# Assembly name: mCalJac1.pat.X # Organism name: Callithrix jacchus (white-tufted-ear marmoset) # Isolate: mCalJac1 # Sex: male # Taxid: 9483 # BioSample: SAMN12368443 # BioProject: PRJNA597600 # Submitter: Vertebrate Genomes Project # Date: 2020-03-10 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAALXP01 # Assembly method: TrioCanu v. 1.8; purge_dups v. 1.0.0; Scaff 10x v. 4.1.0; Bionano solve v. solve 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow polishing and gap filling v. smrtlink_6.0.0.47841; Longranger Align v. 2.2.2; Freebayes v. 1.3.1; gEVAL manual curation v. 2019-12-11; Zhang manual curation v. 2020-02-12; VGP assembly pipeline v. 1.6 # Expected final version: no # Genome coverage: 63.44x # Sequencing technology: PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS # GenBank assembly accession: GCA_011100555.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_011100565.1 Primary Assembly ## GCA_011100575.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Super_scaffold_pat_1 assembled-molecule 1 Chromosome CM021915.1 <> na Primary Assembly 216975769 na Super_scaffold_pat_2 assembled-molecule 2 Chromosome CM021916.1 <> na Primary Assembly 202808461 na Super_scaffold_pat_3 assembled-molecule 3 Chromosome CM021917.1 <> na Primary Assembly 189455076 na Super_scaffold_pat_4 assembled-molecule 4 Chromosome CM021918.1 <> na Primary Assembly 173414057 na Super_scaffold_pat_5 assembled-molecule 5 Chromosome CM021919.1 <> na Primary Assembly 161716902 na Super_scaffold_pat_9 assembled-molecule 6 Chromosome CM021920.1 <> na Primary Assembly 159674559 na Super_scaffold_pat_6 assembled-molecule 7 Chromosome CM021921.1 <> na Primary Assembly 156129252 na Super_scaffold_pat_11 assembled-molecule 8 Chromosome CM021922.1 <> na Primary Assembly 126104592 na Super_scaffold_pat_8 assembled-molecule 9 Chromosome CM021923.1 <> na Primary Assembly 132900640 na Super_scaffold_pat_14 assembled-molecule 10 Chromosome CM021924.1 <> na Primary Assembly 136971485 na Super_scaffold_pat_10 assembled-molecule 11 Chromosome CM021925.1 <> na Primary Assembly 128529401 na Super_scaffold_pat_16 assembled-molecule 12 Chromosome CM021926.1 <> na Primary Assembly 123697827 na Super_scaffold_pat_12 assembled-molecule 13 Chromosome CM021927.1 <> na Primary Assembly 117638787 na Super_scaffold_pat_13 assembled-molecule 14 Chromosome CM021928.1 <> na Primary Assembly 112969529 na Super_scaffold_pat_15 assembled-molecule 15 Chromosome CM021929.1 <> na Primary Assembly 98621277 na Super_scaffold_pat_17 assembled-molecule 16 Chromosome CM021930.1 <> na Primary Assembly 98110366 na Super_scaffold_pat_18 assembled-molecule 17 Chromosome CM021931.1 <> na Primary Assembly 74700100 na Super_scaffold_pat_22 assembled-molecule 18 Chromosome CM021932.1 <> na Primary Assembly 47063576 na Super_scaffold_pat_20 assembled-molecule 19 Chromosome CM021933.1 <> na Primary Assembly 50540917 na Super_scaffold_pat_23 assembled-molecule 20 Chromosome CM021934.1 <> na Primary Assembly 44412365 na Super_scaffold_pat_19 assembled-molecule 21 Chromosome CM021935.1 <> na Primary Assembly 50614742 na Super_scaffold_pat_21 assembled-molecule 22 Chromosome CM021936.1 <> na Primary Assembly 49900457 na Super_scaffold_mat_18 assembled-molecule X Chromosome CM021937.1 <> na Primary Assembly 146897247 na Super_scaffold_pat_24 assembled-molecule Y Chromosome CM021938.1 <> na Primary Assembly 5064689 na mat_scaffold_113_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000338.1 <> na Primary Assembly 95879 na mat_scaffold_310_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000339.1 <> na Primary Assembly 49303 na mat_scaffold_340_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000340.1 <> na Primary Assembly 46763 na mat_scaffold_356_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000341.1 <> na Primary Assembly 45658 na mat_scaffold_542_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000342.1 <> na Primary Assembly 33897 na mat_scaffold_572_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000343.1 <> na Primary Assembly 31835 na mat_scaffold_585_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000344.1 <> na Primary Assembly 31203 na mat_scaffold_601_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000345.1 <> na Primary Assembly 29991 na mat_scaffold_619_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000346.1 <> na Primary Assembly 28803 na mat_scaffold_708_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000347.1 <> na Primary Assembly 20338 na mat_scaffold_710_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000348.1 <> na Primary Assembly 20229 na mat_scaffold_714_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000349.1 <> na Primary Assembly 20074 na mat_scaffold_730_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000350.1 <> na Primary Assembly 17761 na mat_scaffold_763_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000351.1 <> na Primary Assembly 13900 na mat_scaffold_780_arrow_ctg1 unlocalized-scaffold X Chromosome JAALXP010000352.1 <> na Primary Assembly 11904 na pat_scaffold_134_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000105.1 <> na Primary Assembly 112980 na pat_scaffold_171_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000121.1 <> na Primary Assembly 84871 na pat_scaffold_196_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000127.1 <> na Primary Assembly 77632 na pat_scaffold_441_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000175.1 <> na Primary Assembly 50861 na pat_scaffold_45_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000180.1 <> na Primary Assembly 815593 na pat_scaffold_501_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000188.1 <> na Primary Assembly 47029 na pat_scaffold_89_arrow_ctg1 unlocalized-scaffold Y Chromosome JAALXP010000297.1 <> na Primary Assembly 177213 na pat_scaffold_1001_arrow_ctg1 unplaced-scaffold na na JAALXP010000024.1 <> na Primary Assembly 15078 na pat_scaffold_1003_arrow_ctg1 unplaced-scaffold na na JAALXP010000025.1 <> na Primary Assembly 14874 na pat_scaffold_1010_arrow_ctg1 unplaced-scaffold na na JAALXP010000026.1 <> na Primary Assembly 14285 na pat_scaffold_1016_arrow_ctg1 unplaced-scaffold na na JAALXP010000027.1 <> na Primary Assembly 13375 na pat_scaffold_1018_arrow_ctg1 unplaced-scaffold na na JAALXP010000028.1 <> na Primary Assembly 12905 na pat_scaffold_1019_arrow_ctg1 unplaced-scaffold na na JAALXP010000029.1 <> na Primary Assembly 12827 na pat_scaffold_1020_arrow_ctg1 unplaced-scaffold na na JAALXP010000030.1 <> na Primary Assembly 12812 na pat_scaffold_1023_arrow_ctg1 unplaced-scaffold na na JAALXP010000031.1 <> na Primary Assembly 12479 na pat_scaffold_1031_arrow_ctg1 unplaced-scaffold na na JAALXP010000032.1 <> na Primary Assembly 11225 na pat_scaffold_1032_arrow_ctg1 unplaced-scaffold na na JAALXP010000033.1 <> na Primary Assembly 11222 na pat_scaffold_1033_arrow_ctg1 unplaced-scaffold na na JAALXP010000034.1 <> na Primary Assembly 11092 na pat_scaffold_1035_arrow_ctg1 unplaced-scaffold na na JAALXP010000035.1 <> na Primary Assembly 10908 na pat_scaffold_1037_arrow_ctg1 unplaced-scaffold na na JAALXP010000036.1 <> na Primary Assembly 10804 na pat_scaffold_1041_arrow_ctg1 unplaced-scaffold na na JAALXP010000037.1 <> na Primary Assembly 10543 na pat_scaffold_1047_arrow_ctg1 unplaced-scaffold na na JAALXP010000038.1 <> na Primary Assembly 9976 na pat_scaffold_1049_arrow_ctg1 unplaced-scaffold na na JAALXP010000039.1 <> na Primary Assembly 9827 na pat_scaffold_1050_arrow_ctg1 unplaced-scaffold na na JAALXP010000040.1 <> na Primary Assembly 9812 na pat_scaffold_1053_arrow_ctg1 unplaced-scaffold na na JAALXP010000041.1 <> na Primary Assembly 9658 na pat_scaffold_1054_arrow_ctg1 unplaced-scaffold na na JAALXP010000042.1 <> na Primary Assembly 9589 na pat_scaffold_1058_arrow_ctg1 unplaced-scaffold na na JAALXP010000043.1 <> na Primary Assembly 9356 na pat_scaffold_1068_arrow_ctg1 unplaced-scaffold na na JAALXP010000044.1 <> na Primary Assembly 8834 na pat_scaffold_1074_arrow_ctg1 unplaced-scaffold na na JAALXP010000045.1 <> na Primary Assembly 8127 na pat_scaffold_107_arrow_ctg1 unplaced-scaffold na na JAALXP010000046.1 <> na Primary Assembly 146798 na pat_scaffold_1080_arrow_ctg1 unplaced-scaffold na na JAALXP010000047.1 <> na Primary Assembly 7810 na pat_scaffold_1081_arrow_ctg1 unplaced-scaffold na na JAALXP010000048.1 <> na Primary Assembly 7767 na pat_scaffold_1082_arrow_ctg1 unplaced-scaffold na na JAALXP010000049.1 <> na Primary Assembly 7712 na pat_scaffold_1083_arrow_ctg1 unplaced-scaffold na na JAALXP010000050.1 <> na Primary Assembly 7645 na pat_scaffold_1089_arrow_ctg1 unplaced-scaffold na na JAALXP010000051.1 <> na Primary Assembly 7267 na pat_scaffold_108_arrow_ctg1 unplaced-scaffold na na JAALXP010000052.1 <> na Primary Assembly 145750 na pat_scaffold_1107_arrow_ctg1 unplaced-scaffold na na JAALXP010000053.1 <> na Primary Assembly 5965 na pat_scaffold_1109_arrow_ctg1 unplaced-scaffold na na JAALXP010000054.1 <> na Primary Assembly 5953 na pat_scaffold_1113_arrow_ctg1 unplaced-scaffold na na JAALXP010000055.1 <> na Primary Assembly 5777 na pat_scaffold_1114_arrow_ctg1 unplaced-scaffold na na JAALXP010000056.1 <> na Primary Assembly 5753 na pat_scaffold_1118_arrow_ctg1 unplaced-scaffold na na JAALXP010000057.1 <> na Primary Assembly 5459 na pat_scaffold_1125_arrow_ctg1 unplaced-scaffold na na JAALXP010000058.1 <> na Primary Assembly 5296 na pat_scaffold_1130_arrow_ctg1 unplaced-scaffold na na JAALXP010000059.1 <> na Primary Assembly 5079 na pat_scaffold_1131_arrow_ctg1 unplaced-scaffold na na JAALXP010000060.1 <> na Primary Assembly 4953 na pat_scaffold_1133_arrow_ctg1 unplaced-scaffold na na JAALXP010000061.1 <> na Primary Assembly 4907 na pat_scaffold_1134_arrow_ctg1 unplaced-scaffold na na JAALXP010000062.1 <> na Primary Assembly 4670 na pat_scaffold_1135_arrow_ctg1 unplaced-scaffold na na JAALXP010000063.1 <> na Primary Assembly 4676 na pat_scaffold_113_arrow_ctg1 unplaced-scaffold na na JAALXP010000064.1 <> na Primary Assembly 141910 na pat_scaffold_1140_arrow_ctg1 unplaced-scaffold na na JAALXP010000065.1 <> na Primary Assembly 4345 na pat_scaffold_1141_arrow_ctg1 unplaced-scaffold na na JAALXP010000066.1 <> na Primary Assembly 4352 na pat_scaffold_1144_arrow_ctg1 unplaced-scaffold na na JAALXP010000067.1 <> na Primary Assembly 4175 na pat_scaffold_1145_arrow_ctg1 unplaced-scaffold na na JAALXP010000068.1 <> na Primary Assembly 4102 na pat_scaffold_1146_arrow_ctg1 unplaced-scaffold na na JAALXP010000069.1 <> na Primary Assembly 4095 na pat_scaffold_1148_arrow_ctg1 unplaced-scaffold na na JAALXP010000070.1 <> na Primary Assembly 4036 na pat_scaffold_114_arrow_ctg1 unplaced-scaffold na na JAALXP010000071.1 <> na Primary Assembly 140151 na pat_scaffold_1150_arrow_ctg1 unplaced-scaffold na na JAALXP010000072.1 <> na Primary Assembly 3972 na pat_scaffold_1154_arrow_ctg1 unplaced-scaffold na na JAALXP010000073.1 <> na Primary Assembly 3810 na pat_scaffold_115_arrow_ctg1 unplaced-scaffold na na JAALXP010000074.1 <> na Primary Assembly 140206 na pat_scaffold_1161_arrow_ctg1 unplaced-scaffold na na JAALXP010000075.1 <> na Primary Assembly 3537 na pat_scaffold_1162_arrow_ctg1 unplaced-scaffold na na JAALXP010000076.1 <> na Primary Assembly 3521 na pat_scaffold_1165_arrow_ctg1 unplaced-scaffold na na JAALXP010000077.1 <> na Primary Assembly 3387 na pat_scaffold_1167_arrow_ctg1 unplaced-scaffold na na JAALXP010000078.1 <> na Primary Assembly 3323 na pat_scaffold_1170_arrow_ctg1 unplaced-scaffold na na JAALXP010000079.1 <> na Primary Assembly 3282 na pat_scaffold_1173_arrow_ctg1 unplaced-scaffold na na JAALXP010000080.1 <> na Primary Assembly 3077 na pat_scaffold_1174_arrow_ctg1 unplaced-scaffold na na JAALXP010000081.1 <> na Primary Assembly 3054 na pat_scaffold_1177_arrow_ctg1 unplaced-scaffold na na JAALXP010000082.1 <> na Primary Assembly 2933 na pat_scaffold_1178_arrow_ctg1 unplaced-scaffold na na JAALXP010000083.1 <> na Primary Assembly 2913 na pat_scaffold_1179_arrow_ctg1 unplaced-scaffold na na JAALXP010000084.1 <> na Primary Assembly 2902 na pat_scaffold_117_arrow_ctg1 unplaced-scaffold na na JAALXP010000085.1 <> na Primary Assembly 137776 na pat_scaffold_1180_arrow_ctg1 unplaced-scaffold na na JAALXP010000086.1 <> na Primary Assembly 2835 na pat_scaffold_1182_arrow_ctg1 unplaced-scaffold na na JAALXP010000087.1 <> na Primary Assembly 2799 na pat_scaffold_1185_arrow_ctg1 unplaced-scaffold na na JAALXP010000088.1 <> na Primary Assembly 2729 na pat_scaffold_1188_arrow_ctg1 unplaced-scaffold na na JAALXP010000089.1 <> na Primary Assembly 2453 na pat_scaffold_1189_arrow_ctg1 unplaced-scaffold na na JAALXP010000090.1 <> na Primary Assembly 2444 na pat_scaffold_118_arrow_ctg1 unplaced-scaffold na na JAALXP010000091.1 <> na Primary Assembly 131326 na pat_scaffold_1194_arrow_ctg1 unplaced-scaffold na na JAALXP010000092.1 <> na Primary Assembly 2080 na pat_scaffold_1195_arrow_ctg1 unplaced-scaffold na na JAALXP010000093.1 <> na Primary Assembly 1810 na pat_scaffold_1196_arrow_ctg1 unplaced-scaffold na na JAALXP010000094.1 <> na Primary Assembly 1762 na pat_scaffold_1199_arrow_ctg1 unplaced-scaffold na na JAALXP010000095.1 <> na Primary Assembly 1633 na pat_scaffold_1202_arrow_ctg1 unplaced-scaffold na na JAALXP010000096.1 <> na Primary Assembly 1404 na pat_scaffold_1203_arrow_ctg1 unplaced-scaffold na na JAALXP010000097.1 <> na Primary Assembly 1254 na pat_scaffold_123_arrow_ctg1 unplaced-scaffold na na JAALXP010000098.1 <> na Primary Assembly 124450 na pat_scaffold_124_arrow_ctg1 unplaced-scaffold na na JAALXP010000099.1 <> na Primary Assembly 124572 na pat_scaffold_125_arrow_ctg1 unplaced-scaffold na na JAALXP010000100.1 <> na Primary Assembly 124513 na pat_scaffold_127_arrow_ctg1 unplaced-scaffold na na JAALXP010000101.1 <> na Primary Assembly 122749 na pat_scaffold_131_arrow_ctg1 unplaced-scaffold na na JAALXP010000102.1 <> na Primary Assembly 119199 na pat_scaffold_132_arrow_ctg1 unplaced-scaffold na na JAALXP010000103.1 <> na Primary Assembly 97170 na pat_scaffold_133_arrow_ctg1 unplaced-scaffold na na JAALXP010000104.1 <> na Primary Assembly 117062 na pat_scaffold_135_arrow_ctg1 unplaced-scaffold na na JAALXP010000106.1 <> na Primary Assembly 112892 na pat_scaffold_136_arrow_ctg1 unplaced-scaffold na na JAALXP010000107.1 <> na Primary Assembly 108266 na pat_scaffold_138_arrow_ctg1 unplaced-scaffold na na JAALXP010000108.1 <> na Primary Assembly 106961 na pat_scaffold_140_arrow_ctg1 unplaced-scaffold na na JAALXP010000109.1 <> na Primary Assembly 106387 na pat_scaffold_141_arrow_ctg1 unplaced-scaffold na na JAALXP010000110.1 <> na Primary Assembly 107103 na pat_scaffold_144_arrow_ctg1 unplaced-scaffold na na JAALXP010000111.1 <> na Primary Assembly 102907 na pat_scaffold_146_arrow_ctg1 unplaced-scaffold na na JAALXP010000112.1 <> na Primary Assembly 102034 na pat_scaffold_147_arrow_ctg1 unplaced-scaffold na na JAALXP010000113.1 <> na Primary Assembly 101826 na pat_scaffold_149_arrow_ctg1 unplaced-scaffold na na JAALXP010000114.1 <> na Primary Assembly 98341 na pat_scaffold_151_arrow_ctg1 unplaced-scaffold na na JAALXP010000115.1 <> na Primary Assembly 97642 na pat_scaffold_155_arrow_ctg1 unplaced-scaffold na na JAALXP010000116.1 <> na Primary Assembly 90511 na pat_scaffold_156_arrow_ctg1 unplaced-scaffold na na JAALXP010000117.1 <> na Primary Assembly 91531 na pat_scaffold_160_arrow_ctg1 unplaced-scaffold na na JAALXP010000118.1 <> na Primary Assembly 89142 na pat_scaffold_165_arrow_ctg1 unplaced-scaffold na na JAALXP010000119.1 <> na Primary Assembly 86499 na pat_scaffold_167_arrow_ctg1 unplaced-scaffold na na JAALXP010000120.1 <> na Primary Assembly 86407 na pat_scaffold_180_arrow_ctg1 unplaced-scaffold na na JAALXP010000122.1 <> na Primary Assembly 82059 na pat_scaffold_182_arrow_ctg1 unplaced-scaffold na na JAALXP010000123.1 <> na Primary Assembly 80930 na pat_scaffold_184_arrow_ctg1 unplaced-scaffold na na JAALXP010000124.1 <> na Primary Assembly 80879 na pat_scaffold_187_arrow_ctg1 unplaced-scaffold na na JAALXP010000125.1 <> na Primary Assembly 80427 na pat_scaffold_190_arrow_ctg1 unplaced-scaffold na na JAALXP010000126.1 <> na Primary Assembly 79818 na pat_scaffold_197_arrow_ctg1 unplaced-scaffold na na JAALXP010000128.1 <> na Primary Assembly 77435 na pat_scaffold_202_arrow_ctg1 unplaced-scaffold na na JAALXP010000129.1 <> na Primary Assembly 75412 na pat_scaffold_210_arrow_ctg1 unplaced-scaffold na na JAALXP010000130.1 <> na Primary Assembly 73668 na pat_scaffold_212_arrow_ctg1 unplaced-scaffold na na JAALXP010000131.1 <> na Primary Assembly 73258 na pat_scaffold_215_arrow_ctg1 unplaced-scaffold na na JAALXP010000132.1 <> na Primary Assembly 72130 na pat_scaffold_222_arrow_ctg1 unplaced-scaffold na na JAALXP010000133.1 <> na Primary Assembly 71339 na pat_scaffold_229_arrow_ctg1 unplaced-scaffold na na JAALXP010000134.1 <> na Primary Assembly 70433 na pat_scaffold_233_arrow_ctg1 unplaced-scaffold na na JAALXP010000135.1 <> na Primary Assembly 70086 na pat_scaffold_237_arrow_ctg1 unplaced-scaffold na na JAALXP010000136.1 <> na Primary Assembly 69187 na pat_scaffold_245_arrow_ctg1 unplaced-scaffold na na JAALXP010000137.1 <> na Primary Assembly 68451 na pat_scaffold_250_arrow_ctg1 unplaced-scaffold na na JAALXP010000138.1 <> na Primary Assembly 67944 na pat_scaffold_252_arrow_ctg1 unplaced-scaffold na na JAALXP010000139.1 <> na Primary Assembly 68254 na pat_scaffold_258_arrow_ctg1 unplaced-scaffold na na JAALXP010000140.1 <> na Primary Assembly 67004 na pat_scaffold_262_arrow_ctg1 unplaced-scaffold na na JAALXP010000141.1 <> na Primary Assembly 66548 na pat_scaffold_267_arrow_ctg1 unplaced-scaffold na na JAALXP010000142.1 <> na Primary Assembly 66216 na pat_scaffold_270_arrow_ctg1 unplaced-scaffold na na JAALXP010000143.1 <> na Primary Assembly 65514 na pat_scaffold_274_arrow_ctg1 unplaced-scaffold na na JAALXP010000144.1 <> na Primary Assembly 64815 na pat_scaffold_275_arrow_ctg1 unplaced-scaffold na na JAALXP010000145.1 <> na Primary Assembly 64843 na pat_scaffold_277_arrow_ctg1 unplaced-scaffold na na JAALXP010000146.1 <> na Primary Assembly 64660 na pat_scaffold_283_arrow_ctg1 unplaced-scaffold na na JAALXP010000147.1 <> na Primary Assembly 64197 na pat_scaffold_291_arrow_ctg1 unplaced-scaffold na na JAALXP010000148.1 <> na Primary Assembly 63048 na pat_scaffold_300_arrow_ctg1 unplaced-scaffold na na JAALXP010000149.1 <> na Primary Assembly 61958 na pat_scaffold_312_arrow_ctg1 unplaced-scaffold na na JAALXP010000150.1 <> na Primary Assembly 60387 na pat_scaffold_314_arrow_ctg1 unplaced-scaffold na na JAALXP010000151.1 <> na Primary Assembly 60223 na pat_scaffold_319_arrow_ctg1 unplaced-scaffold na na JAALXP010000152.1 <> na Primary Assembly 59722 na pat_scaffold_328_arrow_ctg1 unplaced-scaffold na na JAALXP010000153.1 <> na Primary Assembly 59092 na pat_scaffold_339_arrow_ctg1 unplaced-scaffold na na JAALXP010000154.1 <> na Primary Assembly 58433 na pat_scaffold_342_arrow_ctg1 unplaced-scaffold na na JAALXP010000155.1 <> na Primary Assembly 58260 na pat_scaffold_349_arrow_ctg1 unplaced-scaffold na na JAALXP010000156.1 <> na Primary Assembly 57708 na pat_scaffold_372_arrow_ctg1 unplaced-scaffold na na JAALXP010000157.1 <> na Primary Assembly 56675 na pat_scaffold_375_arrow_ctg1 unplaced-scaffold na na JAALXP010000158.1 <> na Primary Assembly 56285 na pat_scaffold_376_arrow_ctg1 unplaced-scaffold na na JAALXP010000159.1 <> na Primary Assembly 56157 na pat_scaffold_377_arrow_ctg1 unplaced-scaffold na na JAALXP010000160.1 <> na Primary Assembly 56091 na pat_scaffold_386_arrow_ctg1 unplaced-scaffold na na JAALXP010000161.1 <> na Primary Assembly 55226 na pat_scaffold_391_arrow_ctg1 unplaced-scaffold na na JAALXP010000162.1 <> na Primary Assembly 54784 na pat_scaffold_395_arrow_ctg1 unplaced-scaffold na na JAALXP010000163.1 <> na Primary Assembly 55097 na pat_scaffold_39_arrow_ctg1 unplaced-scaffold na na JAALXP010000164.1 <> na Primary Assembly 1202395 na pat_scaffold_400_arrow_ctg1 unplaced-scaffold na na JAALXP010000165.1 <> na Primary Assembly 54037 na pat_scaffold_405_arrow_ctg1 unplaced-scaffold na na JAALXP010000166.1 <> na Primary Assembly 53081 na pat_scaffold_412_arrow_ctg1 unplaced-scaffold na na JAALXP010000167.1 <> na Primary Assembly 52703 na pat_scaffold_416_arrow_ctg1 unplaced-scaffold na na JAALXP010000168.1 <> na Primary Assembly 52476 na pat_scaffold_41_arrow_ctg1 unplaced-scaffold na na JAALXP010000169.1 <> na Primary Assembly 1072751 na pat_scaffold_421_arrow_ctg1 unplaced-scaffold na na JAALXP010000170.1 <> na Primary Assembly 52405 na pat_scaffold_424_arrow_ctg1 unplaced-scaffold na na JAALXP010000171.1 <> na Primary Assembly 52018 na pat_scaffold_436_arrow_ctg1 unplaced-scaffold na na JAALXP010000172.1 <> na Primary Assembly 51271 na pat_scaffold_437_arrow_ctg1 unplaced-scaffold na na JAALXP010000173.1 <> na Primary Assembly 51597 na pat_scaffold_439_arrow_ctg1 unplaced-scaffold na na JAALXP010000174.1 <> na Primary Assembly 51090 na pat_scaffold_443_arrow_ctg1 unplaced-scaffold na na JAALXP010000176.1 <> na Primary Assembly 50750 na pat_scaffold_444_arrow_ctg1 unplaced-scaffold na na JAALXP010000177.1 <> na Primary Assembly 50764 na pat_scaffold_44_arrow_ctg1 unplaced-scaffold na na JAALXP010000178.1 <> na Primary Assembly 825309 na pat_scaffold_454_arrow_ctg1 unplaced-scaffold na na JAALXP010000179.1 <> na Primary Assembly 49710 na pat_scaffold_469_arrow_ctg1 unplaced-scaffold na na JAALXP010000181.1 <> na Primary Assembly 49093 na pat_scaffold_46_arrow_ctg1 unplaced-scaffold na na JAALXP010000182.1 <> na Primary Assembly 800383 na pat_scaffold_481_arrow_ctg1 unplaced-scaffold na na JAALXP010000183.1 <> na Primary Assembly 48108 na pat_scaffold_485_arrow_ctg1 unplaced-scaffold na na JAALXP010000184.1 <> na Primary Assembly 47949 na pat_scaffold_488_arrow_ctg1 unplaced-scaffold na na JAALXP010000185.1 <> na Primary Assembly 47595 na pat_scaffold_490_arrow_ctg1 unplaced-scaffold na na JAALXP010000186.1 <> na Primary Assembly 47595 na pat_scaffold_496_arrow_ctg1 unplaced-scaffold na na JAALXP010000187.1 <> na Primary Assembly 47250 na pat_scaffold_50_arrow_ctg1 unplaced-scaffold na na JAALXP010000189.1 <> na Primary Assembly 669012 na pat_scaffold_515_arrow_ctg1 unplaced-scaffold na na JAALXP010000190.1 <> na Primary Assembly 45974 na pat_scaffold_51_arrow_ctg1 unplaced-scaffold na na JAALXP010000191.1 <> na Primary Assembly 603501 na 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