# Assembly name:  bColStr4.hap1
# Organism name:  Colius striatus (speckled mousebird)
# Isolate:  bColStr4
# Sex:  female
# Taxid:          57412
# BioSample:      SAMN33339572
# BioProject:     PRJNA936149
# Submitter:      Vertebrate Genomes Project
# Date:           2023-02-24
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JARBXP01
# Assembly method: HiFiasm + trio phasing v. 0.16.1 + galaxy2; Bionano Solve v. 3.7; salsa v. 2.3 + galaxy2
# Expected final version: no
# Genome coverage: 28.91x
# Sequencing technology: PacBio Sequel II HiFi; Bionano DLS; Arima Hi-C v2
# GenBank assembly accession: GCA_028858725.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_028858735.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	CM054345.1	<>	na	Primary Assembly	206588619	na
SUPER_2	assembled-molecule	2	Chromosome	CM054346.1	<>	na	Primary Assembly	122590939	na
SUPER_3	assembled-molecule	3	Chromosome	CM054347.1	<>	na	Primary Assembly	99866656	na
SUPER_4	assembled-molecule	4	Chromosome	CM054348.1	<>	na	Primary Assembly	97552025	na
SUPER_5	assembled-molecule	5	Chromosome	CM054349.1	<>	na	Primary Assembly	59131021	na
SUPER_6	assembled-molecule	6	Chromosome	CM054350.1	<>	na	Primary Assembly	47671338	na
SUPER_7	assembled-molecule	7	Chromosome	CM054351.1	<>	na	Primary Assembly	43798297	na
SUPER_8	assembled-molecule	8	Chromosome	CM054352.1	<>	na	Primary Assembly	39243326	na
SUPER_9	assembled-molecule	9	Chromosome	CM054353.1	<>	na	Primary Assembly	35251630	na
SUPER_10	assembled-molecule	10	Chromosome	CM054354.1	<>	na	Primary Assembly	34456810	na
SUPER_11	assembled-molecule	11	Chromosome	CM054355.1	<>	na	Primary Assembly	30181140	na
SUPER_12	assembled-molecule	12	Chromosome	CM054356.1	<>	na	Primary Assembly	28603071	na
SUPER_13	assembled-molecule	13	Chromosome	CM054357.1	<>	na	Primary Assembly	23139417	na
SUPER_14	assembled-molecule	14	Chromosome	CM054358.1	<>	na	Primary Assembly	22975093	na
SUPER_15	assembled-molecule	15	Chromosome	CM054359.1	<>	na	Primary Assembly	22727674	na
SUPER_16	assembled-molecule	16	Chromosome	CM054360.1	<>	na	Primary Assembly	17800485	na
SUPER_17	assembled-molecule	17	Chromosome	CM054361.1	<>	na	Primary Assembly	17044399	na
SUPER_18	assembled-molecule	18	Chromosome	CM054362.1	<>	na	Primary Assembly	12955907	na
SUPER_19	assembled-molecule	19	Chromosome	CM054363.1	<>	na	Primary Assembly	12933062	na
SUPER_20	assembled-molecule	20	Chromosome	CM054364.1	<>	na	Primary Assembly	12470069	na
SUPER_21	assembled-molecule	21	Chromosome	CM054365.1	<>	na	Primary Assembly	10365338	na
SUPER_22	assembled-molecule	22	Chromosome	CM054366.1	<>	na	Primary Assembly	9271640	na
SUPER_23	assembled-molecule	23	Chromosome	CM054367.1	<>	na	Primary Assembly	7213672	na
SUPER_24	assembled-molecule	24	Chromosome	CM054368.1	<>	na	Primary Assembly	6546072	na
SUPER_25	assembled-molecule	25	Chromosome	CM054369.1	<>	na	Primary Assembly	5816851	na
SUPER_26	assembled-molecule	26	Chromosome	CM054370.1	<>	na	Primary Assembly	4187400	na
SUPER_27	assembled-molecule	27	Chromosome	CM054371.1	<>	na	Primary Assembly	3703551	na
SUPER_28	assembled-molecule	28	Chromosome	CM054372.1	<>	na	Primary Assembly	3354660	na
SUPER_29	assembled-molecule	29	Chromosome	CM054373.1	<>	na	Primary Assembly	1997127	na
SUPER_30	assembled-molecule	30	Chromosome	CM054374.1	<>	na	Primary Assembly	867119	na
SUPER_W	assembled-molecule	W	Chromosome	CM054375.1	<>	na	Primary Assembly	42315177	na
SUPER_1_unloc_1	unlocalized-scaffold	1	Chromosome	JARBXP010000002.1	<>	na	Primary Assembly	52934	na
SUPER_3_unloc_1	unlocalized-scaffold	3	Chromosome	JARBXP010000005.1	<>	na	Primary Assembly	365620	na
SUPER_17_unloc_1	unlocalized-scaffold	17	Chromosome	JARBXP010000021.1	<>	na	Primary Assembly	68794	na
SUPER_17_unloc_2	unlocalized-scaffold	17	Chromosome	JARBXP010000022.1	<>	na	Primary Assembly	67460	na
SUPER_17_unloc_3	unlocalized-scaffold	17	Chromosome	JARBXP010000023.1	<>	na	Primary Assembly	67179	na
SUPER_22_unloc_1	unlocalized-scaffold	22	Chromosome	JARBXP010000029.1	<>	na	Primary Assembly	39156	na
SUPER_26_unloc_1	unlocalized-scaffold	26	Chromosome	JARBXP010000034.1	<>	na	Primary Assembly	197472	na
SUPER_26_unloc_2	unlocalized-scaffold	26	Chromosome	JARBXP010000035.1	<>	na	Primary Assembly	104912	na
scaffold_100	unplaced-scaffold	na	na	JARBXP010000177.1	<>	na	Primary Assembly	71085	na
scaffold_101	unplaced-scaffold	na	na	JARBXP010000057.1	<>	na	Primary Assembly	69772	na
scaffold_105	unplaced-scaffold	na	na	JARBXP010000090.1	<>	na	Primary Assembly	65594	na
scaffold_106	unplaced-scaffold	na	na	JARBXP010000128.1	<>	na	Primary Assembly	56964	na
scaffold_109	unplaced-scaffold	na	na	JARBXP010000067.1	<>	na	Primary Assembly	52588	na
scaffold_110	unplaced-scaffold	na	na	JARBXP010000125.1	<>	na	Primary Assembly	52366	na
scaffold_111	unplaced-scaffold	na	na	JARBXP010000065.1	<>	na	Primary Assembly	50638	na
scaffold_112	unplaced-scaffold	na	na	JARBXP010000152.1	<>	na	Primary Assembly	50301	na
scaffold_113	unplaced-scaffold	na	na	JARBXP010000078.1	<>	na	Primary Assembly	49552	na
scaffold_114	unplaced-scaffold	na	na	JARBXP010000062.1	<>	na	Primary Assembly	49280	na
scaffold_116	unplaced-scaffold	na	na	JARBXP010000099.1	<>	na	Primary Assembly	48350	na
scaffold_117	unplaced-scaffold	na	na	JARBXP010000182.1	<>	na	Primary Assembly	47873	na
scaffold_118	unplaced-scaffold	na	na	JARBXP010000189.1	<>	na	Primary Assembly	46063	na
scaffold_119	unplaced-scaffold	na	na	JARBXP010000092.1	<>	na	Primary Assembly	45962	na
scaffold_120	unplaced-scaffold	na	na	JARBXP010000041.1	<>	na	Primary Assembly	45931	na
scaffold_121	unplaced-scaffold	na	na	JARBXP010000171.1	<>	na	Primary Assembly	45507	na
scaffold_122	unplaced-scaffold	na	na	JARBXP010000068.1	<>	na	Primary Assembly	45154	na
scaffold_123	unplaced-scaffold	na	na	JARBXP010000167.1	<>	na	Primary Assembly	44801	na
scaffold_124	unplaced-scaffold	na	na	JARBXP010000153.1	<>	na	Primary Assembly	44584	na
scaffold_125	unplaced-scaffold	na	na	JARBXP010000105.1	<>	na	Primary Assembly	44364	na
scaffold_126	unplaced-scaffold	na	na	JARBXP010000160.1	<>	na	Primary Assembly	44099	na
scaffold_127	unplaced-scaffold	na	na	JARBXP010000051.1	<>	na	Primary Assembly	43682	na
scaffold_128	unplaced-scaffold	na	na	JARBXP010000183.1	<>	na	Primary Assembly	43158	na
scaffold_129	unplaced-scaffold	na	na	JARBXP010000113.1	<>	na	Primary Assembly	43153	na
scaffold_130	unplaced-scaffold	na	na	JARBXP010000111.1	<>	na	Primary Assembly	42234	na
scaffold_131	unplaced-scaffold	na	na	JARBXP010000040.1	<>	na	Primary Assembly	42085	na
scaffold_132	unplaced-scaffold	na	na	JARBXP010000184.1	<>	na	Primary Assembly	42083	na
scaffold_133	unplaced-scaffold	na	na	JARBXP010000046.1	<>	na	Primary Assembly	41705	na
scaffold_134	unplaced-scaffold	na	na	JARBXP010000157.1	<>	na	Primary Assembly	41059	na
scaffold_135	unplaced-scaffold	na	na	JARBXP010000080.1	<>	na	Primary Assembly	41035	na
scaffold_136	unplaced-scaffold	na	na	JARBXP010000050.1	<>	na	Primary Assembly	40684	na
scaffold_137	unplaced-scaffold	na	na	JARBXP010000129.1	<>	na	Primary Assembly	40487	na
scaffold_138	unplaced-scaffold	na	na	JARBXP010000140.1	<>	na	Primary Assembly	40398	na
scaffold_139	unplaced-scaffold	na	na	JARBXP010000045.1	<>	na	Primary Assembly	40386	na
scaffold_140	unplaced-scaffold	na	na	JARBXP010000121.1	<>	na	Primary Assembly	39841	na
scaffold_141	unplaced-scaffold	na	na	JARBXP010000073.1	<>	na	Primary Assembly	39416	na
scaffold_143	unplaced-scaffold	na	na	JARBXP010000054.1	<>	na	Primary Assembly	39012	na
scaffold_144	unplaced-scaffold	na	na	JARBXP010000137.1	<>	na	Primary Assembly	38958	na
scaffold_145	unplaced-scaffold	na	na	JARBXP010000176.1	<>	na	Primary Assembly	38781	na
scaffold_146	unplaced-scaffold	na	na	JARBXP010000085.1	<>	na	Primary Assembly	37522	na
scaffold_147	unplaced-scaffold	na	na	JARBXP010000130.1	<>	na	Primary Assembly	37474	na
scaffold_148	unplaced-scaffold	na	na	JARBXP010000146.1	<>	na	Primary Assembly	37404	na
scaffold_149	unplaced-scaffold	na	na	JARBXP010000181.1	<>	na	Primary Assembly	37243	na
scaffold_150	unplaced-scaffold	na	na	JARBXP010000061.1	<>	na	Primary Assembly	37229	na
scaffold_151	unplaced-scaffold	na	na	JARBXP010000149.1	<>	na	Primary Assembly	37184	na
scaffold_152	unplaced-scaffold	na	na	JARBXP010000077.1	<>	na	Primary Assembly	36916	na
scaffold_153	unplaced-scaffold	na	na	JARBXP010000186.1	<>	na	Primary Assembly	36881	na
scaffold_154	unplaced-scaffold	na	na	JARBXP010000084.1	<>	na	Primary Assembly	36747	na
scaffold_155	unplaced-scaffold	na	na	JARBXP010000179.1	<>	na	Primary Assembly	36641	na
scaffold_156	unplaced-scaffold	na	na	JARBXP010000083.1	<>	na	Primary Assembly	36451	na
scaffold_157	unplaced-scaffold	na	na	JARBXP010000047.1	<>	na	Primary Assembly	36097	na
scaffold_158	unplaced-scaffold	na	na	JARBXP010000096.1	<>	na	Primary Assembly	35584	na
scaffold_159	unplaced-scaffold	na	na	JARBXP010000172.1	<>	na	Primary Assembly	35143	na
scaffold_160	unplaced-scaffold	na	na	JARBXP010000145.1	<>	na	Primary Assembly	34931	na
scaffold_161	unplaced-scaffold	na	na	JARBXP010000102.1	<>	na	Primary Assembly	34780	na
scaffold_162	unplaced-scaffold	na	na	JARBXP010000142.1	<>	na	Primary Assembly	34670	na
scaffold_163	unplaced-scaffold	na	na	JARBXP010000089.1	<>	na	Primary Assembly	34108	na
scaffold_164	unplaced-scaffold	na	na	JARBXP010000109.1	<>	na	Primary Assembly	33898	na
scaffold_165	unplaced-scaffold	na	na	JARBXP010000060.1	<>	na	Primary Assembly	33876	na
scaffold_166	unplaced-scaffold	na	na	JARBXP010000088.1	<>	na	Primary Assembly	33827	na
scaffold_167	unplaced-scaffold	na	na	JARBXP010000049.1	<>	na	Primary Assembly	33723	na
scaffold_168	unplaced-scaffold	na	na	JARBXP010000116.1	<>	na	Primary Assembly	33498	na
scaffold_169	unplaced-scaffold	na	na	JARBXP010000185.1	<>	na	Primary Assembly	32621	na
scaffold_170	unplaced-scaffold	na	na	JARBXP010000091.1	<>	na	Primary Assembly	32361	na
scaffold_171	unplaced-scaffold	na	na	JARBXP010000187.1	<>	na	Primary Assembly	32107	na
scaffold_172	unplaced-scaffold	na	na	JARBXP010000115.1	<>	na	Primary Assembly	31867	na
scaffold_173	unplaced-scaffold	na	na	JARBXP010000053.1	<>	na	Primary Assembly	31780	na
scaffold_174	unplaced-scaffold	na	na	JARBXP010000122.1	<>	na	Primary Assembly	31653	na
scaffold_175	unplaced-scaffold	na	na	JARBXP010000175.1	<>	na	Primary Assembly	31349	na
scaffold_176	unplaced-scaffold	na	na	JARBXP010000134.1	<>	na	Primary Assembly	31171	na
scaffold_177	unplaced-scaffold	na	na	JARBXP010000044.1	<>	na	Primary Assembly	31117	na
scaffold_178	unplaced-scaffold	na	na	JARBXP010000112.1	<>	na	Primary Assembly	31079	na
scaffold_179	unplaced-scaffold	na	na	JARBXP010000069.1	<>	na	Primary Assembly	30663	na
scaffold_180	unplaced-scaffold	na	na	JARBXP010000120.1	<>	na	Primary Assembly	30658	na
scaffold_181	unplaced-scaffold	na	na	JARBXP010000169.1	<>	na	Primary Assembly	29970	na
scaffold_182	unplaced-scaffold	na	na	JARBXP010000079.1	<>	na	Primary Assembly	29773	na
scaffold_183	unplaced-scaffold	na	na	JARBXP010000163.1	<>	na	Primary Assembly	29714	na
scaffold_184	unplaced-scaffold	na	na	JARBXP010000164.1	<>	na	Primary Assembly	29666	na
scaffold_185	unplaced-scaffold	na	na	JARBXP010000081.1	<>	na	Primary Assembly	28784	na
scaffold_186	unplaced-scaffold	na	na	JARBXP010000058.1	<>	na	Primary Assembly	28642	na
scaffold_187	unplaced-scaffold	na	na	JARBXP010000143.1	<>	na	Primary Assembly	28348	na
scaffold_188	unplaced-scaffold	na	na	JARBXP010000117.1	<>	na	Primary Assembly	28248	na
scaffold_189	unplaced-scaffold	na	na	JARBXP010000052.1	<>	na	Primary Assembly	28236	na
scaffold_190	unplaced-scaffold	na	na	JARBXP010000095.1	<>	na	Primary Assembly	28027	na
scaffold_191	unplaced-scaffold	na	na	JARBXP010000178.1	<>	na	Primary Assembly	27859	na
scaffold_192	unplaced-scaffold	na	na	JARBXP010000093.1	<>	na	Primary Assembly	27810	na
scaffold_193	unplaced-scaffold	na	na	JARBXP010000162.1	<>	na	Primary Assembly	27734	na
scaffold_194	unplaced-scaffold	na	na	JARBXP010000098.1	<>	na	Primary Assembly	27675	na
scaffold_195	unplaced-scaffold	na	na	JARBXP010000173.1	<>	na	Primary Assembly	27630	na
scaffold_196	unplaced-scaffold	na	na	JARBXP010000076.1	<>	na	Primary Assembly	27568	na
scaffold_197	unplaced-scaffold	na	na	JARBXP010000141.1	<>	na	Primary Assembly	27546	na
scaffold_198	unplaced-scaffold	na	na	JARBXP010000136.1	<>	na	Primary Assembly	27344	na
scaffold_199	unplaced-scaffold	na	na	JARBXP010000066.1	<>	na	Primary Assembly	27048	na
scaffold_200	unplaced-scaffold	na	na	JARBXP010000048.1	<>	na	Primary Assembly	26764	na
scaffold_201	unplaced-scaffold	na	na	JARBXP010000097.1	<>	na	Primary Assembly	26751	na
scaffold_202	unplaced-scaffold	na	na	JARBXP010000151.1	<>	na	Primary Assembly	26686	na
scaffold_203	unplaced-scaffold	na	na	JARBXP010000055.1	<>	na	Primary Assembly	26677	na
scaffold_204	unplaced-scaffold	na	na	JARBXP010000150.1	<>	na	Primary Assembly	26606	na
scaffold_205	unplaced-scaffold	na	na	JARBXP010000108.1	<>	na	Primary Assembly	26539	na
scaffold_206	unplaced-scaffold	na	na	JARBXP010000133.1	<>	na	Primary Assembly	25916	na
scaffold_207	unplaced-scaffold	na	na	JARBXP010000059.1	<>	na	Primary Assembly	25058	na
scaffold_208	unplaced-scaffold	na	na	JARBXP010000094.1	<>	na	Primary Assembly	25012	na
scaffold_209	unplaced-scaffold	na	na	JARBXP010000168.1	<>	na	Primary Assembly	24037	na
scaffold_210	unplaced-scaffold	na	na	JARBXP010000075.1	<>	na	Primary Assembly	23642	na
scaffold_211	unplaced-scaffold	na	na	JARBXP010000155.1	<>	na	Primary Assembly	23510	na
scaffold_212	unplaced-scaffold	na	na	JARBXP010000106.1	<>	na	Primary Assembly	23021	na
scaffold_213	unplaced-scaffold	na	na	JARBXP010000154.1	<>	na	Primary Assembly	22464	na
scaffold_214	unplaced-scaffold	na	na	JARBXP010000101.1	<>	na	Primary Assembly	22122	na
scaffold_215	unplaced-scaffold	na	na	JARBXP010000161.1	<>	na	Primary Assembly	21750	na
scaffold_216	unplaced-scaffold	na	na	JARBXP010000118.1	<>	na	Primary Assembly	21329	na
scaffold_217	unplaced-scaffold	na	na	JARBXP010000180.1	<>	na	Primary Assembly	20908	na
scaffold_218	unplaced-scaffold	na	na	JARBXP010000087.1	<>	na	Primary Assembly	20896	na
scaffold_219	unplaced-scaffold	na	na	JARBXP010000132.1	<>	na	Primary Assembly	20181	na
scaffold_220	unplaced-scaffold	na	na	JARBXP010000138.1	<>	na	Primary Assembly	18989	na
scaffold_221	unplaced-scaffold	na	na	JARBXP010000174.1	<>	na	Primary Assembly	18684	na
scaffold_222	unplaced-scaffold	na	na	JARBXP010000119.1	<>	na	Primary Assembly	18450	na
scaffold_223	unplaced-scaffold	na	na	JARBXP010000043.1	<>	na	Primary Assembly	16873	na
scaffold_224	unplaced-scaffold	na	na	JARBXP010000110.1	<>	na	Primary Assembly	16755	na
scaffold_225	unplaced-scaffold	na	na	JARBXP010000166.1	<>	na	Primary Assembly	15396	na
scaffold_226	unplaced-scaffold	na	na	JARBXP010000086.1	<>	na	Primary Assembly	14693	na
scaffold_227	unplaced-scaffold	na	na	JARBXP010000070.1	<>	na	Primary Assembly	12990	na
scaffold_34	unplaced-scaffold	na	na	JARBXP010000124.1	<>	na	Primary Assembly	3611914	na
scaffold_35	unplaced-scaffold	na	na	JARBXP010000165.1	<>	na	Primary Assembly	3146529	na
scaffold_36	unplaced-scaffold	na	na	JARBXP010000114.1	<>	na	Primary Assembly	2779323	na
scaffold_37	unplaced-scaffold	na	na	JARBXP010000170.1	<>	na	Primary Assembly	2699708	na
scaffold_38	unplaced-scaffold	na	na	JARBXP010000071.1	<>	na	Primary Assembly	2639154	na
scaffold_40	unplaced-scaffold	na	na	JARBXP010000056.1	<>	na	Primary Assembly	2465505	na
scaffold_43	unplaced-scaffold	na	na	JARBXP010000064.1	<>	na	Primary Assembly	1919763	na
scaffold_44	unplaced-scaffold	na	na	JARBXP010000158.1	<>	na	Primary Assembly	1882691	na
scaffold_45	unplaced-scaffold	na	na	JARBXP010000072.1	<>	na	Primary Assembly	1791432	na
scaffold_46	unplaced-scaffold	na	na	JARBXP010000123.1	<>	na	Primary Assembly	1742421	na
scaffold_47	unplaced-scaffold	na	na	JARBXP010000188.1	<>	na	Primary Assembly	1594039	na
scaffold_48	unplaced-scaffold	na	na	JARBXP010000127.1	<>	na	Primary Assembly	1592523	na
scaffold_54	unplaced-scaffold	na	na	JARBXP010000131.1	<>	na	Primary Assembly	971453	na
scaffold_55	unplaced-scaffold	na	na	JARBXP010000103.1	<>	na	Primary Assembly	966858	na
scaffold_56	unplaced-scaffold	na	na	JARBXP010000159.1	<>	na	Primary Assembly	922348	na
scaffold_59	unplaced-scaffold	na	na	JARBXP010000126.1	<>	na	Primary Assembly	784747	na
scaffold_60	unplaced-scaffold	na	na	JARBXP010000139.1	<>	na	Primary Assembly	774221	na
scaffold_63	unplaced-scaffold	na	na	JARBXP010000042.1	<>	na	Primary Assembly	704152	na
scaffold_65	unplaced-scaffold	na	na	JARBXP010000063.1	<>	na	Primary Assembly	682570	na
scaffold_68	unplaced-scaffold	na	na	JARBXP010000135.1	<>	na	Primary Assembly	568591	na
scaffold_76	unplaced-scaffold	na	na	JARBXP010000100.1	<>	na	Primary Assembly	329315	na
scaffold_79	unplaced-scaffold	na	na	JARBXP010000147.1	<>	na	Primary Assembly	266293	na
scaffold_84	unplaced-scaffold	na	na	JARBXP010000148.1	<>	na	Primary Assembly	190752	na
scaffold_85	unplaced-scaffold	na	na	JARBXP010000082.1	<>	na	Primary Assembly	163092	na
scaffold_86	unplaced-scaffold	na	na	JARBXP010000107.1	<>	na	Primary Assembly	151495	na
scaffold_93	unplaced-scaffold	na	na	JARBXP010000144.1	<>	na	Primary Assembly	97696	na
scaffold_94	unplaced-scaffold	na	na	JARBXP010000104.1	<>	na	Primary Assembly	96045	na
scaffold_96	unplaced-scaffold	na	na	JARBXP010000156.1	<>	na	Primary Assembly	84982	na
scaffold_97	unplaced-scaffold	na	na	JARBXP010000074.1	<>	na	Primary Assembly	78732	na