# Assembly name: Pfru_yukari_1.0 # Organism name: Perilla frutescens (beefsteak plant) # Infraspecific name: cultivar=Hoko-3 # Taxid: 48386 # BioSample: SAMD00469863 # BioProject: PRJDB13609 # Submitter: Laboratory of Genome Informatics Graduate School of Integrated Sciences for Life, Hiroshima University # Date: 2022-09-22 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: BRKX01 # Assembly method: Hifiasm v. 0.16.1 # Genome coverage: 57.5x # Sequencing technology: PacBio Sequel IIe # RefSeq category: Reference Genome # GenBank assembly accession: GCA_026008535.1 # Linked assembly: GCA_026074415.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_026008545.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Pfg00001 unlocalized-scaffold 01 Chromosome BRKX01000001.1 <> na Primary Assembly 74920432 na Pfg00002 unlocalized-scaffold 02 Chromosome BRKX01000002.1 <> na Primary Assembly 77433471 na Pfg00003 unlocalized-scaffold 03 Chromosome BRKX01000003.1 <> na Primary Assembly 76327020 na Pfg00004 unlocalized-scaffold 04 Chromosome BRKX01000004.1 <> na Primary Assembly 70270432 na Pfg00005 unlocalized-scaffold 05 Chromosome BRKX01000005.1 <> na Primary Assembly 75020663 na Pfg00006 unlocalized-scaffold 06 Chromosome BRKX01000006.1 <> na Primary Assembly 60522085 na Pfg00007 unlocalized-scaffold 07 Chromosome BRKX01000007.1 <> na Primary Assembly 67338019 na Pfg00008 unlocalized-scaffold 08 Chromosome BRKX01000008.1 <> na Primary Assembly 69386732 na Pfg00009 unlocalized-scaffold 09 Chromosome BRKX01000009.1 <> na Primary Assembly 66017243 na Pfg00010 unlocalized-scaffold 10 Chromosome BRKX01000010.1 <> na Primary Assembly 63199218 na Pfg00011 unlocalized-scaffold 11 Chromosome BRKX01000011.1 <> na Primary Assembly 58130043 na Pfg00012 unlocalized-scaffold 12 Chromosome BRKX01000012.1 <> na Primary Assembly 63334402 na Pfg00013 unlocalized-scaffold 13 Chromosome BRKX01000013.1 <> na Primary Assembly 59054341 na Pfg00014 unlocalized-scaffold 14 Chromosome BRKX01000014.1 <> na Primary Assembly 56782876 na Pfg00015 unlocalized-scaffold 15 Chromosome BRKX01000015.1 <> na Primary Assembly 55050561 na Pfg00016 unlocalized-scaffold 16 Chromosome BRKX01000016.1 <> na Primary Assembly 62053500 na Pfg00017 unlocalized-scaffold 17 Chromosome BRKX01000017.1 <> na Primary Assembly 53874329 na Pfg00018 unlocalized-scaffold 18 Chromosome BRKX01000018.1 <> na Primary Assembly 50190460 na Pfg00019 unlocalized-scaffold 19 Chromosome BRKX01000019.1 <> na Primary Assembly 50922861 na Pfg00020 unlocalized-scaffold 20 Chromosome BRKX01000020.1 <> na Primary Assembly 38477933 na Pfg00021 unplaced-scaffold na na BRKX01000021.1 <> na Primary Assembly 2366300 na Pfg00022 unplaced-scaffold na na BRKX01000022.1 <> na Primary Assembly 1588684 na Pfg00023 unplaced-scaffold na na BRKX01000023.1 <> na Primary Assembly 1080742 na Pfg00024 unplaced-scaffold na na BRKX01000024.1 <> na Primary Assembly 637542 na Pfg00025 unplaced-scaffold na na BRKX01000025.1 <> na Primary Assembly 430874 na Pfg00026 unplaced-scaffold na na BRKX01000026.1 <> na Primary Assembly 397947 na Pfg00027 unplaced-scaffold na na BRKX01000027.1 <> na Primary Assembly 352308 na Pfg00028 unplaced-scaffold na na BRKX01000028.1 <> na Primary Assembly 217145 na Pfg00029 unplaced-scaffold na na BRKX01000029.1 <> na Primary Assembly 196389 na Pfg00030 unplaced-scaffold na na BRKX01000030.1 <> na Primary Assembly 193911 na Pfg00031 unplaced-scaffold na na BRKX01000031.1 <> na Primary Assembly 191221 na Pfg00032 unplaced-scaffold na na BRKX01000032.1 <> na Primary Assembly 190535 na Pfg00033 unplaced-scaffold na na BRKX01000033.1 <> na Primary Assembly 187147 na Pfg00034 unplaced-scaffold na na BRKX01000034.1 <> na Primary Assembly 174213 na Pfg00035 unplaced-scaffold na na BRKX01000035.1 <> na Primary Assembly 167148 na Pfg00036 unplaced-scaffold na na BRKX01000036.1 <> na Primary Assembly 137739 na Pfg00037 unplaced-scaffold na na BRKX01000037.1 <> na Primary Assembly 137525 na Pfg00038 unplaced-scaffold na na BRKX01000038.1 <> na Primary Assembly 104109 na Pfg00039 unplaced-scaffold na na BRKX01000039.1 <> na Primary Assembly 103180 na Pfg00040 unplaced-scaffold na na BRKX01000040.1 <> na Primary Assembly 96059 na Pfg00041 unplaced-scaffold na na BRKX01000041.1 <> na Primary Assembly 92154 na Pfg00042 unplaced-scaffold na na BRKX01000042.1 <> na Primary Assembly 90717 na Pfg00043 unplaced-scaffold na na BRKX01000043.1 <> na Primary Assembly 89645 na Pfg00044 unplaced-scaffold na na BRKX01000044.1 <> na Primary Assembly 84689 na Pfg00045 unplaced-scaffold na na BRKX01000045.1 <> na Primary Assembly 83042 na Pfg00046 unplaced-scaffold na na BRKX01000046.1 <> na Primary Assembly 82270 na Pfg00047 unplaced-scaffold na na BRKX01000047.1 <> na Primary Assembly 76469 na Pfg00048 unplaced-scaffold na na BRKX01000048.1 <> na Primary Assembly 75993 na Pfg00049 unplaced-scaffold na na BRKX01000049.1 <> na Primary Assembly 73282 na Pfg00050 unplaced-scaffold na na BRKX01000050.1 <> na Primary Assembly 71898 na Pfg00051 unplaced-scaffold na na BRKX01000051.1 <> na Primary Assembly 70181 na Pfg00052 unplaced-scaffold na na BRKX01000052.1 <> na Primary Assembly 68908 na Pfg00053 unplaced-scaffold na na BRKX01000053.1 <> na Primary Assembly 67730 na Pfg00054 unplaced-scaffold na na BRKX01000054.1 <> na Primary Assembly 61662 na Pfg00055 unplaced-scaffold na na BRKX01000055.1 <> na Primary Assembly 51975 na Pfg00056 unplaced-scaffold na na BRKX01000056.1 <> na Primary Assembly 50901 na Pfg00057 unplaced-scaffold na na BRKX01000057.1 <> na Primary Assembly 49331 na Pfg00058 unplaced-scaffold na na BRKX01000058.1 <> na Primary Assembly 46421 na Pfg00059 unplaced-scaffold na na BRKX01000059.1 <> na Primary Assembly 45216 na Pfg00060 unplaced-scaffold na na BRKX01000060.1 <> na Primary Assembly 42925 na Pfg00061 unplaced-scaffold na na BRKX01000061.1 <> na Primary Assembly 41701 na Pfg00062 unplaced-scaffold na na BRKX01000062.1 <> na Primary Assembly 41066 na Pfg00063 unplaced-scaffold na na BRKX01000063.1 <> na Primary Assembly 39223 na Pfg00064 unplaced-scaffold na na BRKX01000064.1 <> na Primary Assembly 38553 na Pfg00065 unplaced-scaffold na na BRKX01000065.1 <> na Primary Assembly 37876 na Pfg00066 unplaced-scaffold na na BRKX01000066.1 <> na Primary Assembly 37150 na Pfg00067 unplaced-scaffold na na BRKX01000067.1 <> na Primary Assembly 34577 na Pfg00068 unplaced-scaffold na na BRKX01000068.1 <> na Primary Assembly 31285 na Pfg00069 unplaced-scaffold na na BRKX01000069.1 <> na Primary Assembly 26655 na Pfg00070 unplaced-scaffold na na BRKX01000070.1 <> na Primary Assembly 25150 na Pfg00071 unplaced-scaffold na na BRKX01000071.1 <> na Primary Assembly 8563 na