# Assembly name:  mRouAeg1.pri
# Organism name:  Rousettus aegyptiacus (Egyptian rousette)
# Isolate:  mRouAeg1
# Sex:  male
# Taxid:          9407
# BioSample:      SAMN14734550
# BioProject:     PRJNA628585
# Submitter:      Bat1K
# Date:           2025-12-17
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JACASE02
# Assembly method: DAmar v. APRIL-2019; Bionano Solve DLS v. 3.3; Salsa2 HiC v. git commit: e3ae7d8; GenomicConsensus v. git commit: 038de5c; longranger align v. 2.2.0; Freebayes v. 1.2.0; HiGlass manual curation v. 1.5
# Expected final version: No
# Genome coverage: 64.6x
# Sequencing technology: PacBio Sequel CLR; 10X Genomics Chromium linked reads; Bionano Genomics; Arima Genomics Hi-C kit; PacBio Sequel IsoSeq
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_014176215.2
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_014176225.2		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	CM133687.1	<>	na	Primary Assembly	185846147	na
SUPER_2	assembled-molecule	2	Chromosome	CM133688.1	<>	na	Primary Assembly	177604325	na
SUPER_3	assembled-molecule	3	Chromosome	CM133689.1	<>	na	Primary Assembly	174115039	na
SUPER_4	assembled-molecule	4	Chromosome	CM133690.1	<>	na	Primary Assembly	162414283	na
SUPER_5	assembled-molecule	5	Chromosome	CM133691.1	<>	na	Primary Assembly	121834110	na
SUPER_6	assembled-molecule	6	Chromosome	CM133692.1	<>	na	Primary Assembly	115500777	na
SUPER_7	assembled-molecule	7	Chromosome	CM133693.1	<>	na	Primary Assembly	113811895	na
SUPER_8	assembled-molecule	8	Chromosome	CM133694.1	<>	na	Primary Assembly	111953248	na
SUPER_9	assembled-molecule	9	Chromosome	CM133695.1	<>	na	Primary Assembly	99627929	na
SUPER_10	assembled-molecule	10	Chromosome	CM133696.1	<>	na	Primary Assembly	95986979	na
SUPER_11	assembled-molecule	11	Chromosome	CM133697.1	<>	na	Primary Assembly	94233832	na
SUPER_12	assembled-molecule	12	Chromosome	CM133698.1	<>	na	Primary Assembly	80974990	na
SUPER_13	assembled-molecule	13	Chromosome	CM133699.1	<>	na	Primary Assembly	61848409	na
SUPER_14	assembled-molecule	14	Chromosome	CM133700.1	<>	na	Primary Assembly	60676320	na
SUPER_15	assembled-molecule	15	Chromosome	CM133701.1	<>	na	Primary Assembly	54924399	na
SUPER_16	assembled-molecule	16	Chromosome	CM133702.1	<>	na	Primary Assembly	46168107	na
SUPER_17	assembled-molecule	17	Chromosome	CM133703.1	<>	na	Primary Assembly	22187122	na
SUPER_X	assembled-molecule	X	Chromosome	CM133704.1	<>	na	Primary Assembly	106502882	na
SUPER_Y	assembled-molecule	Y	Chromosome	CM133705.1	<>	na	Primary Assembly	5374297	na
SUPER_16_unloc_1	unlocalized-scaffold	16	Chromosome	JACASE020000020.1	<>	na	Primary Assembly	173365	na
SUPER_17_unloc_1	unlocalized-scaffold	17	Chromosome	JACASE020000022.1	<>	na	Primary Assembly	115576	na
SUPER_Y_unloc_1	unlocalized-scaffold	Y	Chromosome	JACASE020000011.1	<>	na	Primary Assembly	594283	na
Scaffold_20	unplaced-scaffold	na	na	JACASE020000023.1	<>	na	Primary Assembly	102411	na
Scaffold_21	unplaced-scaffold	na	na	JACASE020000024.1	<>	na	Primary Assembly	68918	na
Scaffold_22	unplaced-scaffold	na	na	JACASE020000025.1	<>	na	Primary Assembly	68636	na
Scaffold_23	unplaced-scaffold	na	na	JACASE020000026.1	<>	na	Primary Assembly	48257	na
Scaffold_24	unplaced-scaffold	na	na	JACASE020000027.1	<>	na	Primary Assembly	24893	na