584735 47 -  28733288 agcaaagccatacaaagacatcacgaggagagaaaaattcagaccaa
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225512155 47 - 229590362 agcgaagccatacaaagacatcacgaggaaagaaaaattcagaccaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33812 47 +     87690 agcaaagccatacaaagacatcaccaggaaagaaaaattcagaccaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     198143 47 -    231459 AGCGAAGCCATACAAAGACATCACGAGGAGAGAAAAATTCAGACCAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540274 47 + 130588469 agcaaagccatacaaagacatcacgaggaaagaaaaattcagaccaa
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   422716 47 -    492427 agcaaagccatacaaagacatcaagaggaaagaaaaattcagaccaa
i rhiRox1.KN297764v1                C 0 C 0
s calJac3.chr1                      174278220 47 + 210400635 agcaaagacatacaaagacatcacgagaaaggagaaattcagaccaa
i calJac3.chr1                      C 0 C 0
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4655832 19 +   4854515 I

a score=191977.000000
s hg38.chr14_KI270722v1_random         174476 51 +    194050 tatatcttatgaatacagatgcaa-aactcttcaataaaatacaagcaaaca
s panTro4.chr14_AACZ03171041_random     20523 51 -     37130 tatatcttatgaatatagatgcaa-aactcttcaataaaatacaagcaaaca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390821 51 +  72422247 tatatcttatggatacagatgcta-aactcttcaataaaatacaagcaaatg
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584782 51 -  28733288 tatatcttatgaatatagatgcaa-aactcttcaataaaatacaagcaaaca
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225512202 51 - 229590362 tatatcttatgaatacagatgcaa-aactcttcaataaaatataagccaaca
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33859 51 +     87690 tatatcttatgaatacagatgcaa-aactcttcaataaaatacaagccaaca
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     198190 51 -    231459 TATATCttatgaatacagatgcaa-aactCTTCAATAAAATACAAGCCAAca
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540321 51 + 130588469 tacatcttatgaatacagatgcaa-aactcttcaataaaatacaagccaaca
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   422763 51 -    492427 tatatcttatgaatacagatgcaa-aactcttcaataaaatacaagccaaca
i rhiRox1.KN297764v1                C 0 C 0
s calJac3.chr1                      174278267 51 + 210400635 tatatcttatgaatacagatgcaa-aactcttcaataaaatacaagcaaaca
i calJac3.chr1                      C 0 I 3711
s otoGar3.GL873668                    4655851 44 +   4854515 --------CAGTGCccaggagcaatggctcactcctgtaatcccagcactct
i otoGar3.GL873668                  I 19 C 0
e micMur1.scaffold_18511                38398 1813 -     43889 I

a score=1027866.000000
s hg38.chr14_KI270722v1_random         174527 350 +    194050 gagaggccaggtgcggtggctcatgactgtaatcctagcactttgggaggctgaggtgggggcat--cacgaggtcaggaga-ttgagaccatcctggctgacacagtgaaaccctgtctctact-aaaaatacaaaaaattagccaggcatgatggtgggcacctgtagtcccagctactcaggaagctaaggcaggagggagaatggcatgaacccaggaggtggagcttgcagtgagccgagatcttgccactgcatcccagccttggtgacacagcaagactctgtctcaaaaaataaaa-t-----aaataaaata------------------------aaataaaatgcaaacaa---acagaatacagca---acatgtaaa
s panTro4.chr14_AACZ03171041_random     20574 355 -     37130 gagaggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggggcat--cacgaggtcaggaga-ttgagaccatcctggctgacacagtgaaaccctgtctctacc-aaaaatacaaaaaattagccaggcatggtggtgggcacctgtagccccagctactcctgaggctgaggcaggagggagaatggcatgaacccaggaggtggagcttgcagtgagccgagatcctgccactgcatcccagccttggtgacacagcaagactctgtctcaaaaaatgaaa-taaataaaataaaata------------------------aaataaaatacaagcaa---acagaatacagaa---acatgtaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64390872 379 +  72422247 gagaggccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggggcat--cacaaggtcaggaga-tcgaaaccatcctggctgacacagtgaaaccctgtctctact-aaaaatacaaaaaattagccaggcatggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggaaagagaatggcatgaaccaaggaggtggagcttgcagtgagccaagatcgtgccactgcatcccagccttggtgacacagcaagactctgtctcaaaaaataaaa-taaataaaataaaataaaataaaataaaataaaataaaataaataaaatacaagcaa---acagaatacagca---acatgtaaa
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27584833 360 -  28733288 gagaggctgggagtggtggctcatgcctgtaatcccagcattttgggaggttgaggtgggtggat--catgaggtcaggaga-tcaagaccatcctggctaacatggtgaaacccggtctctactaaaaaatacaaaaaattagccaggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagggagactggcgtgaacccaggaggtgaagcttgcagtgagccaagatcacgccactgcatcccagcctgggtgacagagtgagactccatctcaaaaaaaaaaagtaaataaataaaaatg---------------------aataaataaaatacaagcaa---acagaatacagca---acatctaaa
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225512253 355 - 229590362 gagaggccaggcgtgctggctcacacctgtaatcccagcactttgggaggccaaagcgggcaaat--catgaggtcaggaga-ttgagaccatcctggctaacatggtgaaatcccgtctcgactaaaaaatacaaaaaattaaccaggcatggtggcaggcgcctgtagtcccagctgcttgggaggctgaggcaagagggagaatggcatgaatctggggggcagagcttgcagtgagccgagatcacgccactgcatcctaacttgggtgacagagc--aactctgtctcaaaaaataaa--taaataaaataaataa---------------------aataaat-aaatacaagcaa---acagaatacagca---acatgagaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          33910 355 +     87690 gagaggccaggcgtggtggctcacacctgtaatcccagcacttcgggaggccaaagtgggcagat--catgaggtcaggaga-ttgagaccatcctggctaacatggtgaaatcccgtctcgactaaaaaatacaaaaaattaaccaggcatggtggcaggtgcctgtagtcccagctgcttgggaggctgaggcaagagggagaatggcatgaatctggggggcagagcttgcagtgagctgagatcacgccactgcatcctaacttgggtgacagagc--gactctgtctcaaaaaataaa--taaataaaataaataa---------------------aataaat-aaatacaagcaa---acagaatacagca---acatgagaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     198241 355 -    231459 gagaggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaagcgggcagat--catgaggtcaggaga-ttgagaccatcctggctaacatggtgaaatcccgtctcgactaaaaaatacaaaaaattaaccaggcatggtggcaggcgcctgtagtcccagctgcttgggaggctgaggcaagagggagaatggcatgaatctggggggcggagcttgcagtgagtcgagatcatgccactgcatcccaacttgggtgacagagc--gactccgtctcaaaaaataaa--taaataaaataaataa---------------------aataaat-aaatacaagcaa---ACAGAATACAGCA---Acatgagaa
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540372 350 + 130588469 gagaggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaagcgggcagat--cacgagggcaggaga-ttgagatcatcctggctaacatggtgaaatcccgtctcgactaaaaaatacaaaaaattaaccaggcatggtggcaggcgcctgtagtcccagctgcttgggaggctgaggcaagagggagaatggcatgaatctggggggcggagcttgcagtgagccaagatcatgccactgcatcccaacttgggtgacagagc--gactccgtctcaaaaaataaa--taaataaaat-----a---------------------aataaat-aaatacaagcaa---acagaatacagca---acatgtgaa
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   422814 351 -    492427 gagaggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaagcgggcagat--catgaggtcaggaga-ttgagaccatcctggctaacatggtgaaatcccgtctcaactaaaaaatacaaaaaattaacaaggcatggtggcaggcgcctgtagtcccagctgcttgggaggctgaggcaggagggagaatggcgtgaatctggggggcagagcttgcagtgagccgagatcatgccactgcatcccagcctgggtgacagagc--gactccatctcaaaaaataaa--taaataaaat-----a---------------------aataaataaaatacaagcaa---acagaatacagca---acatgtgaa
i rhiRox1.KN297764v1                C 0 C 0
s otoGar3.GL873668                    4655895 302 +   4854515 --------------------------------------------gggaagccaaggcggctggattgccccaggctaacaggtttgagaccaccctga--gaagtaatgagaccccgtctcta-----------aaaaaaatagctgggcattgtggcaggtgcctgtagtcccagctaattgggaggctgaggcaagagg----atcacttgagcccaaaagtttaaggtagctgtgagctatgat---gccatggcattctaccaagggtgacaaagtgagactctgtgtcaaaaaaagaa---aaatgaaagaaGTAa---------------------tcaacagagaaaacagacaacctaccgaatacagaaaatatatgcaaa
i otoGar3.GL873668                  C 0 n 0
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I

a score=4959958.000000
s hg38.chr14_KI270722v1_random         174877 1671 +    194050  
s panTro4.chr14_AACZ03171041_random     20929 1673 -     37130  
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64391251 1673 +  72422247  
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27585193 1699 -  28733288  
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225512608 1678 - 229590362  
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          34265 1683 +     87690  
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     198596 1681 -    231459  
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130540722 1672 + 130588469  
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   423165 1666 -    492427  
i rhiRox1.KN297764v1                C 0 I 6467
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197    0 +   4854515 I

a score=1637458.000000
s hg38.chr14_KI270722v1_random         176548 699 +    194050  
s panTro4.chr14_AACZ03171041_random     22602 701 -     37130  
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64392924 702 +  72422247  
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27586892 702 -  28733288  
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225514286 699 - 229590362  
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          35948 699 +     87690  
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     200277 686 -    231459  
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130542394 699 + 130588469  
i chlSab2.chr20                     C 0 I 4216
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197   0 +   4854515 I

a score=1179.000000
s hg38.chr14_KI270722v1_random         177247 1 +    194050 a
s panTro4.chr14_AACZ03171041_random     23303 1 -     37130 a
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64393626 1 +  72422247 a
i ponAbe2.chrUn                     C 0 C 0
s nomLeu3.chr24                      27587594 1 -  28733288 a
i nomLeu3.chr24                     C 0 C 0
s rheMac3.chr1                      225514985 1 - 229590362 a
i rheMac3.chr1                      C 0 I 6781
s macFas5.chr5_KE145639_random          36647 1 +     87690 a
i macFas5.chr5_KE145639_random      C 0 I 44
s papAnu2.JH684932                     200963 1 -    231459 G
i papAnu2.JH684932                  C 0 I 44
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197 0 +   4854515 I
e chlSab2.chr20                     130543093 4216 + 130588469 I

a score=150011.000000
s hg38.chr14_KI270722v1_random         177248 219 +    194050 agctgaccagactgccagcagctcctcctcaca----ttaacactgaggaatgaaggagagtaagccaggaagctctccactgactagaagcccaggcatca----------------------------gcaga--cagtgtatgctcaggcacacactcaaggtcagttcccagacgctggctaggagcccaggcatcagcaggcacagtgcatgctcaggcataatgcagatgcagtgcatgctcaggca
s panTro4.chr14_AACZ03171041_random     23304 224 -     37130 a-ctggccagactgccagcagctccttctcacgttatttaacactgaggagtgcctgggtgtaacctaggcagctctccgctggctagaagcccaggcatca----------------------------gcagacgcagtgcatgctcagacatacacccaaggtgagttcccaaatgctggctagaagcccaggcatcagcagacgcagtgcatgctcaggcatgatgcagacgcagtgcatgctcaggca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64393627 222 +  72422247 gtctggccagactgccagcagctcctcctcacattatttaacactgaggaatgcaggagagtaacccaggaagctctccactggctagaagcccaggcatca----------------------------gcagatgcagtgcatgctcaggcacacactcaaggtcagttcccagatgcTGGCTAGGAGCCCAGGCATCAGC---CGCAGTGCATGCTCAGGCATGATGCAGACACAGCACATGCTCAGGCA
i ponAbe2.chrUn                     C 0 I 3663
s nomLeu3.chr24                      27587595 252 -  28733288 a-ctggccagactgccagcagctccttctcacgttatttaacactgaggagcacaggagagtaacctaggcagctctccgctggctaggagcccaggcatcagcacacgcagtgcatgctcaggcatGATGCAGACGCAGCGCATGCTCAGGCACACACTCAAGGTCAGTTCCCAGACGCTGGCTAGAAGCCCAGGCATCAGCAGACGCAGCGCATGCTCAGGCATGATGCAGACGCAGTGCATGCTCAGGCA
i nomLeu3.chr24                     C 0 C 0
s macFas5.chr5_KE145639_random          36692 125 +     87690 gcctggccagactgccagcagctcctcctcatgtcatttaacactgaggagcgcaggagagtaacctaggcagctccccgctggctagcagcccatgcatca----------------------------gccgacccagtgcatgccc---------------------------------------------ggca-------------------------------------------------------
i macFas5.chr5_KE145639_random      I 44 C 0
s papAnu2.JH684932                     201008 125 -    231459 GCCTGGCCAGACTGCCAGCAGCTCCTCCTCACGTCATTTAACACTGAGGAGCGCAGGAGAGTAACCCAGGCAGCTCCCCGCTGGCTAGCAGCCCATGCATTA----------------------------GCCGACACAGTGCATGCCC---------------------------------------------GGCA-------------------------------------------------------
i papAnu2.JH684932                  I 44 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197   0 +   4854515 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=18961.000000
s hg38.chr14_KI270722v1_random         177467 23 +    194050 tacactcaagatcagttcccaga
s panTro4.chr14_AACZ03171041_random     23528 23 -     37130 cacactcaaggtctgttcccaga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s nomLeu3.chr24                      27587847 23 -  28733288 CACACTCAAGGTCAGTTCCCAGA
i nomLeu3.chr24                     C 0 N 0
s macFas5.chr5_KE145639_random          36817 23 +     87690 tacactcaaggtcatttcccaga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     201133 23 -    231459 TACACTCAAGGTCAGTTCCCAGA
i papAnu2.JH684932                  C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197  0 +   4854515 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=289733.000000
s hg38.chr14_KI270722v1_random         177490 601 +    194050  
s panTro4.chr14_AACZ03171041_random     23551 599 -     37130  
i panTro4.chr14_AACZ03171041_random C 0 I 1
s macFas5.chr5_KE145639_random          36840 601 +     87690  
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     201156 601 -    231459  
i papAnu2.JH684932                  C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197   0 +   4854515 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=2251.000000
s hg38.chr14_KI270722v1_random         178091 10 +    194050 aaaagaagaa
s macFas5.chr5_KE145639_random          37441 10 +     87690 aaaaaaaaaa
i macFas5.chr5_KE145639_random      C 0 I 3524
s papAnu2.JH684932                     201757 10 -    231459 aaaaaaagaa
i papAnu2.JH684932                  C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197  0 +   4854515 I
e panTro4.chr14_AACZ03171041_random     24150  1 -     37130 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=987.000000
s hg38.chr14_KI270722v1_random         178101 19 +    194050 gaaagaaga-aaagaggaag
s papAnu2.JH684932                     201767 20 -    231459 agaagaagaggaagaggaag
i papAnu2.JH684932                  C 0 I 3348
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197  0 +   4854515 I
e panTro4.chr14_AACZ03171041_random     24150  1 -     37130 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e macFas5.chr5_KE145639_random          37451 3524 +     87690 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=0.000000
s hg38.chr14_KI270722v1_random         178120 231 +    194050 aagaagaagaagaaaagaagaagaagaagaagaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggaggaggaggaggaggaggaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaga
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197   0 +   4854515 I
e panTro4.chr14_AACZ03171041_random     24150   1 -     37130 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e papAnu2.JH684932                     201787 3348 -    231459 I
e macFas5.chr5_KE145639_random          37451 3524 +     87690 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=375201.000000
s hg38.chr14_KI270722v1_random         178351 4301 +    194050  
s panTro4.chr14_AACZ03171041_random     24151 4300 -     37130  
i panTro4.chr14_AACZ03171041_random I 1 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197    0 +   4854515 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e papAnu2.JH684932                     201787 3348 -    231459 I
e macFas5.chr5_KE145639_random          37451 3524 +     87690 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=613.000000
s hg38.chr14_KI270722v1_random         182652 2 +    194050 ta
s panTro4.chr14_AACZ03171041_random     28451 2 -     37130 ta
i panTro4.chr14_AACZ03171041_random C 0 C 0
s macFas5.chr5_KE145639_random          40975 2 +     87690 tg
i macFas5.chr5_KE145639_random      I 3524 C 0
s papAnu2.JH684932                     205135 2 -    231459 TG
i papAnu2.JH684932                  I 3348 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197 0 +   4854515 I
e chlSab2.chr20                     130543093 4216 + 130588469 I
e rheMac3.chr1                      225514986 6781 - 229590362 I

a score=41914.000000
s hg38.chr14_KI270722v1_random         182654 32 +    194050 cataccctaaaataaacaatcgtcctgttctc
s panTro4.chr14_AACZ03171041_random     28453 32 -     37130 cataccctaaaataaacaatcgtcctgttctc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225521767 32 - 229590362 cataccctcaaataaacaatcctcctgttctc
i rheMac3.chr1                      I 6781 C 0
s macFas5.chr5_KE145639_random          40977 32 +     87690 cataccctcaaataaacaatcctcctgttctc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205137 32 -    231459 CATACCCTCAAATAAACAATCCTCCTGTTCTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547309 32 + 130588469 cataccctcaaataaacaatcctcctgttctc
i chlSab2.chr20                     I 4216 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e ponAbe2.chrUn                      64393849 3663 +  72422247 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=54532.000000
s hg38.chr14_KI270722v1_random         182686 32 +    194050 catataggtctctctagtcTCTCGAGTCCTCT
s panTro4.chr14_AACZ03171041_random     28485 32 -     37130 catatcggtctctctagtcTCTCGAGTCCTCT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64397512 32 +  72422247 CATATTGgtctctctagtctctctagtcctct
i ponAbe2.chrUn                     I 3663 C 0
s rheMac3.chr1                      225521799 32 - 229590362 catattggtctgcctagtctctctagtcctct
i rheMac3.chr1                      C 0 I 10
s macFas5.chr5_KE145639_random          41009 32 +     87690 catattggtctgcctagtctctctagtcctct
i macFas5.chr5_KE145639_random      C 0 I 10
s papAnu2.JH684932                     205169 32 -    231459 CATATTGGTCTGCCTAGTCTCTCTAGTCCTCT
i papAnu2.JH684932                  C 0 I 10
s chlSab2.chr20                     130547341 32 + 130588469 catattgggctgcctagtctctctagtcctct
i chlSab2.chr20                     C 0 I 10
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174278318 3711 + 210400635 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=226559.000000
s hg38.chr14_KI270722v1_random         182718 84 +    194050 attccagcacttttgaa-ggccaaggtgggcagatcacttgaggccacgaattcaaggccaacctagccaacatggggatacccc
s panTro4.chr14_AACZ03171041_random     28517 84 -     37130 attccagcacttttgaa-ggccaaggtgggcagatctcttgaggccacgaattcaagaccagcctagccaacatggggatacccc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.AJFE01000700                    234 82 +      1869 atcccagcaccttggga-ggccgaggagggcggatcac--gaggtcaggagttggagaccagcctgaccaacatggtgaaaaccc
i panPan1.AJFE01000700              N 0 N 0
s ponAbe2.chrUn                      64397544 85 +  72422247 agtccagcacttttgaagggccaaggtgggcagatcacttgaggccacgaattcaagaccagcctagccaacatgtggaaaccct
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225521841 84 - 229590362 acaccagcacttttgaa-ggccaaggtgggcagatcacttgaggccacgaattcgagaccagcctgggcaacatgcggagacccc
i rheMac3.chr1                      I 10 C 0
s macFas5.chr5_KE145639_random          41051 84 +     87690 acaccagcacttttgaa-ggccaaggtgggcagatcacttgaggccacgaattcgagaccagcctgggcaacatggggagacccc
i macFas5.chr5_KE145639_random      I 10 C 0
s papAnu2.JH684932                     205211 84 -    231459 ACaccagcacttttgaa-ggccaaggtgggcagatcacttgaggccacgaattcgagaccagcctgggcaacatggggaaacccc
i papAnu2.JH684932                  I 10 C 0
s chlSab2.chr20                     130547383 84 + 130588469 acaccagcacttttgaa-ggccaaggtgggcagatcacttgaggccacgaattcgagaccagcctgggcaacatggggaaacccc
i chlSab2.chr20                     I 10 C 0
s calJac3.chr1                      174282029 84 + 210400635 atcccagcccttgtgaa-ggccaaggtgggcagatcacttgaggccacaaatttgggaccagcctggtcaacatggtgaaacccc
i calJac3.chr1                      I 3711 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=361379.000000
s hg38.chr14_KI270722v1_random         182802 159 +    194050 atctctattaaaaatacaaaaattagccaggcgtggtggcgcatgcctgtagtcccagctcctctggaggctgaggcaggagaatcacttgaacctgggaggtggaggctgcagtgagctgagatcccaccactgcactccagcctgggagacagaggg
s panTro4.chr14_AACZ03171041_random     28601 159 -     37130 atctctattaaaaatacaaaaattagccaggctttgtggcacatgcctgtagtcccagctcctctggaggctgaggcaggagaatcacttgaacctgggaggcggaggctgcagtgagctgagatcccaccactgcactgcagcctgggagacagaggg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64397629 159 +  72422247 atctctattaaaaatacaaacattatctgggcgtggtggcgcatttctgtagtcccagctcctctggaggctgaggcaagagaatcacttgaacctgggaggtggaggctgcagtgagctgagatcctgccactgcactccagcctgggagacagaggg
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225521925 159 - 229590362 atctccattaaaaacacaaaaattagccgggcgtggtggcgcgcgcctgtagtcccagttcctctggaggctgaggcaggaggatcgcgtgaacccgggaggtggaggctgcagtgagctgagatcccgccactgccctccagcctgggagacggaggg
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41135 159 +     87690 atctccattaaaaacacaaaaattagccgggcgtggtggcgcgcgcctgtagtcccagttcctctggaggctgaggcaggaggatcgcgtgaacccgggaggtggaggctgcagtgagctgagatcccgccactgccctccagcctgggagagggaggg
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205295 159 -    231459 atctccattaaaaacacaaaaattagccgggcgcggtggcgcgcgcctgtagtcccagctcctctggaggctgaggcaggaggatcgcgtgaacccgggaggtggaggctgcagtgagctgagatcccgccactgccctccagcctgggagacggaggg
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547467 159 + 130588469 atctccattaaaaacacaaaaattagccgggcgtggcggcgcgcgcttgtagtcccagctcctctggaggctgaggcaggaggatcgcgtgaccccgggaggtggaggctggagtgagctgagatcccgccactgccctccagcctgggagacggaggg
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282113 159 + 210400635 gtctctactaaaaatacaaaaattagccaggtatggtggtgcgtgcctgtagtctcagctcctggggaggctaaggcaggaggatcgcttcaacccaggaggtggaggctgcagtgagccgagatctcgccattgcactacagcctgggtgacagagcg
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197   0 +   4854515 I

a score=6995.000000
s hg38.chr14_KI270722v1_random         182961 17 +    194050 agaatccgttt-------------------------------aaaaag
s panTro4.chr14_AACZ03171041_random     28760 17 -     37130 agaatcggttt-------------------------------aaaaag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226194 17 +  10938248 AGAATGCATCT-------------------------------ATAAAA
i panPan1.JH650451                  N 0 C 0
s ponAbe2.chrUn                      64397788 17 +  72422247 agaatccgttt-------------------------------aaaaag
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522084 13 - 229590362 agaatccgtt-----------------------------------aaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41294 13 +     87690 agaatccgtt-----------------------------------aaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205454 15 -    231459 agaatccgtt---------------------------------aaaaa
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547626 15 + 130588469 agaatccgtt---------------------------------aaaaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282272 48 + 210400635 aggatccatctcacatacacacacacacacacacacacacacacacac
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                38398 1813 -     43889 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=76751.000000
s hg38.chr14_KI270722v1_random         182978 43 +    194050 aaaaaaaaaaGTTTTTTCTGTGACAGCAACAC-----TTAGAACT-AAA
s panTro4.chr14_AACZ03171041_random     28777 43 -     37130 aaaaaaaaa-GTTTTTTCTGTGACAGCAACAC-----TTAGAACTTAAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226211 39 +  10938248 AACAGACATGGGT-----TATAACAGCAGTAC-----Ttacatcagatt
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64397805 43 +  72422247 aaaaaaaaaaGTTTTTTCTGTGACAGCAACAT-----TTAGAACT-AAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522097 43 - 229590362 aaaaaaaaaaGGTTTTTCTGTAACAGCAACAC-----TTAAAAGT-AAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41307 43 +     87690 aaaaaaaaaaGGTTTTTCTGTAACAGCAACAC-----TTAGAAGT-AAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205469 43 -    231459 aaaaaaaaaaggtttttctgTAACAGCAACAC-----TTAGAAGT-AAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547641 43 + 130588469 aaaaaaaaaaGTTTTTTCTGTAACAGCAACAC-----TTAGAAGT-AAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282320 49 + 210400635 acacacaGATGTTTGTTCAATAACAGCAACATCTATATCAGAACTTAAA
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40211 41 -     43889 AAAAACAGACGTGGGTTCCAGAACAGCGACAC-----CTATATCA-G--
i micMur1.scaffold_18511            I 1813 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=-5334.000000
s hg38.chr14_KI270722v1_random         183021 5 +    194050 -AAAAA
s panTro4.chr14_AACZ03171041_random     28820 5 -     37130 -AAAAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226250 5 +  10938248 -ttttt
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64397848 5 +  72422247 -AAAAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522140 4 - 229590362 -AAAG-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41350 4 +     87690 -AAAG-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205512 4 -    231459 -AAAG-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547684 4 + 130588469 -AAAG-
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282369 4 + 210400635 -AAAA-
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1018 5 +      4931 AAAAT-
i tupBel1.scaffold_67797.1-4931     N 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40252 0 -     43889 C
e otoGar3.GL873668                    4656197 0 +   4854515 I

a score=7421.000000
s hg38.chr14_KI270722v1_random         183026 4 +    194050 AAGT-
s panTro4.chr14_AACZ03171041_random     28825 4 -     37130 AAGT-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226255 4 +  10938248 aaat-
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64397853 4 +  72422247 GAGT-
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522144 4 - 229590362 AAGT-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41354 4 +     87690 AAGT-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205516 4 -    231459 AAGC-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547688 4 + 130588469 AAGT-
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1              0 4 -      1016 AAAT-
i nasLar1.chrUn_JMHX01277281v1      N 0 C 0
s calJac3.chr1                      174282373 4 + 210400635 AAGG-
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40252 4 -     43889 AATT-
i micMur1.scaffold_18511            C 0 I 162
s tupBel1.scaffold_67797.1-4931          1023 4 +      4931 -ATTT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e otoGar3.GL873668                    4656197 0 +   4854515 I

a score=397040.000000
s hg38.chr14_KI270722v1_random         183030 147 +    194050 AAGATTACTTGCCAATATAATTGACTAGTTGGCCCA-CATTCGAATTTTCCCAACATTCCCGCAATGTGCCTGGTTGTCAAACCAGGATTT----AGTAA-----CCAGATTC---CACCT--CA--GTCAGGCGGATAGACACCAATCCCGATCC-----ATCC---TCCG
s panTro4.chr14_AACZ03171041_random     28829 147 -     37130 AAGATTACTTGCTAATATAATTGACTAGTTGGCCCA-CATTCGACTTTTCCCAACATTCCCGCAATGTGCCTGGTTGTCAAACCAGGATTT----AATAA-----CCAGATTC---CACCT--CA--GTCAGGCGGATAGACACCAATCCCGATCC-----ATCC---TCCG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226259 152 +  10938248 gagattactt---AATATCATCGACTCACTGGCCCA-TGTTCGAATTTCCCCACAATTCCCACAATGTACCT-GTTGTCAGACTAGGATATAAGAAAGAA-----CCAGAATTGCACGTCT--CC--GTCAGGTGGATAGAGGCCAGCCAGAATCT-----ATTAGG-TCCG
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64397857 147 +  72422247 AAGATTACTTGCTAATATAATTGACTAGTTGGTCCG-CATTCGAATTTTCCCAATATTCCTGCAATGTGCCTGGTTGTCAAACCAGGATTT----ACTAA-----CCAGATTC---CACGT--CT--GTCAGGCGGATAGACACCAATCCTGATCC-----ATCC---TCGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522148 146 - 229590362 AAGATTACTTGCTAATATAATTGACCAGTTGG-CCG-CATTCGAATTTTCCCAATATTCCCACAATGTGCCTGGTTGTCAAACCAGGATTT----ATTAA-----CCAGATTC---CATGT--CT--GTCAGGCGGGGAGACGCCAACCCGGATGC-----GTCC---TCGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41358 146 +     87690 AAGATTACTTGCTAATATAATTGACCAGTTGG-CCG-CATTCGAATTTTCCCAATATTCCCACAATGTGCCTGGTTGTCAAACCAGGATTT----ATTAA-----CCAGATTC---CATGT--CT--GTCAGGCGGGGAGACGCCAACCCGGATCC-----GTCC---TCGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205520 146 -    231459 AAGATTACTTGCTAATATAATTGACCAGTTGG-CCG-CATTCGAATTTTCCCAATATTCCCACAATGTGCCTGGTTGTCAAACCAGGATTT----ATTAA-----CCAGATTC---CACGT--CT--GTCAGGCGGGGAGACGCCAACCCCGATCC-----GTCC---TCGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547692 146 + 130588469 AAGATTACTTGCTAATATAATTGACCAGTTGG-CCG-CATTCGAATTTTCCCAATATTCCCACAATGTGCCTGGTTGTCAAACCAGGATTT----ATTAA-----CCAGATTC---CACGT--CT--GTCAGGCGGGGAGACGCCAACCCCGACCC-----GTCC---CCGG
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1              4 151 -      1016 GAGATTACT---TAATATCATCGACTCATTGGCCCA-CATTCGAATTTCCCCATAGTTCCCACCATGTTCCCTGTTGTCAGACTAGGGTTA----AGAAC-----CAGAACTG---CACGT--CTCCATCAGGTAGATAGAGGCCAGCCAGAATCCATGAGGTCC---AGGT
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282377 141 + 210400635 AAGGT--------AACATAATCGCCTAGCTGGCCCG-CATTCAAATTTTCCCACTATTCTCACAGTATGCCTGGTTGTCAAAC--AGATTTAATAAAGAA-----CCAGATTC---CACGT--CT--GTCAGGCGGATAGACTCCAATCCCGATCC-----ATCC---TCGG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1027 146 +      4931 AAAACTATT----AATACTGTGCCCTGGTTGGGCTATTATTGGAATTTCCCCGTTTGCCCCACA---TGTCT---TGTCACGC-ACTATTT----AATAAAGCAGCAGAATTC---CACGTCGCT--GTCAAGCGGGTAGAAACC-GTACTGACCC-----AGCAGGTTCGG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40256 162 -     43889 I
e otoGar3.GL873668                    4656197   0 +   4854515 I

a score=6577.000000
s hg38.chr14_KI270722v1_random         183177 2 +    194050 CT
s panTro4.chr14_AACZ03171041_random     28976 2 -     37130 CT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226411 2 +  10938248 GG
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398004 2 +  72422247 CT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522294 2 - 229590362 CT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41504 2 +     87690 CT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205666 2 -    231459 CT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547838 2 + 130588469 CT
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            155 2 -      1016 CT
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282518 2 + 210400635 CT
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40418 2 -     43889 TT
i micMur1.scaffold_18511            I 162 I 5
s tupBel1.scaffold_67797.1-4931          1173 2 +      4931 CT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e otoGar3.GL873668                    4656197 0 +   4854515 I

a score=-3168.000000
s hg38.chr14_KI270722v1_random         183179  4 +    194050 C-----------------CCG
s panTro4.chr14_AACZ03171041_random     28978  4 -     37130 C-----------------CCG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226413  4 +  10938248 T-----------------CTC
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398006  4 +  72422247 C-----------------CCT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522296  4 - 229590362 C-----------------CGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41506  4 +     87690 C-----------------CGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205668  4 -    231459 C-----------------CGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547840  4 + 130588469 C-----------------CGG
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            157 21 -      1016 CCTTGGTAACCATGCTCACTG
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282520  4 + 210400635 C-----------------TTG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1175  4 +      4931 C-----------------TAG
i tupBel1.scaffold_67797.1-4931     C 0 I 11
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40420  5 -     43889 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=4727.000000
s hg38.chr14_KI270722v1_random         183183  7 +    194050 CTTG---------------------GAA----
s panTro4.chr14_AACZ03171041_random     28982  7 -     37130 CTTG---------------------GAA----
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226417 28 +  10938248 CTTGGTAACCATGCTCACTGCTGGTGAA----
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398010  7 +  72422247 CTTG---------------------GAA----
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522300  7 - 229590362 CTTG---------------------GAA----
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41510  7 +     87690 CTTG---------------------GAA----
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205672  7 -    231459 CTTG---------------------GAA----
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130547844  7 + 130588469 CTTG---------------------GAA----
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            178  8 -      1016 CTGG--------------------TGAA----
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282524  7 + 210400635 CTTA---------------------GAA----
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40425  7 -     43889 TGCG---------------------GAA----
i micMur1.scaffold_18511            I 5 I 326
s tupBel1.scaffold_67797.1-4931          1190 12 +      4931 --------------------CTCACGAAGGAA
i tupBel1.scaffold_67797.1-4931     I 11 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=417871.000000
s hg38.chr14_KI270722v1_random         183190 156 +    194050 CAGAATTTCCCGC--------CT------------CAA--TACCGCAATGTCTCGTGGGAAATGCAGTCTCGGCTTCCAATGACGTCACCAGCACAGGGCGGCGGGAAGGGCTCTT-------------TGCGCATGTGCCACCCCGCCTATGCACGCCATCTTCCGCC--------AGAGAATCCCGGCTCCTG----------CTGC
s panTro4.chr14_AACZ03171041_random     28989 156 -     37130 CAGAATTTCCCGC--------CT------------CAA--TACCGCAATGTCTGGTGGGAAATGCAGTCTCGGCTTCCAATGACGTCACCAGCACAGGGCGGCAGGAAGGGCTCTT-------------TGCGCTTGCGCCGCCCCGCCTACGCACGCCATCTTCCGCC--------AGAGAATCCCGGCTCCTG----------CTGC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226445 173 +  10938248 TAAAACTTCCTGCGCGGGTTGCT------------AAAGGCGCCGCAGTGTCTTCTGGGAAACGTACCCTC-CCCGCCAACGACGTCG-CAGCCCAGGACCATGGACAGGGCTCTTCCGG-TGG-CTGCTGCACATGCGCCGATCCGCCCACGC-CGCCGTCTTCCTCC--------CCGTAACTGCGG-GCCTG----------CGGC
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398017 155 +  72422247 CAGAATTTCCCGC--------TT------------CAA--TACCGCAATGTCT-GTGGGAAATGCAGGCTTGGCTTCCAATGACGTCACCAGCACACGACGGCGGGAAGGGCTCTT-------------TGCGCATGCGCCGCCCCGCCCACGCCCGCCATCTTCCCCT--------AGAGAATTCCGGCTCCTG----------CCGC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522307 167 - 229590362 CAGAATTTCCCGC--------CT------------CGG--TACCGCAGTGGCTCGTGGGAAATGCCGTCGCGGCTTCCAATGACGTCACCAGCACTGGACGGTGGGAAGGGCTCTTCCGGATGG-CCTTTGCGCATGCGCCGCCCCGCCTATGC-CACCATCTTCCGCC--------AGAGACACCCGGCTCCTG----------CTGC
i rheMac3.chr1                      C 0 I 1
s macFas5.chr5_KE145639_random          41517 167 +     87690 CAGAATTTCCCGC--------CT------------CGG--TACCGCAGTGGCTCCTGGGAAATGCCGTCGCGGCTTCCAATGACGTCACCAGCACTGGACGGTGGGAAGGGCTCTTCCGGATGG-CCTTTGCGCATGCGCCGCCCCGCCTATGC-CACCATCTTCCGCC--------AGAGAAACCCGGCTCCTG----------CTGC
i macFas5.chr5_KE145639_random      C 0 I 1
s papAnu2.JH684932                     205679 167 -    231459 CAGAATTTCCCGC--------CT------------CGG--CACCGCAGTGGCTCGTGGGAAATGCCGTCGCGGCTTCCAATGACGTCACCAGCACTGGACGGTGGAAAGGGCTCTTCCGGATGG-CCTTTGCGCATGCGCCGCCCCGCCTACGC-CACCATCTTCCGCC--------AGAGAAACGCGGCTCCTG----------CTGC
i papAnu2.JH684932                  C 0 I 1
s chlSab2.chr20                     130547851 167 + 130588469 CAGAATTTCCCGC--------CT------------CGG--TACCGCAGTGGCTCGTGGGAAATGCCGTCGCGGCTTCCAATGACGTCACCAGCACTGGACGGTGGGAAGGGCTCTTCCGGATGG-CCTTTGCGCATGCGCCGCCCCGTCTAGTC-CACCATCTTCCGCC--------TGAGAAACCCGGCTCCTG----------CTGC
i chlSab2.chr20                     C 0 I 1
s nasLar1.chrUn_JMHX01277281v1            186 192 -      1016 TAAAACTTCCTGC--------GCGGGTTGCTAA--CGG--GGCCTCAGTGTCTTCTGAGAAACGTAGCCTC-CCCGCCAACNACGTCG-CAGCCCAGGACCATGGACAGGACGCTTCCGG-TGG-CTGCTGCGCATGCGCCGCCCCGCCCACGC-CGCCATCTTCCTCCCAGTAACGCGAGGCTTGCGGCTCTTGCGCTGTTTCCCTGC
i nasLar1.chrUn_JMHX01277281v1      C 0 I 1
s calJac3.chr1                      174282531 164 + 210400635 AAGAACTTCCCGC--------CT------------CAG--TACCGCAAGGTCTCTTGGGAAACGCAGTTTCGGCTCCCAATGACGTCACCAGCACAGGATGGTGGGAAGGGCCTTT-----TGGATTTTTGCACATGCACCGCCCCACCCACTTCCGCAATCTTCCGCC--------CGAGAATCTCAGCTGTTA----------CTGC
i calJac3.chr1                      C 0 I 1
s tupBel1.scaffold_67797.1-4931          1202 165 +      4931 TAAAACTTCCTCC--------GTTTGTGGCTAACGGAA--GACCGCAGAGGGTTGTGGGAAATGTAGTCTCGCGCTCCAGTGACGTAATCAGTACCGGACTGAAGAAAGGGCTCTTCCGG-TTT-CGTCTGCGCTTGTGTTGTTCAGTCCGCTCGCGCCATTTTCGTCG----------------------TCTT----------TCGC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40432 326 -     43889 I
e otoGar3.GL873668                    4656197   0 +   4854515 I

a score=54.000000
s hg38.chr14_KI270722v1_random         183346 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     29145 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226618 1 +  10938248 T
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398172 1 +  72422247 A
i ponAbe2.chrUn                     C 0 C 0
s tupBel1.scaffold_67797.1-4931          1367 1 +      4931 A
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174282695 1 + 210400635 I
e nasLar1.chrUn_JMHX01277281v1            378 1 -      1016 I
e micMur1.scaffold_18511                40432 326 -     43889 I
e otoGar3.GL873668                    4656197 0 +   4854515 I
e chlSab2.chr20                     130548018 1 + 130588469 I
e papAnu2.JH684932                     205846 1 -    231459 I
e macFas5.chr5_KE145639_random          41684 1 +     87690 I
e rheMac3.chr1                      225522474 1 - 229590362 I

a score=216475.000000
s hg38.chr14_KI270722v1_random         183347 90 +    194050 ATGGAGAGGCTGCTCTGGAAG--CTCTGGCATTGGG--GTCTTCATCCCTGCAGGTTGGTGGCAGGATGAAACAGGAGA-CAGCGGGCTTGGAGG
s panTro4.chr14_AACZ03171041_random     29146 90 -     37130 ATGGAGAGGCTGCTCTGGAAG--CTCTGGCATTGGG--GTCTTCATCCCTGCAGGTTGGTGGTAGGATGAAACAGGAGA-CAGCGGGCTTGGAGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226619 89 +  10938248 CTTGTGCCGCTTCCCTGCGAG---GCTGGGGTTGGA--CTGGGATTCTCTGAAGGTTGGTGCCATGGTGGAAGAGGAGC-CCGTGGGCCTCGGGG
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398173 92 +  72422247 ATGGAGAGGGTTCTCTGGAAG--CTCTGGGGTTGGGATCTCTTCGTCCCTGCAGGTCGGTGGTAGGATGAAACAGGAGA-CAGCGGGCTTGGAGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522475 90 - 229590362 GTCCAGAGGCTGCTCTGGAAG--CTCTGGGGTTGGG--GTGTTCATCCCTGCAGGTTGGTGGTAGGATGAAACAGGACA-CAGCGGGCTTGGAGG
i rheMac3.chr1                      I 1 C 0
s macFas5.chr5_KE145639_random          41685 90 +     87690 GTCCAGAGGCTGCTCTGGAAG--CTCTGGGGTTGGG--GTGTTCATCCCTGCAGGTTGGTGGTAGGATGAAACAGGACA-CAGCGGGCTTGGAGG
i macFas5.chr5_KE145639_random      I 1 C 0
s papAnu2.JH684932                     205847 90 -    231459 GTCAAGAGGCTGCTCTGGAAG--CTCCGGGGTTGGG--GTGTTCATCCCTGCAGGTTGGTGGTAGGATGAAACCGGAGA-CAGCGGGCTTGGAGG
i papAnu2.JH684932                  I 1 C 0
s chlSab2.chr20                     130548019 90 + 130588469 GTCAAGAGGCTGCTCTGGAAG--CTCTGGGGTTGGG--GTGTTCATCCCTGCAGGCTGGTGGTAGGATGAAACCGGAGA-CAGCGGGCTTGGAGG
i chlSab2.chr20                     I 1 C 0
s nasLar1.chrUn_JMHX01277281v1            379 70 -      1016 ------AGGCTG----GGG-------TTGGATTGGG--G----CTTCTCTGAAGGTTGGTGCCACGGTAGAAGAAGAGC-CTGTGGGCCTCG-GG
i nasLar1.chrUn_JMHX01277281v1      I 1 C 0
s calJac3.chr1                      174282696 90 + 210400635 ATTGAAAGGCGGCTCTTCAGT--CTCTGAGGTGGGT--GTCTTCGTCCCTGCTAGTTGGTGGTAGGATGAAACAGGAAC-TGGCGGGCTTGGGGG
i calJac3.chr1                      I 1 C 0
s tupBel1.scaffold_67797.1-4931          1368 88 +      4931 -----AAGTTCTCTCTTGTTGGCGTCTGTGACTGGA--TGCTGTGTCCGTGAAGGTTGGCCCGAGGGTGAGAGAGGAGGTCCCCGGGCCTCGGGA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40432 326 -     43889 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=41961.000000
s hg38.chr14_KI270722v1_random         183437 12 +    194050 CACCATAGGGAG
s panTro4.chr14_AACZ03171041_random     29236 12 -     37130 CACCATAGGGGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226708 11 +  10938248 GACC-CGGGGGG
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398265 12 +  72422247 CACCATAGGGAG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522565 12 - 229590362 CACCATAGGGAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41775 12 +     87690 CACCATAGGGAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205937 12 -    231459 CACCATAGGGAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548109 12 + 130588469 CACCATAGGGAG
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            449 12 -      1016 CGTCCCGGGGGG
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282786 12 + 210400635 CGCCCTAGGGAG
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_49734                 3889 12 +      5713 TACCTCAGGGAG
i micMur1.scaffold_49734            n 326 I 98
s tupBel1.scaffold_67797.1-4931          1456 11 +      4931 CACC-CAGGGTG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=244563.000000
s hg38.chr14_KI270722v1_random         183449 88 +    194050 GCGGGGCTGACGTGCCAC-AG-TTGGTGGGAGC--AGAGGCGTGGGCACATCTC-----AGGGG-ACGGGGCCTGACGCACAGGTGCGGGCCGCGGAC
s panTro4.chr14_AACZ03171041_random     29248 87 -     37130 GCGGGGCTGACGTGCCAC-TG-TTGGTGGGAGC--AGAGGCGTGGGCACATCTC-----GGGGG--CGGGGCCTGACGCACAGGTGCGGGCCGCGGAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226719 87 +  10938248 ATGGGACGGGCATCCCAC-TACTTGGTGGGAAC--AGAAACTTGGGTGGCCTTC-----AACGG--TGCGTCCTTACATGCACGTGCGGGCCG-GGGC
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398277 89 +  72422247 GCGGGGCTGACGTGCCAC-AG-TTGGTGGGAGC--AGAGGCGCGGGCACATCTC-----AGGGGGGCGGGGCCTGACGCGCAGGTGCGGGCCGCGGAC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522577 91 - 229590362 GCGGGGCCGACGTGCCCC-AG-TTGGTGGGAGC--AGAGGCGTGGGCACATCTC-GGGGGAGGG--CGGGGCCTGACGCGCAGGTGCGGGCGGCGGAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41787 91 +     87690 GCGGGGCCGACGTGCCCC-AG-TTGGTGGGAGC--AGAGGCGTGGGCACATCTC-GGGGGAGGG--CGGGGCCTGACGCGCAGGTGCGGGCGGCGGAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     205949 92 -    231459 GCGGGGCCGACGTGCCAC-AG-TTGGTGGGAGC--AGAGGCGTGGGCACATCTCgggggggggg--CGGGGCCTGACGCGCAGGTGCGGGCGGCGGAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548121 87 + 130588469 GCGGG--CGACGTGCCAC-AG-TTGGTGGGAGC--AGAGGCGTGGGCACATCTC---GAGGGGG--CGGGGCCTGACGCGCAGGTGCAGGCGGCGGTG
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            461 88 -      1016 GTGGGACAGGCATCCAACTAC-TTGATGGGAAC--GGAAACGTGGGTGGCCTTC-----AAGGG--CACGTCCTTACGTGCATGTGCGGGTGGGGGCC
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282798 89 + 210400635 ACGGGACCGATGTGCCAC-AG-TTGATGGGAGC--AGAGGCGTGGGCGCATCCC---GGGAGGG--CGGGACCTGATGTACAGGTGAGTGTAGCGGAC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1467 89 +      4931 GCGGGACTGGTGCCCATC-AGCCTAGTGGGAGCTGAGAGCCTCTGG---ACCTC---GGGCCGG--CGGGAGCTGAAGTGCAGGTGCGAGCCTCGGAC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 3901 98 +      5713 I
e otoGar3.GL873668                    4656197  0 +   4854515 I

a score=1749.000000
s hg38.chr14_KI270722v1_random         183537 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29335 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226806 1 +  10938248 C
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398366 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522668 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41878 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206041 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548208 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            549 1 -      1016 C
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282887 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124918 1 -    169463 T
i tarSyr2.KE946707v1                N 0 C 0
s tupBel1.scaffold_67797.1-4931          1556 1 +      4931 C
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 3901 98 +      5713 I
e otoGar3.GL873668                    4656197 0 +   4854515 I

a score=998.000000
s hg38.chr14_KI270722v1_random         183538 4 +    194050 CAGG
s panTro4.chr14_AACZ03171041_random     29336 4 -     37130 CAGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226807 4 +  10938248 CAGG
i panPan1.JH650451                  C 0 C 0
s ponAbe2.chrUn                      64398367 4 +  72422247 CAGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522669 4 - 229590362 AGCG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41879 4 +     87690 AGCG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206042 4 -    231459 AGCG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548209 4 + 130588469 AGCG
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            550 3 -      1016 AG-G
i nasLar1.chrUn_JMHX01277281v1      C 0 C 0
s calJac3.chr1                      174282888 4 + 210400635 CGGG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124919 4 -    169463 GGCG
i tarSyr2.KE946707v1                C 0 C 0
s otoGar3.GL873804                    1005308 4 -   1077187 TGGG
i otoGar3.GL873804                  I 8116 I 1
s tupBel1.scaffold_67797.1-4931          1557 4 +      4931 TGGG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 3901 98 +      5713 I

a score=6600.000000
s hg38.chr14_KI270722v1_random         183542 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29340 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3226811 1 +  10938248 C
i panPan1.JH650451                  C 0 I 17058
s ponAbe2.chrUn                      64398371 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522673 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41883 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206046 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548213 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s nasLar1.chrUn_JMHX01277281v1            553 1 -      1016 C
i nasLar1.chrUn_JMHX01277281v1      C 0 N 0
s calJac3.chr1                      174282892 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124923 1 -    169463 C
i tarSyr2.KE946707v1                C 0 C 0
s tupBel1.scaffold_67797.1-4931          1561 1 +      4931 C
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 3901 98 +      5713 I
e otoGar3.GL873804                    1005312 1 -   1077187 I

a score=-1341.000000
s hg38.chr14_KI270722v1_random         183543  3 +    194050 ------------------------TGG----------
s panTro4.chr14_AACZ03171041_random     29341  3 -     37130 ------------------------TGG----------
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398372  3 +  72422247 ------------------------TGG----------
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522674  3 - 229590362 ------------------------TGG----------
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41884  3 +     87690 ------------------------TGG----------
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206047  3 -    231459 ------------------------TGG----------
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548214  3 + 130588469 ------------------------TGG----------
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282893  3 + 210400635 ------------------------GGG----------
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124924  3 -    169463 ------------------------TGG----------
i tarSyr2.KE946707v1                C 0 C 0
s micMur1.scaffold_49734                 3999  3 +      5713 ------------------------TGG----------
i micMur1.scaffold_49734            I 98 C 0
s otoGar3.GL873804                    1005313  3 -   1077187 ------------------------CGA----------
i otoGar3.GL873804                  I 1 I 34
s tupBel1.scaffold_67797.1-4931          1562 37 +      4931 GGGTAGCCAAGACCCGCGGGAAAGTGGGGAGCCACAG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I

a score=5500.000000
s hg38.chr14_KI270722v1_random         183546 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     29344 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398375 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522677 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41887 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206050 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548217 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282896 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124927 1 -    169463 G
i tarSyr2.KE946707v1                C 0 C 0
s micMur1.scaffold_49734                 4002 1 +      5713 G
i micMur1.scaffold_49734            C 0 I 22
s tupBel1.scaffold_67797.1-4931          1599 1 +      4931 G
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005316 34 -   1077187 I

a score=11085.000000
s hg38.chr14_KI270722v1_random         183547 6 +    194050 GCTGAA
s panTro4.chr14_AACZ03171041_random     29345 6 -     37130 GCTGAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398376 6 +  72422247 GCTGAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522678 6 - 229590362 GCTAAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41888 6 +     87690 GCTAAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206051 6 -    231459 GCTAAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548218 6 + 130588469 GCTAAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282897 6 + 210400635 GCTGAA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124928 1 -    169463 G-----
i tarSyr2.KE946707v1                C 0 C 0
s tupBel1.scaffold_67797.1-4931          1600 6 +      4931 ACTGCA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 4003 22 +      5713 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005316 34 -   1077187 I

a score=16868.000000
s hg38.chr14_KI270722v1_random         183553 4 +    194050 AGGG
s panTro4.chr14_AACZ03171041_random     29351 4 -     37130 AGGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398382 4 +  72422247 AGGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522684 4 - 229590362 AGGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41894 4 +     87690 AGGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206057 4 -    231459 AGGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548224 4 + 130588469 AGGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282903 4 + 210400635 AGGG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124929 4 -    169463 AGGG
i tarSyr2.KE946707v1                C 0 C 0
s micMur1.scaffold_49734                 4025 2 +      5713 --AG
i micMur1.scaffold_49734            I 22 I 2
s otoGar3.GL873804                    1005350 2 -   1077187 --AG
i otoGar3.GL873804                  I 34 I 87
s tupBel1.scaffold_67797.1-4931          1606 4 +      4931 GGGG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I

a score=17052.000000
s hg38.chr14_KI270722v1_random         183557 11 +    194050 TG-------------------------------------------GCGCTGCTG
s panTro4.chr14_AACZ03171041_random     29355 11 -     37130 CG-------------------------------------------GCGCTGCTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398386 11 +  72422247 CG-------------------------------------------GCGCTGCTG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522688 11 - 229590362 CG-------------------------------------------GCGCTGCTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41898 11 +     87690 CG-------------------------------------------GCGCTGCTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206061 11 -    231459 CG-------------------------------------------GCGCTGCTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548228 11 + 130588469 CG-------------------------------------------GCGCTGCTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282907 11 + 210400635 CG-------------------------------------------GCGCTGTTG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124933 54 -    169463 CGCGACGCGGGCCGGGCTGCCCGCGGCCGCCTTGCCAGAGACGGCGCGCTGCCC
i tarSyr2.KE946707v1                C 0 C 0
s micMur1.scaffold_49734                 4029 19 +      5713 -----------------------------------TGCAGATGGCGCACTTCCA
i micMur1.scaffold_49734            I 2 n 2
s tupBel1.scaffold_67797.1-4931          1610 10 +      4931 -G-------------------------------------------GCGCCTCGG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005352 87 -   1077187 I

a score=223.000000
s hg38.chr14_KI270722v1_random         183568 2 +    194050 GG-
s panTro4.chr14_AACZ03171041_random     29366 2 -     37130 GG-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398397 2 +  72422247 GG-
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522699 2 - 229590362 GG-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41909 2 +     87690 GG-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206072 2 -    231459 TG-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548239 2 + 130588469 GG-
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282918 2 + 210400635 GG-
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   124987 2 -    169463 GC-
i tarSyr2.KE946707v1                C 0 I 64
s tupBel1.scaffold_67797.1-4931          1620 2 +      4931 -GT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 4048 2 +      5713 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005352 87 -   1077187 I

a score=99007.000000
s hg38.chr14_KI270722v1_random         183570 40 +    194050 AGGGCGGGC-------------------------------------GTGGGATCCCAGTACTGAAGCCAGTTCCAGA
s panTro4.chr14_AACZ03171041_random     29368 40 -     37130 AGGGCGGGC-------------------------------------GTGGGATCCCGGTACTGAAGCCAGTTCCAGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398399 40 +  72422247 AGGGCGGGC-------------------------------------GTGGGATCCCGGTACTGAAGCCAGTTCCAGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522701 40 - 229590362 AGGGCGGGC-------------------------------------GTGGGATCTCGGCACTGAAGCCAGTTCCAGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41911 40 +     87690 AGGGCGGGC-------------------------------------GTGGGATCTCGGCACTGAAGCCAGTTCCAGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206074 40 -    231459 AGGGCGGGC-------------------------------------GTGGGATCCCGGCACTGAAGCCAGTTCCAGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548241 40 + 130588469 AGGGCGGGC-------------------------------------GTGGGATCCCGGCACTGAAGCCAGTTCCAGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282920 40 + 210400635 AGGGCGGGC-------------------------------------GTGGGGTCCTGGCTCTGAAGCCAGTTCCAGA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1622 75 +      4931 --AGCGGGTCCAGTGATTGCTTTGTCAGAAGGTGGTGCGCTGTTAGGCGGGGTGTGTGCACAAAGCCTTGTTCCAGA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_49734                 4048  2 +      5713 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   124989 64 -    169463 I
e otoGar3.GL873804                    1005352 87 -   1077187 I

a score=7549.000000
s hg38.chr14_KI270722v1_random         183610 5 +    194050 GACAC--
s panTro4.chr14_AACZ03171041_random     29408 5 -     37130 GACGC--
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398439 5 +  72422247 GACGC--
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522741 5 - 229590362 GGCGC--
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41951 5 +     87690 GGCGC--
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206114 5 -    231459 GGCGC--
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548281 5 + 130588469 GGCGC--
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282960 5 + 210400635 AGCGC--
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40758 5 -     43889 GTCTC--
i micMur1.scaffold_18511            I 326 I 40
s tupBel1.scaffold_67797.1-4931          1697 7 +      4931 AGCTCGC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   124989 64 -    169463 I
e otoGar3.GL873804                    1005352 87 -   1077187 I

a score=69736.000000
s hg38.chr14_KI270722v1_random         183615 28 +    194050 CGGAGTGGGTGGGTG-----AAGCCGGTGGCGC
s panTro4.chr14_AACZ03171041_random     29413 28 -     37130 CGGAGCGGGTGGGCG-----AAGCCGGTGGCGC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398444 28 +  72422247 CGGAGCGGGTGGGCG-----AAGCCGGTGGCGC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522746 28 - 229590362 CGGAGCGGGTGGGCG-----AAGCCGGTGGCGC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41956 28 +     87690 CGGAGCGGGTGGGCG-----AAGCCGGTGGCGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206119 28 -    231459 CGGAGCGGGTGGGCG-----AAGCCAGTGGCGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548286 28 + 130588469 CGGAGCGGGTGGGCG-----AAGCGGGTGGCGC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282965 28 + 210400635 CGGAGACGGGGAGCG-----AGGCCAGTGGCGC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1704 33 +      4931 CTGACTGGGTGGTCGAGTTTAAGATGGCGACGA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40763 40 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   124989 64 -    169463 I
e otoGar3.GL873804                    1005352 87 -   1077187 I

a score=6895.000000
s hg38.chr14_KI270722v1_random         183643 2 +    194050 AG
s panTro4.chr14_AACZ03171041_random     29441 2 -     37130 AG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398472 2 +  72422247 GG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522774 2 - 229590362 GG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41984 2 +     87690 GG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206147 2 -    231459 GG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548314 2 + 130588469 GG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282993 2 + 210400635 GG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   125053 2 -    169463 GG
i tarSyr2.KE946707v1                I 64 C 0
s tupBel1.scaffold_67797.1-4931          1737 2 +      4931 GG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40763 40 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005352 87 -   1077187 I

a score=1618.000000
s hg38.chr14_KI270722v1_random         183645 3 +    194050 -GGA
s panTro4.chr14_AACZ03171041_random     29443 3 -     37130 -GGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398474 3 +  72422247 -GGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522776 3 - 229590362 -GGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41986 3 +     87690 -GGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206149 3 -    231459 -GGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548316 3 + 130588469 -GGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282995 3 + 210400635 -GGA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   125055 2 -    169463 -GG-
i tarSyr2.KE946707v1                C 0 I 26
s otoGar3.GL873804                    1005439 2 -   1077187 -AG-
i otoGar3.GL873804                  I 87 C 0
s tupBel1.scaffold_67797.1-4931          1739 3 +      4931 AGG-
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40763 40 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I

a score=-100.000000
s hg38.chr14_KI270722v1_random         183648 1 +    194050 -C
s panTro4.chr14_AACZ03171041_random     29446 1 -     37130 -C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398477 1 +  72422247 -C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522779 1 - 229590362 -C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41989 1 +     87690 -C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206152 1 -    231459 -C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548319 1 + 130588469 -C
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282998 1 + 210400635 -C
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40803 1 -     43889 -C
i micMur1.scaffold_18511            I 40 C 0
s otoGar3.GL873804                    1005441 1 -   1077187 -C
i otoGar3.GL873804                  C 0 I 54
s tupBel1.scaffold_67797.1-4931          1742 1 +      4931 G-
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125057 26 -    169463 I

a score=10216.000000
s hg38.chr14_KI270722v1_random         183649 3 +    194050 GGG
s panTro4.chr14_AACZ03171041_random     29447 3 -     37130 GGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398478 3 +  72422247 AGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522780 3 - 229590362 GGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41990 3 +     87690 GGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206153 3 -    231459 GGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548320 3 + 130588469 GGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174282999 3 + 210400635 AGG
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40804 3 -     43889 GGG
i micMur1.scaffold_18511            C 0 I 126
s tupBel1.scaffold_67797.1-4931          1743 3 +      4931 GGG
i tupBel1.scaffold_67797.1-4931     C 0 I 1
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125057 26 -    169463 I
e otoGar3.GL873804                    1005442 54 -   1077187 I

a score=36425.000000
s hg38.chr14_KI270722v1_random         183652 15 +    194050 GTCTGCAGGCTGGCC
s panTro4.chr14_AACZ03171041_random     29450 15 -     37130 GTCTGCAGGCCGGCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398481 15 +  72422247 GTCTGCAGGCCACCC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522783 15 - 229590362 ATCTGCAGGCCGCCC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          41993 15 +     87690 ATCTGCAGGCCGCCC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206156 15 -    231459 GTCTGCAGGCCGCCC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548323 15 + 130588469 ATCTGCAGGCCGTCC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283002 14 + 210400635 GTCTGCAGGCCG-CT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1747 15 +      4931 GTCTGCAGACTGCCG
i tupBel1.scaffold_67797.1-4931     I 1 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125057 26 -    169463 I
e otoGar3.GL873804                    1005442 54 -   1077187 I

a score=30417.000000
s hg38.chr14_KI270722v1_random         183667 12 +    194050 GAGCCTGGGAGG
s panTro4.chr14_AACZ03171041_random     29465 12 -     37130 GAGCCTGGGAGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398496 12 +  72422247 GAGCCTGGGAGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522798 12 - 229590362 CTACCTGGGAGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42008 12 +     87690 CTACCTGGGAGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206171 12 -    231459 CTACCTGGGAGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548338 11 + 130588469 C-ACCTGGGAGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283016 12 + 210400635 GAGCCTGGAAGC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   125083 12 -    169463 GAGCCTGGGAGG
i tarSyr2.KE946707v1                I 26 I 7
s tupBel1.scaffold_67797.1-4931          1762 12 +      4931 GAGCGTGGGAGG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005442 54 -   1077187 I

a score=8144.000000
s hg38.chr14_KI270722v1_random         183679 3 +    194050 TCT
s panTro4.chr14_AACZ03171041_random     29477 3 -     37130 TCT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398508 3 +  72422247 TCT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522810 3 - 229590362 TCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42020 3 +     87690 TCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206183 3 -    231459 TCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548349 3 + 130588469 TCT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283028 3 + 210400635 TCT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1774 1 +      4931 --T
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125095 7 -    169463 I
e otoGar3.GL873804                    1005442 54 -   1077187 I

a score=35308.000000
s hg38.chr14_KI270722v1_random         183682 12 +    194050 GCGGGGAGGC---TG
s panTro4.chr14_AACZ03171041_random     29480 12 -     37130 GCGGGGAGGC---TG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398511 12 +  72422247 GCGGGGAGGC---TG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522813 12 - 229590362 GCGGGGAGGC---TG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42023 12 +     87690 GCGGGGAGGC---TG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206186 12 -    231459 GCGGGGAGGC---TG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548352 12 + 130588469 GCGGGGAGGC---TG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283031 12 + 210400635 GCGGGGAGGC---CG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   125102 15 -    169463 GCGCGGTCGCGTGTG
i tarSyr2.KE946707v1                I 7 I 62
s tupBel1.scaffold_67797.1-4931          1775 12 +      4931 GTGGGGTGTC---AG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005442 54 -   1077187 I

a score=28817.000000
s hg38.chr14_KI270722v1_random         183694 15 +    194050 ----CGCTCTGGCACTGCA---
s panTro4.chr14_AACZ03171041_random     29492 15 -     37130 ----CGCTCCGGCACTGCA---
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398523 15 +  72422247 ----CGCTCCCGCACTGCA---
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522825 15 - 229590362 ----CGCTCCGGCACCGCA---
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42035 15 +     87690 ----CGCTCCGGCACCGCA---
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206198 15 -    231459 ----CGCTCCGGCACCGCA---
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548364 15 + 130588469 ----CGCTCCGGCACCGCA---
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283043 15 + 210400635 ----CGCTCCGGCGCTCCA---
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1787 22 +      4931 TTCACATGACAGCTCTCCTAAG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125117 62 -    169463 I
e otoGar3.GL873804                    1005442 54 -   1077187 I

a score=15976.000000
s hg38.chr14_KI270722v1_random         183709 5 +    194050 TGGAC
s panTro4.chr14_AACZ03171041_random     29507 5 -     37130 TGGAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398538 5 +  72422247 TGGAC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522840 5 - 229590362 TGGAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42050 5 +     87690 TGGAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206213 5 -    231459 TGGAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548379 5 + 130588469 TGGAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283058 5 + 210400635 TGGAC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005496 5 -   1077187 TGTGC
i otoGar3.GL873804                  I 54 I 18
s tupBel1.scaffold_67797.1-4931          1809 5 +      4931 GGGGC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125117 62 -    169463 I

a score=45857.000000
s hg38.chr14_KI270722v1_random         183714 20 +    194050 CTTGT----------GTGGCATTCCGTGCA
s panTro4.chr14_AACZ03171041_random     29512 20 -     37130 CTTGT----------GCGGCGTTCCGTGCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398543 20 +  72422247 CTTGT----------GCGGCGTTCCATGCA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522845 20 - 229590362 CTTGT----------GCGGCATTCCATGCA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42055 20 +     87690 CTTGT----------GCGGCATTCCATGCA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206218 20 -    231459 CTTGT----------GCGGCATTCCGTGCA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548384 20 + 130588469 CTTGT----------GCGGCATTCCCTGCA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283063 30 + 210400635 CTTGTGGTAACCTGCGCGGCGTTCCGTGCA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1814 29 +      4931 -CTGTTACTAAGCATGTGGCATTCAGTTCA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125117 62 -    169463 I
e otoGar3.GL873804                    1005501 18 -   1077187 I

a score=18184.000000
s hg38.chr14_KI270722v1_random         183734 8 +    194050 CGCCCTTG
s panTro4.chr14_AACZ03171041_random     29532 8 -     37130 CGCCCTTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398563 8 +  72422247 CGCCCTTG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522865 8 - 229590362 CCCCCTTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42075 8 +     87690 CCCCCTTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206238 8 -    231459 CCCCCCTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548404 8 + 130588469 CCCCCTTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283093 8 + 210400635 CCCCCCTG
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005519 8 -   1077187 TAACCTTG
i otoGar3.GL873804                  I 18 I 101
s tupBel1.scaffold_67797.1-4931          1843 8 +      4931 ATCGTCTG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125117 62 -    169463 I

a score=15980.000000
s hg38.chr14_KI270722v1_random         183742 5 +    194050 TAAGG
s panTro4.chr14_AACZ03171041_random     29540 5 -     37130 TAAGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398571 5 +  72422247 TAAGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522873 5 - 229590362 TAAGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42083 5 +     87690 TAAGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206246 5 -    231459 TAAGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548412 5 + 130588469 TAAGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283101 5 + 210400635 TAAGG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1851 5 +      4931 TAAAG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125117 62 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=4095.000000
s hg38.chr14_KI270722v1_random         183747 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29545 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398576 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522878 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42088 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206251 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548417 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283106 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   125179 1 -    169463 T
i tarSyr2.KE946707v1                I 62 I 904
s tupBel1.scaffold_67797.1-4931          1856 1 +      4931 T
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=18957.000000
s hg38.chr14_KI270722v1_random         183748 13 +    194050 -------CAGCATACGGACA
s panTro4.chr14_AACZ03171041_random     29546 13 -     37130 -------CAGCATACGGACA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398577 12 +  72422247 -------CAGCATAGGGA-A
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522879 13 - 229590362 -------CAGCATACGGACA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42089 13 +     87690 -------CAGCATACGGACA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206252 13 -    231459 -------CAGGATACGGACA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548418 13 + 130588469 -------CGGCATACGGACA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283107 13 + 210400635 -------CAGCATGCGGACG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1857 12 +      4931 GAGGCTGTACCA--------
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40807 126 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=3321.000000
s hg38.chr14_KI270722v1_random         183761 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     29559 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398589 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522892 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42102 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206265 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548431 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283120 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                40933 1 -     43889 A
i micMur1.scaffold_18511            I 126 I 34
s tupBel1.scaffold_67797.1-4931          1869 1 +      4931 G
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=9812.000000
s hg38.chr14_KI270722v1_random         183762 8 +    194050 TTGTAG-GG
s panTro4.chr14_AACZ03171041_random     29560 8 -     37130 TTGTAG-GG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398590 8 +  72422247 TTCTAG-GG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522893 8 - 229590362 TTCTAG-GA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42103 8 +     87690 TTCTAG-GA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206266 8 -    231459 TTCTAG-GA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548432 8 + 130588469 TTCTAG-GA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283121 8 + 210400635 TTTTAG-GG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1870 8 +      4931 AACTAGT-G
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40934 34 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=47272.000000
s hg38.chr14_KI270722v1_random         183770 15 +    194050 AGATGCCCCT-CATTC
s panTro4.chr14_AACZ03171041_random     29568 15 -     37130 AGATGCCCCT-CATTC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    251 16 +      1597 aaatGCCCCCAAATTC
i gorGor3.CABD02457869              N 0 C 0
s ponAbe2.chrUn                      64398598 15 +  72422247 AGATGTCCCT-CATTC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522901 15 - 229590362 AGATGCCCCT-CATTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42111 15 +     87690 AGATGCCCCT-CATTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206274 15 -    231459 ACATGCCCCT-CATTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548440 15 + 130588469 AGATGCCCCT-CATTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283129 15 + 210400635 AGATGCCCCT-CGTTC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          1878 15 +      4931 AAATGCTCCC-AGTTC
i tupBel1.scaffold_67797.1-4931     C 0 I 866
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40934 34 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=23330.000000
s hg38.chr14_KI270722v1_random         183785 9 +    194050 CCAGACGAG
s panTro4.chr14_AACZ03171041_random     29583 9 -     37130 CCAGACGAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    267 9 +      1597 TCAGAGAAG
i gorGor3.CABD02457869              C 0 I 1
s ponAbe2.chrUn                      64398613 9 +  72422247 CCAGACGAG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522916 9 - 229590362 CCAGATGAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42126 9 +     87690 CCAGATGAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206289 9 -    231459 CCAGATGAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548455 9 + 130588469 CCAGATGAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283144 9 + 210400635 CCAGAGTAG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           638 8 -      8353 CCAGAGAA-
i tupBel1.scaffold_85531.1-8353     n 866 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40934 34 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=917.000000
s hg38.chr14_KI270722v1_random         183794 2 +    194050 GA-
s panTro4.chr14_AACZ03171041_random     29592 2 -     37130 GA-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    277 2 +      1597 AA-
i gorGor3.CABD02457869              I 1 C 0
s ponAbe2.chrUn                      64398622 2 +  72422247 GA-
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522925 2 - 229590362 GA-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42135 2 +     87690 GA-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206298 2 -    231459 GA-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548464 2 + 130588469 GA-
i chlSab2.chr20                     C 0 C 0
s micMur1.scaffold_18511                40968 2 -     43889 TA-
i micMur1.scaffold_18511            I 34 I 21
s tupBel1.scaffold_85531.1-8353           646 2 -      8353 -AC
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174283153 0 + 210400635 C
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=37223.000000
s hg38.chr14_KI270722v1_random         183796 18 +    194050 --GTACGAAGTGCGTGCACA
s panTro4.chr14_AACZ03171041_random     29594 18 -     37130 --GTACGAAGCGCATGCACA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    279 18 +      1597 --TTATGAAGTGTATACAGA
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398624 18 +  72422247 --GTATGAAGCGCGTGCACA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522927 18 - 229590362 --GTACGAAGCGCGTGCACA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42137 18 +     87690 --GTACGAAGCGCGTGCACA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206300 18 -    231459 --GTCCGAAGCGCGTGCACA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548466 18 + 130588469 --GTACCAAGCGCGTGCACA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283153 10 + 210400635 ----------CGCGTGCACA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           648 18 -      8353 GCTCGTGAAGTGTG--CAGA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40970 21 -     43889 I
e panPan1.JH650451                    3226812 17058 +  10938248 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=5260.000000
s hg38.chr14_KI270722v1_random         183814 2 +    194050 CA
s panTro4.chr14_AACZ03171041_random     29612 2 -     37130 CC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650567                      20268 2 -     44305 CT
i panPan1.JH650567                  n 17058 I 66
s gorGor3.CABD02457869                    297 2 +      1597 CT
i gorGor3.CABD02457869              C 0 I 3
s ponAbe2.chrUn                      64398642 2 +  72422247 CC
i ponAbe2.chrUn                     C 0 I 4
s rheMac3.chr1                      225522945 2 - 229590362 CC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42155 2 +     87690 CC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206318 2 -    231459 CC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548484 2 + 130588469 CC
i chlSab2.chr20                     C 0 C 0
s micMur1.scaffold_18511                40991 2 -     43889 CA
i micMur1.scaffold_18511            I 21 I 48
s tupBel1.scaffold_85531.1-8353           666 2 -      8353 CC
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174283163 0 + 210400635 C
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=-4786.000000
s hg38.chr14_KI270722v1_random         183816 2 +    194050 A-T
s panTro4.chr14_AACZ03171041_random     29614 2 -     37130 G-T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    302 2 +      1597 C-C
i gorGor3.CABD02457869              I 3 C 0
s ponAbe2.chrUn                      64398648 2 +  72422247 G-T
i ponAbe2.chrUn                     I 4 C 0
s rheMac3.chr1                      225522947 2 - 229590362 G-T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42157 2 +     87690 G-T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206320 2 -    231459 G-T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548486 2 + 130588469 G-T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283163 2 + 210400635 G-T
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           668 2 -      8353 AG-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=2552.000000
s hg38.chr14_KI270722v1_random         183818 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29616 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    304 1 +      1597 T
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398650 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522949 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42159 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206322 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548488 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s tupBel1.scaffold_85531.1-8353           670 1 -      8353 C
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e calJac3.chr1                      174283165 0 + 210400635 C
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=8138.000000
s hg38.chr14_KI270722v1_random         183819 2 +    194050 CT
s panTro4.chr14_AACZ03171041_random     29617 2 -     37130 CT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    305 2 +      1597 TT
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398651 2 +  72422247 CT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522950 2 - 229590362 CT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42160 2 +     87690 CT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206323 2 -    231459 CT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548489 2 + 130588469 CT
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr13                      93806332 2 - 126811233 TT
i nasLar1.chr13                     N 0 N 0
s calJac3.chr1                      174283165 2 + 210400635 CT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           671 2 -      8353 CT
i tupBel1.scaffold_85531.1-8353     C 0 I 5
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=99530.000000
s hg38.chr14_KI270722v1_random         183821 38 +    194050 ACTA----CCTGGCGAGTGTATTAGTAGGGTTTCCCGGTGTG
s panTro4.chr14_AACZ03171041_random     29619 38 -     37130 ACTA----CCTGGCGAGTGTATTAGTAGGGTTTCCCGGTGTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    307 38 +      1597 ACTA----TGTAACAGTTGCATTTGTGAGGTTTCTTCGTGTC
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398653 38 +  72422247 ACTA----CTTGGCGAGTGTATTTGTAGGGTTTCCCGGTGTC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522952 38 - 229590362 ACTA----CCTGGCGAGGGTATTAGTGGGGTTTCCCGGTGTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42162 38 +     87690 ACTA----CCTGGCGAGGGTATTAGTGGGGTTTCCCGGTGTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206325 38 -    231459 ACTA----CCTGGCGAGTGTATTAGTGGGGTTTCCCGGTGTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548491 38 + 130588469 ACTA----CCTGGCGAGTGTATTAGTGGGGTTTCCTGGTGTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283167 42 + 210400635 AATAAAATCTTGGCGATTTTATTAGTTGGGTTTCCCAGTGTC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           678 37 -      8353 ACTA----TGT-GCAGTTTCACTTGTGGGGGTTCTTGCTGTC
i tupBel1.scaffold_85531.1-8353     I 5 C 0
e rhiRox1.KN297764v1                   424831 6467 -    492427 I
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=5005.000000
s hg38.chr14_KI270722v1_random         183859 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29657 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    345 1 +      1597 T
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398691 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522990 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42200 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206363 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548529 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   431298 1 -    492427 T
i rhiRox1.KN297764v1                I 6467 I 143
s calJac3.chr1                      174283209 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           715 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                   125180 904 -    169463 I
e otoGar3.GL873804                    1005527 101 -   1077187 I

a score=1826.000000
s hg38.chr14_KI270722v1_random         183860 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29658 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    346 1 +      1597 C
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398692 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522991 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42201 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206364 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548530 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283210 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45215 1 +    169463 C
i tarSyr2.KE946707v1                n 904 I 56
s otoGar3.GL873804                    1005628 1 -   1077187 C
i otoGar3.GL873804                  I 101 I 19
s tupBel1.scaffold_85531.1-8353           716 1 -      8353 C
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I

a score=2997.000000
s hg38.chr14_KI270722v1_random         183861 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29659 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    347 1 +      1597 T
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398693 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522992 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42202 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206365 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548531 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283211 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           717 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                40993 48 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005629 19 -   1077187 I

a score=10505.000000
s hg38.chr14_KI270722v1_random         183862 2 +    194050 TC
s panTro4.chr14_AACZ03171041_random     29660 2 -     37130 TC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    348 2 +      1597 TC
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398694 2 +  72422247 TC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522993 2 - 229590362 TC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42203 2 +     87690 TC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206366 2 -    231459 TC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548532 2 + 130588469 TC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283212 2 + 210400635 TC
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41041 2 -     43889 TC
i micMur1.scaffold_18511            I 48 I 23
s tupBel1.scaffold_85531.1-8353           718 2 -      8353 TC
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005629 19 -   1077187 I

a score=45896.000000
s hg38.chr14_KI270722v1_random         183864 12 +    194050 AGCAAGTGAAGA
s panTro4.chr14_AACZ03171041_random     29662 12 -     37130 AGCAAGTGAAGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    350 12 +      1597 AGCAAGTGAAGT
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398696 12 +  72422247 AGCAAGTGAAGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225522995 12 - 229590362 AGCAAGTGAAGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42205 12 +     87690 AGCAAGTGAAGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206368 12 -    231459 AGCAAGTGAAGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548534 12 + 130588469 AGCAAGTGAAGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283214 12 + 210400635 AGCAAGTGAAGA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           720 12 -      8353 AGCAAGGGAAGT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41043 23 -     43889 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005629 19 -   1077187 I

a score=18075.000000
s hg38.chr14_KI270722v1_random         183876 4 +    194050 TTCT
s panTro4.chr14_AACZ03171041_random     29674 4 -     37130 TTCT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    362 4 +      1597 TTCC
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398708 4 +  72422247 TTCT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523007 4 - 229590362 TTCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42217 4 +     87690 TTCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206380 4 -    231459 TCCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548546 4 + 130588469 TTCT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283226 4 + 210400635 TTCT
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41066 4 -     43889 TTCT
i micMur1.scaffold_18511            I 23 C 0
s tupBel1.scaffold_85531.1-8353           732 4 -      8353 TTCT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e panPan1.JH650567                      20270 66 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005629 19 -   1077187 I

a score=6228.000000
s hg38.chr14_KI270722v1_random         183880 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     29678 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650567                      20336 1 -     44305 G
i panPan1.JH650567                  I 66 C 0
s gorGor3.CABD02457869                    366 1 +      1597 A
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398712 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523011 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42221 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206384 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548550 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283230 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41070 1 -     43889 G
i micMur1.scaffold_18511            C 0 I 33
s otoGar3.GL873804                    1005648 1 -   1077187 G
i otoGar3.GL873804                  I 19 C 0
s tupBel1.scaffold_85531.1-8353           736 1 -      8353 G
i tupBel1.scaffold_85531.1-8353     C 0 I 5
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I

a score=6455.000000
s hg38.chr14_KI270722v1_random         183881 2 +    194050 CT
s panTro4.chr14_AACZ03171041_random     29679 2 -     37130 CT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650567                      20337 2 -     44305 GT
i panPan1.JH650567                  C 0 C 0
s ponAbe2.chrUn                      64398713 2 +  72422247 CT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523012 2 - 229590362 CT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42222 2 +     87690 CT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206385 2 -    231459 CT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548551 2 + 130588469 CT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283231 2 + 210400635 CT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005649 2 -   1077187 GT
i otoGar3.GL873804                  C 0 I 13
s tupBel1.scaffold_85531.1-8353           742 2 -      8353 CT
i tupBel1.scaffold_85531.1-8353     I 5 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41071 33 -     43889 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e gorGor3.CABD02457869                    367 0 +      1597 C

a score=2997.000000
s hg38.chr14_KI270722v1_random         183883 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29681 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650567                      20339 1 -     44305 T
i panPan1.JH650567                  C 0 n 0
s ponAbe2.chrUn                      64398715 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523014 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42224 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206387 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548553 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283233 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           744 1 -      8353 C
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41071 33 -     43889 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005651 13 -   1077187 I
e gorGor3.CABD02457869                    367 0 +      1597 C

a score=8997.000000
s hg38.chr14_KI270722v1_random         183884 4 +    194050 GTGT
s panTro4.chr14_AACZ03171041_random     29682 4 -     37130 GTGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    367 2 +      1597 --GT
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398716 4 +  72422247 GTGT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523015 4 - 229590362 GTGT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42225 4 +     87690 GTGT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206388 4 -    231459 GTGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548554 4 + 130588469 GTGT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283234 4 + 210400635 GTGT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005664 4 -   1077187 TTAT
i otoGar3.GL873804                  I 13 I 55
s tupBel1.scaffold_85531.1-8353           745 3 -      8353 ATG-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41071 33 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I

a score=4500.000000
s hg38.chr14_KI270722v1_random         183888 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29686 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    369 1 +      1597 C
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398720 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523019 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42229 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206392 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548558 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283238 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           748 1 -      8353 C
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41071 33 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005668 55 -   1077187 I

a score=57269.000000
s hg38.chr14_KI270722v1_random         183889 27 +    194050 ACCTTC----CTACGCAT---CCCA--------TC---CCCGCTT
s panTro4.chr14_AACZ03171041_random     29687 27 -     37130 CCCTTC----CTACGCAT---CCCA--------TC---CCCGCTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    370 39 +      1597 CCCTCCAGCACTTTGTAC---CCTACTTTACACTC---CTGGCTT
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398721 27 +  72422247 CCCTTC----TTACGCAT---CCCA--------TC---CCGGCTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523020 27 - 229590362 CCCTTC----CTACGCAT---CCCA--------TC---CCCGCTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42230 27 +     87690 CCCTTC----CTACGCAT---CCCA--------TC---CCCGCTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206393 27 -    231459 CCCTTC----CTACGCAT---CCCA--------TC---CCCGCTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548559 27 + 130588469 CCCTTC----CTACGCAT---CCCA--------TC---CCCGCTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283239 25 + 210400635 ACCTTC----CTACCCGT---CCCG--------TC---CCCAC--
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41104 30 -     43889 GTCTAG----CCACCAAG---CCCG--------TCTAGCCCTCTT
i micMur1.scaffold_18511            I 33 I 45
s tupBel1.scaffold_85531.1-8353           749 30 -      8353 ACTTTA----CAGCTTGTCTACCCT--------TC---CTGGTTT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005668 55 -   1077187 I

a score=65793.000000
s hg38.chr14_KI270722v1_random         183916 19 +    194050 TAGTTTATAGGAGTTTATA
s panTro4.chr14_AACZ03171041_random     29714 19 -     37130 TAGTTTATAGGAGTTTATA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    409 19 +      1597 GAGTTTACAGAAATTTATA
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398748 19 +  72422247 TAGTTTATAGGAGTTTATA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523047 19 - 229590362 TAGTTTATAGGAGTTTATA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42257 19 +     87690 TAGTTTATAGGAGTTTATA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206420 19 -    231459 TAGTTTATAGGAGTTTATA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548586 19 + 130588469 TAGTTTATAGGAGTTTATA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283264 16 + 210400635 ---TTTATAGGAGTTTATA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           779 19 -      8353 GAGTTTGCAGAAGTTTACA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41134 45 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45216 56 +    169463 I
e otoGar3.GL873804                    1005668 55 -   1077187 I

a score=2082.000000
s hg38.chr14_KI270722v1_random         183935 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29733 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    428 1 +      1597 G
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398767 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523066 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42276 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206439 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548605 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283280 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45272 1 +    169463 C
i tarSyr2.KE946707v1                I 56 I 29
s tupBel1.scaffold_85531.1-8353           798 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41134 45 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1005668 55 -   1077187 I

a score=31631.000000
s hg38.chr14_KI270722v1_random         183936 12 +    194050 AAGATCTGGTTT--
s panTro4.chr14_AACZ03171041_random     29734 12 -     37130 AAGATCTGGTTT--
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    429 12 +      1597 GAAACCTAGCTT--
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398768 12 +  72422247 AAGATCTGGTTT--
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523067 12 - 229590362 AAGATCTGGTTT--
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42277 12 +     87690 AAGATCTGGTTT--
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206440 12 -    231459 AAAATCTGGTTT--
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548606 12 + 130588469 AAGATCTGGTTT--
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283281 12 + 210400635 AAGATCTGGTTT--
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           799 14 -      8353 AAAACCCATTGCTA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41134 45 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45273 29 +    169463 I
e otoGar3.GL873804                    1005668 55 -   1077187 I

a score=12562.000000
s hg38.chr14_KI270722v1_random         183948 3 +    194050 CTA
s panTro4.chr14_AACZ03171041_random     29746 3 -     37130 CTA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    441 3 +      1597 CCA
i gorGor3.CABD02457869              C 0 C 0
s ponAbe2.chrUn                      64398780 3 +  72422247 CTA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523079 3 - 229590362 CTA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42289 3 +     87690 CTA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206452 3 -    231459 CTA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548618 3 + 130588469 CTA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283293 3 + 210400635 CTG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45302 3 +    169463 CTA
i tarSyr2.KE946707v1                I 29 I 56
s otoGar3.GL873804                    1005723 3 -   1077187 TCA
i otoGar3.GL873804                  I 55 C 0
s tupBel1.scaffold_85531.1-8353           813 3 -      8353 CCA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41134 45 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I

a score=3360.000000
s hg38.chr14_KI270722v1_random         183951 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     29749 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s gorGor3.CABD02457869                    444 1 +      1597 T
i gorGor3.CABD02457869              C 0 N 0
s ponAbe2.chrUn                      64398783 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523082 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42292 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206455 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548621 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283296 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005726 1 -   1077187 G
i otoGar3.GL873804                  C 0 I 66
s tupBel1.scaffold_85531.1-8353           816 1 -      8353 G
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41134 45 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I

a score=8764.000000
s hg38.chr14_KI270722v1_random         183952 3 +    194050 GGA
s panTro4.chr14_AACZ03171041_random     29750 3 -     37130 GGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398784 3 +  72422247 GGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523083 3 - 229590362 GGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42293 3 +     87690 GGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206456 3 -    231459 GGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548622 3 + 130588469 GGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283297 3 + 210400635 GGA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           817 3 -      8353 TGA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41134 45 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e otoGar3.GL873804                    1005727 66 -   1077187 I

a score=19127.000000
s hg38.chr14_KI270722v1_random         183955 7 +    194050 AGTTGGG
s panTro4.chr14_AACZ03171041_random     29753 7 -     37130 AGTTGGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398787 7 +  72422247 AGTTGGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523086 7 - 229590362 AGTTGGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42296 7 +     87690 AGTTGGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206459 7 -    231459 AGTTGGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548625 7 + 130588469 AGTTGGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283300 7 + 210400635 AGATGGA
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41179 7 -     43889 CATTGAG
i micMur1.scaffold_18511            I 45 I 64
s tupBel1.scaffold_85531.1-8353           820 7 -      8353 CAATGGG
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e otoGar3.GL873804                    1005727 66 -   1077187 I

a score=1935.000000
s hg38.chr14_KI270722v1_random         183962 3 +    194050 GGT
s panTro4.chr14_AACZ03171041_random     29760 3 -     37130 GGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398794 3 +  72422247 GAT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523093 3 - 229590362 GGT
i rheMac3.chr1                      C 0 I 1
s macFas5.chr5_KE145639_random          42303 3 +     87690 GGT
i macFas5.chr5_KE145639_random      C 0 I 1
s papAnu2.JH684932                     206466 3 -    231459 GGT
i papAnu2.JH684932                  C 0 I 1
s chlSab2.chr20                     130548632 3 + 130588469 GGT
i chlSab2.chr20                     C 0 I 1
s calJac3.chr1                      174283307 2 + 210400635 GT-
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           827 1 -      8353 --T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e otoGar3.GL873804                    1005727 66 -   1077187 I

a score=476.000000
s hg38.chr14_KI270722v1_random         183965 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29763 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398797 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s calJac3.chr1                      174283309 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           828 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e otoGar3.GL873804                    1005727 66 -   1077187 I
e chlSab2.chr20                     130548635 1 + 130588469 I
e papAnu2.JH684932                     206469 1 -    231459 I
e macFas5.chr5_KE145639_random          42306 1 +     87690 I
e rheMac3.chr1                      225523096 1 - 229590362 I

a score=55130.000000
s hg38.chr14_KI270722v1_random         183966 37 +    194050 ---CTAGATGATGGTCCTGTTTT----CTTTGTAATAAAGTAGG
s panTro4.chr14_AACZ03171041_random     29764 37 -     37130 ---CCAGATGATGATCCTGTTTT----CTTTGTAATAAAGTAGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398798 37 +  72422247 ---CCAGAAGATGGTCCTGTTTT----CTTTGTAATAAAGTAGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523097 29 - 229590362 ---CCAGATGATGGTCCTGTTTT----CTTTATAAT--------
i rheMac3.chr1                      I 1 C 0
s macFas5.chr5_KE145639_random          42307 29 +     87690 ---CCAGATGATGGTCCTGTTTT----CTTTATAAT--------
i macFas5.chr5_KE145639_random      I 1 C 0
s papAnu2.JH684932                     206470 29 -    231459 ---CCAGATGATGgtcctgtttt----ctttataat--------
i papAnu2.JH684932                  I 1 C 0
s chlSab2.chr20                     130548636 29 + 130588469 ---CCAGATGATGGTCCTGTTTT----CTTTATAAT--------
i chlSab2.chr20                     I 1 C 0
s calJac3.chr1                      174283310 37 + 210400635 ---TCAGATGATGGTCCTTTTTT----CTTTGTAATAAAGTAGG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           829 41 -      8353 CTGCAGGAAGATTGAATGGTTATTGGATGTCCAAATGAAGG---
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431299 143 -    492427 I
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e otoGar3.GL873804                    1005727 66 -   1077187 I

a score=-1390.000000
s hg38.chr14_KI270722v1_random         184003 1 +    194050 -T
s panTro4.chr14_AACZ03171041_random     29801 1 -     37130 -T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398835 1 +  72422247 -T
i ponAbe2.chrUn                     C 0 C 0
s rhiRox1.KN297764v1                   431442 1 -    492427 -T
i rhiRox1.KN297764v1                I 143 C 0
s calJac3.chr1                      174283347 1 + 210400635 -T
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           870 1 -      8353 A-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e otoGar3.GL873804                    1005727 66 -   1077187 I
e chlSab2.chr20                     130548665 0 + 130588469 C
e papAnu2.JH684932                     206499 0 -    231459 C
e macFas5.chr5_KE145639_random          42336 0 +     87690 C
e rheMac3.chr1                      225523126 0 - 229590362 C

a score=-1260.000000
s hg38.chr14_KI270722v1_random         184004 1 +    194050 -G
s panTro4.chr14_AACZ03171041_random     29802 1 -     37130 -G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398836 1 +  72422247 -G
i ponAbe2.chrUn                     C 0 C 0
s rhiRox1.KN297764v1                   431443 1 -    492427 -G
i rhiRox1.KN297764v1                C 0 C 0
s calJac3.chr1                      174283348 1 + 210400635 -G
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005793 1 -   1077187 -G
i otoGar3.GL873804                  I 66 C 0
s tupBel1.scaffold_85531.1-8353           871 1 -      8353 C-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45305 56 +    169463 I
e chlSab2.chr20                     130548665 0 + 130588469 C
e papAnu2.JH684932                     206499 0 -    231459 C
e macFas5.chr5_KE145639_random          42336 0 +     87690 C
e rheMac3.chr1                      225523126 0 - 229590362 C

a score=2548.000000
s hg38.chr14_KI270722v1_random         184005 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29803 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398837 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rhiRox1.KN297764v1                   431444 1 -    492427 T
i rhiRox1.KN297764v1                C 0 I 263
s calJac3.chr1                      174283349 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45361 1 +    169463 T
i tarSyr2.KE946707v1                I 56 C 0
s otoGar3.GL873804                    1005794 1 -   1077187 T
i otoGar3.GL873804                  C 0 C 0
s tupBel1.scaffold_85531.1-8353           872 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e chlSab2.chr20                     130548665 0 + 130588469 C
e papAnu2.JH684932                     206499 0 -    231459 C
e macFas5.chr5_KE145639_random          42336 0 +     87690 C
e rheMac3.chr1                      225523126 0 - 229590362 C

a score=1911.000000
s hg38.chr14_KI270722v1_random         184006 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     29804 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398838 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s calJac3.chr1                      174283350 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45362 1 +    169463 T
i tarSyr2.KE946707v1                C 0 C 0
s otoGar3.GL873804                    1005795 1 -   1077187 T
i otoGar3.GL873804                  C 0 I 33
s tupBel1.scaffold_85531.1-8353           873 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e chlSab2.chr20                     130548665 0 + 130588469 C
e papAnu2.JH684932                     206499 0 -    231459 C
e macFas5.chr5_KE145639_random          42336 0 +     87690 C
e rheMac3.chr1                      225523126 0 - 229590362 C

a score=-2113.000000
s hg38.chr14_KI270722v1_random         184007 1 +    194050 -A
s panTro4.chr14_AACZ03171041_random     29805 1 -     37130 -A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398839 1 +  72422247 -A
i ponAbe2.chrUn                     C 0 C 0
s calJac3.chr1                      174283351 1 + 210400635 -G
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45363 1 +    169463 -G
i tarSyr2.KE946707v1                C 0 I 61
s tupBel1.scaffold_85531.1-8353           874 1 -      8353 T-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41186 64 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1005796 33 -   1077187 I
e chlSab2.chr20                     130548665 0 + 130588469 C
e papAnu2.JH684932                     206499 0 -    231459 C
e macFas5.chr5_KE145639_random          42336 0 +     87690 C
e rheMac3.chr1                      225523126 0 - 229590362 C

a score=1500.000000
s hg38.chr14_KI270722v1_random         184008 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     29806 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398840 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s calJac3.chr1                      174283352 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41250 1 -     43889 C
i micMur1.scaffold_18511            I 64 I 47
s tupBel1.scaffold_85531.1-8353           875 1 -      8353 C
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45364 61 +    169463 I
e otoGar3.GL873804                    1005796 33 -   1077187 I
e chlSab2.chr20                     130548665 0 + 130588469 C
e papAnu2.JH684932                     206499 0 -    231459 C
e macFas5.chr5_KE145639_random          42336 0 +     87690 C
e rheMac3.chr1                      225523126 0 - 229590362 C

a score=57362.000000
s hg38.chr14_KI270722v1_random         184009 25 +    194050 AAAG---TTTCGA-GGTGGGCGCCTTTTA----
s panTro4.chr14_AACZ03171041_random     29807 25 -     37130 AAAG---TTTCGA-GGAGGGCGCCTTTTA----
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398841 25 +  72422247 AAAG---TTTGGA-GGAGGGCGCCTTTTA----
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523126 25 - 229590362 AAAG---TTTGGA-GGAGGGCGCCTTTTA----
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42336 25 +     87690 AAAG---TTTGGA-GGAGGGCGCCTTTTA----
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206499 25 -    231459 aaag---tttGGA-GGAGGGCGCCTTTTA----
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548665 25 + 130588469 AAAG---TTTGGA-GGAGGGCGCCTTTTA----
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283353 25 + 210400635 AAAG---TTTGGA-GGAGGGCACCCTTTA----
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           876 32 -      8353 AAAGGACTTT-GAAAGAAGGCACCCTGTGAATA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41251 47 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45364 61 +    169463 I
e otoGar3.GL873804                    1005796 33 -   1077187 I

a score=3321.000000
s hg38.chr14_KI270722v1_random         184034 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     29832 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398866 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523151 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42361 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206524 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548690 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283378 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005829 1 -   1077187 A
i otoGar3.GL873804                  I 33 I 73
s tupBel1.scaffold_85531.1-8353           908 1 -      8353 G
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41251 47 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45364 61 +    169463 I

a score=41128.000000
s hg38.chr14_KI270722v1_random         184035 17 +    194050 GAATCCCACCAAAAAGA
s panTro4.chr14_AACZ03171041_random     29833 17 -     37130 GAATCCCACCTAAAAGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398867 17 +  72422247 GAATCCCACCTAAAAGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523152 17 - 229590362 GAATCCCACCTAAAAGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42362 17 +     87690 GAATCCCACCTAAAAGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206525 17 -    231459 GAATCCCACCTAAAAGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548691 16 + 130588469 GAAT-CCACCTAAAAGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283379 13 + 210400635 GAATCCCACTTA----A
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           909 17 -      8353 GAATCCCATCTCAAAGA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41251 47 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45364 61 +    169463 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=12690.000000
s hg38.chr14_KI270722v1_random         184052 3 +    194050 ACA
s panTro4.chr14_AACZ03171041_random     29850 3 -     37130 ACA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398884 3 +  72422247 ACA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523169 3 - 229590362 ACA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42379 3 +     87690 ACA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206542 3 -    231459 ACA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548707 3 + 130588469 ACA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283392 3 + 210400635 ACA
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41298 3 -     43889 ACA
i micMur1.scaffold_18511            I 47 I 48
s tupBel1.scaffold_85531.1-8353           926 3 -      8353 ACA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45364 61 +    169463 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=28358.000000
s hg38.chr14_KI270722v1_random         184055 11 +    194050 CCTCTTTGGAC
s panTro4.chr14_AACZ03171041_random     29853 11 -     37130 CCTCTTTGGAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398887 11 +  72422247 CCTCTTTGGAC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523172 11 - 229590362 CCTCTCTGGAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42382 11 +     87690 CCTCTCTGGAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206545 11 -    231459 CCTCTCTGGAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548710 11 + 130588469 CCTCTCTGGAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283395 11 + 210400635 CCCCTCTGGAC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           929 11 -      8353 CCCCTGTGCCT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41301 48 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45364 61 +    169463 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=-864.000000
s hg38.chr14_KI270722v1_random         184066 1 +    194050 -T
s panTro4.chr14_AACZ03171041_random     29864 1 -     37130 -T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398898 1 +  72422247 -T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523183 1 - 229590362 -T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42393 1 +     87690 -T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206556 1 -    231459 -T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548721 1 + 130588469 -T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283406 1 + 210400635 -T
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    45425 1 +    169463 -T
i tarSyr2.KE946707v1                I 61 I 726
s tupBel1.scaffold_85531.1-8353           940 1 -      8353 G-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41301 48 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=76500.000000
s hg38.chr14_KI270722v1_random         184067 31 +    194050 AACCCTCTCACTGGTACTTCAAAGCAGAGGA---
s panTro4.chr14_AACZ03171041_random     29865 31 -     37130 AACCCTCTCACTGGTACTTCAAAGCAGAGGA---
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398899 31 +  72422247 AACCCTCTCACTGGTACTTCAAAGCAGAGGA---
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523184 31 - 229590362 AACCCTCTCACTGGTGCTTCAAAGCAGGGGA---
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42394 31 +     87690 AACCGTCTCACTGGTGCTTCAAAGCAGGGGA---
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206557 31 -    231459 AACCCTCTCACTGGTGCTTCAAAGCAGGGGA---
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548722 31 + 130588469 AACCCTCTCACTAGTGCTTCAAAGCAGGGGA---
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283407 30 + 210400635 CTCTCTCTCACTGGTTCCTCAAAGCAGA-GA---
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           941 34 -      8353 AGCTCGCTCACTAGTGCTTCAGAGTAGAGGCAGA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41301 48 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=4346.000000
s hg38.chr14_KI270722v1_random         184098 3 +    194050 GGT
s panTro4.chr14_AACZ03171041_random     29896 3 -     37130 GGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398930 3 +  72422247 AGT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523215 3 - 229590362 AGT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42425 3 +     87690 AGT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206588 3 -    231459 AGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548753 3 + 130588469 AGT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283437 3 + 210400635 AGT
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41349 2 -     43889 AG-
i micMur1.scaffold_18511            I 48 I 86
s tupBel1.scaffold_85531.1-8353           975 3 -      8353 AGA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=6876.000000
s hg38.chr14_KI270722v1_random         184101 2 +    194050 GT
s panTro4.chr14_AACZ03171041_random     29899 2 -     37130 GT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398933 2 +  72422247 GT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523218 2 - 229590362 GT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42428 2 +     87690 GT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206591 2 -    231459 GT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548756 2 + 130588469 GT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283440 2 + 210400635 GT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           978 2 -      8353 GT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41351 86 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1005830 73 -   1077187 I

a score=7965.000000
s hg38.chr14_KI270722v1_random         184103 3 +    194050 CAC
s panTro4.chr14_AACZ03171041_random     29901 3 -     37130 CAC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398935 3 +  72422247 CAC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523220 3 - 229590362 CAC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42430 3 +     87690 CAC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206593 3 -    231459 CAC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548758 3 + 130588469 CAC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283442 3 + 210400635 TAC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1005903 3 -   1077187 CAG
i otoGar3.GL873804                  I 73 I 116
s tupBel1.scaffold_85531.1-8353           980 3 -      8353 CTC
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41351 86 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I

a score=242108.000000
s hg38.chr14_KI270722v1_random         184106 93 +    194050 ----AGGTGAAGATTCCA-GTTTGTATGACCCAAGCAGTTAT-TTTCCCACTCCCCAGAATGGCCCAGATTTGGTTGATAAGACCTTATCCAATAGCTC
s panTro4.chr14_AACZ03171041_random     29904 93 -     37130 ----AGGTGAAGATTCCA-GTTTGTATGACCCAAGCAGTTAT-TTTCCCACTCCCCAGAATGGCCCAGATTTGGTTGATAAGACCTTATCCAATAGCTC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64398938 93 +  72422247 ----AGGTGAAGATTCCA-GTTTGTATGACCTAAGCAGTTAT-TTTCCCACTCCCCGGAATGGCCCAGATTTGGTTGATAAGACCTTATCCAATAGCTC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523223 93 - 229590362 ----AGGCGAAGATTCCA-GTTTGTATGACCCAAGCAGTTAT-TTTCCCACTCCCCGGAGTGGTCCAGATTTGGTTGATAATACCTTATCCAGTAGCTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42433 93 +     87690 ----AGGCGAAGATTCCA-GTTTGTATGACCCAAGCAGTTAT-TTTCCCACTCCCCGGAGTGGTCCAGATTTGGTTGATAATACCTTATCCAGTAGCTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206596 93 -    231459 ----AGGCGAAGATTCCA-GTTTGTATGACCCAAGCAGTTAT-TTTCCCACTCCCCAGAGTGGTCCAGATTTGGTTGATAATACCTTATCCAGTAGCTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548761 93 + 130588469 ----AGGCGAAGATTCCA-GTTTGTATGACCCAAGCAATTAT-TTTCCCACTCCCCAGAGTGGTCCAGATTTGGTTGATAATACCTTATCCAGTAGCTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283445 93 + 210400635 ----AGGTGAAGAGCCCA-GCTTGTATGACCCGAGCAATTAT-TTTCCCACTCCTCAGAGCGCTCAAGGTTTGGTTGATAATACCTTATCCAGTAGCTC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353           983 99 -      8353 AGAAAGGGGAAGATTCTACCTTTGTATGACCCAAGGAATGATGGATTCTGCTGCCTAGAGTGAGCAAGATTTGGAGAATACTGTCTCTTTCTGAAGTTG
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41351 86 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1005906 116 -   1077187 I

a score=28620.000000
s hg38.chr14_KI270722v1_random         184199 9 +    194050 TCAAACACT
s panTro4.chr14_AACZ03171041_random     29997 9 -     37130 TCAAACACT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399031 9 +  72422247 TCAAACACT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523316 9 - 229590362 TCAAATGCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42526 9 +     87690 TCAAATGCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206689 9 -    231459 TCAAATACT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548854 9 + 130588469 TCAAATACT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283538 9 + 210400635 TCAAAGACT
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41437 9 -     43889 TCAAAGACT
i micMur1.scaffold_18511            I 86 I 210
s tupBel1.scaffold_85531.1-8353          1082 9 -      8353 TCAACCACT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1005906 116 -   1077187 I

a score=26478.000000
s hg38.chr14_KI270722v1_random         184208 9 +    194050 GGGTGGTAG
s panTro4.chr14_AACZ03171041_random     30006 9 -     37130 GGGTGGTAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399040 9 +  72422247 GGGTGGTAG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523325 9 - 229590362 GGGTGGTAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42535 9 +     87690 GGGTGGTAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206698 9 -    231459 GGGTGGTAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548863 9 + 130588469 GGCTGGTAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283547 9 + 210400635 GGGTGGTAG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1091 9 -      8353 GGCTGCTAG
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41446 210 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1005906 116 -   1077187 I

a score=1722.000000
s hg38.chr14_KI270722v1_random         184217 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     30015 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399049 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523334 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42544 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206707 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548872 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283556 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006022 1 -   1077187 T
i otoGar3.GL873804                  I 116 I 123
s tupBel1.scaffold_85531.1-8353          1100 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41446 210 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I

a score=127102.000000
s hg38.chr14_KI270722v1_random         184218 51 +    194050 GGAAGGTTTAGACCAACATTCAGAAGGAAGAGGGGAGTTTGGCTGTGAATG
s panTro4.chr14_AACZ03171041_random     30016 51 -     37130 GGAAGGTTTGGACCAACATTCAGAAGGAAGAGGGGAGTTTGGCTGCGAATG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399050 51 +  72422247 GGAAGGTTTGGACCAACATTCAGAAGGAAGAGAGGAGTTTGGCTGCGAATG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523335 51 - 229590362 GGAAGGTTTGGACCAACATTGAGAAGGAAGAGGGGAGTTTGGCTGCGGGTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42545 51 +     87690 GGAAGGTTTGGACCAACATTGAGAAGGAAGAGGGGAGTTTGGCTGCGGGTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206708 51 -    231459 GGAAGGTTTGAACCAACATTCAGAAGGAAGAGGGGAGTTTGGCTGCGGGTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548873 51 + 130588469 GGAAAGTTTGGACCAACATTCAGAAGGAAGAGGGGAGTTTGGCTGCGGGTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283557 51 + 210400635 AGAAGGTTTGGACCAACTTTCAGATGGAAGAGGCGAATTTGGCTGAGAATG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1101 45 -      8353 CAGAGATGTGGACCAGCTTTCAGAAGGAAG---TGAGTTGGGCAGAGG---
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431445 263 -    492427 I
e micMur1.scaffold_18511                41446 210 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006023 123 -   1077187 I

a score=5005.000000
s hg38.chr14_KI270722v1_random         184269 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     30067 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399101 1 +  72422247 A
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523386 1 - 229590362 A
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42596 1 +     87690 A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206759 1 -    231459 A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548924 1 + 130588469 A
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   431708 1 -    492427 A
i rhiRox1.KN297764v1                I 263 I 173
s calJac3.chr1                      174283608 1 + 210400635 A
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                41656 1 -     43889 A
i micMur1.scaffold_18511            I 210 I 590
s tupBel1.scaffold_85531.1-8353          1146 1 -      8353 A
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006023 123 -   1077187 I

a score=212817.000000
s hg38.chr14_KI270722v1_random         184270 82 +    194050 CAGGCAAGGGCCAAAGAGATGTTACTTGTTGGAGGGGACTTAATAGTTTGGTCTTCGGTGGAAAAATATCCTGTTATACTTG
s panTro4.chr14_AACZ03171041_random     30068 82 -     37130 CAGGCAAGGGCCAAAGAGATGTTACTTGTTGGAGGGGACTTAATAGTGTGGTCTTCGGTGGAAAAATATCCTGTTATACTTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399102 82 +  72422247 CAGGCAGGGGCCAAAGAGATGTTACTTATTGGAGAGGACTTAATAGTGTGGTCTTCGGTGGAAAAATATCCTGTTATACCTG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523387 82 - 229590362 CAGGCAAGGGCCAAAGAGATGTTACTTACTGGAGGGGACTTAATAGTGTTGTCCTGAGTGGAAAAATAACCTGTTATACCTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42597 82 +     87690 CAGGCAAGGGCCAAAGAGATGTTACTTACTGGAGGGGACTTAATAGTGTTGTCCTGAGTGGAAAAATAACCTGTTATACCTG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206760 82 -    231459 CAGGCAAGGGCCAAAGAGATGTTACTTACTGGAGGGGACTTAATAGTGTTGTCCTGGGTGGAAAAATAACCTGTTATACCTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130548925 82 + 130588469 CAGGCAAGGGCCAAAGAGATGTTACTTACTGGAGGGAACTTAATAGTGTTGTCCTGGGTGGAAAAATAACCTGTTATACCTG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283609 80 + 210400635 CAGGCAAGGGCCAAGGAGATGTTACTTATTGGAGGAGACTTAACGGTG--GTCTTAGGTGGGAAAATAACCTGTTATACCTG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1147 81 -      8353 TAGGCAAGAGCCTAAGCAGTGTTACTTACTGGGGGAGTCTTGAAGGTGTAGTCTAGGGTGAAGGGATATCCTGTCACAGCG-
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431709 173 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006023 123 -   1077187 I

a score=4095.000000
s hg38.chr14_KI270722v1_random         184352 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     30150 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399184 1 +  72422247 A
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523469 1 - 229590362 A
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42679 1 +     87690 A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206842 1 -    231459 A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549007 1 + 130588469 A
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283689 1 + 210400635 A
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006146 1 -   1077187 A
i otoGar3.GL873804                  I 123 I 316
s tupBel1.scaffold_85531.1-8353          1228 1 -      8353 A
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431709 173 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I

a score=226947.000000
s hg38.chr14_KI270722v1_random         184353 90 +    194050 GAGGATCTGTCTGGAGTACTCTGTAAAGACACTTTCATTCCTTCAACCTT----TTCTCACTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGT
s panTro4.chr14_AACZ03171041_random     30151 90 -     37130 GAGGATCTGTCTGGAGTACTCTGTAAAGACACTTTCATTCCTTCAATCGT----TTCTCACTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399185 90 +  72422247 GAGGATCTGTCTGGAGTACTCTGTAGAGACACTTTCATTCCTTCAATCTT----TTCTCATTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523470 90 - 229590362 GAGGATTTGTGTGGAGTACTCTGTAAACACACTTTAATTCGTTCAATCTT----TTCTCATTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42680 90 +     87690 GAGGATTTGTGTGGAGTACTCTGTAAACACACTTTAATTCGTTCAATCTT----TTCTCATTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206843 90 -    231459 GAGGATTTGTCTGGAGTGCTCTGTAAACACACTTTAATTCGTTCAATCTT----TTCTCATTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549008 90 + 130588469 GAGGATTTGTCTGCAGTACTCTGTAAACACACTTTAATTCGTTCAATCTT----TTCTCATTGTTTCCAGTGGCTGAACTTTCTTAAAAGTAGT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283690 90 + 210400635 GAGGATCTGTTAAGAGTACTCTGTAAAGACTCTTTCATTCCTTCAGTCTT----TTCTCATTGTTTCCAGTGTCTGAGCTTTCTTCAAAGTAGT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1229 91 -      8353 CAAGATCTGTCTTCACTG-TCTCTACACACACTCCCAGTCCTTCAGTCTCCCTATACTGATTATTTCCAGT--CTGAGCTTTCTCAAATCTAGT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431709 173 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=4500.000000
s hg38.chr14_KI270722v1_random         184443 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     30241 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399275 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523560 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42770 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206933 1 -    231459 c
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549098 1 + 130588469 C
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   431882 1 -    492427 C
i rhiRox1.KN297764v1                I 173 I 947
s calJac3.chr1                      174283780 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1320 1 -      8353 C
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=5576.000000
s hg38.chr14_KI270722v1_random         184444 2 +    194050 Ta
s panTro4.chr14_AACZ03171041_random     30242 2 -     37130 Ta
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399276 2 +  72422247 Ta
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523561 2 - 229590362 Ta
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42771 2 +     87690 Ta
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206934 2 -    231459 ta
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549099 2 + 130588469 Ta
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283781 2 + 210400635 TG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1321 2 -      8353 TA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=5600.000000
s hg38.chr14_KI270722v1_random         184446 2 +    194050 gg
s panTro4.chr14_AACZ03171041_random     30244 2 -     37130 gg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399278 2 +  72422247 gg
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523563 2 - 229590362 gg
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42773 2 +     87690 gg
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206936 2 -    231459 gg
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549101 2 + 130588469 gg
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174283783 2 + 210400635 Gg
i calJac3.chr1                      C 0 M 1415
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e tupBel1.scaffold_85531.1-8353          1323 0 -      8353 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=271378.000000
s hg38.chr14_KI270722v1_random         184448 154 +    194050 ccaaggcaggaggatcacctgaggtcagcagttcgacaccagcctggccaacatatagtgaaaccttgtctctactaaaaaatacaaaaattacct-gagtgtggtggtgcacacctgtatagtcccagctacttgggaaactcaagcaagaaaa
s panTro4.chr14_AACZ03171041_random     30246 154 -     37130 ccaaggcaggaggatcacctgaggtcaggagttcaacaccagcctggccaacatatactgaaaccttgtctctactaaaaaatacaaaaattagct-gagtgtggtggtgcacacctgtatagtcccagctacttgggaaactcaagcaagaaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399280 154 +  72422247 ccaaggcaggaggatcacctgaggtcaggagttctacaccagcctggccaacatatagtgaaaccttgtctctactaaaaaatacaaaaattagct-gggcgtggtggtgcacacctgtatagtcccagctacttgggaaactgaagcaagagaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523565 154 - 229590362 tcaaggcgggaggatcacctgaagtcaggagttcgacaccagcctggccaacattttgtgaaaccgtgtctcttctaaaaaatacgaaaattagct-gggcgtggcggcgcacacctgtatagtcccagctacttgggaaactgaggcaagagaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          42775 154 +     87690 tcaaggcgggaggatcacctgaagtcaggagttcgacaccagcctggccaacattttgtgaaaccgtgtctcttctaaaaaatacgaaaattagct-gggcgtggtggcgcacacctgtatagtcccagctacttgggaaactgaggcaagagaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     206938 155 -    231459 tcaaggcgggaggatcacctgaagtcaggagttcgacaccagcctggccaacattttgtgaaaccttgtctcttctaaaaaatacgaaaattagctggggcgtggtggcgcacacctgtatagtcccagctacttgggaaactgaggcaagagaa
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549103 154 + 130588469 tcaaggcgggaggatcacctgaagtcaggagttcgacaccagcctggccaacattttgtgaaaccttgtctctactaaaaaatgcgaaaattagct-gggcatggtggcgcacacctgtatagtcccagctacgtgggaaactgaggcaagagaa
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e calJac3.chr1                      174283785 1415 + 210400635 M
e micMur1.scaffold_18511                41657 590 -     43889 I
e tupBel1.scaffold_85531.1-8353          1323   0 -      8353 C
e panPan1.JH650567                      20340   0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=212880.000000
s hg38.chr14_KI270722v1_random         184602 103 +    194050 tcacttgtactggggaggcggaggttgcagtgagccgaga-ttgtgccaccctacactagcctgggcaacagagt--gagactctgtctctc-aaaaaaaaaaaaaa
s panTro4.chr14_AACZ03171041_random     30400 103 -     37130 tcacttgtactggggaggtggaggttgcagtgagccgaga-ttgtgccaccctactctagcctgggcaacagagc--gagactctgtctctc-aaaaaaaaaaaaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399434 103 +  72422247 tgacttgtactggggaggcggaggttgtagtgagccgaga-ttgtgccaccctactctagcctgggcaacagaga--gagactctgtttctc-aaaaaaaaaaaaaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523719 103 - 229590362 tcacttgaacccgggaggtggaggttccaatgagctgagg-ttgtgccaccctgctctagcgtgggcaacagagc--gagagtctgtctctc-aaaaaaaaaaaaaa
i rheMac3.chr1                      C 0 I 3
s macFas5.chr5_KE145639_random          42929 103 +     87690 tcacttgaacccgggaggtggaggttccaatgagctgagg-ttgtgccaccctgctctagcgtgggcaacagagc--gagagtctgtctctc-aaaaaaaaaaaaaa
i macFas5.chr5_KE145639_random      C 0 I 3
s papAnu2.JH684932                     207093 103 -    231459 tcacttgaa-ccgggaggtggaggttccagtgagctgagg-ttgtgccaccctgctctagcgtgggcaacagagc--gagactctgtctctcaaaaaaaaaaaaaaa
i papAnu2.JH684932                  C 0 I 3
s chlSab2.chr20                     130549257 103 + 130588469 tcacttgaacccgggaggtggaggttccagtgagctgaag-ttgtgccaccctgctctagcgtgggcaacagagc--gagactctgtctctc-aaaaaaaaaaaaaa
i chlSab2.chr20                     C 0 I 12
s calJac3.chr1                      174285245 106 + 210400635 tcgcttgcacccaggaagtggaggttgcagtgagccgaggattgtgccagtttactccagcctgggcaacagagtgagagactttgagtctt-taaaaaaaaaaaaa
i calJac3.chr1                      M 1415 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e tupBel1.scaffold_85531.1-8353          1323   0 -      8353 C
e panPan1.JH650567                      20340   0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=3925.000000
s hg38.chr14_KI270722v1_random         184705 25 +    194050 G--TTCTGTCACGAAATTTAGCGTCCA
s panTro4.chr14_AACZ03171041_random     30503 27 -     37130 aaTTCCTGTCACGAAATTTAGCGTCCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399537 13 +  72422247 a-----------aaaa---aaaGGCCT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523825 23 - 229590362 --aGTCTGTCACGAAATTTAGTGTC--
i rheMac3.chr1                      I 3 C 0
s macFas5.chr5_KE145639_random          43035 23 +     87690 --aGTCTGTCACGAAATTTAGCGTC--
i macFas5.chr5_KE145639_random      I 3 C 0
s papAnu2.JH684932                     207199 23 -    231459 --agtctgtcacGAAATTTAGCGTC--
i papAnu2.JH684932                  I 3 C 0
s calJac3.chr1                      174285351 10 + 210400635 --GGCCTATCAC---------------
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e tupBel1.scaffold_85531.1-8353          1323  0 -      8353 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I
e chlSab2.chr20                     130549360 12 + 130588469 I

a score=207.000000
s hg38.chr14_KI270722v1_random         184730 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     30530 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399550 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s chlSab2.chr20                     130549372 1 + 130588469 A
i chlSab2.chr20                     I 12 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e calJac3.chr1                      174285361 0 + 210400635 C
e micMur1.scaffold_18511                41657 590 -     43889 I
e tupBel1.scaffold_85531.1-8353          1323 0 -      8353 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I
e papAnu2.JH684932                     207222 0 -    231459 C
e macFas5.chr5_KE145639_random          43058 0 +     87690 C
e rheMac3.chr1                      225523848 0 - 229590362 C

a score=138200.000000
s hg38.chr14_KI270722v1_random         184731 71 +    194050 TCACTAAATTTAGCATTCAGTGATATGCTGAAGCTCCCTCTAACCTGGTAGCTTTTCCTGGTAGTTCAGTA
s panTro4.chr14_AACZ03171041_random     30531 71 -     37130 TCACTAAATTTAGCATCCAGTGATATGCTGAAGCTCCCTCTATCCTGGTAGCTTTTCCTGGTAGTTCAGTA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399551 71 +  72422247 TCACGAAATTCAGCTTCCAGTGATATGCCGAAGCTCCCTCTGTCCTGGTAGCTCTTCCTGGTAGTTCAGTA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523848 54 - 229590362 -----------------CAGTGATATGCCGAAGCTCCCGCTATCCTGGTAGCTCTTCCTGGCAGTTCGGTA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43058 54 +     87690 -----------------CAGTGATATGCCGAAGCTCCCGCTATCCTGGTAGCTCTTCCTGGCAGTTCGGTA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207222 54 -    231459 -----------------CAGTGATATGCCGAAGCTCCCGCTATCCTGGTAGCTCTTCCTGGCAGTTCGGTA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549373 71 + 130588469 TCACAAAATTTAGCGTCCAGTGATATGCCGAAGCTCCCGCTATCCTGGTAGCTCTTCCTGGCAGTTCGGTA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285361 60 + 210400635 ----CAAATTTAGCATCTAGTGATACGCTGAAGCTCCCTCTTTCCTCG-------TCCTGGTAGTTCAGTA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1323 67 -      8353 TCATCGAATTTGGCATCTGGAGATAGGCTTATGCT----CTATCTTGATAGTTCTTCCTGATAGTTCAGGA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=10505.000000
s hg38.chr14_KI270722v1_random         184802 2 +    194050 AG
s panTro4.chr14_AACZ03171041_random     30602 2 -     37130 AG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399622 2 +  72422247 AG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523902 2 - 229590362 AG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43112 2 +     87690 AG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207276 2 -    231459 AG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549444 2 + 130588469 AG
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr9                        3122065 2 - 124503471 AG
i nasLar1.chr9                      N 0 I 174
s calJac3.chr1                      174285421 2 + 210400635 AG
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378110                    2994993 2 +  49021937 AG
i saiBol1.JH378110                  N 0 I 177
s tupBel1.scaffold_85531.1-8353          1390 2 -      8353 AG
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=145452.000000
s hg38.chr14_KI270722v1_random         184804 61 +    194050 GGTTAGCCAAACTATTTCTACCTTGTGAGAATGATGGAAAAAATTTGGCTTTGAGGAGCTG--
s panTro4.chr14_AACZ03171041_random     30604 61 -     37130 GGTTAGCCAAACTATTTCTACCTTATGAGAATGATGGAAAAAATTTGGCTTTGAGGAGCTG--
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399624 61 +  72422247 GGTTAGCCAAACTATTTCTACCTTATGAGAAACatgaaaaaaatctggctttgaggagctg--
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523904 61 - 229590362 GCTTTGCCAAACCATTTCCACCTTATGAGAAAGATGAAAAAAATTTGGCTTTGAGGAGCTG--
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43114 61 +     87690 GCTTTGCCAAACCATTTCCACCTTATGAGAAAGATGAAAAAAATTTGGCTTTGAGGAGCTG--
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207278 61 -    231459 GCTTTGCCAAACCATTTCCACCTtatgagaaagatgaaaaaaatttgGCTTTGAGGAGCTG--
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549446 61 + 130588469 GTTTTGCCAAACTATTTCCACCTTATGAGAAAGATGAAAAAAATTTGGCTTTGAGGAGCTG--
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285423 61 + 210400635 TGTTTGCCAAAGGATTTTTACCTTATGAGAAAGATGAAAAAAATTTGGCTTTGAGGAGCTG--
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1392 61 -      8353 -GGTTGTGAAGGTATTTCTGTCTTGTAAAAAAaaatgaaaaaat-tggatttaaggttataag
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122067 174 - 124503471 I
e micMur1.scaffold_18511                41657 590 -     43889 I
e saiBol1.JH378110                    2994995 177 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=8595.000000
s hg38.chr14_KI270722v1_random         184865 2 +    194050 TG
s panTro4.chr14_AACZ03171041_random     30665 2 -     37130 TG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399685 2 +  72422247 tg
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523965 2 - 229590362 TG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43175 2 +     87690 TG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207339 2 -    231459 TG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549507 2 + 130588469 TG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285484 2 + 210400635 TG
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                42247 2 -     43889 TG
i micMur1.scaffold_18511            I 590 I 302
s tupBel1.scaffold_85531.1-8353          1453 2 -      8353 tg
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122067 174 - 124503471 I
e saiBol1.JH378110                    2994995 177 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=205690.000000
s hg38.chr14_KI270722v1_random         184867 81 +    194050 ACTTG-CCAGGGTCACATGATATACAGATGTTATGCATCCTGACTTTTTGGCTAGTGTTATTCATTTTGCCCCAATTAAGTC
s panTro4.chr14_AACZ03171041_random     30667 81 -     37130 ACTTG-CCAGGGTCACATGATATACAGATGTTATGCATCCTGACTTTTTGGCTAGTGTTACTCATTTTGCTCCAATTAAGTC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399687 81 +  72422247 acttg-ccagggtcacatgatatacagatgTTATGCATCCTGACTTTTTGGCTAGTGTTACTCATTTTGCCCCAATTAAGTC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225523967 81 - 229590362 ACTTG-CTGGGGCCACATGATATGCAGATGTTATGCTTCCTGACTTTTTGGCTAGTGTTATTCATTTTGCTCCAATTAAGTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43177 81 +     87690 ACTTG-CTGGGGCCACATGATATGCAGATGTTATGCTTCCTGACTTTTTGGCTAGTGTTATTCATTTTGCTCCAATTAAGTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207341 81 -    231459 ACTTG-CCGGGGCCACATGATGTGCAGATGTTATGCTTCCTGACTTTTTGGCTAGTGTTATTCATTTTGCTCCAATTAAGTC
i papAnu2.JH684932                  C 0 M 50
s chlSab2.chr20                     130549509 81 + 130588469 ACTTG-CCGGGGTCACATGATATGCAGATGTTATGCTTCCTGACTTTTTGGCTAGTGTTATTCATTTTGCCCCAATTAAGTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285486 81 + 210400635 ACATA-CCAGGGTCACATGATATATAGATGCTATGCATCCTGACTTTTTGGCTGGTGTTATTCATTTTGCCTCAATTAAGTG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1455 61 -      8353 acttacccagggtcacaTGATACCTAG-------GCATCTTGAC-TTTTGGCTTGTGTCATCGATTTTG-------------
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122067 174 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2994995 177 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I

a score=7978.000000
s hg38.chr14_KI270722v1_random         184948 18 +    194050 AAAAC--T---------TTTTTTTTTTTT
s panTro4.chr14_AACZ03171041_random     30748 20 -     37130 AAAACTTT---------TTTTTTTTTTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399768 22 +  72422247 AAAAGTTTTG-------TTTTTTTTTTTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524048 29 - 229590362 AAAAGttttttttttcttttttttttttt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43258 28 +     87690 AAAAGttttttttttc-tttttttttttt
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549590 27 + 130588469 AGAAGtttttttttt--tctttttttttt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285567 17 + 210400635 AAAAC------------TGTTTCCTTTTG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1516 11 -      8353 ----------------AGATTGTGTTT--
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122067 174 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2994995 177 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006147 316 -   1077187 I
e papAnu2.JH684932                     207422 50 -    231459 M

a score=18649.000000
s hg38.chr14_KI270722v1_random         184966 9 +    194050 AGATTTTTG
s panTro4.chr14_AACZ03171041_random     30768 9 -     37130 AGATTTTTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399790 9 +  72422247 AGATTTTTG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524077 9 - 229590362 AGATTTTTG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43286 9 +     87690 agatttttg
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549617 9 + 130588469 agatttttg
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285584 9 + 210400635 AAATTTTTG
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006463 9 -   1077187 GAGTTATTG
i otoGar3.GL873804                  I 316 I 140
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122067 174 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1527 0 -      8353 C
e saiBol1.JH378110                    2994995 177 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e papAnu2.JH684932                     207422 50 -    231459 M

a score=22559.000000
s hg38.chr14_KI270722v1_random         184975 10 +    194050 TTGACACTGA
s panTro4.chr14_AACZ03171041_random     30777 10 -     37130 TTGACACTGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399799 10 +  72422247 CTGACACTGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524086 10 - 229590362 TTGACACTGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43295 10 +     87690 ttGACACTGA
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549626 10 + 130588469 ttGACACTGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285593 10 + 210400635 TTGACACTGA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1527 10 -      8353 ATGACACCGG
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122067 174 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2994995 177 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006472 140 -   1077187 I
e papAnu2.JH684932                     207422 50 -    231459 M

a score=8001.000000
s hg38.chr14_KI270722v1_random         184985 3 +    194050 AGT
s panTro4.chr14_AACZ03171041_random     30787 3 -     37130 AGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399809 3 +  72422247 AGT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524096 3 - 229590362 AGT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43305 3 +     87690 AGT
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549636 3 + 130588469 AGT
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr9                        3122241 3 - 124503471 AGT
i nasLar1.chr9                      I 174 I 195
s calJac3.chr1                      174285603 2 + 210400635 AG-
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378110                    2995172 3 +  49021937 AGT
i saiBol1.JH378110                  I 177 I 151
s tupBel1.scaffold_85531.1-8353          1537 3 -      8353 AGT
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006472 140 -   1077187 I
e papAnu2.JH684932                     207422 50 -    231459 M

a score=51922.000000
s hg38.chr14_KI270722v1_random         184988 23 +    194050 CAACTAAGAACAAATATTGCTTT
s panTro4.chr14_AACZ03171041_random     30790 23 -     37130 CAACTAAGAACAAATATTGCTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399812 23 +  72422247 CAACTAAGAACAAACATTGCTTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524099 23 - 229590362 CAACTAAGAACAAACATTGCTTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43308 23 +     87690 CAACTAAGAACAAACATTGCTTT
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549639 23 + 130588469 CAACTAAGAACAAACATTGCTTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285605 20 + 210400635 ---CTAAGAACAAACATTGCTTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          1540 23 -      8353 CAACTTAGCACAAATATTGTTTT
i tupBel1.scaffold_85531.1-8353     C 0 I 3193
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006472 140 -   1077187 I
e papAnu2.JH684932                     207422 50 -    231459 M

a score=28146.000000
s hg38.chr14_KI270722v1_random         185011 15 +    194050 AAAGTACTTTCTCAG
s panTro4.chr14_AACZ03171041_random     30813 15 -     37130 AAAGTACTTTCTCAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399835 15 +  72422247 AAAGTACTTCCTCAG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524122 15 - 229590362 AAAGTACTTTCTCAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43331 15 +     87690 AAAGTACTTTCTCAG
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549662 15 + 130588469 AAAGTACTTTCTCAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285625 15 + 210400635 AAAGTACTTTCCCAG
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    45426 726 +    169463 I
e otoGar3.GL873804                    1006472 140 -   1077187 I
e papAnu2.JH684932                     207422 50 -    231459 M

a score=309237.000000
s hg38.chr14_KI270722v1_random         185026 184 +    194050 CCCCTCCCTGCCTGCCCACCCCTCACGCTGGAAAAAATAATAATAAAGTACTTTCCCTTgccgggcgtagtatctcacagctataatcatagcactttgggaggccaagacaggaggatcgcttgtgcccaggagtttgagactggccttggccacatagggagacccaatgtgcttacaaaaa
s panTro4.chr14_AACZ03171041_random     30828 184 -     37130 CCCCTCCCTGCCTGCCCACCCCTCCTGCTGGAAAAAATAATAATAAAGTACTTTCCCTTgccgggcgtagtatctcacagctataatcatagcactttgggaggtcaagacaggaggatcgcttgtgcccaggagtttgagactggccttggccacatagggagaccctatgtgtttacaaaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64399850 183 +  72422247 CCCCTCCCTGCCTGCTCACCCCTCCCACTGGAAAAAATAATAATAAAGTACATTCCCTTgccgggtgtagtatctcacagctataatcatagcactttgggaggcc-agacaggaggatcgcttgcgcccaggagtttgagactggccttggccacatagggagaccctatgtgttcacaaaaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524137 184 - 229590362 CCCCTCCGTGCCTGCCCACCCCTCCCACTGGAAAAAATAATAATAAAGTACTTTCCCTTgccgggcatagtgtctcacagctgtaatcataacactttgggaggccaagacaggaggatcgcttgtgcacaggagtttgagactagccttggccatatagggagaccctatgtgtttacaagaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43346 184 +     87690 CCCCTCCGTGCCTGCCCACTCCTCCCACTGGAAAAAATAATAATAAAGTACTTTCCCTTgccgggcatagtgtctcacagctgtaatcataacactttgggaggccaagacaggaggatcgcttgtgcacaggagtttgagactagccttggccatatagggagaccctatgtgtttacaagaa
i macFas5.chr5_KE145639_random      C 0 C 0
s chlSab2.chr20                     130549677 184 + 130588469 CCCCTCCGTGCCTGCCCACCCCTCCCACGGGAAAAAATAATAATAAAGTACTTTCCCTTgccgggcatagtgtctcacagctgtaatcatagcactttgggaggccaagacaggaggatcgcttgtgcgcaggagtttgagactagccttggccacatagggataccctatgtgtttacaagaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285640 147 + 210400635 CCCCTCCCCGCCTGCCCACCCCTCCCTCCACAAAAAA----ATTAAAGTACCTTCCCTTGCCA---------------------------------ttgggaggccaaggcaggaggattgcttgagcccagaagtttgagaatagcccgggccatacagggagaccctatgtgttaattaaaa
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   126084 127 -    169463 CCCCTAAATG--TGCCTATCCCT----------------------------------Gggcctggtgcggtgactcacaacagtaatcccagcactttgggaggccaaagtgggagcattgcttg-------------------agcccgggcaacatagagagacct--tgtcttcacaaaaa
i tarSyr2.KE946707v1                I 904 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340   0 -     44305 I
e otoGar3.GL873804                    1006472 140 -   1077187 I
e papAnu2.JH684932                     207422  50 -    231459 M

a score=18815.000000
s hg38.chr14_KI270722v1_random         185210 9 +    194050 aaaaaaaaa
s panTro4.chr14_AACZ03171041_random     31012 9 -     37130 aaaaaaaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400033 9 +  72422247 aaaaaaaaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524321 7 - 229590362 --gaaaaaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43530 7 +     87690 --gaaaaaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207472 9 -    231459 aagaaaaaa
i papAnu2.JH684932                  M 50 C 0
s chlSab2.chr20                     130549861 7 + 130588469 --aaaaaaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285787 7 + 210400635 --aaaaaaa
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   126211 9 -    169463 ataaaaaTA
i tarSyr2.KE946707v1                C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1006472 140 -   1077187 I

a score=103950.000000
s hg38.chr14_KI270722v1_random         185219 67 +    194050 at-------ttt-agctggttgtggtggcatccatttgtggccccaactacttggggggctgaggtgggaagatc
s panTro4.chr14_AACZ03171041_random     31021 66 -     37130 a--------aat-agctggttgtggtggcatccacttgtggccccaactacttggggggctgaggtgggaagatc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400042 67 +  72422247 at-------ttt-agctggttgtggtggcatccacttgtggccccaactacttggggggctgaggtgggaagatc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524328 66 - 229590362 a--------att-agctggttgtggtggcatgcacttgtggccccaactacttggggggctgaggtgggaagatc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43537 39 +     87690 a--------att-agctggttgtgg---------------------------tggggggctgaggtgggaagatc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207481 67 -    231459 a--------attaagctggttgtggtggcatgcacttgtggcCCCAactgcttggggggctgaggtgggaagatc
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549868 66 + 130588469 a--------att-agctggttgtggtggcgtgcacttgtggccccaactacttggggggctgaggtgggaagatc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285794 50 + 210400635 atttaaacattt-agctggttgtggtggtatgcacttgtggccccaattg------------------------c
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   126220  0 -    169463 C
e otoGar3.GL873804                    1006472 140 -   1077187 I

a score=5164.000000
s hg38.chr14_KI270722v1_random         185286 2 +    194050 ac
s panTro4.chr14_AACZ03171041_random     31087 2 -     37130 ac
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400109 2 +  72422247 ac
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524394 2 - 229590362 ac
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43576 2 +     87690 ac
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207548 2 -    231459 ac
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549934 2 + 130588469 ac
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285844 2 + 210400635 ac
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006612 2 -   1077187 tc
i otoGar3.GL873804                  I 140 I 34
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                   126220 0 -    169463 C

a score=120312.000000
s hg38.chr14_KI270722v1_random         185288 53 +    194050 ttgagcccaggagggtgaagttacagtgagctgtggttgtgccactgcactcc
s panTro4.chr14_AACZ03171041_random     31089 53 -     37130 ttgagcccaggagggcgaagttacagtgagctgtggttgtgccactgcactcc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400111 53 +  72422247 ttgagcccaggagggcgaagttacagtgagctgtggttgtgccactgcactcc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524396 53 - 229590362 ttgagcctaggatggcgaagctacagtgagctgtggttgtgccactgcactcc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43578 53 +     87690 ttgagcccaggagggcgaagctacagtgagctgtggttgtgccactgcactcc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207550 53 -    231459 ctgagcccaggagggcgaagctacagtgagctgtggttgtgccactgcactcc
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549936 53 + 130588469 ctgagcccaggagggcgaagctacagtgagctgtggttgtgccaccgcactcc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285846 48 + 210400635 ttgagcccagg-gggcaaagttatagtgagctgtggttgtgct----cactAT
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   126220  0 -    169463 C
e otoGar3.GL873804                    1006614 34 -   1077187 I

a score=6351.000000
s hg38.chr14_KI270722v1_random         185341 4 +    194050 --agcc
s panTro4.chr14_AACZ03171041_random     31142 4 -     37130 --agcc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400164 4 +  72422247 --agcc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524449 4 - 229590362 --agcc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43631 4 +     87690 --agcc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207603 4 -    231459 --agcc
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549989 4 + 130588469 --agcc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285894 4 + 210400635 --AACT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006648 4 -   1077187 aaag--
i otoGar3.GL873804                  I 34 I 79
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                   126220 0 -    169463 C

a score=50455.000000
s hg38.chr14_KI270722v1_random         185345 27 +    194050 tgggtgacagaatgagactctgtctca
s panTro4.chr14_AACZ03171041_random     31146 27 -     37130 tgggtgacagaatgagactctgtctca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400168 27 +  72422247 tgggtgacagaatgagactgtgtctca
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524453 27 - 229590362 tgggtgacagaatgagactctgtctca
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43635 27 +     87690 tgggtgacagaatgagactctgtctca
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207607 27 -    231459 tgggtgagagaatgagactctgtctca
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130549993 27 + 130588469 tgggtgagagaatgagactctgtctca
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285898 18 + 210400635 TTT---------TGAGACAGAGTCTCA
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   431883 947 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   126220  0 -    169463 C
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=4106.000000
s hg38.chr14_KI270722v1_random         185372  5 +    194050 a------------aaCC
s panTro4.chr14_AACZ03171041_random     31173 17 -     37130 aaaccaaccaaccaacc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400195 13 +  72422247 a----aaccaaccaacc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524480  5 - 229590362 ------------aaaCC
i rheMac3.chr1                      C 0 I 4
s macFas5.chr5_KE145639_random          43662  5 +     87690 ------------aaacc
i macFas5.chr5_KE145639_random      C 0 I 4
s papAnu2.JH684932                     207634  5 -    231459 ------------aaacc
i papAnu2.JH684932                  C 0 I 4
s chlSab2.chr20                     130550020  5 + 130588469 ------------aaacc
i chlSab2.chr20                     C 0 I 12
s rhiRox1.KN297764v1                   432830  5 -    492427 ------------aaacc
i rhiRox1.KN297764v1                I 947 I 288
s calJac3.chr1                      174285916  5 + 210400635 ------------AAACC
i calJac3.chr1                      C 0 C 0
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   126220  0 -    169463 C
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=41272.000000
s hg38.chr14_KI270722v1_random         185377 18 +    194050 AACCAACCAACCAAGCAG
s panTro4.chr14_AACZ03171041_random     31190 18 -     37130 aaccaaccaaccaaGCAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400208 18 +  72422247 aaccaatcaaccaaGCAG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524489 18 - 229590362 AACCAACCAACCAAGCAG
i rheMac3.chr1                      I 4 C 0
s macFas5.chr5_KE145639_random          43671 18 +     87690 aaccaaccaaccaagcaG
i macFas5.chr5_KE145639_random      I 4 C 0
s papAnu2.JH684932                     207643 18 -    231459 aaccaaccaaccaagcaG
i papAnu2.JH684932                  I 4 C 0
s chlSab2.chr20                     130550037 18 + 130588469 aaccaaccaaccaaGCAG
i chlSab2.chr20                     I 12 C 0
s calJac3.chr1                      174285921 14 + 210400635 ----AACCAGCCAACCAG
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e tupBel1.scaffold_85531.1-8353          1563 3193 -      8353 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   126220  0 -    169463 C
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=23558.000000
s hg38.chr14_KI270722v1_random         185395  9 +    194050 AAACATTTC-
s panTro4.chr14_AACZ03171041_random     31208  9 -     37130 AAACATTTC-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400226  9 +  72422247 AAACATTTC-
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524507  9 - 229590362 AAACATTCC-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43689  9 +     87690 AAACATTCC-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207661  9 -    231459 AAACATTCC-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550055  9 + 130588469 AAACATTCC-
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285935  9 + 210400635 AAACATTTC-
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   126220  9 -    169463 AAATACTTT-
i tarSyr2.KE946707v1                C 0 I 1238
s tupBel1.scaffold_67797.1-4931          2759 10 +      4931 AAATATCTGT
i tupBel1.scaffold_67797.1-4931     I 866 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=5676.000000
s hg38.chr14_KI270722v1_random         185404 5 +    194050 -CTTAA
s panTro4.chr14_AACZ03171041_random     31217 5 -     37130 -CTTAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400235 5 +  72422247 -CGTAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524516 5 - 229590362 -GTTAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43698 5 +     87690 -GTTAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207670 5 -    231459 -GTTAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550064 5 + 130588469 -GTTAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285944 5 + 210400635 -CTTAA
i calJac3.chr1                      C 0 I 1
s tupBel1.scaffold_67797.1-4931          2769 5 +      4931 CTTTA-
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                   126229 1238 -    169463 I
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=-1120.000000
s hg38.chr14_KI270722v1_random         185409 1 +    194050 -C
s panTro4.chr14_AACZ03171041_random     31222 1 -     37130 -C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400240 1 +  72422247 -C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524521 1 - 229590362 -C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43703 1 +     87690 -C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207675 1 -    231459 -C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550069 1 + 130588469 -C
i chlSab2.chr20                     C 0 C 0
s tupBel1.scaffold_67797.1-4931          2774 1 +      4931 A-
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e calJac3.chr1                      174285949 1 + 210400635 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                   126229 1238 -    169463 I
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=135391.000000
s hg38.chr14_KI270722v1_random         185410 55 +    194050 CATCTCTGTTCCTTTTT-ATCCCCAACTCTTTCTGTGAATTATGTGACCTCAAGGA-
s panTro4.chr14_AACZ03171041_random     31223 55 -     37130 CATCTCTGTTCCTTTTT-ATCCCCAACTCTTTCTGTGAATTTTGTGACCTCAAGGA-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400241 55 +  72422247 CATCTCTTTTCCTTTTT-ATCCCCAACTCTTTCTTTGAATTATGTGACCTCACGGA-
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524522 55 - 229590362 CATCTCTGTTCCTTGTT-ATCCCCAACTCTTCCTGTGAATTATGTGACCTCAAGGG-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43704 55 +     87690 CATCTCTGTTCCTTGTT-ATCCCCAACTCTTCCTGTGAATTATGTGACCTCAAGGG-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207676 55 -    231459 CATCTCTGTTCCTTGTT-ATCCCCAACTCTTCCTGTGAATTATGTGACCTCAAGGG-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550070 54 + 130588469 CATCTCTCTTCC-TGTT-ATCCCCAACTCTTCCTGTGAATTATGTGACCTCAAGGG-
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174285950 56 + 210400635 CATCGCTATTCTTTTTTCATCCCCAACTCTTTTTGTGAATTATGTGACCTCAAGGG-
i calJac3.chr1                      I 1 C 0
s tupBel1.scaffold_67797.1-4931          2775 55 +      4931 TATGCTTACTCCTTTTT-ATTCCTAATACTT-CTGTGGATTATGTGACCTCTAAAGT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   126229 1238 -    169463 I
e otoGar3.GL873804                    1006652 79 -   1077187 I

a score=14584.000000
s hg38.chr14_KI270722v1_random         185465 6 +    194050 CAAATA
s panTro4.chr14_AACZ03171041_random     31278 6 -     37130 CAAATA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400296 6 +  72422247 CAAATA
i ponAbe2.chrUn                     C 0 I 2
s rheMac3.chr1                      225524577 6 - 229590362 CAAATA
i rheMac3.chr1                      C 0 I 2
s macFas5.chr5_KE145639_random          43759 6 +     87690 CAAATA
i macFas5.chr5_KE145639_random      C 0 I 2
s papAnu2.JH684932                     207731 6 -    231459 CAAATA
i papAnu2.JH684932                  C 0 I 2
s chlSab2.chr20                     130550124 6 + 130588469 CAAATA
i chlSab2.chr20                     C 0 I 2
s calJac3.chr1                      174286006 6 + 210400635 TAAATG
i calJac3.chr1                      C 0 I 2
s otoGar3.GL873804                    1006731 5 -   1077187 -CAGTA
i otoGar3.GL873804                  I 79 C 0
s tupBel1.scaffold_67797.1-4931          2830 6 +      4931 GTAGTA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                   126229 1238 -    169463 I

a score=5005.000000
s hg38.chr14_KI270722v1_random         185471 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     31284 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400304 1 +  72422247 A
i ponAbe2.chrUn                     I 2 C 0
s rheMac3.chr1                      225524585 1 - 229590362 A
i rheMac3.chr1                      I 2 C 0
s macFas5.chr5_KE145639_random          43767 1 +     87690 A
i macFas5.chr5_KE145639_random      I 2 C 0
s papAnu2.JH684932                     207739 1 -    231459 A
i papAnu2.JH684932                  I 2 C 0
s chlSab2.chr20                     130550132 1 + 130588469 A
i chlSab2.chr20                     I 2 C 0
s calJac3.chr1                      174286014 1 + 210400635 A
i calJac3.chr1                      I 2 C 0
s tarSyr2.KE946707v1                    46152 1 +    169463 A
i tarSyr2.KE946707v1                I 726 I 66
s otoGar3.GL873804                    1006736 1 -   1077187 A
i otoGar3.GL873804                  C 0 C 0
s tupBel1.scaffold_67797.1-4931          2836 1 +      4931 A
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I

a score=77073.000000
s hg38.chr14_KI270722v1_random         185472 35 +    194050 CAAGTG-TTTCCTGCTCAGTGTCAGTAATCTGTTCT
s panTro4.chr14_AACZ03171041_random     31285 35 -     37130 CAAGTG-TTTCCTGCTCAGTGTCAGTAATCTGTTCT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400305 35 +  72422247 CAAGTG-TTTCCTGCTCAGTGTCAGTAATCTGTTCT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524586 35 - 229590362 CAAGTG-TTTCCCACTTAGTGTCAGTAATCTGTTCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43768 35 +     87690 CAAGTG-TTTCCCACTTAGTGTCAGTAATCTGTTCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207740 36 -    231459 CAAGTGTTTTCCCACTTAGTGTCAGTAATCTGTTCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550133 35 + 130588469 CAAGTG-TTTCCCACTTAGTGTCAGTAATCTGTTCT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286015 31 + 210400635 TAAGTG-TTTCCCACTTAGTGTCAGTAATCTG----
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006737 14 -   1077187 GAAGAA-CAACCAGC---------------------
i otoGar3.GL873804                  C 0 C 0
s tupBel1.scaffold_67797.1-4931          2837 33 +      4931 CAAATG---TCCCACTGAATTTCAGTAATCTGGTTC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995175 151 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46153 66 +    169463 I

a score=3276.000000
s hg38.chr14_KI270722v1_random         185507 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     31320 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400340 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524621 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43803 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207776 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550168 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s saiBol1.JH378110                    2995326 1 +  49021937 T
i saiBol1.JH378110                  I 151 I 68
s tupBel1.scaffold_67797.1-4931          2870 1 +      4931 T
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e calJac3.chr1                      174286046 0 + 210400635 C
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46153 66 +    169463 I
e otoGar3.GL873804                    1006751 0 -   1077187 C

a score=26666.000000
s hg38.chr14_KI270722v1_random         185508 9 +    194050 GGAAATTAT
s panTro4.chr14_AACZ03171041_random     31321 9 -     37130 GGAAATTAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400341 9 +  72422247 GGAAATTAT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524622 9 - 229590362 GGAAATCAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43804 9 +     87690 GGAAATCAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207777 9 -    231459 GGAAATCAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550169 9 + 130588469 GGAAATCAT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286046 7 + 210400635 --AAATTAT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006751 7 -   1077187 --ACATTAT
i otoGar3.GL873804                  C 0 I 11
s tupBel1.scaffold_67797.1-4931          2871 9 +      4931 AAAAATCAT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995327 68 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46153 66 +    169463 I

a score=36032.000000
s hg38.chr14_KI270722v1_random         185517 11 +    194050 AAATTCTGTAG
s panTro4.chr14_AACZ03171041_random     31330 11 -     37130 AAATTCTGTAG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400350 11 +  72422247 AAATTCTGTAG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524631 11 - 229590362 AAATTCTGTAG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43813 11 +     87690 AAATTCTGTAG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207786 11 -    231459 AAATTCTGTAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550178 11 + 130588469 AAATTCTGTAG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286053 11 + 210400635 AAATTCTGTAG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          2880 11 +      4931 AAATTCTGCAG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995327 68 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46153 66 +    169463 I
e otoGar3.GL873804                    1006758 11 -   1077187 I

a score=29850.000000
s hg38.chr14_KI270722v1_random         185528 10 +    194050 -GAAAACAATA
s panTro4.chr14_AACZ03171041_random     31341 10 -     37130 -GAAAACAATA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400361 10 +  72422247 -GAAAACAATA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524642 10 - 229590362 -GAAAATAATA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43824 10 +     87690 -GAAAATAATA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207797 10 -    231459 -GAAAATAAta
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550189 10 + 130588469 -GAAAATAATA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286064 10 + 210400635 -GAAAACAATA
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1006769  9 -   1077187 --AAAGTAAGA
i otoGar3.GL873804                  I 11 I 3
s tupBel1.scaffold_67797.1-4931          2891 11 +      4931 GAAAAATAATA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995327 68 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46153 66 +    169463 I

a score=4190.000000
s hg38.chr14_KI270722v1_random         185538 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     31351 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400371 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524652 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43834 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207807 1 -    231459 g
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550199 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286074 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    46219 1 +    169463 G
i tarSyr2.KE946707v1                I 66 C 0
s otoGar3.GL873804                    1006781 1 -   1077187 A
i otoGar3.GL873804                  I 3 C 0
s tupBel1.scaffold_67797.1-4931          2902 1 +      4931 G
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42249 302 -     43889 I
e saiBol1.JH378110                    2995327 68 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I

a score=2275.000000
s hg38.chr14_KI270722v1_random         185539 2 +    194050 CA
s panTro4.chr14_AACZ03171041_random     31352 2 -     37130 CA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400372 2 +  72422247 TA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524653 2 - 229590362 CA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43835 2 +     87690 CA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207808 2 -    231459 ca
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550200 2 + 130588469 CA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286075 2 + 210400635 CA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    46220 2 +    169463 CC
i tarSyr2.KE946707v1                C 0 I 127
s micMur1.scaffold_18511                42551 1 -     43889 C-
i micMur1.scaffold_18511            I 302 I 578
s otoGar3.GL873804                    1006782 2 -   1077187 CA
i otoGar3.GL873804                  C 0 I 336
s tupBel1.scaffold_67797.1-4931          2903 2 +      4931 CG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e saiBol1.JH378110                    2995327 68 +  49021937 I
e panPan1.JH650567                      20340 0 -     44305 I

a score=84806.000000
s hg38.chr14_KI270722v1_random         185541 35 +    194050 ----TATTTTACATACTTAAAAAGGGAATATTAGACAGT
s panTro4.chr14_AACZ03171041_random     31354 35 -     37130 ----TATTTTACATACTTAAAAAGGGAAGATTAGACAGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400374 35 +  72422247 ----TATTTTACATACTTAAAAAAGGAAGATTAGACAGT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524655 35 - 229590362 ----TATTTTACATATTTAAAGAGGGAAGATTAGACCAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43837 35 +     87690 ----TATTTTACATATTTAAAGAGGGAAGATTAGACCAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207810 35 -    231459 ----tattttacatatttaaagagGGAAGATTAGACCAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550202 35 + 130588469 ----TATTTTACATATTTAAAAAGGGAAGATTAGACTGT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286077 35 + 210400635 ----TATTTTATATATTTAAAAAGGGAAGATTAGACTGT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          2905 39 +      4931 aatttttttttttaatttaaaatGAGAAAATAAAATTGC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e nasLar1.chr9                        3122244 195 - 124503471 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e saiBol1.JH378110                    2995327 68 +  49021937 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46222 127 +    169463 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=9195.000000
s hg38.chr14_KI270722v1_random         185576 2 +    194050 GT
s panTro4.chr14_AACZ03171041_random     31389 2 -     37130 GT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400409 2 +  72422247 GT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524690 2 - 229590362 GT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43872 2 +     87690 GT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207845 2 -    231459 GT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550237 2 + 130588469 GT
i chlSab2.chr20                     C 0 C 0
s nasLar1.chr9                        3122439 2 - 124503471 GT
i nasLar1.chr9                      I 195 N 0
s calJac3.chr1                      174286112 2 + 210400635 GT
i calJac3.chr1                      C 0 C 0
s saiBol1.JH378110                    2995395 2 +  49021937 GT
i saiBol1.JH378110                  I 68 N 0
s tupBel1.scaffold_67797.1-4931          2944 2 +      4931 AT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46222 127 +    169463 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=186749.000000
s hg38.chr14_KI270722v1_random         185578 81 +    194050 CTCACTTCTATTCC-AACCAGTATCTTAAAATGTAAGTAAAATACCGTACAATGCTCAC-TCGTAAGAGATCCTTTTTGTGTA
s panTro4.chr14_AACZ03171041_random     31391 81 -     37130 CTCACTTCTATTCC-AACCAGTGTCTTAAAATGTAAGTAAAATACAGTACAATGCTCAC-TCGCAAGAGATCCTTTTTGTGTA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400411 82 +  72422247 CTCACTTCTATTCC-AACCAGTATCTTAAAATGTAAGTAAAATACAGTACAATGCTCACTTTGTAAGAGATCCTTTTTGAGTA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524692 82 - 229590362 CTCACTTCTATTCCAAACCAGTGTCTTAAAATGTAAGTAAAATACAGTACAATGCTTAC-TTATAAGAGATCCTTTTTGTGTA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43874 82 +     87690 CTCACTTCTATTCCAAACCAGTGTCTTAAAATGTAAGTAAAATACAGTACAATGCTTAC-TTATAAGAGATCCTTTTTGTGTA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207847 82 -    231459 CTCACTTCTGTTCCAAACCAGTGTcttaaaatgtaagtaaaatacAGTACAATGCTTAC-TTATAAGAGATCCTTTTTGtgta
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550239 82 + 130588469 CTCACTTCTGTTCCAAACCAGTGTCTTAAAATGTAAGTAAAATACAGTACAATGCTTAC-TTATAAGAGATCCTTTTTGTGTA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286114 82 + 210400635 CCCACTTCTACTCCAAACCAATACCTTAAAATATAAGTAGAATACAGTACAATGCTCAC-TTGTAAGAGATCCTTTTTGTGTA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          2946 42 +      4931 TACACTTTTACTCCAAATCAG-----TAAAATGTAAATAAA--ACAGTA----------------------------------
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   432835 288 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46222 127 +    169463 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=-1058.000000
s hg38.chr14_KI270722v1_random         185659 2 +    194050 TT-
s panTro4.chr14_AACZ03171041_random     31472 2 -     37130 TT-
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400493 1 +  72422247 T--
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524774 2 - 229590362 TT-
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43956 2 +     87690 TT-
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207929 2 -    231459 tt-
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550321 2 + 130588469 TT-
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   433123 2 -    492427 TT-
i rhiRox1.KN297764v1                I 288 C 0
s calJac3.chr1                      174286196 2 + 210400635 TT-
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          2988 2 +      4931 -TA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46222 127 +    169463 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=10764.000000
s hg38.chr14_KI270722v1_random         185661 3 +    194050 ATG
s panTro4.chr14_AACZ03171041_random     31474 3 -     37130 ATG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225524776 3 - 229590362 ATG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43958 3 +     87690 ATG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207931 3 -    231459 atg
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550323 3 + 130588469 ATG
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   433125 3 -    492427 ATG
i rhiRox1.KN297764v1                C 0 I 285
s calJac3.chr1                      174286198 3 + 210400635 TTG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    46349 3 +    169463 ATG
i tarSyr2.KE946707v1                I 127 C 0
s tupBel1.scaffold_67797.1-4931          2990 3 +      4931 ATG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e micMur1.scaffold_18511                42552 578 -     43889 I
e ponAbe2.chrUn                      64400494 0 +  72422247 C
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=2300.000000
s hg38.chr14_KI270722v1_random         185664 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     31477 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400494 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524779 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43961 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207934 1 -    231459 t
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550326 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s tarSyr2.KE946707v1                    46352 1 +    169463 T
i tarSyr2.KE946707v1                C 0 I 85
s tupBel1.scaffold_67797.1-4931          2993 1 +      4931 C
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e calJac3.chr1                      174286201 0 + 210400635 C
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=218685.000000
s hg38.chr14_KI270722v1_random         185665 95 +    194050 TTTTTTAAAGTCAACA-GA-C-------ATTTTTATGATGTAAAGAACTTTAAAACACAATTTACTAATATGCAAAGAGTAGCTTTTTATGATTAACATGGTCT
s panTro4.chr14_AACZ03171041_random     31478 95 -     37130 TTTTTTAAAGTCAACA-GA-C-------ATTTTTATGATGTAAAGAACTTTAAAACACAATTTACTAATATGCAAAGAGTTGCTTTTTATGATTAACATGGTCT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400495 84 +  72422247 TTTTTAAAAGTCAACA-GA-C-------ATTTTTATGATGTAAAGAACCTTAAAACACAATTTACTAATATGCAAAGAGTTGCTTTTTATGAT-----------
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524780 95 - 229590362 TTTTTTAAAGTCAACA-GA-C-------ATTTTTATGATGTGAAGAACCTTAAAACACAATTTACTAATATGCAAAGAGTTGCTTTTTACGATTCACATGGTCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          43962 95 +     87690 TTTTTTAAAGTCAACA-GA-C-------ATTTTTATGATGTGAAGAACCTTAAAACACAATTTACTAATATGCAAAGAGTTGCTTTTTACGATTCACATGGTCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     207935 96 -    231459 ttttttaaagtcaaCATGA-C-------ATTTTTATGATGTGAAGAACCTTAAAACACAATTTACTAATATGCAAAGAGTTGCTTTTTGCGATTCACATGGTCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550327 95 + 130588469 TTTTTTAAAGTCAACA-GA-C-------ATTTTTATGATGTGAAGAACCTTAAAACACAATTTACTAATATGCAAAGAGTTGCTTTTTACGATTCACATCGTCT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286201 96 + 210400635 TATTTTAAAGTCAACA-GATT-------TTTTTTATGTTGTAAAGAACCTCAAAACACAGTTTACTCATATGCAAACAGTTGCTTTTTATGATTCACATCATCT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          2994 94 +      4931 CTTCATATAAATAACA-GG-CTCAAGTTATTTATATGATGTAAAACACTC---AAAACAGTCTTCTAATCTGTAGACAGT-GCTTT----GATTCATATGGGTT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46353 85 +    169463 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=-40.000000
s hg38.chr14_KI270722v1_random         185760 2 +    194050 CT
s panTro4.chr14_AACZ03171041_random     31573 2 -     37130 CT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400579 1 +  72422247 -T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524875 2 - 229590362 CT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44057 2 +     87690 CT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208031 2 -    231459 CT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550422 2 + 130588469 CT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286297 2 + 210400635 CC
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    46438 2 +    169463 GT
i tarSyr2.KE946707v1                I 85 I 196
s tupBel1.scaffold_67797.1-4931          3088 1 +      4931 C-
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=341725.000000
s hg38.chr14_KI270722v1_random         185762 140 +    194050 TAGAACCAGCAGTCTCACTGATTTCCATCAAGTTGGCATTTATTGTGATTTGCAAAACTTC-TACATGAGGTTGTGACGTTCTAGTGATTGTATTTGACAAGTAATTTCACATTATCTCCTTCACATGATTTTCTTAAAAA
s panTro4.chr14_AACZ03171041_random     31575 140 -     37130 TAGTAACAGCAGTCTCACTGATTTCCATCAAGTTGGCATTTATTGTGATTTGCCAAACTTC-TACATGAGGTTGTGACGTTCTAGTGATTGTATTTGACAAGTAATTTCACATTATCTCCTTCACATGATTTTCTTACAAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400580 140 +  72422247 TAGCACCAGCAGTCTCACTGATTTCCATCAAGTTGGCATTTATTGTGATTTGCAAAACTTC-TACATGAGGTTGTGATGTTCTAGTGATTGTATTTGACAAGTAATTTCACATTATCTCCTTCACATGATTTTCTTAAAAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225524877 136 - 229590362 TAGCACCAGCAGTCTCACTGATATCCATCAAGTTGGC----ATTGTGATTTGCAAAACTTC-GACATGAGGTTGTGATGTTCTAGTGATTGTACTTGACAAGTAATTTCACATTATCTCCTTCACATGATTTTCTTAAAAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44059 136 +     87690 TAGCACCAGCAGTCTCACTGATATCCATCAAGTTGGC----ATTGTGATTTGCAAAACTTC-GACATGAGGTTGTGATGTTCTAGTGATTGTACTTGACAAGTAATTTCACATTATCTCCTTCACATGATTTTCTTAAAAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208033 136 -    231459 TAGCACCAGCAGTCTCACTGATATCCATCAAGTTGGC----ATTGTGATTTGCAAAACTTC-GACATAAGGTTGTGATGTTCTAGTGATTGTACTTGACAAGTAATTTCACATTATCTCCTTCAcatgattttcttaaaaa
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550424 136 + 130588469 TAGCACCAGCAGTCTCACTGATTTCCGTCAAGTTGGC----ATTGTGATTTGCAAAACTTC-AACATAAGGTTGTGATGTTCTAGTGATTGTACTTGACAAGTAATTTCACATTATCTCCTTCACATGATTTTCTTAAAAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286299 140 + 210400635 TGGCACCAGCAGTCTCACCGATTTCCATGAAGTTGGCATTTATTGTGATTTACAGAACTTC-TACATGAGATCGTGATGTTCTAATGATAGTATTTGACAAGTAATTTCACATTAGCTCCTTCACACGGTTGTCTTAAAAA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3089 121 +      4931 ----------AACCACGGTGAAGTCAATCCAGTTGATATTTATAGTGCTTTGCAAAATTTCAAACATTTGATTGTGAAGTTCTAATTATTGTAATTTAAGATTGCTCTCCCAT----TCCCCAAAATG------TTAAAAA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340   0 -     44305 I
e tarSyr2.KE946707v1                    46440 196 +    169463 I
e otoGar3.GL873804                    1006784 336 -   1077187 I

a score=28132.000000
s hg38.chr14_KI270722v1_random         185902 9 +    194050 CATTGAGTT
s panTro4.chr14_AACZ03171041_random     31715 9 -     37130 CATTGAGTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400720 9 +  72422247 CATTGAGTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525013 9 - 229590362 CATTGAGTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44195 9 +     87690 CATTGAGTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208169 9 -    231459 cattgaGTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550560 9 + 130588469 CATTGAGTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286439 9 + 210400635 TATTGCGTT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007120 9 -   1077187 CATTGAAAT
i otoGar3.GL873804                  I 336 I 84
s tupBel1.scaffold_67797.1-4931          3210 9 +      4931 GTTTGAGTT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46440 196 +    169463 I

a score=114712.000000
s hg38.chr14_KI270722v1_random         185911 51 +    194050 -CTGGTGGCTTAGGTGTATCAGTTACTGTTTTCTGTCTAAAGAACT---AA-CGAA
s panTro4.chr14_AACZ03171041_random     31724 51 -     37130 -CTGGTGGCTTAGGtgtatcagttactgttttctgtctaaagaacc---aa-cgaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400729 51 +  72422247 -CTGGTGGCTTAGGtgtatcagttactgttttctgtgtaaagaacc---aa-cgaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525022 51 - 229590362 -CTGGTGGCTTAGGtgtatcagttactattttctgtctgaagaacc---aa-tgaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44204 51 +     87690 -CTGGTGGCTTAGGtgtatcagttactattttctgtctgaagaacc---aa-tgaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208178 51 -    231459 -CTGGTGGCTTAGGTGTATCAGTTACTATTTTCTGTCTGAAGAACC---AA-CGAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550569 51 + 130588469 -CTGGTGGCGTAGGtgtatcagttactattttctgtctaaagaacc---aa-tgaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286448 48 + 210400635 -CTGGTGGCTTAGGTGTATC----ACTGTTCTctgtgaaaagaacc---aaccaaa
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3219 49 +      4931 CCTG--AACTCAGATGTAttagtt----tttgttgtgtaacacattttaaa-caaa
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e micMur1.scaffold_18511                42552 578 -     43889 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46440 196 +    169463 I
e otoGar3.GL873804                    1007129 84 -   1077187 I

a score=52181.000000
s hg38.chr14_KI270722v1_random         185962 16 +    194050 ACTCAATGGCTTAAAA
s panTro4.chr14_AACZ03171041_random     31775 16 -     37130 actcaatggcttaaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400780 16 +  72422247 actcaatggcttaaaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525073 16 - 229590362 actcactggcttaaaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44255 16 +     87690 actcactggcttaaaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208229 16 -    231459 ACTCACTGGCTTAAAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550620 16 + 130588469 actcactggcttaaaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286496 16 + 210400635 actcactggcttaaaa
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                43130 16 -     43889 acttactggcttaaca
i micMur1.scaffold_18511            I 578 C 0
s tupBel1.scaffold_67797.1-4931          3268 12 +      4931 ----atcggctttaaa
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433128 285 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46440 196 +    169463 I
e otoGar3.GL873804                    1007129 84 -   1077187 I

a score=12107.000000
s hg38.chr14_KI270722v1_random         185978 5 +    194050 -AGAAG
s panTro4.chr14_AACZ03171041_random     31791 5 -     37130 -agaag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400796 5 +  72422247 -agaag
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525089 5 - 229590362 -agaag
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44271 5 +     87690 -agaag
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208245 5 -    231459 -AGAAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550636 5 + 130588469 -agaag
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   433413 5 -    492427 -AGAAG
i rhiRox1.KN297764v1                I 285 C 0
s calJac3.chr1                      174286512 5 + 210400635 -agaaa
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_18511                43146 4 -     43889 -aaaa-
i micMur1.scaffold_18511            C 0 C 0
s tupBel1.scaffold_67797.1-4931          3280 4 +      4931 aaga--
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46440 196 +    169463 I
e otoGar3.GL873804                    1007129 84 -   1077187 I

a score=80355.000000
s hg38.chr14_KI270722v1_random         185983 17 +    194050 TGACCATTTTATTTGAT
s panTro4.chr14_AACZ03171041_random     31796 17 -     37130 tgaccattttatttgat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400801 17 +  72422247 tgaccgctttatttgat
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525094 17 - 229590362 tgaccgttttatttgat
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44276 17 +     87690 tgaccgttttatttgat
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208250 17 -    231459 TGACCGTTTTATTTGAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550641 17 + 130588469 tgaccattttatttgat
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   433418 17 -    492427 TGACTGTTTTATTTGAT
i rhiRox1.KN297764v1                C 0 I 380
s calJac3.chr1                      174286517 17 + 210400635 caactgttttatttgat
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    46636 17 +    169463 catccattttattttat
i tarSyr2.KE946707v1                I 196 C 0
s micMur1.scaffold_18511                43150 17 -     43889 caaccattttatttgat
i micMur1.scaffold_18511            C 0 N 0
s tupBel1.scaffold_67797.1-4931          3284 15 +      4931 --accatttaatttgat
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e panPan1.JH650567                      20340  0 -     44305 I
e otoGar3.GL873804                    1007129 84 -   1077187 I

a score=-794.000000
s hg38.chr14_KI270722v1_random         186000 3 +    194050 ---AGA
s panTro4.chr14_AACZ03171041_random     31813 3 -     37130 ---aga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400818 3 +  72422247 ---aga
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525111 3 - 229590362 ---aga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44293 3 +     87690 ---aga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208267 3 -    231459 ---AGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550658 3 + 130588469 ---aga
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286534 3 + 210400635 ---tga
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    46653 3 +    169463 ---tgt
i tarSyr2.KE946707v1                C 0 I 2443
s otoGar3.GL873804                    1007213 3 -   1077187 ---ggt
i otoGar3.GL873804                  I 84 C 0
s tupBel1.scaffold_67797.1-4931          3299 3 +      4931 tct---
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I

a score=48804.000000
s hg38.chr14_KI270722v1_random         186003 17 +    194050 AGTTCTGTTGATTCACA
s panTro4.chr14_AACZ03171041_random     31816 17 -     37130 agttctgttgattcaca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400821 17 +  72422247 agttctgttgattcaca
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525114 17 - 229590362 agttctgttgattcaca
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44296 17 +     87690 agttctgttgattcaca
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208270 17 -    231459 AGTTCTGTTGATTCACA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550661 17 + 130588469 agttctgttgattcaca
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286537 17 + 210400635 ggttctactgattcaca
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007216 17 -   1077187 cttcctgtgagtcagca
i otoGar3.GL873804                  C 0 I 45
s tupBel1.scaffold_67797.1-4931          3302 17 +      4931 gtttctgtggatcagca
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=126763.000000
s hg38.chr14_KI270722v1_random         186020 45 +    194050 TTTTAGCTTGTGTTCACCTGGGCATTTCCTTTGCTAATGTTGTCT
s panTro4.chr14_AACZ03171041_random     31833 45 -     37130 ttttggcttgtgttcacctgggcatttcctttgctaatgttgtct
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400838 45 +  72422247 ttttggcgtgtgttcacctgggcatttcctttgctaatgttgtct
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525131 45 - 229590362 ttttggcgtgtgttcacctgggcatttcctttgctaatgttgtct
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44313 45 +     87690 ttttggcgtgtgttcacctgggcatttcctttgctaatgttgtct
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208287 45 -    231459 TTTTGGCGTGTGTTCACCTGGGCATTTCCTTTGCTAATGTTGTCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550678 45 + 130588469 ttttggtgtgtgttcacctgggcatttcctttgctaatgttgtct
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286554 45 + 210400635 ttttggcacgtgttcacctgggcatttcctatgctaatgttgtct
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3319 43 +      4931 -tttgggctg-actcacttgggaagttcttatgctagtgttgcct
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007233 45 -   1077187 I

a score=3321.000000
s hg38.chr14_KI270722v1_random         186065 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     31878 1 -     37130 g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400883 1 +  72422247 g
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525176 1 - 229590362 g
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44358 1 +     87690 g
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208332 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550723 1 + 130588469 g
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286599 1 + 210400635 g
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007278 1 -   1077187 a
i otoGar3.GL873804                  I 45 I 152
s tupBel1.scaffold_67797.1-4931          3362 1 +      4931 g
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=174037.000000
s hg38.chr14_KI270722v1_random         186066 66 +    194050 GAT-CACAAATgaggctttagtcatctggtgccttcactcacatgtctgg-tggttcatgctgacACT
s panTro4.chr14_AACZ03171041_random     31879 66 -     37130 gat-cacaaatgaggctttagtcatctggtgccttcactcacatatctgg-tggttcatgctgacACT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400884 66 +  72422247 gat-cacaaatgaggctttagtcatctggtgccttcactcacatgtctgg-tggttcatgctgacACT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525177 66 - 229590362 gat-cacagatgaggctttagtcatctggtgccttcactcacatgtctga-tggttcatgctgaccct
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44359 66 +     87690 gat-cacagatgaggctttagtcatctggtgccttcactcacatgtctga-tggttcatgctgaccct
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208333 66 -    231459 GAT-CACAGATGAGGCTTTAGTCATCTGGTGCCTTCACTCACATGTCTGA-TGGTTCATGCTGACCCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550724 66 + 130588469 gat-cacaaatgaggctttagtcatctggtgccttcactcacatgtctgg-tggttcatgctgaccct
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286600 66 + 210400635 gat-cacaaatgaagctttagtcatctgatgcctttactcacacgtatgg-tggttcatgctgaccct
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3363 59 +      4931 gATACATAAAAGGGGATTTAGTCACCTAGTGTCTTAACTGA---GTCTGGTTGGTTTACGAT------
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007279 152 -   1077187 I

a score=14628.000000
s hg38.chr14_KI270722v1_random         186132 6 +    194050 TGtcca
s panTro4.chr14_AACZ03171041_random     31945 6 -     37130 TGtcca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400950 6 +  72422247 TGtcca
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525243 6 - 229590362 tgtccg
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44425 6 +     87690 tgtccg
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208399 6 -    231459 TGTCCG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550790 6 + 130588469 tgtccg
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286666 6 + 210400635 tgtcta
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007431 6 -   1077187 tgccaa
i otoGar3.GL873804                  I 152 I 85
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e tupBel1.scaffold_67797.1-4931          3422 0 +      4931 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=157548.000000
s hg38.chr14_KI270722v1_random         186138 67 +    194050 agaaggcaagcaccagtgggcaagtacttttccaacctatattttcatcatattttct-atgtcccat
s panTro4.chr14_AACZ03171041_random     31951 67 -     37130 agaaggcaagcacaagtgggcaagtacttttccaacctatattttcatcatattttct-atgtcccat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64400956 67 +  72422247 agaaggcaagcaccagtgggcaagtacttttccaacatatattttcatcatattttct-atgtcccat
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525249 67 - 229590362 agaaggcaagcaccagtgggcaagtacttttccagactatattttcatcatattttcc-atgtcccat
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44431 67 +     87690 agaaggcaagcaccagtgggcaagtacttttccagcctatattttcatcatattttcc-atgtcccat
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208405 67 -    231459 AGAAGGCAAGCACCAGTGGGCAAGTACTTTTCCAGCCtatattttcatcatattttcc-ATGTCCCAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550796 67 + 130588469 agaaggcaagcaccagtgggcaagtacttttccagcctatattttcatcatattttct-atgtcccat
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286672 68 + 210400635 agaaggtaagcaccagtgggcaagtacttttccaacctatattttcatcatattttctaatgtcccat
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3422 47 +      4931 --------AGTTTCATT---CAAATG-TCCTGTGGTTTATACTGTTG-------A-CT-ATGCCCTAT
i tupBel1.scaffold_67797.1-4931     C 0 I 71
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007437 85 -   1077187 I

a score=37237.000000
s hg38.chr14_KI270722v1_random         186205 18 +    194050 t-ggccgaagcaactcaaa
s panTro4.chr14_AACZ03171041_random     32018 18 -     37130 t-ggccgaagcaactcaaa
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401023 18 +  72422247 t-ggccaaagcaagtcaaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525316 18 - 229590362 t-ggcaaaagcaagtcaaa
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44498 18 +     87690 t-ggcaaaagcaagtcaaa
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208472 18 -    231459 T-GGCAAAAGCAAGTCAAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550863 18 + 130588469 t-ggcaaaagcaagtcaaa
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286740 19 + 210400635 taggccaaagcaagtcaaa
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e tupBel1.scaffold_67797.1-4931          3469 71 +      4931 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007437 85 -   1077187 I

a score=2300.000000
s hg38.chr14_KI270722v1_random         186223 1 +    194050 t
s panTro4.chr14_AACZ03171041_random     32036 1 -     37130 c
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401041 1 +  72422247 t
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525334 1 - 229590362 t
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44516 1 +     87690 t
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208490 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550881 1 + 130588469 t
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286759 1 + 210400635 t
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007522 1 -   1077187 t
i otoGar3.GL873804                  I 85 I 26
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e tupBel1.scaffold_67797.1-4931          3469 71 +      4931 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=46991.000000
s hg38.chr14_KI270722v1_random         186224 25 +    194050 ggcagaaccccattcattatcagag
s panTro4.chr14_AACZ03171041_random     32037 25 -     37130 ggcagaaccccattcattatcagag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401042 25 +  72422247 gccagagctccattcattatgagaa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525335 25 - 229590362 ggcagagccctgttcgttatcagag
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44517 25 +     87690 ggcagagccctgttcgttatcagag
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208491 25 -    231459 GGCAGAGCCCTGTTCGTTATCAGAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550882 25 + 130588469 ggcagagccctggtcgttatcggag
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286760 23 + 210400635 ggcagagccccatttgttatcag--
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e tupBel1.scaffold_67797.1-4931          3469 71 +      4931 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007523 26 -   1077187 I

a score=-880.000000
s hg38.chr14_KI270722v1_random         186249 1 +    194050 -c
s panTro4.chr14_AACZ03171041_random     32062 1 -     37130 -c
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401067 1 +  72422247 -c
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525360 1 - 229590362 -c
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44542 1 +     87690 -c
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208516 1 -    231459 -C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550907 1 + 130588469 -c
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286783 1 + 210400635 -c
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007549 1 -   1077187 g-
i otoGar3.GL873804                  I 26 I 302
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e tupBel1.scaffold_67797.1-4931          3469 71 +      4931 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=67105.000000
s hg38.chr14_KI270722v1_random         186250 32 +    194050 acactctatgaagtcttagatactgggagact
s panTro4.chr14_AACZ03171041_random     32063 32 -     37130 acactctatgaggtcttagatactgggagact
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401068 32 +  72422247 acactctatgaggtcttagatacagggagact
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525361 32 - 229590362 atactctatgaggtctgagatacagggagaca
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44543 32 +     87690 atactctatgaggtctgagatacagggacaca
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208517 32 -    231459 GTACTCTATGAGGTCTGAGATACAGGGAGACA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130550908 32 + 130588469 atactgtatgaggtctgagatacagggagaca
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286784 32 + 210400635 atactgtatggggtcttagatacagggagaca
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e tupBel1.scaffold_67797.1-4931          3469 71 +      4931 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I

a score=252265.000000
s hg38.chr14_KI270722v1_random         186282  98 +    194050 tgtcactaagaaacattactaaaacagtatatcccaAGAAATA--TACACTATGTACATTTTTCC--CCCT-----ATATAATCGTGGGCAGAAAATGTTGGGCTGC
s panTro4.chr14_AACZ03171041_random     32095  98 -     37130 tgtcactaggaaacattactaaaacagtatatcccaAGAAATA--TACAATATGTACATTTTTCC--CCCT-----ATATAATCGTGGGCAGAAAATGTTGGGTTGC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401100  98 +  72422247 tgtcactaggaaacattactaaaacagtatatcccaAGAAATA--TACAATATGTACATCTTTCC--CCCT-----ATATAATTGTGGGCAAAAAATGTTGGGTTGC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525393  98 - 229590362 tgtcattaggaaacattactaaaacagtatatcccaAGAAATA--TACAATATGTACATTTTCCC--CCCT-----ATATAATTGTAGGCAAAAAATGTTGGGTTGC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44575  98 +     87690 tgtcattaggaaacattactaaaacagtatatcccaAGAAATA--TACAATATGTACATTTTCCC--CCCT-----ATATAATTGTAGGCAAAAAATGTTGGGTTGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208549  98 -    231459 TGTCATTAGGAAACATTACTAAAACAGTATATCCCAAGAAATA--TACAATATGTACATTTTCCC--CCCT-----ATATAATTGTGGGCAAAAAATGTTGGGTTGC
i papAnu2.JH684932                  C 0 I 2
s chlSab2.chr20                     130550940  97 + 130588469 tgtcattaggaaacattactaagacagtatatcccaAGAAATA--TACAATATGTACATTTT-CC--CCCT-----ATATAATTGTGGGCAAAAAATGTTGGGTTGC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286816  99 + 210400635 tgtcattagg----attactaaaacagtgtatcccaAGAAATA--AACAGTATGTACATTTTCAC--CCCTATATAATATAATTGTGGGCAAAGAATGTTGGCTTGC
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3540 102 +      4931 TGCTTTGGGGAACCATTGCTGCAATCTTGTACCACAGAAAAAAACTACAGTATGTACATTTTTTTTACCCT-----GTATAATTGTAGGTGAAAAATGGTGAGTTGT
i tupBel1.scaffold_67797.1-4931     I 71 C 0
e rhiRox1.KN297764v1                   433435 380 -    492427 I
e panPan1.JH650567                      20340   0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I

a score=10215.000000
s hg38.chr14_KI270722v1_random         186380 9 +    194050 AAGATGCAT
s panTro4.chr14_AACZ03171041_random     32193 9 -     37130 AAGATGCAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401198 9 +  72422247 AAGATGCAT
i ponAbe2.chrUn                     C 0 C 0
s rhiRox1.KN297764v1                   433815 9 -    492427 AAGATGCAT
i rhiRox1.KN297764v1                I 380 C 0
s calJac3.chr1                      174286915 9 + 210400635 AAGATGCGT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3642 7 +      4931 --GATGTAT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551037 0 + 130588469 C
e papAnu2.JH684932                     208647 2 -    231459 I
e macFas5.chr5_KE145639_random          44673 0 +     87690 C
e rheMac3.chr1                      225525491 0 - 229590362 C

a score=17672.000000
s hg38.chr14_KI270722v1_random         186389 25 +    194050 TCTTTCAATGATGCTTAGAGATATA
s panTro4.chr14_AACZ03171041_random     32202 25 -     37130 TCTTTCAATGATTCTTAGGTATATA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401207 25 +  72422247 TCTTTCAATGATGCTTAGGTATATA
i ponAbe2.chrUn                     C 0 C 0
s rhiRox1.KN297764v1                   433824 25 -    492427 TCTTTCAGTGATGTGTAGGTATATA
i rhiRox1.KN297764v1                C 0 C 0
s calJac3.chr1                      174286924 25 + 210400635 ACTTTCCATGATGCTTAGGTATATA
i calJac3.chr1                      C 0 C 0
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551037  0 + 130588469 C
e papAnu2.JH684932                     208647  2 -    231459 I
e macFas5.chr5_KE145639_random          44673  0 +     87690 C
e rheMac3.chr1                      225525491  0 - 229590362 C

a score=546.000000
s hg38.chr14_KI270722v1_random         186414 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     32227 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401232 1 +  72422247 A
i ponAbe2.chrUn                     C 0 C 0
s rhiRox1.KN297764v1                   433849 1 -    492427 A
i rhiRox1.KN297764v1                C 0 I 224
e calJac3.chr1                      174286949 0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649 0 +      4931 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551037 0 + 130588469 C
e papAnu2.JH684932                     208647 2 -    231459 I
e macFas5.chr5_KE145639_random          44673 0 +     87690 C
e rheMac3.chr1                      225525491 0 - 229590362 C

a score=1820.000000
s hg38.chr14_KI270722v1_random         186415 2 +    194050 AA
s panTro4.chr14_AACZ03171041_random     32228 2 -     37130 AA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401233 2 +  72422247 AA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525491 2 - 229590362 AA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44673 2 +     87690 AA
i macFas5.chr5_KE145639_random      C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949 0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649 0 +      4931 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551037 0 + 130588469 C
e papAnu2.JH684932                     208647 2 -    231459 I

a score=85047.000000
s hg38.chr14_KI270722v1_random         186417 68 +    194050 GATGCATCCTTTCTATGATGCATAGGTATATAAGAGATGCATCCTTTCGATGATGAGTAGGTATATAA
s panTro4.chr14_AACZ03171041_random     32230 68 -     37130 GATGCATACTTTCGATGATGCATAGGTATATAAGAGATGCATCCTTTCGATGATGAGTAGGTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401235 68 +  72422247 AATGCATCATTTCAATGATGCGTAGGTATATAAAAGATGCATCCTTTCAGTGATGAGTAGGTATATAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525493 68 - 229590362 GAAGCATCCTTTCAATGATGCATAGGTATATAAAAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44675 68 +     87690 GATGCATCCTTTCAATGATGCATAGGTATATAAAAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208649 68 -    231459 GATGCATCCTTTCAATGATGCGTAGGTATATAAAAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i papAnu2.JH684932                  I 2 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551037  0 + 130588469 C

a score=38233.000000
s hg38.chr14_KI270722v1_random         186485 23 +    194050 AAGATGCATCCTTTCAGTGATGC
s panTro4.chr14_AACZ03171041_random     32298 23 -     37130 AAGATGCATCCTTTCAGTGATGC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401303 21 +  72422247 A--ATGCATCCTTTCAGTGATGC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525561 23 - 229590362 AAGATACATTCTTTCAATGATGC
i rheMac3.chr1                      C 0 T 93
s macFas5.chr5_KE145639_random          44743 23 +     87690 AAGATGCATTCTTTCAATGATGC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208717 23 -    231459 AAGATGCATCCTTTCAATGATGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551037 23 + 130588469 AAGATGCATCCTTTCAGTGATGC
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I

a score=10230.000000
s hg38.chr14_KI270722v1_random         186508 12 +    194050 TTAGGTATATAA
s panTro4.chr14_AACZ03171041_random     32321 12 -     37130 TTAGGTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401324 12 +  72422247 TTAGGTATATAA
i ponAbe2.chrUn                     C 0 C 0
s macFas5.chr5_KE145639_random          44766 12 +     87690 AAAGGTATAAAA
i macFas5.chr5_KE145639_random      C 0 T 70
s papAnu2.JH684932                     208740 12 -    231459 AAAGGTATAAAA
i papAnu2.JH684932                  C 0 T 70
s chlSab2.chr20                     130551060 12 + 130588469 ATAGTTATATAA
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=5229.000000
s hg38.chr14_KI270722v1_random         186520 6 +    194050 AACATA
s panTro4.chr14_AACZ03171041_random     32333 6 -     37130 AACATA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401336 6 +  72422247 AACATA
i ponAbe2.chrUn                     C 0 C 0
s macFas5.chr5_KE145639_random          44708 6 +     87690 AAGATG
i macFas5.chr5_KE145639_random      T 70 C 0
s papAnu2.JH684932                     208682 6 -    231459 AAGATG
i papAnu2.JH684932                  T 70 C 0
s chlSab2.chr20                     130551072 6 + 130588469 AAGATG
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949 0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649 0 +      4931 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=22617.000000
s hg38.chr14_KI270722v1_random         186526 29 +    194050 CATCCTTTCAATAATAAGTAGATATATAA
s panTro4.chr14_AACZ03171041_random     32339 29 -     37130 CATCCTTTCAATGATAAGTAGTTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s macFas5.chr5_KE145639_random          44714 29 +     87690 CATCCTTTCAATGATGCGTAGGTATATAA
i macFas5.chr5_KE145639_random      C 0 T 70
s papAnu2.JH684932                     208688 29 -    231459 CATCCTTTCAATGATGCGTAGGTATATAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551078 29 + 130588469 CATCCTTTCAGTGATGCGTAGTTATATAA
i chlSab2.chr20                     C 0 T 70
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=17198.000000
s hg38.chr14_KI270722v1_random         186555 35 +    194050 AAGATGCATCCTTTCAACGATGCTTAGGTATATAA
s panTro4.chr14_AACZ03171041_random     32368 35 -     37130 AAGATGCATCCTTTCAATGATGCTTAGGTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s macFas5.chr5_KE145639_random          44673 35 +     87690 AAGATGCATCCTTTCAATGATGCATAGGTATATAA
i macFas5.chr5_KE145639_random      T 70 C 0
s papAnu2.JH684932                     208717 35 -    231459 AAGATGCATCCTTTCAATGATGCAAAGGTATAAAA
i papAnu2.JH684932                  C 0 T 70
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551107 70 + 130588469 T
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=15990.000000
s hg38.chr14_KI270722v1_random         186590 32 +    194050 AAGATTCATCCTTTCAATGATGTGTAAGTGTA
s panTro4.chr14_AACZ03171041_random     32403 32 -     37130 AAGATTCATCCTTTCAATGATGCGTAGGTGTA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s macFas5.chr5_KE145639_random          44708 32 +     87690 AAGATGCATCCTTTCAATGATGCGTAGGTATA
i macFas5.chr5_KE145639_random      C 0 T 70
s papAnu2.JH684932                     208682 32 -    231459 AAGATGCATCCTTTCAATGATGCGTAGGTATA
i papAnu2.JH684932                  T 70 T 70
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551107 70 + 130588469 T
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=881.000000
s hg38.chr14_KI270722v1_random         186622 3 +    194050 TGA
s panTro4.chr14_AACZ03171041_random     32435 3 -     37130 TGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s macFas5.chr5_KE145639_random          44670 3 +     87690 TGC
i macFas5.chr5_KE145639_random      T 70 C 0
s papAnu2.JH684932                     208644 3 -    231459 TGC
i papAnu2.JH684932                  T 70 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949 0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649 0 +      4931 C
e ponAbe2.chrUn                      64401342 0 +  72422247 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e chlSab2.chr20                     130551107 70 + 130588469 T
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=26554.000000
s hg38.chr14_KI270722v1_random         186625 35 +    194050 AAGATGCATACTTTCAATGATACTTAAGTATATAA
s panTro4.chr14_AACZ03171041_random     32438 35 -     37130 ACGATGCATACTTTCAATGATGCTTAAGTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s macFas5.chr5_KE145639_random          44673 35 +     87690 AAGATGCATCCTTTCAATGATGCATAGGTATATAA
i macFas5.chr5_KE145639_random      C 0 T 35
s papAnu2.JH684932                     208647 35 -    231459 AAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i papAnu2.JH684932                  C 0 T 35
s chlSab2.chr20                     130551037 35 + 130588469 AAGATGCATCCTTTCAGTGATGCATAGTTATATAA
i chlSab2.chr20                     T 70 T 35
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I
e rheMac3.chr1                      225525584 93 - 229590362 T

a score=7390.000000
s hg38.chr14_KI270722v1_random         186660 6 +    194050 AAGATG
s panTro4.chr14_AACZ03171041_random     32473 6 -     37130 AAGATG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225525491 6 - 229590362 AAGAAG
i rheMac3.chr1                      T 93 C 0
s macFas5.chr5_KE145639_random          44673 6 +     87690 AAGATG
i macFas5.chr5_KE145639_random      T 35 C 0
s papAnu2.JH684932                     208647 6 -    231459 AAGATG
i papAnu2.JH684932                  T 35 C 0
s chlSab2.chr20                     130551037 6 + 130588469 AAGATG
i chlSab2.chr20                     T 35 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949 0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649 0 +      4931 C
e ponAbe2.chrUn                      64401342 0 +  72422247 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873804                    1007550 302 -   1077187 I

a score=26547.000000
s hg38.chr14_KI270722v1_random         186666 19 +    194050 CATACTTTCAATAATGCTT
s panTro4.chr14_AACZ03171041_random     32479 19 -     37130 CATACTTTCAATGATGCTT
i panTro4.chr14_AACZ03171041_random C 0 T 70
s rheMac3.chr1                      225525497 19 - 229590362 CATCCTTTCAATGATGCAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44679 19 +     87690 CATCCTTTCAATGATGCAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208653 19 -    231459 CATCCTTTCAATGATGCGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551043 19 + 130588469 CATCCTTTCAGTGATGCAT
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810386 19 -   6509565 CATCTTCTCAGTGAGTCTT
i otoGar3.GL873640                  n 302 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=11532.000000
s hg38.chr14_KI270722v1_random         186685 10 +    194050 AGGTATATAA
s panTro4.chr14_AACZ03171041_random     32428 10 -     37130 AGGTGTATGA
i panTro4.chr14_AACZ03171041_random T 70 C 0
s rheMac3.chr1                      225525516 10 - 229590362 AGGTATATAA
i rheMac3.chr1                      C 0 T 35
s macFas5.chr5_KE145639_random          44698 10 +     87690 AGGTATATAA
i macFas5.chr5_KE145639_random      C 0 T 35
s papAnu2.JH684932                     208672 10 -    231459 AGGTATATAA
i papAnu2.JH684932                  C 0 T 35
s chlSab2.chr20                     130551062 10 + 130588469 AGTTATATAA
i chlSab2.chr20                     C 0 T 35
s otoGar3.GL873640                    4810405 10 -   6509565 ATGGATCCAG
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=47030.000000
s hg38.chr14_KI270722v1_random         186695 35 +    194050 AAGATGCATCCTTTCAATGATGCTTAGGTATATAA
s panTro4.chr14_AACZ03171041_random     32438 35 -     37130 ACGATGCATACTTTCAATGATGCTTAAGTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225525491 35 - 229590362 AAGAAGCATCCTTTCAATGATGCATAGGTATATAA
i rheMac3.chr1                      T 35 C 0
s macFas5.chr5_KE145639_random          44673 35 +     87690 AAGATGCATCCTTTCAATGATGCATAGGTATATAA
i macFas5.chr5_KE145639_random      T 35 T 35
s papAnu2.JH684932                     208647 35 -    231459 AAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i papAnu2.JH684932                  T 35 T 35
s chlSab2.chr20                     130551037 35 + 130588469 AAGATGCATCCTTTCAGTGATGCATAGTTATATAA
i chlSab2.chr20                     T 35 C 0
s otoGar3.GL873640                    4810415 35 -   6509565 GTCCCGCATCCTCTCAGTGAGGCTTATGGATCCAG
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=49129.000000
s hg38.chr14_KI270722v1_random         186730 35 +    194050 AAGATGCGTCCTTTCAATGATGCTTAGGTATATAA
s panTro4.chr14_AACZ03171041_random     32473 35 -     37130 AAGATGCATACTTTCAATGATGCTTAGGTATATAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225525526 35 - 229590362 AAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i rheMac3.chr1                      C 0 T 70
s macFas5.chr5_KE145639_random          44673 35 +     87690 AAGATGCATCCTTTCAATGATGCATAGGTATATAA
i macFas5.chr5_KE145639_random      T 35 T 35
s papAnu2.JH684932                     208647 35 -    231459 AAGATGCATCCTTTCAATGATGCGTAGGTATATAA
i papAnu2.JH684932                  T 35 T 35
s chlSab2.chr20                     130551072 35 + 130588469 AAGATGCATCCTTTCAGTGATGCGTAGTTATATAA
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810450 35 -   6509565 GTCCCGCATCCTCTCAGTGAGGCTTATGGATCCAG
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=12101.000000
s hg38.chr14_KI270722v1_random         186765 10 +    194050 AAGATGCATC
s panTro4.chr14_AACZ03171041_random     32508 10 -     37130 AAGATGCATA
i panTro4.chr14_AACZ03171041_random C 0 T 20
s rheMac3.chr1                      225525491 10 - 229590362 AAGAAGCATC
i rheMac3.chr1                      T 70 C 0
s macFas5.chr5_KE145639_random          44673 10 +     87690 AAGATGCATC
i macFas5.chr5_KE145639_random      T 35 C 0
s papAnu2.JH684932                     208647 10 -    231459 AAGATGCATC
i papAnu2.JH684932                  T 35 C 0
s chlSab2.chr20                     130551107 10 + 130588469 AAGATGCATC
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810485 10 -   6509565 GTCCCGCATC
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=13142.000000
s hg38.chr14_KI270722v1_random         186775 15 +    194050 CTTTCAATGATGTGC
s rheMac3.chr1                      225525501 15 - 229590362 CTTTCAATGATGCAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44683 15 +     87690 CTTTCAATGATGCAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208657 15 -    231459 CTTTCAATGATGCGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551117 15 + 130588469 CTTTCAATGCTGCGT
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810495 15 -   6509565 TTCACAGTGAGGCTT
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e panTro4.chr14_AACZ03171041_random     32518 20 -     37130 T

a score=14214.000000
s hg38.chr14_KI270722v1_random         186790 10 +    194050 AGGTATATAA
s panTro4.chr14_AACZ03171041_random     32498 10 -     37130 AGGTATATAA
i panTro4.chr14_AACZ03171041_random T 20 C 0
s rheMac3.chr1                      225525516 10 - 229590362 AGGTATATAA
i rheMac3.chr1                      C 0 T 35
s macFas5.chr5_KE145639_random          44698 10 +     87690 AGGTATATAA
i macFas5.chr5_KE145639_random      C 0 T 35
s papAnu2.JH684932                     208672 10 -    231459 AGGTATATAA
i papAnu2.JH684932                  C 0 T 35
s chlSab2.chr20                     130551132 10 + 130588469 AGGTATATAA
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810510 10 -   6509565 ACGGATCCAG
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e ponAbe2.chrUn                      64401342  0 +  72422247 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=3790.000000
s hg38.chr14_KI270722v1_random         186800 6 +    194050 AAGATG-----
s panTro4.chr14_AACZ03171041_random     32508 6 -     37130 AAGATG-----
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225525491 6 - 229590362 AAGAAG-----
i rheMac3.chr1                      T 35 C 0
s macFas5.chr5_KE145639_random          44673 6 +     87690 AAGATG-----
i macFas5.chr5_KE145639_random      T 35 C 0
s papAnu2.JH684932                     208647 6 -    231459 AAGATG-----
i papAnu2.JH684932                  T 35 C 0
s chlSab2.chr20                     130551142 6 + 130588469 AAGATG-----
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810520 6 -   6509565 -----GTCCCG
i otoGar3.GL873640                  C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949 0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649 0 +      4931 C
e ponAbe2.chrUn                      64401342 0 +  72422247 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=88694.000000
s hg38.chr14_KI270722v1_random         186806 45 +    194050 CATCCTTTCAATGATGCGTAGGTATATAAAAGATGCATCTTTTCA
s panTro4.chr14_AACZ03171041_random     32514 45 -     37130 CATACTTTCAATGATGCGCAGGTATATAAAAGATGCATCCTTTCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401342 45 +  72422247 CATCCTTTCAATGATGCGTAGATATATAAAAGATGCATCCTTTCA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525497 45 - 229590362 CATCCTTTCAATGATGCATAGGTATATAAAAGATGCATCCTTTCA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44679 45 +     87690 CATCCTTTCAATGATGCATAGGTATATAAAAGATGCATCCTTTCA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208653 45 -    231459 CATCCTTTCAATGATGCGTAGGTATATAAAAGATGCATCCTTTCA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551148 45 + 130588469 CATCCTTTCAGTGATGCGTAGCTATATAAAAGATGCATCCTTTCA
i chlSab2.chr20                     C 0 C 0
s otoGar3.GL873640                    4810526 45 -   6509565 CATCTTCACAGTGAGGCTTACGGATCCAGGTCCCGCATCTTCACA
i otoGar3.GL873640                  C 0 n 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I

a score=27846.000000
s hg38.chr14_KI270722v1_random         186851 16 +    194050 ATGATGCGTAGGTATA
s panTro4.chr14_AACZ03171041_random     32559 16 -     37130 ATGATGCGTTGGTATA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401387 16 +  72422247 ATGATGCCTAGGTATA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525542 16 - 229590362 ATGATGCGTAGGTATA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44724 16 +     87690 ATGATGCGTAGGTATA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208698 16 -    231459 ATGATGCGTAGGTATA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551193 16 + 130588469 ATGCTGCGTAGGTATA
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e tupBel1.scaffold_67797.1-4931          3649  0 +      4931 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873640                    4810571  0 -   6509565 I

a score=6146.000000
s hg38.chr14_KI270722v1_random         186867 3 +    194050 TAA
s panTro4.chr14_AACZ03171041_random     32575 3 -     37130 TAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401403 3 +  72422247 TAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525558 3 - 229590362 TAA
i rheMac3.chr1                      C 0 T 70
s macFas5.chr5_KE145639_random          44740 3 +     87690 TAA
i macFas5.chr5_KE145639_random      C 0 T 70
s papAnu2.JH684932                     208714 3 -    231459 TAA
i papAnu2.JH684932                  C 0 T 70
s chlSab2.chr20                     130551209 3 + 130588469 TAA
i chlSab2.chr20                     C 0 C 0
s tupBel1.scaffold_131467.1-12168        7623 3 -     12168 TAT
i tupBel1.scaffold_131467.1-12168   n 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949 0 + 210400635 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873640                    4810571 0 -   6509565 I

a score=135800.000000
s hg38.chr14_KI270722v1_random         186870 77 +    194050 AAGATGCATCCTTTCAATGATGCTTAGGTATATAAAAGATGCATCCTTTCAGTGATACGTAGATA--------TATAAAACATGA-----
s panTro4.chr14_AACZ03171041_random     32578 77 -     37130 AAGATGCATCCTTTCAATGATGCTTAGGTATATAAAAGATGCATCCTTTCAGTGATGCGTAGATA--------TATAAAACATGA-----
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401406 77 +  72422247 AAGATGCATCCTTTCAGTGATGCTTAGGTATACAAAAGATGCATCCTTTCAATGATGCATAGATA--------TATAAAACATGA-----
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525491 77 - 229590362 AAGAAGCATCCTTTCAATGATGCATAGGTATATAAAAGATGCATCCTTTCAATGATGCGTAGGTA--------TATAAAAGATAC-----
i rheMac3.chr1                      T 70 C 0
s macFas5.chr5_KE145639_random          44673 77 +     87690 AAGATGCATCCTTTCAATGATGCATAGGTATATAAAAGATGCATCCTTTCAATGATGCGTAGGTA--------TATAAAAGATGC-----
i macFas5.chr5_KE145639_random      T 70 C 0
s papAnu2.JH684932                     208647 77 -    231459 AAGATGCATCCTTTCAATGATGCGTAGGTATATAAAAGATGCATCCTTTCAATGATGCGTAGGTA--------TATAAAAGATGC-----
i papAnu2.JH684932                  T 70 C 0
s chlSab2.chr20                     130551212 77 + 130588469 AAGATGCATCCTTTCAGTGATGCGTAGATATATAAAAGATGCATCCTTTCAATGCTGCGTAGGTA--------TATAAAAGATGC-----
i chlSab2.chr20                     C 0 C 0
s tupBel1.scaffold_131467.1-12168        7626 85 -     12168 AATATGTGTGCTTTCCATGAAGTTTCATTATATGAGA-----ATCCTTCAAAAAGTTCGTGAAAAATGTACATTATTAAAAAAACTATGG
i tupBel1.scaffold_131467.1-12168   C 0 n 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873640                    4810571  0 -   6509565 I

a score=46909.000000
s hg38.chr14_KI270722v1_random         186947 25 +    194050 ATCCTTTCAATGATGCGAAGGTATA--
s panTro4.chr14_AACZ03171041_random     32655 25 -     37130 ATCCTTTCAATGATGCGAAGGTATA--
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401483 25 +  72422247 ATCCTTTCAATGATGCGAAGGTATA--
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525568 25 - 229590362 ATTCTTTCAATGATGCAAAGGTATA--
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44750 25 +     87690 ATTCTTTCAATGATGCAAAGGTATA--
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208724 25 -    231459 ATCCTTTCAATGATGCAAAGGTATA--
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551289 25 + 130588469 ATCCTTTCAGTGATGCAAAGGTATA--
i chlSab2.chr20                     C 0 C 0
s tupBel1.scaffold_67797.1-4931          3649 27 +      4931 ATGCTTTCCACGAAATTTAAATATATG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e calJac3.chr1                      174286949  0 + 210400635 C
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873640                    4810571  0 -   6509565 I

a score=202479.000000
s hg38.chr14_KI270722v1_random         186972 84 +    194050 AAAGCAAGATATATTCTAGTGGAAACACCTATATGGAATCATGTAGAATCTCCATATTAGTAGTGAAATTGTTAATGCAGCTGA
s panTro4.chr14_AACZ03171041_random     32680 84 -     37130 AAAGCAAGATGTATTCTAGTGGAAACACCTATATGGAATCGTGTAGAATCTCCATATTAGTAGTGAAATTGTTAATGCAGCTGA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401508 84 +  72422247 AAAGCAAGATGTATTCTAGTGGGAACACCTATATGGAATCGTGTAGAATCTCCATATTAGTAGTGAAATAGATAATGCAGCTGA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525593 84 - 229590362 AAAGCAAGATGTGTTCTAGTGGAAGCACCTATATGGAATCGTGTAGAATCTCCATATTAGTAGTGAAATAGTTAATGTGGCTGA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44775 84 +     87690 AAAGCAAGATGTGTTCTAGTGGAAGCACCTATGTGGAATCGTGTAGAATCTCCATATTAGTAGTGAAATAGTTAATGTGGCTGA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208749 84 -    231459 AAAGCAAGATGTGTTCTAGTGGAAACACCTATATGGAATCGTGTAGAATCTCCATATTAGTAGTGAAATAGTTAATGTGGCTGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551314 82 + 130588469 AAAGCAAGGTGTGTTCTAGTGGAAACACCTATATGGAATCGTGTAGAATCTCCGTGTTAGTAGTGAAATAGTTAATGTG--TGA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174286949 84 + 210400635 AAAGCAAGATGTGTTCTAGTGGAAACACCTATATTAAATTATGTAGAATCTCTTTATTAGCAGTGAAATAGTTAATGCAGCCCA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3676 80 +      4931 -AAAGAAGAGGTATTGCAGAGGAAATACTCATGGGTGCTTGTTTAGTATCC---TGTTTATGGGAAAATACTTAATACAAACCA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    46656 2443 +    169463 I
e otoGar3.GL873640                    4810571  0 -   6509565 I

a score=2997.000000
s hg38.chr14_KI270722v1_random         187056 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     32764 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401592 1 +  72422247 A
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525677 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44859 1 +     87690 A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208833 1 -    231459 A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551396 1 + 130588469 A
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287033 1 + 210400635 A
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   127467 1 -    169463 A
i tarSyr2.KE946707v1                I 1238 I 1324
s tupBel1.scaffold_67797.1-4931          3756 1 +      4931 A
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873640                    4810571 0 -   6509565 I

a score=120760.000000
s hg38.chr14_KI270722v1_random         187057 50 +    194050 -----TTATATTTCTACAGTATTAATTTCATTGAAGACTAAATGTATATTTCTTT
s panTro4.chr14_AACZ03171041_random     32765 50 -     37130 -----TTATATTTCTACAATATTAATTTCATTGAAGACTAAATGTATATTTCTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401593 50 +  72422247 -----TTATATTTCTACAATATTAATTTCATTGAAGACTAAAGGTATATTTCTTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525678 50 - 229590362 -----TTATATTTCTACAATATTAATTTCATTGAAGACTAAGTGTATATTTCTTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44860 50 +     87690 -----TTATATTTCTACAATATTAATTTCATTGAAGACTAAGTGTATATTTCTTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208834 50 -    231459 -----TTATATTTCTACAATATTAATTTCATTGAAGACTAAGTGTATATTTCTTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551397 50 + 130588469 -----TTATATTTCTACAGTATTAATTTCATTGAAGACTAAGTGTATATTTCTTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287034 49 + 210400635 -----GTATATTT-TACAATATTAATTTCATTGAAGACTAAATATATCTTTCTTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3757 41 +      4931 ATAGTTAACATTTCTGTAATGTTAATTTT------TAGTAAATGTAT--------
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                   127468 1324 -    169463 I
e otoGar3.GL873640                    4810571  0 -   6509565 I

a score=6152.000000
s hg38.chr14_KI270722v1_random         187107 2 +    194050 GG
s panTro4.chr14_AACZ03171041_random     32815 2 -     37130 GG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401643 2 +  72422247 GG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525728 2 - 229590362 GG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44910 2 +     87690 GG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208884 2 -    231459 GG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551447 2 + 130588469 GG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287083 2 + 210400635 GG
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    49099 2 +    169463 AG
i tarSyr2.KE946707v1                I 2443 I 1029
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e tupBel1.scaffold_67797.1-4931          3798 0 +      4931 C
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873640                    4810571 0 -   6509565 I

a score=41829.000000
s hg38.chr14_KI270722v1_random         187109 20 +    194050 TTTAAGTTATTACATTGTTT
s panTro4.chr14_AACZ03171041_random     32817 20 -     37130 TTTAAGTTATTACATTGTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401645 20 +  72422247 TTTAAATTATTACATTGTTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525730 20 - 229590362 TTTAAATTATTACATTGTTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44912 20 +     87690 TTTAAATTATTACATTGTTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208886 20 -    231459 TTTAAATTATTACATTGTTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551449 20 + 130588469 TTTAAATTTTTACATTGTTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287085 20 + 210400635 TGTAAATTATTAAATTGTTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3798  6 +      4931 ------TTCT--------TT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   433850 224 -    492427 I
e panPan1.JH650567                      20340  0 -     44305 I
e tarSyr2.KE946707v1                    49101 1029 +    169463 I
e otoGar3.GL873640                    4810571  0 -   6509565 I

a score=3321.000000
s hg38.chr14_KI270722v1_random         187129 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     32837 1 -     37130 C
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401665 1 +  72422247 C
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525750 1 - 229590362 C
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44932 1 +     87690 C
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208906 1 -    231459 C
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551469 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   434074 1 -    492427 C
i rhiRox1.KN297764v1                I 224 I 792
s calJac3.chr1                      174287105 1 + 210400635 C
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3804 1 +      4931 C
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    49101 1029 +    169463 I
e otoGar3.GL873640                    4810571 0 -   6509565 I

a score=12548.000000
s hg38.chr14_KI270722v1_random         187130 5 +    194050 -TTTGG
s panTro4.chr14_AACZ03171041_random     32838 5 -     37130 -TTTGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401666 5 +  72422247 -TTTGG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525751 5 - 229590362 -TTTGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44933 5 +     87690 -TTTGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208907 5 -    231459 -TTTGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551470 5 + 130588469 -TTTGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287106 5 + 210400635 -TTTGG
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3805 5 +      4931 TTTTG-
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    49101 1029 +    169463 I
e otoGar3.GL873640                    4810571 0 -   6509565 I

a score=926.000000
s hg38.chr14_KI270722v1_random         187135 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     32843 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225525756 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44938 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208912 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551475 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287111 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1007852 1 -   1077187 A
i otoGar3.GL873804                  I 302 I 476
s tupBel1.scaffold_67797.1-4931          3810 1 +      4931 A
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e ponAbe2.chrUn                      64401671 0 +  72422247 C
e panPan1.JH650567                      20340 0 -     44305 I
e tarSyr2.KE946707v1                    49101 1029 +    169463 I

a score=417324.000000
s hg38.chr14_KI270722v1_random         187136 163 +    194050 -TAAATTAATTGTCCCTAAATCAGTAGGTAATA---CATGTTTTCATTAATCCCAAAATAAATTGTATG---TATCTCTACTAATTAATGTACTTGTGGGTACATTTTCAGTGGCATATTTGTTGTCCCTTATTGAGGCATGAATGACTATTCTGTCACAGGGAGG---TTTT
s panTro4.chr14_AACZ03171041_random     32844 163 -     37130 -TAAATTAATTGTCCCTAAATCAGTAGGTAATA---CATGTTTTCATTAATCCCAAAATAAATTGTATG---TATCTCTACTAATTAATGTACTTGTGGGTACATCTTCAGTGGGATATTTGTTGTCCCTTATTGAGGCATGAATGACTATTCTGTCACAGGGAGG---TTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401671 156 +  72422247 --------ATTGTCTCTTAATCAGTAGGTAATA---CATGTTTTCATTAATCCCAAAATAAATTGTATG---TATCTCTACTAATTAATGTTCTTGTGGGTACATCTTCAGTGGGATATTTGTTGTCTCTTACTGAGGCATGAATGACTATTCTGTCACAGGGAGG---TTTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525757 163 - 229590362 -CAAATTAATTGTTCCTAAATCAGTAGGTAATA---CATGTTTTCATTAATCCAAAAATAAATTGTATG---TATCTCTACTAGTTAATGTAATTGTGGGTACATCTTCAGTGGGATATTTGTTGCCCCTTATTGAGGCATGAATGACTGTTCTGTCACAGGGAGG---TTTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          44939 163 +     87690 -CAAATTAATTGTTCCTAAATCAGTAGGTAATA---CATGTTTTCATTAATCCAAAAATAAATTGTATG---TATCTCTACTAGTTAATGTAATTGTGGGTACATCTTCAGTGGGATATTTGTTGTCCCTTATTGAGGCATGAATGACTGTTCTGTCACAGGGAGG---TTTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     208913 163 -    231459 -CAAATTAATTGTTCCTAAATCAGTAGGTAATA---CATGTTTTCATTAAtccaaaaataaattgtatg---tatCTCTACTAGTTAATGTACTTGTGGGTACATCTTCAGTGGGATATTTGTTGTCCCTTATTGAGGCATGAATGACTGTTCTGTCACAgggagg---tttt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551476 163 + 130588469 -CAAATTAATTGTTCCTAAATCAGTAGGTAATA---CATGTTTTCATTAATCCAAAAATAAGTTGTATG---TATCTCTACTAGTTAATGTACTTGTGGGTACATCTTCGGTGGGATATTTGTTGTCCCTTATTGAGGCATGAATGACTGTTCTGTCACAGGGAGG---TTTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287112 164 + 210400635 -TAAATTAATTGTTCCTAAATAAGTAGGTAATA---TATGTTATCATTAACCCAAAAATAAATTGTTTG---TATCTCTACCAGTTAATGTACTTGTGGGTACATCTTCAGCAGGGTATTTGTT-CCCCTTATTGAGGCATGAATGACTA-TCTGTCACAGGGAGGTTTTTTT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3811 159 +      4931 CAACATTAATAGTTGCTAAATCAGTTTGTAATAATGTATGTTTTCATTAACCCAATAA----TTATATGACCAATCTATATCAATTCATGTAATTG------CATCTTCTGTGG-ATCTTTCTTGTCACATATTGAGGAGTAAAGGACTTTTCTCCCATAGGGACT---TTTT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e panPan1.JH650567                      20340   0 -     44305 I
e tarSyr2.KE946707v1                    49101 1029 +    169463 I
e otoGar3.GL873804                    1007853 476 -   1077187 I

a score=3600.000000
s hg38.chr14_KI270722v1_random         187299 1 +    194050 G
s panTro4.chr14_AACZ03171041_random     33007 1 -     37130 G
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401827 1 +  72422247 G
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525920 1 - 229590362 G
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45102 1 +     87690 G
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209076 1 -    231459 g
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551639 1 + 130588469 G
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287276 1 + 210400635 G
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    50130 1 +    169463 g
i tarSyr2.KE946707v1                I 1029 I 319
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tupBel1.scaffold_67797.1-4931          3970 0 +      4931 C
e panPan1.JH650567                      20340 0 -     44305 I
e otoGar3.GL873804                    1007853 476 -   1077187 I

a score=435306.000000
s hg38.chr14_KI270722v1_random         187300 161 +    194050 TTGTTGTTTTAGTCTTTTCCAGCTATTGTGTAGAGCGTTTTGGGCAAGAGAATCTAGGACCAAGCCACACCGGTTCTCTGCTTTAACCCACTCCATTCGACTGTTCTCCCAGCTATGTTTCCAGAGTGCTCTGTGCATTTCCACAATCAACAAAAGATGAA
s panTro4.chr14_AACZ03171041_random     33008 160 -     37130 TTGTTGTTTTAGTCTTTTCCAGCTATTGTGTAGAGCGTTTTTGGCAAGAGAATCTAGGACCAAGCCACACCGGTTCTCTGC-TTAACCCACTCCATTCGACTGTTCTCCCAGCTATGCTTCCAGAGTGCTCTGTGCATTTCCACGATCAACAAACGATGAA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401828 160 +  72422247 TTGTTGTTTTAGTCTTTTCCAGCTATTGTGCAGAGCGTTTTGGGCAAGAGAATCTAGGACCAAGCCACATCGGTTCTCTGC-TTAACCCACTCCATTCGACTGTTCTCCCAGCTATGCTTCCAGAGTGCTCTGTGCATTTCCACAATCAACAAACGATGAA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225525921 160 - 229590362 TTGTTGTTTTAGTCTTTTCCAGCTATTGTGTAGAGCATTTTGGGCAGGAGAATCTAGGACCAAGCCACACCAGTTCTCTCC-TTAACCCACTCCATTCGACTGTTCTCCCAGCTATGCTTCCAGAGTGCTCTGTGCGTTTCCACAATCAACAAACAGTGAA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45103 160 +     87690 TTGTTGTTTTAGTCTTTTCCAGCTATTGTGTAGAGCATTTTGGGCAGGAGAATCTAGGACAAAGCCACACCAGTTCTCTCC-TTAACCCACTCCATTCGACTGTTCTCCCAGCTATGCTTCCAGAGTGCTCTGTGCGTTTCCACAATCAACAAACAGTGAA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209077 160 -    231459 ttgttgttttagtctTTTCCAGCTATTGTGTAGAGCATTTTGGGCAGGAGAATCTAGGACCAAGCCACACCAGTTCTCTCC-TTAACCCACTCCATTCGACTGTTCTCCCAGCTATGCTTCCAGAGTGCTCTGTGCGTTTCCACAATCAACAAACAGTGAA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551640 160 + 130588469 TTGTTGTTTTAGTCTTTTCCAGCTATTGTGTAGAGCATTTTGGGCAGGAGAATCTAGGACCAAGCCACACCAGTTCTCTCC-TTAACCCACTCCATTCGACTGTTTTCCCAGCTATGCTTCCAGAGTGCTCTGTGCGTTTCCACAATCAACAAACAGTGAA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287277 155 + 210400635 TTGTTGTTTTAGTCTGTTCCAGCTATTGTGTAGAAGGTTTTGGGCAGGAGAATCTAGGACCATGCCACACCAGTTCTC-CC-TTAATCCACTCCATTCGATTTTTCTCCCAGCTATGCTTCCAGAGTGCTCTGTGCGTTTCCAAGATCAACAA----TGAA
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          3970 152 +      4931 --------TTGTTCTTTTCCAGATCATGTGTAGAGAGTTTTGAGCAGAAAAATACAGGACCAAGCTACGCCATTTCTCTCA-TGACTTCACTCCATTCACCTTCTCTCCCAGCTATCTTTCCAGAGCCTTGCATGTGTTTCCAAGAGCAAGAGAAAATGGA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e panPan1.JH650567                      20340   0 -     44305 I
e tarSyr2.KE946707v1                    50131 319 +    169463 I
e otoGar3.GL873804                    1007853 476 -   1077187 I

a score=2997.000000
s hg38.chr14_KI270722v1_random         187461 1 +    194050 C
s panTro4.chr14_AACZ03171041_random     33168 1 -     37130 T
i panTro4.chr14_AACZ03171041_random C 0 C 0
s panPan1.JH650451                    3243870 1 +  10938248 t
i panPan1.JH650451                  I 17058 N 0
s ponAbe2.chrUn                      64401988 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526081 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45263 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209237 1 -    231459 T
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551800 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287432 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          4122 1 +      4931 T
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50131 319 +    169463 I
e otoGar3.GL873804                    1007853 476 -   1077187 I

a score=357439.000000
s hg38.chr14_KI270722v1_random         187462 131 +    194050 AAATCTCTTGTGAGTCATTTGTTTATATATTCCTCTC-TTTGTTTTACATTGTATTTTTTGC-CTTTATGGAGT----CCACGGATTAAAATG-AAAAAATAGAAATAAGTAAAATTCACGTCAAAGGAAATGCACAT
s panTro4.chr14_AACZ03171041_random     33169 131 -     37130 AAATCTCTTGTGAGTCATTTGTTTATATAATCCTCTC-TTTGTTTTACATTGTATTTTTTGC-CTTTATGGAGT----CCACGGATTAAAATG-AAAAAATAGAAATAAGTAAAATTCAGGTTAAAGGAAATGCACAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64401989 135 +  72422247 AAATCTCTGGTGAGTCATTTGTTTATATATTCCTCAC-TTTGTTTTACATTGTATTTTTTGC-CTTTATGGAGTCCACCCACGGATtaaaatg-aaaaaatagaaataagtaaaattcaggttaaaggaaatgcacat
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526082 132 - 229590362 AAATCTCTGGTGAGTTATTTGTTTATATATTCCTCAC-TTTGTTTTACATTGCATTTTTTAC-CTTTATGGAGT----CCATGGATTAAAATGAAAAAAATAGAAATAAGTAAAATTCAGGTTAAAGGAAATGCACAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45264 132 +     87690 AAATCTCTGGTGAGTTATTTGTTTATATATTCCTCAC-TTTGTTTTACATTGCATTTTTTAC-CTTTATGGAGT----CCATGGATTAAAATGAAAAAAATAGAAATAAGTAAAATTCAGGTTAAAGGAAATGCACAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209238 132 -    231459 AAATCTCTGGTgagttatttgtttatatattcctCAC-TTTGTTTTACATTGCATTTTTTAC-CTTTATGGAGT----CCatggattaaaatgaaaaaaatagaaataagtaaaattcaggttaaaggaaatgcacat
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551801 132 + 130588469 AAATCTCTGGTGAGTTATTTGTTTATATATTCCTCAC-TTTGTTTTACATTGCATTTTTTGC-CTTTATGGAGT----CCATGGATTAAAATGAAAAAAATAGAAATAAGTAAAATTCAGGTTAAAGGAAATGCACAT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287433 131 + 210400635 AAATCTCTGGTGAGTTACTTGATTATATATGTCTCAC-TTTGTTTTACATTGCATTTTTTGC-CTTTATGGAGT----CCATGGATTAAAATG-GAAAAATAAAAATAAGTAAAATTCAGGTTAAAGGAAATGCACAT
i calJac3.chr1                      C 0 I 301
s tupBel1.scaffold_67797.1-4931          4123 129 +      4931 AAATGTTTGGTGAGTT----GTTTGTTGATTCCTGACTTTTGTTTTACATTGTATTTTATGAGCTTTATAGGGT----CCATGAGCTAAAATG-GAAAAGCAGAAATAAGTAAAACTGAGCATCAGGGAAATACACAT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50131 319 +    169463 I
e otoGar3.GL873804                    1007853 476 -   1077187 I

a score=107192.000000
s hg38.chr14_KI270722v1_random         187593 39 +    194050 AAATAAAATAATGCTGGCATGTAGACATATGCAGGTTAT
s panTro4.chr14_AACZ03171041_random     33300 39 -     37130 AAATAAAATAATGCTGGCATGTAGACATATGCAGGTTAT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402124 39 +  72422247 aaataaaataatgctggcatgtagacatatgcaggttat
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526214 39 - 229590362 AAATAAAAGAATGCTGGCTTGTAGACATATGCAGGTTGT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45396 39 +     87690 AAATAAAAGAATGCTGGCTTGTAGACATATGCAGGTTGT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209370 39 -    231459 aaataaaagaatgctGGCTTGTAGACATATGCAGGTTGT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551933 39 + 130588469 AAATAAAATATTGCTGGCTTGTAGACATATGCAGGTTAT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287865 39 + 210400635 aaataaaaTAATGCTGGCGTGTAGACatatgcaggttat
i calJac3.chr1                      I 301 C 0
s tupBel1.scaffold_67797.1-4931          4252 39 +      4931 AAGTAAGATAAAGTTGGTATGTAGATAGAGACAGATTAT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50131 319 +    169463 I
e otoGar3.GL873804                    1007853 476 -   1077187 I

a score=4095.000000
s hg38.chr14_KI270722v1_random         187632 1 +    194050 A
s panTro4.chr14_AACZ03171041_random     33339 1 -     37130 A
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402163 1 +  72422247 a
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526253 1 - 229590362 A
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45435 1 +     87690 A
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209409 1 -    231459 A
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551972 1 + 130588469 A
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287904 1 + 210400635 a
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1008329 1 -   1077187 A
i otoGar3.GL873804                  I 476 I 11
s tupBel1.scaffold_67797.1-4931          4291 1 +      4931 A
i tupBel1.scaffold_67797.1-4931     C 0 I 1
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50131 319 +    169463 I

a score=7497.000000
s hg38.chr14_KI270722v1_random         187633 2 +    194050 AG
s panTro4.chr14_AACZ03171041_random     33340 2 -     37130 AG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402164 2 +  72422247 ag
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526254 2 - 229590362 AG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45436 2 +     87690 AG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209410 2 -    231459 AG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551973 2 + 130588469 AG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287905 2 + 210400635 ag
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    50450 2 +    169463 ag
i tarSyr2.KE946707v1                I 319 I 8
s tupBel1.scaffold_67797.1-4931          4293 2 +      4931 GG
i tupBel1.scaffold_67797.1-4931     I 1 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e otoGar3.GL873804                    1008330 11 -   1077187 I

a score=14225.000000
s hg38.chr14_KI270722v1_random         187635 6 +    194050 CCATGG
s panTro4.chr14_AACZ03171041_random     33342 6 -     37130 CCATGG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402166 6 +  72422247 ccatgg
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526256 6 - 229590362 CCATGG
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45438 6 +     87690 CCATGG
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209412 6 -    231459 CCATGG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551975 6 + 130588469 CCATGG
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287907 6 + 210400635 ccattg
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1008341 6 -   1077187 TCGTCT
i otoGar3.GL873804                  I 11 I 57
s tupBel1.scaffold_67797.1-4931          4295 6 +      4931 CCTTCA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50452 8 +    169463 I

a score=6552.000000
s hg38.chr14_KI270722v1_random         187641 2 +    194050 AA
s panTro4.chr14_AACZ03171041_random     33348 2 -     37130 AA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402172 2 +  72422247 aa
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526262 2 - 229590362 AA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45444 2 +     87690 AA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209418 2 -    231459 AA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551981 2 + 130588469 AA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287913 2 + 210400635 aa
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          4301 2 +      4931 AA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50452 8 +    169463 I
e otoGar3.GL873804                    1008347 57 -   1077187 I

a score=-974.000000
s hg38.chr14_KI270722v1_random         187643  4 +    194050 CTGG----------
s panTro4.chr14_AACZ03171041_random     33350  4 -     37130 CTGG----------
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402174  4 +  72422247 cttg----------
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526264  4 - 229590362 CGTG----------
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45446  4 +     87690 CGTG----------
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209420  4 -    231459 CGTG----------
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551983  4 + 130588469 CTTG----------
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287915  4 + 210400635 cttg----------
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    50460  4 +    169463 tcag----------
i tarSyr2.KE946707v1                I 8 I 688
s tupBel1.scaffold_67797.1-4931          4303 13 +      4931 -TTGTCCTAAGTTG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e otoGar3.GL873804                    1008347 57 -   1077187 I

a score=135337.000000
s hg38.chr14_KI270722v1_random         187647 50 +    194050 AGTACAAATGTGTCTCTGGTCTTTCTGATGCTGCAACAAAAAGGCAGTCA
s panTro4.chr14_AACZ03171041_random     33354 50 -     37130 AGTACAAATGTGTCTCTGGTCTTTCTGATGCTGCAACAAAAAGGCAGTCA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402178 50 +  72422247 agtacaaatgtgtctctggtctttctgatgctgcaacaaaaaggcagtta
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526268 50 - 229590362 AGTACAGGTATGTCTCTGGTCTTTCTGATGCTGCAACAACAAGGCAGTCA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45450 50 +     87690 AGTACAGGTATGTCTCTGGTCTTTCTGATGCTGCAACAACAAGGCAGTCA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209424 50 -    231459 AGTACAGGTATGTCTCTGGTCTTTCTGATGCTGCAACAACAAGGCAGTCA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130551987 50 + 130588469 AGTGCAGATATGTCTCTGGTCTTTCTGATGCTGCAACAAAAAGGCAGTCA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287919 50 + 210400635 actacaaatgtgtctctggtctctctgatgttgcatcaaaaaggcagtta
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          4316 49 +      4931 AGTATAAATTTGTCTCTGATGTTTCTGATGCT-TATCAAAAAGACAGGCC
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I
e otoGar3.GL873804                    1008347 57 -   1077187 I

a score=5473.000000
s hg38.chr14_KI270722v1_random         187697 2 +    194050 CG
s panTro4.chr14_AACZ03171041_random     33404 2 -     37130 CA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402228 2 +  72422247 ca
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526318 2 - 229590362 CA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45500 2 +     87690 CA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209474 2 -    231459 CA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552037 2 + 130588469 CA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287969 2 + 210400635 ca
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1008404 2 -   1077187 TG
i otoGar3.GL873804                  I 57 I 519
s tupBel1.scaffold_67797.1-4931          4365 2 +      4931 CA
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I

a score=567574.000000
s hg38.chr14_KI270722v1_random         187699 225 +    194050 TTTGTTACATGATTGGAATGGAACCTGGAAGGAGTGCATGCT-GCATTCTCATGGGACAGGAAGACTTGCTGTCACCAAAGTCTGGAACACTGACTGCATTGGTCACAGAGATGATGTAGTGAAAAGTTTTTTTTACTGCCAA---------CCTGGAAATAAATACTTTTAGCATTTTGCAGTAGAAAGAGTCACTTAGTGCtaaagcataactcccgtaatgaggtttttctg
s panTro4.chr14_AACZ03171041_random     33406 225 -     37130 TTTGTTACATGATTGGAATGGAACCTGGAAGGAGTGCATGCT-GCATTCTCATGGGACAGGAAGACTTGCTGTCACCAAAGTCTGGAACACTGACTACATTGGTCACAGAGATGATGTAGTGAAAAGTTTTTTTTACTGCCGA---------CCTGGAAATAAACACTTTTAGCATTTTGCAGTAGAAATAGTCACTTAGTGCtaaagcataactcccgtaatgaggtttttctg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402230 225 +  72422247 tttgttgcatgattggaatggaacctgtaaggagtgcatgct-gcattcttgtgggacaggaagacttgctgtcaccaaagtctggaacactgactatattggtcacagagatgatgtagtgaaaagttttttttactaccaa---------cctggaaataaacacttttagcattttgcagtagaaacagtcacttagtgctaaagcataactcccgtaatgaggtttttctg
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526320 222 - 229590362 TTTGTTACGTGATTGGAATGGAACCTGGAA--AGTACGCGCT-ACATTCTCGTGGGACGGGAAGACTTGCTGTCACTAAAGTCTGGAACATTGACTGCATTGGTCACAGAGATGATGTAGTGAAAAG-TTTTTTTACTACCAA---------CCTGGAAATAAACACTATTAGCATTTTGCAGTAGAAATAGTCACTTAGTGCtaaagcacaactcccgtaatgaggtttttctg
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45502 222 +     87690 TTTGTTACGTGATTGGAATGGAACCTGGAA--AGTACGCGCT-ACATTCTCGTGGGACGGGAAGACTTGCTGTCACTAAAGTCTGGAACATTGACTGCATTGGTCACAGAGATGATGTAGTGAAAAG-TTTTTTTACTACCAA---------CCTGGAAATAAACACTATTAGCATTTTGCAGTAGAAATAGTCACTtagtgctaaagcacaactcccgtaatgaggtttttctg
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209476 222 -    231459 TTTGTTACGTGATTGGAATGGAACCTGGAA--AGTACGCGCT-ACATTCTCATGGGACGGGAAGACTTGCTGTCACTAAAGTCTGGAACATTGACTGCATTGGTCACAGAGATGATGTAGTGAAAAG-tttttttACTACCAA---------CCTGGAAATAAACACTATTAGCATTTTGCAGTAGAAATAGTCACTTAGTGCTAAAGCACAACTCCCGTAATGAGGTTTTTCTG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552039 222 + 130588469 TTTGTTACGTGATTGGAATGGAAACTGGAA--AGTACGTGCT-ACATTCTCATGGGACGAGAAGACTTGCTGTCACTAAAGTCTGGAACATTGACTGCATTGGTCACAGAGATGATGTAGTGAAAAG-TTTTTTTACTGCCAA---------CCTGGAAATAAACACTATTAGCATTTTGCAGTAGAAATAGTCACTtagtgctaaagcacaactcccgtaatgaggtttttctg
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174287971 223 + 210400635 tttgttacatgattggaatggaacctgcaaagagtgtgtgct-gcattcttgtgagacagaaagacttgctggcaccaaagtctggaacactgacttcattggtcacagagatgacatagtggaaag-tttttttactaccag---------tctggaaatacacacttgtagcatttggcagtagaaatagtcacttagtactaaagcacaactttcatgatgaggtttatct-
i calJac3.chr1                      C 0 I 1
s tupBel1.scaffold_67797.1-4931          4367 226 +      4931 TCTATTCCATGATTGGAGTAGAACCTGAGAAGACAGCATGCTAAAAATCTCATGAGCCATG-AGACTATCTGGCCTCAAATGCTGAAACAT---CTTCATTGGTCACATACATGTTGTAATAGAAAG--TTTTTCACTAAAAAAATAAAAATCCAGGAAATA-ACACTA--AGCATTCAGCAATCGAAATGGTTACCTAGTGCTCAAGTAAAAGTTGCACAATAACATTTTTCTG
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434075 792 -    492427 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I
e otoGar3.GL873804                    1008406 519 -   1077187 I

a score=5164.000000
s hg38.chr14_KI270722v1_random         187924 2 +    194050 ga
s panTro4.chr14_AACZ03171041_random     33631 2 -     37130 ga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402455 2 +  72422247 ga
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526542 2 - 229590362 ga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45724 2 +     87690 ga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209698 2 -    231459 GA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552261 2 + 130588469 ga
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   434867 2 -    492427 ga
i rhiRox1.KN297764v1                I 792 I 878
s tupBel1.scaffold_67797.1-4931          4593 2 +      4931 GT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e calJac3.chr1                      174288194 1 + 210400635 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I
e otoGar3.GL873804                    1008406 519 -   1077187 I

a score=743850.000000
s hg38.chr14_KI270722v1_random         187926 289 +    194050 gttgctaaaactttgcagtcccagacagcttttggaaggccctacttgattcatggctaaaacctagaacatctggaggattgagt-tgaccacagg----tccttaactaac-----------cccccatacgtttctgtcaattcatctatacatggagaatttatagcagattgttcacaattgtattttctgacaaATATGTCCACTATTCACTTGCACTTT----CATTCAGTGTAGTCTTAATTGGTTTATTC-TAATGCTCACCATTAACCTAAATTATATGCAACTCCAATGGCTATTCTCC
s panTro4.chr14_AACZ03171041_random     33633 288 -     37130 gttgctaaaacattgcagtcccagacggcttttggaaggccctacttgattcatggctaaaacctagaatatctggaggattgagt-tgaccacagg----tccttaactaa------------cccccatacgtttctgtcaattcatctatacatggagaatttatagcagattgttcacaattgtattttctgacaaATATTTCCACTGTTCACTTGCACTTT----CATTCAGTGTAGTCTTAATTGGTTTATTC-TAATGCTCACCATTAACCTAAATTATATGCAACTCCAATGGCTATTCTCC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402457 289 +  72422247 gttgctaaaacagtgcagtcccagatggcttttggaaggccctacttgattcatggctaaaacttagaatatctggaggattgagt-tgaccacagg----tccttaactaac-----------cccccatacgtttctgtcaattcatctgtacatggagaatttgtagcagattgttcacaattgtattttctgacaaATATTTCCACTGCTCACTTGCATTTT----CATTCAGTGTAGTCTTAATTGGTTTATTC-TAATGCTCACCATTAACCTAAATTATATGCAACCCCAATGGCTGTTCTGT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526544 289 - 229590362 gttgctgaaacagtgtgatctcagacagcttttggaaggccctacttgattcatggctaaaacctagaacatctggaggattgagt-tgaccacagg----tccttaactaac-----------cccccatatgtttctgtcaattcatctgtacatggagaatttgtagcagattgttcacagttgtattttctgacaaATATTTCCACTGCTCACTTGCGCTTT----CATTCAGTGTAGTCTTAATTCATTTATTC-TGATGCTCACCATTAACCTAAATTATATGCAAATCCATTGGCTATTCTCT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          45726 289 +     87690 gttgctgaaacagtgtgatctcagacagcttttggaaggccctacttgattcatggctaaaacctagaacatctggaggattgagt-tgaccacagg----tccttaactaac-----------cccccatatgtttctgtcaattcatctgtacatggagaatttgtagcagattgttcacagttgtattttctgacaaatatttCCACTGCTCACTTGCGCTTT----CATTCAGTGTAGTCTTAATTCATTTATTC-TGATGCTCACCATTAACCTAAATTATATGCAAATCCATTGGCTATTCTCT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209700 289 -    231459 GTTGCTGAAACTGTGTGATCTCAGACAGCTTTTGGAAGGCCCTACTTGATTCATGGCTAAAACCTAGAACATCTGGAGGATTGAGT-TGACCACAGG----TCCTTAACTAAC-----------CCCCCATAtgtttctgtcaattcatctgtACATGGAGAATTTGTAGCAGATTGTTCACAGTTGTATTTTCTGACAAATATTTCCACTGCTCACTTGCGCTTT----CATTCAGTGTAGTCTTAATTCGTTTATTC-TGATGCTCACCATTAACCTAAATTATATGCAAATCCATTGGCTATTCTCT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552263 289 + 130588469 gttgctgaaacagtgtgatctcagacagcttttggaaggccctacttaattcatggctaaaacctagaacatctggaggattgagt-tgaccacagg----tccttaactaac-----------cccccatatgtttctgtcaattcatctgtacatggaaaatttgtagcagattgttcacaattgtattttctgacaaatatttCCACTGCTCACTTGCGCTTT----CATTCAGTGTAGTCTTAATTCGTTTATTC-TGATGCTCACCATTAACCTAAATCATGTGCAAATCCATTGGCTATTCTCT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288195 294 + 210400635 cttgcaagaacagtgtggtcccagacagcttttggaaggccctgcttgatacatggctaacacctagaacatctggaggattgagt-tgaccacaggtccttccttacataact----------cccccatacatttctgtcggttcatctgtacatacagaatttgtagcagattgttcactattacattttctgacaaATATTTCCACTGCTCACTTGCACTTT----CATTCAATGTAGTCTTCATTGATTTATTT-TAATGCTCACCATTAACCTAAATTATACGCAAATCCAATGGCTATTCTCT
i calJac3.chr1                      I 1 C 0
s tupBel1.scaffold_67797.1-4931          4595 292 +      4931 GTTActaaaatagtgtggtcctaggcaactattagaaggctgtacctgattcacagataaaatctggaatgtctggaggatagaggataaccacagg----tacttaagtaactattaagtaactattcatgcatttccctcagcttctgtataaatgcag--cttaaacagaacttttccaagttataatttctggcaaATATTCTTACTGCCTG-TAACATTTTAATCCACTCAGTGTAGTCTTAGGTCAGTTCTTCAAAAAGTTCTCTAATAATCT-----------AACTCCTATGACTATTCCCT
i tupBel1.scaffold_67797.1-4931     C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I
e otoGar3.GL873804                    1008406 519 -   1077187 I

a score=14166.000000
s hg38.chr14_KI270722v1_random         188215 4 +    194050 AGTC
s panTro4.chr14_AACZ03171041_random     33921 4 -     37130 AGTC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402746 4 +  72422247 AGTC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526833 4 - 229590362 AGTC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46015 4 +     87690 AGTC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209989 4 -    231459 AGTC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552552 4 + 130588469 AGTC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288489 4 + 210400635 GTTC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1008925 4 -   1077187 AGTC
i otoGar3.GL873804                  I 519 I 602
s tupBel1.scaffold_67797.1-4931          4887 4 +      4931 AGTC
i tupBel1.scaffold_67797.1-4931     C 0 I 2
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I

a score=62567.000000
s hg38.chr14_KI270722v1_random         188219 24 +    194050 TGC--CTTACTTGAATCTTATGCCGT
s panTro4.chr14_AACZ03171041_random     33925 24 -     37130 TGC--CTTACTTGAATCTTATGCCGT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402750 24 +  72422247 TGC--CTTACTTGAATCTTGTGCCGT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526837 24 - 229590362 TGC--CTTACTTGAATCTTGTGCCAT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46019 24 +     87690 TGC--CTTACTTGAATCTTGTGCCAT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     209993 24 -    231459 TGC--CTTACATGAATCTTGTGCCAT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552556 24 + 130588469 TGC--CTTACTTGAATCTTGTGCCAT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288493 26 + 210400635 TGCTTTTTACTTGAATCTTGTGGGGT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_67797.1-4931          4893 24 +      4931 TTC--CTTAGTTGAATCTTCTGCCAT
i tupBel1.scaffold_67797.1-4931     I 2 n 2
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=351678.000000
s hg38.chr14_KI270722v1_random         188243 147 +    194050 Acagtaatcccccttatccacagttttgctttctgtggtttcagttccctgtagtcaactgtagacagaaaagacaataagatattttgaatatcttgaatattttatt----------------attttgaatgtgttgaatacagtagaataagatatttt
s panTro4.chr14_AACZ03171041_random     33949 147 -     37130 Acagtaatcccccttatccacagttttgctttctgtggtttcagttccccgtagtcaactgcagacagaaaagacaataagatattttgaatatcttgaatattttgtt----------------attttgaatatgttgaatacagtagaataagatatttt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402774 147 +  72422247 Acagtaatcccccttatccacagttttgctttctgtggtttcagttccccgtagtcaactgcagacagaaaagacaataagatattttgaatatcttgaatattttgat----------------attttgaatatgttgaatacagtagaataagatatttt
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225526861 147 - 229590362 ACAGTTATcccccttatccacagttttgctctctgtggtttcagttacccatagtcaactgcagacagaaaagacaataagatattttgaatatcttgagtattttgat----------------attttgaatatattgaatacagtagaataagatatttt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46043 147 +     87690 ACAGTTATcccccttatccacagttttgctctctgtggtttcagttatccatagtcaactgcagacagaaaagacaaTAAGatattttgaatatcttgagtattttgat----------------attttgaatatattgaatacagtagaataagatatttt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210017 147 -    231459 ACAGTTATCCCCCTTATCCACAGTTTTGCtctctgtggtttcagttacccatagtCAACTGCAGACAGAAAagacaataagatattttgaatatcttgagtattttgat----------------attttgaatatgttgaataCAGtagaataagatatttt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552580 147 + 130588469 ACAGTTATcccccttatccacagtttcgctctctgtggtttcagttacccatagtcaactgcagacagaaaagacaataagatattttgaatatcttgagtattttgat----------------attttgaatatgttgaatatagtagaataagatatttt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288519 163 + 210400635 Acagtaatcccccttattcacagtttcgctttctgtggtttcagttacctgtagtcaactgcagacagaaaatacaataagatattttgaatatcttgaatattttgatatttgatattttgtaaattttgaatatgttgaatatggtagaataagatatttt
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_67797.1-4931          4917   2 +      4931 I
e tarSyr2.KE946707v1                    50464 688 +    169463 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=1176.000000
s hg38.chr14_KI270722v1_random         188390  5 +    194050 -----------g-----------------agag----
s panTro4.chr14_AACZ03171041_random     34096  5 -     37130 -----------g-----------------agag----
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402921  5 +  72422247 -----------g-----------------agag----
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527008  5 - 229590362 -----------g-----------------agag----
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46190  5 +     87690 -----------g-----------------agag----
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210164  5 -    231459 -----------g-----------------agag----
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552727  5 + 130588469 -----------g-----------------agag----
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288682 22 + 210400635 -----------gtgtagtatatgtgatccaaaa----
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    51152 20 +    169463 ggggatgagaag-----------------agagatca
i tarSyr2.KE946707v1                I 688 I 2368
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_67797.1-4931          4917  2 +      4931 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=286160.000000
s hg38.chr14_KI270722v1_random         188395 129 +    194050 accacat-----------tcctataacttttagtatagtatg----------ttgttccattttattgttg---ttaatatcatactgtgcctaatttataaattaaactgtcaagggtatgtatatataggaaaaaacatagtgtatataag
s panTro4.chr14_AACZ03171041_random     34101 129 -     37130 atcacat-----------tcctataacttttagtatagtacg----------ttgttccattttattgttg---ttaatatcatagtgtgcctaatttataaatgaaactgtcaagggtatgtatatatagcaaaaaacatggtatatataag
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64402926 138 +  72422247 accacat-----------tcctataacttttagaatagtatg-ttgttataattgttccattttattgttg---ttaatatcatactgtgcctgatttataaattaaactgtcaagggtatgtatatataagaagaaacatagtgtatataag
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527013 138 - 229590362 accacat-----------tcctataagttttagtatagtata-ttgttataattgttccattttattgttg---ttagtatcatactgtgcctaatttataaattaaactgtcaagggtatgtatctataggaaaaaccatagtgtatataag
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46195 138 +     87690 accacat-----------tcctataagttttagtatagtata-ttgttataattgttgcattttattgttg---ttagtatcatactgtgcctaatttataaattaaactgtcaagggtatgtatctgtaggaaaaaccatagtgtatataag
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210169 138 -    231459 accaCAT-----------TCCTATAAGTTTTAgtatagtata-ttgttataattgttccattttattgttg---ttagtatcatactgtgcctaatttataaattaaactgttAAGGGTATGTATCTATAGGAAAAACCATAGTGTATATAAG
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552732 138 + 130588469 accacat-----------ttctataagttttagtatagtata-ttgttataattgttccattttattgtct---ttagtatcatactgtgcctaatttataaattaaactgtcaagggtatgtatatataggaaaaaccatagtgtatataag
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288704 152 + 210400635 gttatgtgatatagtatatcacataacttttagtatagtatagttgttataattgttccattttattattgtttttaatatcatactgtgcctaattt-taaattaaactgtcaagggtatgtatatataggaaaaaacatagtatatataag
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_67797.1-4931          4917   2 +      4931 I
e tarSyr2.KE946707v1                    51172 2368 +    169463 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=-880.000000
s hg38.chr14_KI270722v1_random         188524 1 +    194050 -g
s panTro4.chr14_AACZ03171041_random     34230 1 -     37130 -g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403064 1 +  72422247 -g
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527151 1 - 229590362 -g
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46333 1 +     87690 -g
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210307 1 -    231459 -G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552870 1 + 130588469 -g
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288856 1 + 210400635 -g
i calJac3.chr1                      C 0 C 0
s micMur1.scaffold_12692                 4249 1 -     24770 t-
i micMur1.scaffold_12692            N 0 N 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_67797.1-4931          4917 2 +      4931 I
e tarSyr2.KE946707v1                    51172 2368 +    169463 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=173300.000000
s hg38.chr14_KI270722v1_random         188525 77 +    194050 tttggtactatacacagtttcacggatctgctaggggacctggaatgtatcccccatggataaagggggactcctgC
s panTro4.chr14_AACZ03171041_random     34231 77 -     37130 tttggtactatacacagtttcagggatctgctaggggacctggaatgtatcccccatggataaagggggactcctgC
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403065 77 +  72422247 tttggtactataaacagtttcagggatctgctaggggacctggaatgtatcccccatggataaggggggattcctgC
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527152 75 - 229590362 tttggtactat--acagtttcagggatctgctaggggacctgcagtgtatcccccgtggataaggggggactcctgC
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46334 75 +     87690 tttggtactat--acagtttcagggatctgctaggggacctgcagtgtatcccccgtggataaggggggactcctgC
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210308 75 -    231459 TTTGGTACTAT--ACAGTTTCAGGGATCTGCTAGGGGACCTGCAGTGTATCCCCCGTGAATAAGGGGGGACTCCTGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552871 75 + 130588469 tttggtactat--acagtttcagggatctgctaggggacctgcagtgtatcccccgtggataaggggggactcctgC
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288857 77 + 210400635 tttggtgctatacatagtttcaggcatccgctaagggacttggaatgtatcccccatggataagggggtgctcctgC
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_67797.1-4931          4917  2 +      4931 I
e tarSyr2.KE946707v1                    51172 2368 +    169463 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=27692.000000
s hg38.chr14_KI270722v1_random         188602 10 +    194050 ATTTCAAATT
s panTro4.chr14_AACZ03171041_random     34308 10 -     37130 ATTTCAAATT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403142 10 +  72422247 ATTTCAAATT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527227 10 - 229590362 ATTTCAAATT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46409 10 +     87690 ATTTCAAATT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210383 10 -    231459 ATTTCAAATT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552946 10 + 130588469 ATTTCAAATT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288934 10 + 210400635 GTTTCACATT
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          4756 10 -      8353 ATTTGAAACT
i tupBel1.scaffold_85531.1-8353     I 3193 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tarSyr2.KE946707v1                    51172 2368 +    169463 I
e otoGar3.GL873804                    1008929 602 -   1077187 I

a score=271260.000000
s hg38.chr14_KI270722v1_random         188612 104 +    194050 ATTGTTCATGA-TCTTCTCCTGGAAA-TCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATGCTGCTTGTC-TTTTTTTCCTGAAT-------TCTTCTA----CTTCTTCTTTACA
s panTro4.chr14_AACZ03171041_random     34318 104 -     37130 ATTGTTCATGA-TCTTCTCCTGGAAA-TCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATGCTGCTTGTC-TTTTTTTCCTGAAT-------TCTTCTA----CTTCTTCTTTACA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403152 105 +  72422247 ATTGTTCATTA-TCTTCTCCTGGAAATTCTTC--------TGTGTTAGTTTCTATC--ATGATCTCACTGATGCTGCTTGTC-TTTTTTTCCTGAAT-------TCTTCTC----CTTCTCCTTTACA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527237 107 - 229590362 ATCGTTCATGATTTTTCTCCTGGAAATTCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATGCTGCTTGTCTTTTTTTTCCTGAAT-------TATTCTC----CTTCTCCTTTACA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46419 107 +     87690 ATCGTTCATGATTTTTCTCCTGGAAATTCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATGCTGCTTGTCTTTTTTTTCCTGAAT-------TATTCTC----CTTCTCCTTTACA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210393 107 -    231459 ATCATTCATGATTTTTCTCCTGGAAATTCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATgctgcttgtcttttttttcctgaat-------tattcTC----CTTCTCCTTTACA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130552956 107 + 130588469 ATCGTTCATGATTTTTCTCCCGGAAATTCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATGCTGCTTGTCTTTTTTTTCCTGAAT-------TATTCTC----CTTCTCCTTTACA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174288944 104 + 210400635 ACTGTTCATGA-CCTTCTCCTGGAAATTCTTC--------TGTGTTAGTTTCTATC--ATGACCTCACTGATGGTGCTTGTC--TCTTTTCCTGAAT-------TCTTCTA----CTTCTCCTTTACA
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873635                     676603  99 -   6899745 actgttcacAA-------GCTGGAAATTCTT-------------TTAGTTTCTACA--GTTAGCTCACTGATTTTTCTTTTCCCTTTTACCCTGAAT-------TCTTCTACCTTCTTCTCCTTAATG
i otoGar3.GL873635                  n 602 C 0
s tupBel1.scaffold_85531.1-8353          4766 123 -      8353 ACAGTTTATGA-TCTTCTTTTGGAAATTCTTCGCTTACCTTCTGTCAAACTCTCTCCAGTGGTTTCTCCTATGACGATTTCTTCTCTGTTTCTTCATATTCTGCTTTTCTC----CTGGTCCCTAACA
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tarSyr2.KE946707v1                    51172 2368 +    169463 I

a score=7823.000000
s hg38.chr14_KI270722v1_random         188716 2 +    194050 TA
s panTro4.chr14_AACZ03171041_random     34422 2 -     37130 TA
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403257 2 +  72422247 TA
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527344 2 - 229590362 TA
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46526 2 +     87690 TA
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210500 2 -    231459 TA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553063 2 + 130588469 TA
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289048 2 + 210400635 TA
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   128792 2 -    169463 TG
i tarSyr2.KE946707v1                I 1324 I 108
s otoGar3.GL873635                     676702 2 -   6899745 TA
i otoGar3.GL873635                  C 0 n 0
s tupBel1.scaffold_85531.1-8353          4889 2 -      8353 TG
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I

a score=124746.000000
s hg38.chr14_KI270722v1_random         188718 52 +    194050 GCTTATCCAATTGTTTCATCCAATTCCCCACCCATCCCACTGTGCAGttctt
s panTro4.chr14_AACZ03171041_random     34424 52 -     37130 GCTTATCCAATTGTTTCATCCAATTCCCCACCCATCCCACTGTGCAGTTCTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403259 46 +  72422247 GCTTATCCAATTGTTTCATCCAATTCCCC------TCCACTGTGCAGTTCTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527346 52 - 229590362 GCTTGTCCAATTGTTTGATCCAATTCCCCATCCATCCCACTGTGCAGTTCtt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46528 52 +     87690 GCTTGTCCAATTGTTTGATCCAATTCCCCATCCATCCCCCTGTGCTGTTCTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210502 52 -    231459 GCTTGTCCAATTGTTTGATCCAAttccccatccatcccactgtgcagttctt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553065 52 + 130588469 ACTTGTCCAATTGTTTGATCCAATTCCCCATCCATCCCACTGTGCAgttctt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289050 52 + 210400635 GCTTATACATGTGTTCCGTCCAATTCCCCATCTATCCCACTGTGCAGttttt
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          4891 52 -      8353 ACTCATCCAAATGCTCCATCCTGGTCTCCATTTCGCTCACTTCACAGTGCTT
i tupBel1.scaffold_85531.1-8353     C 0 I 62
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tarSyr2.KE946707v1                   128794 108 -    169463 I
e otoGar3.GL873635                     676704  0 -   6899745 I

a score=9514.000000
s hg38.chr14_KI270722v1_random         188770 5 +    194050 ttttt
s panTro4.chr14_AACZ03171041_random     34476 5 -     37130 TTTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403305 5 +  72422247 TTTTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527398 5 - 229590362 ttgtt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46580 5 +     87690 TTGTT
i macFas5.chr5_KE145639_random      C 0 M 100
s papAnu2.JH684932                     210554 5 -    231459 ttgtt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553117 5 + 130588469 ttgtt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289102 5 + 210400635 ttttt
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128794 108 -    169463 I
e otoGar3.GL873635                     676704 0 -   6899745 I

a score=14064.000000
s hg38.chr14_KI270722v1_random         188775 15 +    194050 gttgttgtttgtttg
s panTro4.chr14_AACZ03171041_random     34481 15 -     37130 GTTGTTGGTTGTTTG
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403310 15 +  72422247 GTTGTTGGTTGTTCG
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527403 13 - 229590362 gttgttg-ttgttt-
i rheMac3.chr1                      C 0 C 0
s papAnu2.JH684932                     210559 15 -    231459 gttgttgtttgtttg
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553122 15 + 130588469 gttgttgtttgtttg
i chlSab2.chr20                     C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e calJac3.chr1                      174289107  0 + 210400635 C
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128794 108 -    169463 I
e otoGar3.GL873635                     676704  0 -   6899745 I
e macFas5.chr5_KE145639_random          46585 100 +     87690 M

a score=1102.000000
s hg38.chr14_KI270722v1_random         188790 14 +    194050 tttgtttgtttttt
s panTro4.chr14_AACZ03171041_random     34496  4 -     37130 ----------TTTT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403325  2 +  72422247 ------------TT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527416 10 - 229590362 ----tttttttttt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46685 14 +     87690 tttttttttttttt
i macFas5.chr5_KE145639_random      M 100 C 0
s papAnu2.JH684932                     210574  4 -    231459 ----------tttt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553137  3 + 130588469 -----------ttt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289107 10 + 210400635 ----tttttttttt
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   434869 878 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128794 108 -    169463 I
e otoGar3.GL873635                     676704  0 -   6899745 I

a score=6552.000000
s hg38.chr14_KI270722v1_random         188804 2 +    194050 tt
s panTro4.chr14_AACZ03171041_random     34500 2 -     37130 TT
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403327 2 +  72422247 TT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527426 2 - 229590362 tt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46699 2 +     87690 tt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210578 2 -    231459 tt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553140 2 + 130588469 tt
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   435747 2 -    492427 tt
i rhiRox1.KN297764v1                I 878 I 459
s calJac3.chr1                      174289117 2 + 210400635 tt
i calJac3.chr1                      C 0 C 0
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128794 108 -    169463 I
e otoGar3.GL873635                     676704 0 -   6899745 I

a score=124912.000000
s hg38.chr14_KI270722v1_random         188806 55 +    194050 ttACCAGTTCTGCTCTCTGTGGTGTAGCAGTTGTGTTTATCTCCAGCATGGACTT
s panTro4.chr14_AACZ03171041_random     34502 55 -     37130 TTACCAGTTCTGCTCTCTGTGGTGTAGCAGTTGTGTTtatctccagcatggactt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403329 55 +  72422247 TTACCAGTTCTGCTCTCTGTGGTGTAGCAGTTGTGTTTCtctccagcatggactt
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527428 53 - 229590362 ttACCAGTTCTGCTCTC--TGGTGTAGCAGTTGTGTTTCtctccagcttggactt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46701 53 +     87690 ttACCAGTTCTGCTCTC--TGGTGTAGCAGTTGTGTTTCtctccagcttggactt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210580 53 -    231459 ttaccaGTTCTGCTCTC--TGGTGTAGCAGTTGTGTTTCTCTCCAGCTTGGACTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553142 53 + 130588469 ttACCAGTTCTGCTCTC--TGGTGTAGCAGTTGTGTTTCtctccagcttggactt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289119 55 + 210400635 ttAACCGTTCTGCTCTCTGTTGTGTAGCAGTTGTGTTTCTCTCCAGCTTGGACTT
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128794 108 -    169463 I
e otoGar3.GL873635                     676704  0 -   6899745 I

a score=5900.000000
s hg38.chr14_KI270722v1_random         188861 2 +    194050 CT
s panTro4.chr14_AACZ03171041_random     34557 2 -     37130 ct
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403384 2 +  72422247 ct
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527481 2 - 229590362 ct
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          46754 2 +     87690 ct
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210633 2 -    231459 CT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553195 2 + 130588469 ct
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289174 2 + 210400635 CT
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                   128902 2 -    169463 CC
i tarSyr2.KE946707v1                I 108 n 108
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e otoGar3.GL873635                     676704 0 -   6899745 I

a score=595851.000000
s hg38.chr14_KI270722v1_random         188863 263 +    194050 CCGACCTTTAGACcagggatccccaacccccaggccatggaccggt-ccagtctgtggcctgtgaggaactgggctgcacagcaggaagtgaatgtcaggcaagcaaacattactgcctgcactctgcctcctgtcagatgaatggcagcattaaattctcataggagcatgaaccctattgtgaactatgcatgtgagggatttaggttgcctgctccttatgataatctaatgcctgatgaacagcttcatcccaaaaccat
s panTro4.chr14_AACZ03171041_random     34559 263 -     37130 ccgacctttagaccagggatccccaacccccaggccatggaccagt-ccagtctgtggcctgtgaggaactgggctgcacagcaggaagtgagtggcaggcaagcaagcattactgcctgcactctgcctcttgtcagatgaatggcagcattaaattctcataggagcatgaaccgtattgtgaactatgcatgtgagggatctaggttgcctgctccttatgataatctaatgcctgatgaacagcttcatcccaaaaccat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403386 263 +  72422247 ccggactttagaccagggatccccaacccccaggccatggaccggt-ccagtctgtggcctgtgaggaactgggctgcacggcaggagatgagtggcaggcaagcaagcattactgcctgcactctgcctcctctcagatgaatgacagcattaaattctcataggagcaggaaccctattgtgaactatgcatgtgagggatctaggttgcctgctccttatgagaatctaatgcctgattaatagcttcatcccaaaaccat
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527483 259 - 229590362 ccagcctttagaccagggatcccc-atccccaggccatgaactggtaccagtctgtgacctgtgaggaactgggctgcacagcagg---tgagtggcaggcaagcaagaattactgcctgtgctctgcctcctgtcagatgaatgacaccattaaattctcataggagcatgaaccctaatgtgaactatgcatgtgagggatctaggttccctgctccttatgagaatctaatgcctgacgaaccgtttcat-ccaaaaccat
i rheMac3.chr1                      C 0 I 1
s macFas5.chr5_KE145639_random          46756 259 +     87690 ccagcctttagaccagggatcccc-atccccaggccatgaactggtaccagtctgtgacctgtgaggaactgggctgcacagcagg---tgagtggcaggcaagcaagaattactgcctgtgctctgcctcctgtcagatgaatgacaccattaaattctcataggagcatgaaccctaatgtgaactatgcatgtgagggatctaggttccctgctccttatgagaatctaatgcctgacgaaccgtttcat-ccaaaaccat
i macFas5.chr5_KE145639_random      C 0 I 8
s papAnu2.JH684932                     210635 259 -    231459 CCAGCCTTTAGACCAGGGATCCCC-ATCCCCAGGCCATgaactggtaccagtctgtgACCTGtgaggaactgggctgcacagcagg---tgagtggcaggcaagcaAGAATTACTGCCtgtgctctgcctcctgtcagatgaaTGACagcattaaattctcataggagcatgaaccctaatgtgaactatgcatgtgagggatctaggttccctgctccttatgagaatctaatgcctgacgaACCGTTTCAT-CCAAAACCAT
i papAnu2.JH684932                  C 0 I 8
s chlSab2.chr20                     130553197 261 + 130588469 ccagcctttagaccagggatccccaacccccaggccatgaactggtaccagtctgtgacctgtgaggaactgggctgcacagcagg---tgagtggcaggcaagcaagcattactgcctgtgctctgcctcctgtcagatgaatgacagcattaaattctcataggagcatgaaccctaatgtgaactatgcatgtgagggatctaggttccctgctccttatgagaatctaatgcctgatgaaccgtttcatcccaaaaccat
i chlSab2.chr20                     C 0 I 1
s calJac3.chr1                      174289176 264 + 210400635 CCAGCCTTCAGACcaggggtctccaacccccaggccatggactggtaccagtctgtggcctgttaggaactgtactgcatagcaggaggtgagtggcagatgagcaagcattactgcctgagctctgcctcctgtcaaatgaatgggggcattagattctcatagaagcatgaaccctattgtgaactatgcatgtgagggatctaggttgcctgctccttatgagaatctaatgcctgatgaacagtttcatcccaaaaccat
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943  62 -      8353 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I
e otoGar3.GL873635                     676704   0 -   6899745 I

a score=300.000000
s hg38.chr14_KI270722v1_random         189126 1 +    194050 c
s panTro4.chr14_AACZ03171041_random     34822 1 -     37130 c
i panTro4.chr14_AACZ03171041_random C 0 C 0
s calJac3.chr1                      174289440 1 + 210400635 c
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e ponAbe2.chrUn                      64403649 0 +  72422247 C
e tarSyr2.KE946707v1                   128904 108 -    169463 I
e otoGar3.GL873635                     676704 0 -   6899745 I
e chlSab2.chr20                     130553458 1 + 130588469 I
e papAnu2.JH684932                     210894 8 -    231459 I
e macFas5.chr5_KE145639_random          47015 8 +     87690 I
e rheMac3.chr1                      225527742 1 - 229590362 I

a score=1490.000000
s hg38.chr14_KI270722v1_random         189127 5 +    194050 ccccc
s panTro4.chr14_AACZ03171041_random     34823 5 -     37130 ccccc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403649 5 +  72422247 ccccc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527743 1 - 229590362 ----t
i rheMac3.chr1                      I 1 I 6
s chlSab2.chr20                     130553459 1 + 130588469 ----t
i chlSab2.chr20                     I 1 I 6
s calJac3.chr1                      174289441 5 + 210400635 ccctc
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I
e otoGar3.GL873635                     676704 0 -   6899745 I
e papAnu2.JH684932                     210894 8 -    231459 I
e macFas5.chr5_KE145639_random          47015 8 +     87690 I

a score=96605.000000
s hg38.chr14_KI270722v1_random         189132 40 +    194050 tcacaccctggtatatggaaaaa--atttttcacaaaacctg
s panTro4.chr14_AACZ03171041_random     34828 42 -     37130 tcacaccctggtatatggaaaaattgtgtttcacaaaacctg
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403654 42 +  72422247 tcacaccctggtatatggaaaaattgtctttcacaaaacctg
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527750 42 - 229590362 tcacaccctggtatatggaaaaatggtctttcacaaaacctg
i rheMac3.chr1                      I 6 C 0
s macFas5.chr5_KE145639_random          47023 42 +     87690 tcacaccctggtatatggaaaaatggtctttcacaaaacctg
i macFas5.chr5_KE145639_random      I 8 C 0
s papAnu2.JH684932                     210902 42 -    231459 TCACACCCTGGtatatggaaaaattgtctttcacaaaacctg
i papAnu2.JH684932                  I 8 C 0
s chlSab2.chr20                     130553466 42 + 130588469 tcacaccctggtatatggaaaaattgtctttcacaaaacctg
i chlSab2.chr20                     I 6 C 0
s calJac3.chr1                      174289446 42 + 210400635 tcacaccctggtctctggaaaaattgtcttccacaaaatctg
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I
e otoGar3.GL873635                     676704  0 -   6899745 I

a score=67889.000000
s hg38.chr14_KI270722v1_random         189172 26 +    194050 gtgccaaaaaggttgggtatcactgC
s panTro4.chr14_AACZ03171041_random     34870 25 -     37130 gtgccaaaaa-tttggggatcactgc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403696 26 +  72422247 gtgccaaaaaggttggggatcactgc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527792 26 - 229590362 gtgccaaaaaggttggggatcgctgc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          47065 26 +     87690 gtgccaaaaaggttggggatcgctgc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210944 26 -    231459 gtgccaaaaaggttagggatCGCTGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553508 26 + 130588469 gtgccaaaaaggttggggatcgctgc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289488 26 + 210400635 gtgccaaaaaggttggggattactgC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1009531 26 -   1077187 gtgacccagaggttgagaactgctgc
i otoGar3.GL873804                  I 602 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tupBel1.scaffold_85531.1-8353          4943 62 -      8353 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=187957.000000
s hg38.chr14_KI270722v1_random         189198 67 +    194050 TCTA---------------------GACCACAGGTTCAACTCTCCATTAAATGATTCTTTGTAGCTATCCGAAAGGCACTTCAAGCTT
s panTro4.chr14_AACZ03171041_random     34895 67 -     37130 tcta---------------------gacaacaggttcaactctccattaaatgattctttgtagctatccgaaaggcacctcaagctt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403722 67 +  72422247 tcta---------------------gaccacaggttcaactctccattgaatgattctttgtagctatccggaaggcacctcaagctt
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527818 67 - 229590362 tcta---------------------gatcacaggttcaactctccattgaatgattctttgtagctatctgaaaggcacctcaggctt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          47091 67 +     87690 tcta---------------------gatcacaggttcaactctccattgaatgattctttgtagctatctgaaaggcacctcaggctt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     210970 67 -    231459 TCTA---------------------GATCACAGGTTCAACTCTCCATTGAATGATTCTTTGTAGCTATCTGAAAGGCACCTCAGGCTT
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553534 67 + 130588469 tcta---------------------gaccacaggttcaactctccattgaatgattctttgtagctatctgaaaggcacctcaagctt
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289514 67 + 210400635 TGTA---------------------GGCCACAGGTTCAACTCTCCATTGAATGCTTCTTTGTAGCTATCCAAAAGGCACCTCAAGCTT
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1009557 86 -   1077187 tCTAGGGCTTCTTCCCCAGGCTTTTGACCATGGTTTCAGTTCT--GTTAAACGCTTCCCTATGGCTATTTAAGAGGGACCACAAGTTA
i otoGar3.GL873804                  C 0 C 0
s tupBel1.scaffold_85531.1-8353          5005 51 -      8353 TCTA---------------------GTTTGTCGGTTCAACTCTCTGTTGAGTGCTTCATTGTA----------------CTCAAACCC
i tupBel1.scaffold_85531.1-8353     I 62 C 0
e rhiRox1.KN297764v1                   435749 459 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=15510.000000
s hg38.chr14_KI270722v1_random         189265 3 +    194050 AAC
s panTro4.chr14_AACZ03171041_random     34962 3 -     37130 aac
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403789 3 +  72422247 aac
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527885 3 - 229590362 aac
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          47158 3 +     87690 aac
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     211037 3 -    231459 aac
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553601 3 + 130588469 aac
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   436208 3 -    492427 AAC
i rhiRox1.KN297764v1                I 459 I 252
s calJac3.chr1                      174289581 3 + 210400635 AAC
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1009643 3 -   1077187 AAC
i otoGar3.GL873804                  C 0 C 0
s tupBel1.scaffold_85531.1-8353          5056 3 -      8353 AAC
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=101992.000000
s hg38.chr14_KI270722v1_random         189268 36 +    194050 AAATCTAAAATAAAA-TTACAACCT-----TCTCTCTTCCTT
s panTro4.chr14_AACZ03171041_random     34965 36 -     37130 aaatccaaaataaaa-ttacatcct-----tctctcttcctt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403792 36 +  72422247 aaatccaaaataaaa-ttacatcct-----tctctctTCCTT
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527888 37 - 229590362 aaatccaaaataaaagttacatcct-----tctctctTCCTT
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          47161 37 +     87690 aaatccaaaataaaagttacatcct-----tctctctTCCTT
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     211040 37 -    231459 aaatccaaaataaaagttacatcct-----tctctcttcctt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553604 37 + 130588469 aaatccaaaataaaagttacatcct-----tctctctTCCTT
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289584 37 + 210400635 AAATCTGAAATAAAAACTATTTCCT-----TCTCTCTTCCTG
i calJac3.chr1                      C 0 C 0
s otoGar3.GL873804                    1009646 37 -   1077187 AAATTAAAAATGAAAAGCTCATCCT-----CCCATCTTATTT
i otoGar3.GL873804                  C 0 N 0
s tupBel1.scaffold_85531.1-8353          5059 42 -      8353 ACATCCAAGACGAAAAGCACATCCTCCCCCTCCCTCTTCCTC
i tupBel1.scaffold_85531.1-8353     C 0 C 0
e rhiRox1.KN297764v1                   436211 252 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=3276.000000
s hg38.chr14_KI270722v1_random         189304 1 +    194050 T
s panTro4.chr14_AACZ03171041_random     35001 1 -     37130 t
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403828 1 +  72422247 T
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527925 1 - 229590362 T
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          47198 1 +     87690 T
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     211077 1 -    231459 t
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553641 1 + 130588469 T
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289621 1 + 210400635 T
i calJac3.chr1                      C 0 C 0
s tupBel1.scaffold_85531.1-8353          5101 1 -      8353 T
i tupBel1.scaffold_85531.1-8353     C 0 N 0
e rhiRox1.KN297764v1                   436211 252 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=491312.000000
s hg38.chr14_KI270722v1_random         189305 221 +    194050 ACACACGGTTTTAGATTACAGAGTAATTAGCTTCTACCTCTCAATAAAAGGAATAGTGAGAATCTGTAGCAGTCTTTAATAAACCACagttttccctctggctacaaattatttacattcctcccacatgcaaaatatacttaccTGTAGAGGTAAgtattcacccatggaactgtcaccacaaacagtgcaataaacaacttttgcctccacgaaattct
s panTro4.chr14_AACZ03171041_random     35002 221 -     37130 acacacggttttAGAGTAGAGAGTAATTAGCTTCTACCTCTCAATAAGAGGAATAGTGAGAATCTGTAGCAGTCTTTAATAAACCACagttttccctctggctaaaaattatttacattcctcccacatgcaaaatatacttaccTGTAGAGGTAAgtattcacccatggaactgtcaccacaaacagtgcaataaacaacttttgcctccacgaatttct
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64403829 221 +  72422247 ACACACGGTATTAGATTAGAGACTAATTAGCTTCTACCTCTCAATAAGAGGAATAGTGAGAATCTGTAGCAGTCTTTAATAAAACACagttttccctcgggctacaaattatttacattccttccacatgcaaaatatacctaccTGtagagataagtattcacccatggaaccgtcaccacaaacagtgcgataaacaacctttgcctccacgagtttct
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225527926 214 - 229590362 ACATACGGTATTAGATTAGAGAGTAATTAGCTTCTACCTTTCAATAAGAGGAGTAGTGAGAATCTGTAGCAGTCTTTAGTAAAC--CagttttccctctggctacaaattatttacattcctcccatgtgcaaaatatacttaccTGTA-----AAgtattcacccatggaaccatcaccacaaacagtgcgataaacaacctttgcctccatgagtttct
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          47199 214 +     87690 ACATACGGTATTAGATTAGAGAGTAATTAGCTTCTACCTTTCAATAAGAGGAGTAGTGAGAATCTGTAGCAGTCTTTAGTAAAC--CagttttccctctggctacaaattatttacattcctcccatgtgcaaaatatacttaccTGTA-----AAgtattcacccatggaaccatcaccacaaacagtgcgataaacaacctttgcctccatgagtttct
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     211078 214 -    231459 acaTACGGTATTAGATTAGAGAGTAATTAGCTTCTACCTTTCTATAAGAGGAGTAGTGAGAATCTGTAGCAGTCTTTAGTAAAC--CAGTTTTCCCTCTGGCTACAAATTATTTACATTCCTCCCATGTGCAAAATATACTTACCTGTA-----AAGTTTTCACCCATGGAACCATCACCACAAACAGTGCGATAAACAACCTTTGCCTCCATGAGTTtct
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130553642 214 + 130588469 ACATAGGGTATTAGATTAGAGAGTAATTAGCTTCTACCTTTCAATAAGAGGGATAGTGAGAATCTGTAGCAGTCTTTAGTAAAC--CagttttccctctggctataaattatttacattcctcccatgtgcaaaatatacttaGCTGTA-----AAgtattcgcccatggaaccatcaccacaaacagtgcgataaacaacctttgcctacatgagtttct
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174289622 221 + 210400635 ACATATGTTATTAGATTAgagagtaattagattctacctctcaataagaggaatagtaagaatctgtagcagtctttaataaaccacagtttttcccctggccacaaattatttacattcctctcacatgcaaaatatgcttaccTGtagagataagtattcacccatggaaccatcagtacaaacaatgcaataaacaacctttgcctccacaagtttct
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436211 252 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=8307.000000
s hg38.chr14_KI270722v1_random         189526 3 +    194050 ccc
s panTro4.chr14_AACZ03171041_random     35223 3 -     37130 ccc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64404050 3 +  72422247 ccc
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225528140 3 - 229590362 tCC
i rheMac3.chr1                      C 0 I 2
s macFas5.chr5_KE145639_random          47413 3 +     87690 tCC
i macFas5.chr5_KE145639_random      C 0 I 2
s papAnu2.JH684932                     211292 3 -    231459 tcc
i papAnu2.JH684932                  C 0 I 2
s chlSab2.chr20                     130553856 3 + 130588469 tcc
i chlSab2.chr20                     C 0 I 2
s rhiRox1.KN297764v1                   436463 3 -    492427 tcc
i rhiRox1.KN297764v1                I 252 I 1627
s calJac3.chr1                      174289843 3 + 210400635 tcc
i calJac3.chr1                      C 0 C 0
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=232946.000000
s hg38.chr14_KI270722v1_random         189529 115 +    194050 -tccccccctccccgccccttttgggatgcaaccatttgacataacatatattctctgcataagtccgttctctcattgctataaaaaactacctcggactgggtaatttataaa-a
s panTro4.chr14_AACZ03171041_random     35226 113 -     37130 -tccccc---ccacgccccttttgggatacagccatttgacataacatatattttctgtataagtccgttctcccattgctgtaaaaaactacctcggactgggtaatttataaaga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64404053 113 +  72422247 -cctgct---ccctgccccttttgggatacaaccatttgacataagatatattctctgtataagtctgttctcccattgctataaaaaactacctgggactgggtaatttataaaga
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225528145 111 - 229590362 -CCCCCT---CCCCGCCCCTTTTGGGATACAACCATTTGAGATAAGATACATTCTCtgtataagtccgttctgccattgctat-aaaaactacctgggactgggtaatttataaag-
i rheMac3.chr1                      I 2 I 1
s macFas5.chr5_KE145639_random          47418 111 +     87690 -CCCCCT---CCCCGCCCCTTTTGGGATACAACCATTTGAGATAAGATACATTCTCtgtataagtccgttctgccattgctat-aaaaactacctgggactgggtaatttataaag-
i macFas5.chr5_KE145639_random      I 2 I 135
s papAnu2.JH684932                     211297 112 -    231459 -ccccct---ccccgcccctttTGGGATACAACCATTTGAGATAAGATACAGTCTCTGTATAAGTCCGTTCTCCcattgctataaaaaactacctgggactgggtaatttataaag-
i papAnu2.JH684932                  I 2 I 1
s chlSab2.chr20                     130553861 112 + 130588469 -cccact---ccccaccccttttgggatacaaccatttgacataagatacattctctgtataagtctgttctcccattgctataaaaaactacctgggactgggtaatttataaag-
i chlSab2.chr20                     I 2 I 1
s calJac3.chr1                      174289846 114 + 210400635 tcccctc---tcctgccccttttgggatataaccatttgacataagttacattctctgtattggtccattctcccattgatataaagaactatctgagactgggtaatttataaaga
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=99643.000000
s hg38.chr14_KI270722v1_random         189644 46 +    194050 aaagtggattaattggctcacagttccacaggctgtacaggaagca
s panTro4.chr14_AACZ03171041_random     35339 46 -     37130 aaagcagtttaattggctcacagttccacaggctgtacaggaagca
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64404166 46 +  72422247 aaagaggtttaattgactcacaattccacaggctgtacaggaagca
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225528257 46 - 229590362 gaagcggtttaattggctgacagttccacaggctgtacaggaagca
i rheMac3.chr1                      I 1 I 130
s macFas5.chr5_KE145639_random          47664 46 +     87690 aaagaggtttaattggctgacagttccacaggctgtacaggaagcg
i macFas5.chr5_KE145639_random      I 135 C 0
s papAnu2.JH684932                     211410 46 -    231459 aaagaggtttaattggcggacagttccacaggctgtacaggaagca
i papAnu2.JH684932                  I 1 I 135
s chlSab2.chr20                     130553974 46 + 130588469 gaagaggtttaattggctgacagttccacaggctgtacaggaagcg
i chlSab2.chr20                     I 1 C 0
s calJac3.chr1                      174289960 44 + 210400635 aaagaggtttaattggttcatagttccataggctgt--aggaagca
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=657542.000000
s hg38.chr14_KI270722v1_random         189690 287 +    194050 tggttggggaggcctcaggaaacttacagttatggtgtaagatgaaggggaagcaggcacgttctatgtatctggagca----gaagtgagtggtgaaaggggaggtgctgtacaccttt-aacaaccagatctcatgagaatttactaacacgagaacagcaaggggcaagtctgcccct-tgatccagtcacctcccaccaggcccctcct----ccagccttgaggcttagaatttgac-atgagatttgggcaagtaaacagattgaaaccataccatcctcttaacaaatttt
s panTro4.chr14_AACZ03171041_random     35385 291 -     37130 tggctggggaggcctcaggaaacttacagttatggtgtaagatgaaggggaagcaggcacgttctatgtgtctggagcagaaggaagtgagtggtgaagggggaggtgcagtacaccttt-aacaaccagatctcatgagaatttactaacacgagaacagcaaggggcaagtctgccccc-ttatccagtcacctcccaccaggcccctcct----ccagccttgaggcttacaatttgac-gtgagatttgggcaagtaaacagattgaaaccatagcatcctcttaacaaatttt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64404212 295 +  72422247 tggctggggaggcctcaggaaacttacagttatggtgtaagatgaaggggaagcaggcacgtcctatgtgtctggagcaggaggaagtgggtggtgaaggggaaggtggtgtacactttt-aacaaccagacctcatgaaaatttactaacacgagaacagcaaggggcaagtctgccccc-tgatccagtcacctcccaccagacccctcctccagccagccttgaggcttacaatttgac-atgagatttgggcaagtaaacaaatcgaaacaataccatcctcttaacacatttt
i ponAbe2.chrUn                     C 0 C 0
s rheMac3.chr1                      225528433 291 - 229590362 tggctggggaggcctcaggagacttacagtcctggtgtaggatgaaggggaagcaggcacgtcctctgtgtctggagcaggaggaagtgggtggtgaagggggaggtgctgtacactttt-aacaaccagatctcatgagaatttactgtcacaagaacagcaaggggcaagtctgccccc-tgatccagtcacctcccaccaggccccacct----ccagccttgaggcttacaattggac-atgagctttgtacaagtaaacaaatcgaaaccataccaTcctcttaacagatttt
i rheMac3.chr1                      I 130 C 0
s macFas5.chr5_KE145639_random          47710 291 +     87690 tggctggggaggcctcaggagacttacagtcgtggtgtaggatgaaggggaagcaggcacgtcctctgtgtctggagcaggaggaagtgggtggtgaagggggaggtgctgtacactttt-aacaaccagatctcatgagaatttactgtcacaagaacagcaaggggcaagtctgccccc-tgatccagtcacctcccaccaggccccacct----ccagccttgaggcttacaattggac-atgagctttgtacaagtaaacaaatcgaaaccataccaTcctcttaacagatttt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     211591 290 -    231459 tggctggggaggccttaggagaCTTACAGTTGTGGTGTaggatgaaggggaagcaggcacgtcctCTGtgtctggagcaggaggaagtgggtggtgaagggggaggtgctgtacactttt-aacaaccagatctcatgagaatttactatcacaagaacagcaaggggcaAGTCTGCCCcc--gatccagtcacctcccaccaggccccacct----ccagccttgAGGCTTACAACTGGAC-ATGAGCTTTGGACAAGTAAACAAATCGAAACCATACCATcctcttaacagatttt
i papAnu2.JH684932                  I 135 C 0
s chlSab2.chr20                     130554020 291 + 130588469 tggctggggaggcctcagtagacttacagtcgtggtgtaggatgaaggggaagcaggcacgtcctctgtgtctggagcaggaggaagtgggtggtgaagggggaggtgctgtacactttt-aacaaccagatctcatgagaatttactatcacaagaacagcaaggggcaagtctgcctcc-tgatccagtcacctcccaccaggccccacct----ccagccttgaggcttacagtttgac-atgagctttggacaaataaacacatcgaaaccataccatcctcttaacaaatttt
i chlSab2.chr20                     C 0 I 305
s calJac3.chr1                      174290004 293 + 210400635 tggctggggatgccccaggaaacttaaaatcgtggtgtaagatgaaggggaagcagccatgccctatgtgtctgcagcaggaggaagtgggtggtcaagggggaggtgctgtacacttttaaacaacgagatctcctgagaatttactatcacaagaacagc-aggggcaagtctgcccccatgatccagtcacctcccaccaggtcccttct----ccaaccttgaggcttacaatttgataatgagatgtgggcaagtacacaaatccaaagcataccatcctcttaacaaaattt
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=402405.000000
s hg38.chr14_KI270722v1_random         189977 187 +    194050 taaatatgcaattccgtattaactacatgctttgatctgtagattccatatttagaacttactcattgcat-aactaaaacttatactctgtgacaaatacctccccagttacccttccctctcagcccttggtaaccacgattcagctctatgtctttgtaagtttaactgttttacatttttatat
s panTro4.chr14_AACZ03171041_random     35676 178 -     37130 taaatatgcaattccgtattaactacattctttgatctgtagattccat---------ttactcattgcat-aactaaaacttatactctgtgacaaatacctccccagttacccttccctctcagcccttggtaaccatgattcagctctatgtctttgtaagtttaactgttttccttttttatat
i panTro4.chr14_AACZ03171041_random C 0 C 0
s ponAbe2.chrUn                      64404507 187 +  72422247 taagtatgcaattccgtattaactatatgctttgatctgtagattcgatatttagaacttactcattgcat-aactaaaacttataccctgtgaccaatacttccccagttacccttccccatcagcccttggtaaccatgattcagctctaggcttttgtaagtttaactgttttacatTTTTATAT
i ponAbe2.chrUn                     C 0 I 1986
s rheMac3.chr1                      225528724 187 - 229590362 taagtatggaattcagtattagctacatgcattggtctgtagatttgatatttagaacttactcgttgcat-aactaaaacttataccctgtgaccaatacctccccagttacccttccccctcagcccttggtaaccacgattcagctctatgtttttgtaagtttaactgtttcacatttttatgt
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          48001 187 +     87690 taagtatggaattcagtattagctacatgcattggtctgtagatttgatatttagaacttactcgttgcat-aactaaaacttataccctgtgaccaatacctccccagttacccttccccctcagcccttggtaaccacgattcagctctatgtttttgtaagtttaactgtttcacatttttatgt
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     211881 187 -    231459 taagtATGCAATTCAGTATTAGCTACATGCGTTGGTCTGTAGATTTGATATTTAGAACTTACTCGTTGCAT-AACTAAAACTTATACCCTGTGACCAATACCTCCCCAGTTACCCTTCCCCCTCAGCCCTTGGTAACCACGATTCAGCTCTATGTTTTTGTAAGTTTAActgtttcacatttttatgt
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130554616 187 + 130588469 taagtatgcaattcagtattaactacatgtgttggtctgtagatttgatatttagaacttactcattgcat-aactaaaacttacaccctgtgaccagtacctccccagttacccttccccctcagcccttggtaaccacgattcagctctatgtttttgtaagtttaactgtttcacatttttatgt
i chlSab2.chr20                     I 305 C 0
s calJac3.chr1                      174290297 171 + 210400635 taagta-----------------tacatgcattggtctgtggattcgatatttagaattcactcattgcataaactaaaacttatatcctgtaaccaataccttcccacttacccttccccctcagaccttggtaaccaccattcagctctgtgtttttataagtttaaccgttttatatttttattt
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=1206434.000000
s hg38.chr14_KI270722v1_random         190164 702 +    194050  
s panTro4.chr14_AACZ03171041_random     35854 703 -     37130  
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225528911 711 - 229590362  
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          48188 711 +     87690  
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     212068 711 -    231459  
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130554803 707 + 130588469  
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174290468 717 + 210400635  
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I
e tarSyr2.KE946707v1                   128904 108 -    169463 I

a score=2800.000000
s hg38.chr14_KI270722v1_random         190866 1 +    194050 g
s panTro4.chr14_AACZ03171041_random     36557 1 -     37130 g
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225529622 1 - 229590362 g
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          48899 1 +     87690 g
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     212779 1 -    231459 G
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555510 1 + 130588469 g
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174291185 1 + 210400635 g
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    53540 1 +    169463 g
i tarSyr2.KE946707v1                I 2368 I 246
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I

a score=452804.000000
s hg38.chr14_KI270722v1_random         190867 274 +    194050 tagccttcgcccttttcaaaacctccccccaccata--gtagtacctttgttaaaatgaggaacctacattgagacatcacagttgtccaaaggccatagtttacattagggtttactcttgtggttttacatgctatgggtttgagtaaatgtat----aatgacatgtatccagtcttatagtacctcacagaaca----ctttgttctaaaagtcatccctgctcttcctgtttattactcatcatcctcctaaccctgcaaaccatctccatcattttgc
s panTro4.chr14_AACZ03171041_random     36558 274 -     37130 tagccttcgcccttttcaacacctccccccaccata--gtagtacctttgttaaaatgaggaacctacattgagacatcatagttgtccaaaggccatagtttacattagggtttactcttgtggttttacatgctatgggtttgagtaaatgtat----aatgacatgtatccagccttatagtacctcacagaaca----ctttgttctaaaagtcatccctgctcttcctgtttattactcatcatcctcctaaccctgcaaaccatctccatcattttgc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225529623 275 - 229590362 tagccttcgcccttttcaacacctccgtccaccata--gtagtacatttgttaaaatgaggaacctacactgagacatcatagttgtccaaaggccatagtttgcattagggtttactcttatggttttacatgctatgggtttgagtaaa-gttt----aatgacatgtatccagccttacagtaccccacaggacactttctttgttctaaaagccatccctgctcttcctgtttattgtttatcatc--cctaaccttgcaaaccatctccatcattttgc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          48900 275 +     87690 tagccttcgcccttttcaacacctccgcccaccata--gtagtacatttgttaaaatgaggaacctacactgagacatcatagttgtccaaaggccatagtttgcattagggtttactcttgtggttttacatgctatgggtttgagtaaa-gttt----aatgacatgtatccagccttacagtaccccacaggacactttctttgttctaaaagccatccctgctcttcctgtttattgtttatcatc--cctaaccttgcaaaccatctccatcattttgc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     212780 277 -    231459 TAGCCTTCGCCCTTTTCAACACCTCCGCCCACCATAGTGtagtacatttgttaaaatgagGAACCTACACTGAGACATCATAGTTGTCCAAGGGCCATAGTTTGCATTAGGGTTTACTCTTGTGGTTTTACATGCTATGGGTTTGAGTAAA-GTTT----AATGACATGTATCCAGCCTTACAGTACCCCACAGGACACTTTCTTTGTTCTAAAAGCCATCCCTGCTCTTCCTGTTTATTGTTTATCATC--CCTAACCTTGCAAACCATCTCCATCATTTTGC
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555511 275 + 130588469 tagccttcgcccttttcaacacctccctccaccata--gtagtacatttgttaaaatgaggaacctacactgagacatcatagttgtccaaaggccatagtttacattagggtttactcttgtggttttacatgctatgggtttgagtaaa-gttt----aatgacatgtatccagccttgcagtaccccacaggacactttctttgttctaaaagccatccctgctcttcctgtttattatttatcatc--cctaaccttgcaaaccatcttcatcattttgc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174291186 264 + 210400635 tagccttcacccatttcagtacctcccctcaccata--gtggtacatttattaaaatgaggagcctacattgagacatcatagttgtccaaaggccgtaatttatattagggcttactcttgcggttttacattctatgagttt-agcaaatgtataaggaaggacatgtatccagcctgatagtacctcatagaatacttcccttgttgtaaaagtcatccctgctcttatt---------------cc--cttaaccctgcaaaccatctccagcattttgc
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   436466 1627 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I
e tarSyr2.KE946707v1                    53541 246 +    169463 I

a score=10152.000000
s hg38.chr14_KI270722v1_random         191141 3 +    194050 aga
s panTro4.chr14_AACZ03171041_random     36832 3 -     37130 aga
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225529898 3 - 229590362 aga
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          49175 3 +     87690 aga
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     213057 3 -    231459 AGA
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555786 3 + 130588469 aga
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   438093 3 -    492427 aga
i rhiRox1.KN297764v1                I 1627 I 82
s calJac3.chr1                      174291450 3 + 210400635 aga
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    53787 3 +    169463 aga
i tarSyr2.KE946707v1                I 246 I 76
e ponAbe2.chrUn                      64404694 1986 +  72422247 I

a score=112284.000000
s hg38.chr14_KI270722v1_random         191144 68 +    194050 atgttacatagttgcagttatatagtaagtagcattttcagactgccttattttacttagtaatatgc
s panTro4.chr14_AACZ03171041_random     36835 68 -     37130 atattacatagttgcagttatatagtaagtagcattttccgactgccttcttttacttagtaatatgc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225529901 68 - 229590362 atgttacatagttgcagttatatagtaagtagccttttcagactgccttcttttacttagtaatatgc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          49178 68 +     87690 atgttacatagttgcagttatatagtaagtagccttttcagactgccttcttttacttagtaatatgc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     213060 68 -    231459 ATGTTACATAGTTGCAGTTATATAGTaagtagccttttcagactgccttcttttacttagtaatatgc
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555789 68 + 130588469 atgttacacagttgcagttacatggtaagtagccttttcagactgccttcttttacttagtaatatgc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174291453 64 + 210400635 atgttaaatagttgcagttatac----agtagccttttccgaccagcttcttctacttagaaataggc
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   438096 82 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I
e tarSyr2.KE946707v1                    53790 76 +    169463 I

a score=11886.000000
s hg38.chr14_KI270722v1_random         191212 5 +    194050 attta
s panTro4.chr14_AACZ03171041_random     36903 5 -     37130 attta
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225529969 5 - 229590362 attta
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          49246 5 +     87690 attta
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     213128 5 -    231459 attta
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555857 5 + 130588469 attta
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174291517 5 + 210400635 attta
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    53866 5 +    169463 actta
i tarSyr2.KE946707v1                I 76 I 17
e rhiRox1.KN297764v1                   438096 82 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I

a score=12168.000000
s hg38.chr14_KI270722v1_random         191217 9 +    194050 aggttcctc
s panTro4.chr14_AACZ03171041_random     36908 9 -     37130 aggttcctc
i panTro4.chr14_AACZ03171041_random C 0 C 0
s rheMac3.chr1                      225529974 9 - 229590362 aggttcctc
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          49251 9 +     87690 aggttcctc
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     213133 9 -    231459 aggttcctc
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555862 9 + 130588469 aggttcctc
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174291522 7 + 210400635 aggtatc--
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   438096 82 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I
e tarSyr2.KE946707v1                    53871 17 +    169463 I

a score=3160.000000
s hg38.chr14_KI270722v1_random         191226 3 +    194050 ctt
s panTro4.chr14_AACZ03171041_random     36917 3 -     37130 ctt
i panTro4.chr14_AACZ03171041_random C 0 C 0
s chlSab2.chr20                     130555871 3 + 130588469 ctt
i chlSab2.chr20                     C 0 C 0
s rhiRox1.KN297764v1                   438178 3 -    492427 ctt
i rhiRox1.KN297764v1                I 82 I 251
s calJac3.chr1                      174291529 3 + 210400635 ctt
i calJac3.chr1                      C 0 C 0
s tarSyr2.KE946707v1                    53888 3 +    169463 cat
i tarSyr2.KE946707v1                I 17 I 255
e ponAbe2.chrUn                      64404694 1986 +  72422247 I
e papAnu2.JH684932                     213142 0 -    231459 C
e macFas5.chr5_KE145639_random          49260 0 +     87690 C
e rheMac3.chr1                      225529983 0 - 229590362 C

a score=367845.000000
s hg38.chr14_KI270722v1_random         191229 209 +    194050 atcttttgaggacaagatagcccatttctttttagtgctgaattatgttccattgtgtgtaccatagtttattcattcacttactgaaggacatcttggttgcttccaaattttagttattttgaataaagctgctataaatttctgtttacaggtttttatgctagtgtttattgtcacctcctttgggtaaataccaagaggtgcag
s panTro4.chr14_AACZ03171041_random     36920 209 -     37130 atcttttgaggacaagatagcccatttctttttagtgctgaattatgttccattgtgtgtaccatagtttcttcattcacttactgaagggcatcttggttgcttccaaattttagttattttgaataaagctgctataaatttctgtttataggtttttatgctagcatttattgtcacctcctttgggtaaataccaagaggtgCAG
i panTro4.chr14_AACZ03171041_random C 0 N 0
s rheMac3.chr1                      225529983 207 - 229590362 --cttttgaggacaagatagcccatttctttttagtgctgaattatgttccattatgtataccatagtttatccattcacttactcaagggcatcttggttgcttccaaattttagctattttgaataaagctgctataaatccctgtttacaggtttttatgctagcatttattttcacctcctttgggtaaataccaagaggtgcag
i rheMac3.chr1                      C 0 C 0
s macFas5.chr5_KE145639_random          49260 207 +     87690 --cttttgaggacaagatagcccatttctttttagtgctgaattatgttccattatgtataccatagtttatccattcacttactcaagggcatcttggttgcttccaaattttagctattttgaataaagctgctataaatccctgtttacaggtttttatgctagcatttattttcacctcctttgggtaaataccaagaggtgcag
i macFas5.chr5_KE145639_random      C 0 C 0
s papAnu2.JH684932                     213142 207 -    231459 --cttTTGAGGACAAGATAgcccatttctttttagtgctgaattaTGTTCCATTCTGTATACCATAGTTTATCCATTCCCTTACTcaagggcatcttggttgcttccaaattttagctattttgaataaagctgctataaatccCTGTTTACAGGTTTTTATGCTAGCATTTATTTTCacctcctttgggtaaataccaagaggtgcag
i papAnu2.JH684932                  C 0 C 0
s chlSab2.chr20                     130555874 208 + 130588469 atcttttgaggacaagatagcccatttctttttagtgctgaattatgttccattgtgtataccgtagtttatccattcatttactgaagggcatcttggttgcttccaaattttagctattttgaataaagctgctataaa-ccctgtttacaggtttttatgctagcatttattttcacctcctttgggtaaataccaagaggtgcag
i chlSab2.chr20                     C 0 C 0
s calJac3.chr1                      174291532 209 + 210400635 accttttcaggacaagatagcccatttccttttaatgctgaattatatttcattgtgtgtaccatagtttttctattcacttactgaagggcattttggctacttccagattttaattattttgaataaagttgctataaatacctgtttgcaggtttttatgctgtcattaattttcacctcctttgggtaaataccaaggagtgcag
i calJac3.chr1                      C 0 C 0
e rhiRox1.KN297764v1                   438181 251 -    492427 I
e ponAbe2.chrUn                      64404694 1986 +  72422247 I
e tarSyr2.KE946707v1                    53891 255 +    169463 I

a score=54627.000000
s hg38.chr14_KI270722v1_random    191438 42 +    194050 ttgctggatcatatggtaagaatatgtttacttttgtaagaa
s rheMac3.chr1                 225530190 42 - 229590362 ttgctggatcatatggtaagaatgtgtttaattttgtaagaa
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     49467 42 +     87690 ttgctggatcatatggtaagaatgtgtttaattttgtaagaa
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                213349 42 -    231459 ttgctggatcatatggtaagaatgTGTTTACTTTTGTAAGAA
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130556082 42 + 130588469 ttgctggatcatatggtaagaatgtgtttacttttgtaagaa
i chlSab2.chr20                C 0 C 0
s calJac3.chr1                 174291741 42 + 210400635 ctgctgtatcatatggtaagaatatgtttacttttgtaagaa
i calJac3.chr1                 C 0 C 0
e rhiRox1.KN297764v1              438181 251 -    492427 I
e ponAbe2.chrUn                 64404694 1986 +  72422247 I
e tarSyr2.KE946707v1               53891 255 +    169463 I

a score=9198.000000
s hg38.chr14_KI270722v1_random    191480 4 +    194050 caac
s rheMac3.chr1                 225530232 4 - 229590362 caac
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     49509 4 +     87690 caac
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                213391 4 -    231459 CAAC
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130556124 4 + 130588469 caac
i chlSab2.chr20                C 0 C 0
s rhiRox1.KN297764v1              438432 4 -    492427 caac
i rhiRox1.KN297764v1           I 251 N 0
s calJac3.chr1                 174291783 4 + 210400635 caac
i calJac3.chr1                 C 0 C 0
s tarSyr2.KE946707v1               54146 4 +    169463 ctac
i tarSyr2.KE946707v1           I 255 N 0
e ponAbe2.chrUn                 64404694 1986 +  72422247 I

a score=334375.000000
s hg38.chr14_KI270722v1_random    191484 289 +    194050 caaattgtccgccaactgagtgactgtaccattttgcatttccacaat--ctgaatgagagttcctgttgctctgcattctcactgtcagttgttgtcagtgctctttattatggccattctactaggtatgtagcggtatc--------tcattgttttaatatgttaccctaatgttacacaatataatgcattcttttatatgtttatttcctatatgtttctcatcattggtgaggtatctgttaaggtttttggtctattttattaggtggttttcttactgtagagttttaag
s rheMac3.chr1                 225530236 297 - 229590362 caaattgtcctccaacttagtgactatactattttgcatttccacact--gtgaaggagagttcctgttgctccacattctcactgtcagttgttgtcagtgctccaaattttggccattctactagatatgtagcggtatctcggtatttcattgttttaatatattaccctaatgttgcagaatatactgcattcttttatgtgtttatttcctgtatgtttctcatcattggtgaggtatctgttaaggtctttggtctgttttatttagtggttttcttactgtagaggtttcag
i rheMac3.chr1                 C 0 C 0
s macFas5.chr5_KE145639_random     49513 297 +     87690 caaattgtcctccaacttagtgactatactattttgcatttccacact--gtgaaggagagttcctgttgctccacattctcactgtcagttgttgtcagtgctccaaattttggccattctactagatatgtagcggtatctcggtatttcattgttttaatatattaccctaatgttgcagaatatactgcattcttttatgtgtttatttcctgtatgtttctcatcattggtgaggtatctgttaaggtctttggtctgttttatttagtggttttcttactgtagaggtttcag
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                213395 297 -    231459 CAAATTGTCCTCCAACTGAGTGACTATACTATTTTGCATTTGCACACT--GTGAAGGagaattcctgttgctccacattctcactgTCAGTTGTTGTCAGTGCTCCAAATTTTGGCCATTCTACTAGATATGTAGCGGTATCTCGGTATTTCGTTGTTTTAATATGTTACCCTAATGTTACAGAATATACTGCattcttttatgtgtttatttcctGTATGTTTCTCATCATTGGTGAGGtatctgttaaggtctttggtcTGTTTTATTTAGTGGTTTTCTTACTGTAGAGGTTTCAG
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130556128 297 + 130588469 caaattgtcctccaactgagtgactatactattttgcatttccacact--ctgaaggagagttcctgttgctccacattctcactgtcagttgttgtcagtgctccaaattttggccattctactaggtatctagcggtatctcggtatctcgttgttttaatatgttaccctaatgttacataatatactgcattgttttatgtgtttatttcctgtatgtttctcatcattggtgaggtacctgttaaggtctttggtctgttttatttagtggttttcttactgtagaggtttcag
i chlSab2.chr20                C 0 C 0
s calJac3.chr1                 174291787 266 + 210400635 taaattgttttcca---gagtgacgatactattttgcatttccactattagtgaatgagagttcct-ttactccacattctcactgccag------------------attttggccattctactaagttcgtagcggtatc-----------ttgttttaatatattatcctaatgttatacaatataatgtaaccttttatatgtttatttcctatatgtttctcatcattgatgaggtgtctgttaaggtctttggtctgttttatttggtagttttcttactatagagttttaag
i calJac3.chr1                 C 0 N 0
e ponAbe2.chrUn                 64404694 1986 +  72422247 I

a score=16085.000000
s hg38.chr14_KI270722v1_random    191773 34 +    194050 agtttttggagtattttatgtgacagccttttta
s rheMac3.chr1                 225530533 34 - 229590362 tgtttttggaatgttttgtgtaacagtctcttta
i rheMac3.chr1                 C 0 N 0
s macFas5.chr5_KE145639_random     49810 34 +     87690 tgtttttggaatgttttgtgtaacagtctcttta
i macFas5.chr5_KE145639_random C 0 C 0
s papAnu2.JH684932                213692 12 -    231459 TGTTTTTGGAAT----------------------
i papAnu2.JH684932             C 0 C 0
s chlSab2.chr20                130556425 34 + 130588469 tgtttttggaatgttttgtgtaacagtctcttta
i chlSab2.chr20                C 0 N 0
e ponAbe2.chrUn                 64404694 1986 +  72422247 I

a score=288.000000
s hg38.chr14_KI270722v1_random   191807 15 +   194050 tc-agatgtgagtttt
s macFas5.chr5_KE145639_random    49844 16 +    87690 ccaagatatgtctttt
i macFas5.chr5_KE145639_random C 0 N 0
e ponAbe2.chrUn                64404694 1986 + 72422247 I
e papAnu2.JH684932               213704  0 -   231459 C

a score=0.000000
s hg38.chr14_KI270722v1_random   191822 14 +   194050 AAGAGTTTTTGGAT
e ponAbe2.chrUn                64404694 1986 + 72422247 I
e papAnu2.JH684932               213704  0 -   231459 C

a score=7125.000000
s hg38.chr14_KI270722v1_random   191836 31 +   194050 TGTTTTGTGTAACAGTCTCTTTATC-AGATGt
s ponAbe2.chrUn                64406680 31 + 72422247 TGTTTTGTGTAACAGTCTCTTTATC-AGATGT
i ponAbe2.chrUn                I 1986 I 24
s papAnu2.JH684932               213704 31 -   231459 -GTTTTGTGTAACAGTCTCTTTACCAAGATAT
i papAnu2.JH684932             C 0 C 0

a score=216.000000
s hg38.chr14_KI270722v1_random   191867 7 +   194050 gagtttt
s papAnu2.JH684932               213735 7 -   231459 gtctttt
i papAnu2.JH684932             C 0 N 0
e ponAbe2.chrUn                64406711 24 + 72422247 I

a score=0.000000
s hg38.chr14_KI270722v1_random   191874 13 +   194050 aagagtttttgta
e ponAbe2.chrUn                64406711 24 + 72422247 I

a score=14553.000000
s hg38.chr14_KI270722v1_random   191887 180 +   194050 atgttttgtgtaacagtctctttctcagatgtTTTGTATAACAGTCTCTTTCTCAGATGTTTTGTGTAACAGTCTCTTTATCAGATGTTTTGTATAACAG--TCTTTCTCAGAAGTTTTGTAGAACGGTCTCTTTCTCAGATGTTTTGTGTA--AGTCtctttatcagatgttttgtagaacag
s ponAbe2.chrUn                64406735 184 + 72422247 ATGTTTTGTGTAACAGTCTCTTTCTCAGATGTTTTGTGTAACAGTCTCTTTCTCAGATGTTTTGTGTAAGAGTCTCTTTCTCAGATGTTTTGTGTAACAGTCTCTTTCTCAGATGTTTTGTAGAACAGTCTCTTTCTCAGAAGTTTTGTGTAACAGTCTCTTTATCAGATGTTTTGTATAACAG
i ponAbe2.chrUn                I 24 I 293

a score=15730.000000
s hg38.chr14_KI270722v1_random   192067 185 +   194050 tccctttctcaggtgtgtcttttgcaaatattttctcccaatctgtggcttttcttctcattttcatgacattggcttttgcagaacagaagttttcaattttaatgaagtcttgtttatgaatcattttaaaatggatcttgacattggtgttatatctaaaaagtcattacctttcccaggat
s ponAbe2.chrUn                64407212 185 + 72422247 tctctttctcagatgtgtcttttgcagatatttcctccaaatctgtggcttttcttctcatttttgtgacattggcttttgcagaacagaagttttcaattttaatgaagtcttgtttatgaatcattttaaaatggatcttgacattgttattatatctaaaaagtcatttcctctcccaggat
i ponAbe2.chrUn                I 293 N 0

