# Assembly name: ASM63385v1 # Organism name: Candida tropicalis (budding yeasts & others) # Infraspecific name: strain=121 # Taxid: 5482 # BioSample: SAMN02650963 # BioProject: PRJNA238598 # Submitter: Nanjing Tech University # Date: 2014-05-01 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JGYC01 # Assembly method: SOAPdenovo v. 1.05 # Genome coverage: 50.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_000633855.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000633865.1 Primary Assembly ## GCA_000633875.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold14 unplaced-scaffold na na JGYC01000138.1 <> na Primary Assembly 405284 na Scaffold24 unplaced-scaffold na na JGYC01000192.1 <> na Primary Assembly 195009 na Scaffold32 unplaced-scaffold na na JGYC01000214.1 <> na Primary Assembly 18053 na Scaffold34 unplaced-scaffold na na JGYC01000218.1 <> na Primary Assembly 14369 na Scaffold35 unplaced-scaffold na na JGYC01000219.1 <> na Primary Assembly 12304 na Scaffold41 unplaced-scaffold na na JGYC01000230.1 <> na Primary Assembly 10769 na Scaffold46 unplaced-scaffold na na JGYC01000239.1 <> na Primary Assembly 9087 na Scaffold49 unplaced-scaffold na na JGYC01000244.1 <> na Primary Assembly 8638 na Scaffold50 unplaced-scaffold na na JGYC01000245.1 <> na Primary Assembly 7670 na Scaffold52 unplaced-scaffold na na JGYC01000248.1 <> na Primary Assembly 7606 na Scaffold57 unplaced-scaffold na na JGYC01000257.1 <> na Primary Assembly 6943 na Scaffold58 unplaced-scaffold na na JGYC01000258.1 <> na Primary Assembly 6425 na Scaffold59 unplaced-scaffold na na JGYC01000259.1 <> na Primary Assembly 5727 na Scaffold60 unplaced-scaffold na na JGYC01000260.1 <> na Primary Assembly 4920 na Scaffold61 unplaced-scaffold na na JGYC01000261.1 <> na Primary Assembly 4674 na Scaffold62 unplaced-scaffold na na JGYC01000262.1 <> na Primary Assembly 4463 na Scaffold63 unplaced-scaffold na na JGYC01000263.1 <> na Primary Assembly 4251 na Scaffold64 unplaced-scaffold na na JGYC01000264.1 <> na Primary Assembly 4019 na Scaffold65 unplaced-scaffold na na JGYC01000265.1 <> na Primary Assembly 3904 na Scaffold66 unplaced-scaffold na na JGYC01000266.1 <> na Primary Assembly 3610 na Scaffold67 unplaced-scaffold na na JGYC01000267.1 <> na Primary Assembly 3419 na Scaffold68 unplaced-scaffold na na JGYC01000268.1 <> na Primary Assembly 3406 na Scaffold69 unplaced-scaffold na na JGYC01000269.1 <> na Primary Assembly 3254 na Scaffold70 unplaced-scaffold na na JGYC01000270.1 <> na Primary Assembly 3225 na Scaffold71 unplaced-scaffold na na JGYC01000271.1 <> na Primary Assembly 2983 na Scaffold72 unplaced-scaffold na na JGYC01000272.1 <> na Primary Assembly 2960 na Scaffold73 unplaced-scaffold na na JGYC01000273.1 <> na Primary Assembly 2943 na Scaffold74 unplaced-scaffold na na JGYC01000274.1 <> na Primary Assembly 2732 na Scaffold75 unplaced-scaffold na na JGYC01000275.1 <> na Primary Assembly 2526 na Scaffold76 unplaced-scaffold na na JGYC01000276.1 <> na Primary Assembly 2521 na Scaffold77 unplaced-scaffold na na JGYC01000277.1 <> na Primary Assembly 2499 na Scaffold79 unplaced-scaffold na na JGYC01000278.1 <> na Primary Assembly 2376 na Scaffold80 unplaced-scaffold na na JGYC01000279.1 <> na Primary Assembly 2285 na Scaffold81 unplaced-scaffold na na JGYC01000280.1 <> na Primary Assembly 2266 na Scaffold82 unplaced-scaffold na na JGYC01000281.1 <> na Primary Assembly 2205 na Scaffold83 unplaced-scaffold na na JGYC01000282.1 <> na Primary Assembly 2129 na Scaffold84 unplaced-scaffold na na JGYC01000283.1 <> na Primary Assembly 2080 na Scaffold85 unplaced-scaffold na na JGYC01000284.1 <> na Primary Assembly 2045 na Scaffold86 unplaced-scaffold na na JGYC01000285.1 <> na Primary Assembly 2024 na Scaffold87 unplaced-scaffold na na JGYC01000286.1 <> na Primary Assembly 1965 na Scaffold88 unplaced-scaffold na na JGYC01000287.1 <> na Primary Assembly 1929 na Scaffold89 unplaced-scaffold na na JGYC01000288.1 <> na Primary Assembly 1844 na Scaffold90 unplaced-scaffold na na JGYC01000289.1 <> na Primary Assembly 1776 na Scaffold91 unplaced-scaffold na na JGYC01000290.1 <> na Primary Assembly 1716 na Scaffold92 unplaced-scaffold na na JGYC01000291.1 <> na Primary Assembly 1671 na Scaffold93 unplaced-scaffold na na JGYC01000292.1 <> na Primary Assembly 1633 na Scaffold94 unplaced-scaffold na na JGYC01000293.1 <> na Primary Assembly 1602 na Scaffold95 unplaced-scaffold na na JGYC01000294.1 <> na Primary Assembly 1600 na Scaffold96 unplaced-scaffold na na JGYC01000295.1 <> na Primary Assembly 1566 na Scaffold97 unplaced-scaffold na na JGYC01000296.1 <> na Primary Assembly 1565 na Scaffold98 unplaced-scaffold na na JGYC01000297.1 <> na Primary Assembly 1557 na Scaffold99 unplaced-scaffold na na JGYC01000298.1 <> na Primary Assembly 1542 na Scaffold100 unplaced-scaffold na na JGYC01000299.1 <> na Primary Assembly 1507 na Scaffold101 unplaced-scaffold na na JGYC01000300.1 <> na Primary Assembly 1493 na Scaffold103 unplaced-scaffold na na JGYC01000303.1 <> na Primary Assembly 1467 na Scaffold104 unplaced-scaffold na na JGYC01000304.1 <> na Primary Assembly 1424 na Scaffold105 unplaced-scaffold na na JGYC01000305.1 <> na Primary Assembly 1421 na Scaffold106 unplaced-scaffold na na JGYC01000306.1 <> na Primary Assembly 1414 na Scaffold107 unplaced-scaffold na na JGYC01000307.1 <> na Primary Assembly 1392 na Scaffold108 unplaced-scaffold na na JGYC01000308.1 <> na Primary Assembly 1379 na Scaffold109 unplaced-scaffold na na JGYC01000309.1 <> na Primary Assembly 1376 na Scaffold110 unplaced-scaffold na na JGYC01000310.1 <> na Primary Assembly 1376 na Scaffold111 unplaced-scaffold na na JGYC01000311.1 <> na Primary Assembly 1357 na Scaffold112 unplaced-scaffold na na JGYC01000312.1 <> na Primary Assembly 1355 na Scaffold113 unplaced-scaffold na na JGYC01000313.1 <> na Primary Assembly 1353 na Scaffold114 unplaced-scaffold na na JGYC01000314.1 <> na Primary Assembly 1345 na Scaffold115 unplaced-scaffold na na JGYC01000315.1 <> na Primary Assembly 1314 na Scaffold116 unplaced-scaffold na na JGYC01000316.1 <> na Primary Assembly 1291 na Scaffold117 unplaced-scaffold na na JGYC01000317.1 <> na Primary Assembly 1285 na Scaffold118 unplaced-scaffold na na JGYC01000318.1 <> na Primary Assembly 1274 na Scaffold119 unplaced-scaffold na na JGYC01000319.1 <> na Primary Assembly 1267 na Scaffold120 unplaced-scaffold na na JGYC01000320.1 <> na Primary Assembly 1259 na Scaffold121 unplaced-scaffold na na JGYC01000321.1 <> na Primary Assembly 1256 na Scaffold122 unplaced-scaffold na na JGYC01000322.1 <> na Primary Assembly 1243 na Scaffold123 unplaced-scaffold na na JGYC01000323.1 <> na Primary Assembly 1233 na Scaffold124 unplaced-scaffold na na JGYC01000324.1 <> na Primary Assembly 1225 na Scaffold125 unplaced-scaffold na na JGYC01000325.1 <> na Primary Assembly 1199 na Scaffold126 unplaced-scaffold na na JGYC01000326.1 <> na Primary Assembly 1188 na Scaffold127 unplaced-scaffold na na JGYC01000327.1 <> na Primary Assembly 1176 na Scaffold128 unplaced-scaffold na na JGYC01000328.1 <> na Primary Assembly 1172 na Scaffold129 unplaced-scaffold na na JGYC01000329.1 <> na Primary Assembly 1165 na Scaffold130 unplaced-scaffold na na JGYC01000330.1 <> na Primary Assembly 1159 na Scaffold131 unplaced-scaffold na na JGYC01000331.1 <> na Primary Assembly 1152 na Scaffold132 unplaced-scaffold na na JGYC01000332.1 <> na Primary Assembly 1120 na Scaffold133 unplaced-scaffold na na JGYC01000333.1 <> na Primary Assembly 1119 na Scaffold134 unplaced-scaffold na na JGYC01000334.1 <> na Primary Assembly 1112 na Scaffold135 unplaced-scaffold na na JGYC01000335.1 <> na Primary Assembly 1098 na Scaffold136 unplaced-scaffold na na JGYC01000336.1 <> na Primary Assembly 1097 na Scaffold137 unplaced-scaffold na na JGYC01000337.1 <> na Primary Assembly 1068 na Scaffold138 unplaced-scaffold na na JGYC01000338.1 <> na Primary Assembly 1063 na Scaffold139 unplaced-scaffold na na JGYC01000339.1 <> na Primary Assembly 1055 na Scaffold140 unplaced-scaffold na na JGYC01000340.1 <> na Primary Assembly 1053 na Scaffold141 unplaced-scaffold na na JGYC01000341.1 <> na Primary Assembly 1048 na Scaffold142 unplaced-scaffold na na JGYC01000342.1 <> na Primary Assembly 1047 na Scaffold143 unplaced-scaffold na na JGYC01000343.1 <> na Primary Assembly 1044 na Scaffold144 unplaced-scaffold na na JGYC01000344.1 <> na Primary Assembly 1041 na Scaffold145 unplaced-scaffold na na JGYC01000345.1 <> na Primary Assembly 1034 na Scaffold146 unplaced-scaffold na na JGYC01000346.1 <> na Primary Assembly 1021 na Scaffold147 unplaced-scaffold na na JGYC01000347.1 <> na Primary Assembly 1018 na Scaffold148 unplaced-scaffold na na JGYC01000348.1 <> na Primary Assembly 1014 na Scaffold149 unplaced-scaffold na na JGYC01000349.1 <> na Primary Assembly 1003 na Scaffold150 unplaced-scaffold na na JGYC01000350.1 <> na Primary Assembly 1001 na Scaffold1 unplaced-scaffold na na KK214768.1 <> na Primary Assembly 2377843 na Scaffold2 unplaced-scaffold na na KK214769.1 <> na Primary Assembly 1666313 na Scaffold3 unplaced-scaffold na na KK214770.1 <> na Primary Assembly 1232947 na Scaffold4 unplaced-scaffold na na KK214771.1 <> na Primary Assembly 1068684 na Scaffold5 unplaced-scaffold na na KK214772.1 <> na Primary Assembly 745199 na Scaffold6 unplaced-scaffold na na KK214773.1 <> na Primary Assembly 647514 na Scaffold7 unplaced-scaffold na na KK214774.1 <> na Primary Assembly 605763 na Scaffold8 unplaced-scaffold na na KK214775.1 <> na Primary Assembly 551501 na Scaffold9 unplaced-scaffold na na KK214776.1 <> na Primary Assembly 511967 na Scaffold10 unplaced-scaffold na na KK214777.1 <> na Primary Assembly 486286 na Scaffold11 unplaced-scaffold na na KK214778.1 <> na Primary Assembly 485753 na Scaffold12 unplaced-scaffold na na KK214779.1 <> na Primary Assembly 444027 na Scaffold13 unplaced-scaffold na na KK214780.1 <> na Primary Assembly 412516 na Scaffold15 unplaced-scaffold na na KK214781.1 <> na Primary Assembly 349700 na Scaffold16 unplaced-scaffold na na KK214782.1 <> na Primary Assembly 329187 na Scaffold17 unplaced-scaffold na na KK214783.1 <> na Primary Assembly 322565 na Scaffold18 unplaced-scaffold na na KK214784.1 <> na Primary Assembly 322073 na Scaffold19 unplaced-scaffold na na KK214785.1 <> na Primary Assembly 282139 na Scaffold20 unplaced-scaffold na na KK214786.1 <> na Primary Assembly 248543 na Scaffold21 unplaced-scaffold na na KK214787.1 <> na Primary Assembly 244291 na Scaffold22 unplaced-scaffold na na KK214788.1 <> na Primary Assembly 238992 na Scaffold23 unplaced-scaffold na na KK214789.1 <> na Primary Assembly 231601 na Scaffold25 unplaced-scaffold na na KK214790.1 <> na Primary Assembly 146979 na Scaffold26 unplaced-scaffold na na KK214791.1 <> na Primary Assembly 76928 na Scaffold27 unplaced-scaffold na na KK214792.1 <> na Primary Assembly 65905 na Scaffold28 unplaced-scaffold na na KK214793.1 <> na Primary Assembly 63772 na Scaffold29 unplaced-scaffold na na KK214794.1 <> na Primary Assembly 62124 na Scaffold31 unplaced-scaffold na na KK214795.1 <> na Primary Assembly 20532 na Scaffold33 unplaced-scaffold na na KK214796.1 <> na Primary Assembly 17979 na Scaffold36 unplaced-scaffold na na KK214797.1 <> na Primary Assembly 12166 na Scaffold37 unplaced-scaffold na na KK214798.1 <> na Primary Assembly 12070 na Scaffold38 unplaced-scaffold na na KK214799.1 <> na Primary Assembly 11941 na Scaffold39 unplaced-scaffold na na KK214800.1 <> na Primary Assembly 11847 na Scaffold40 unplaced-scaffold na na KK214801.1 <> na Primary Assembly 11106 na Scaffold42 unplaced-scaffold na na KK214802.1 <> na Primary Assembly 9789 na Scaffold43 unplaced-scaffold na na KK214803.1 <> na Primary Assembly 9483 na Scaffold44 unplaced-scaffold na na KK214804.1 <> na Primary Assembly 9449 na Scaffold45 unplaced-scaffold na na KK214805.1 <> na Primary Assembly 9346 na Scaffold47 unplaced-scaffold na na KK214806.1 <> na Primary Assembly 8968 na Scaffold48 unplaced-scaffold na na KK214807.1 <> na Primary Assembly 8931 na Scaffold51 unplaced-scaffold na na KK214808.1 <> na Primary Assembly 7648 na Scaffold53 unplaced-scaffold na na KK214809.1 <> na Primary Assembly 7482 na Scaffold54 unplaced-scaffold na na KK214810.1 <> na Primary Assembly 7479 na Scaffold55 unplaced-scaffold na na KK214811.1 <> na Primary Assembly 7366 na Scaffold56 unplaced-scaffold na na KK214812.1 <> na Primary Assembly 7306 na Scaffold102 unplaced-scaffold na na KK214813.1 <> na Primary Assembly 1474 na scaffold30 unlocalized-scaffold MT Mitochondrion JGYC01000001.1 <> na non-nuclear 40754 na scaffold78 unlocalized-scaffold MT Mitochondrion JGYC01000002.1 <> na non-nuclear 2451 na