# Assembly name: HG03942_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03942 # Sex: male # Taxid: 9606 # BioSample: SAMN26267387 # BioProject: PRJNA1157246 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIGT01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 71x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036275.1 # Linked assembly: GCA_042036505.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042036315.1 Primary Assembly ## GCA_042036335.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03942#2#h2tg000017l assembled-molecule 3 Chromosome CM088401.1 <> na Primary Assembly 200459214 na HG03942#2#h2tg000003l assembled-molecule 4 Chromosome CM088402.1 <> na Primary Assembly 193104438 na HG03942#2#h2tg000012l assembled-molecule 5 Chromosome CM088403.1 <> na Primary Assembly 184108701 na HG03942#2#h2tg000010l assembled-molecule 6 Chromosome CM088404.1 <> na Primary Assembly 171682966 na HG03942#2#h2tg000002l assembled-molecule 7 Chromosome CM088405.1 <> na Primary Assembly 160269392 na HG03942#2#h2tg000025l assembled-molecule 8 Chromosome CM088406.1 <> na Primary Assembly 145867891 na HG03942#2#h2tg000004l assembled-molecule 10 Chromosome CM088407.1 <> na Primary Assembly 135154786 na HG03942#2#h2tg000020l assembled-molecule 11 Chromosome CM088408.1 <> na Primary Assembly 134237001 na HG03942#2#h2tg000011l assembled-molecule 12 Chromosome CM088409.1 <> na Primary Assembly 133115018 na HG03942#2#h2tg000024l assembled-molecule 16 Chromosome CM088410.1 <> na Primary Assembly 92225398 na HG03942#2#h2tg000018l assembled-molecule 19 Chromosome CM088411.1 <> na Primary Assembly 61067369 na HG03942#2#h2tg000001l unplaced-scaffold na na JBHIGT010000001.1 <> na Primary Assembly 240220980 na HG03942#2#h2tg000005l unplaced-scaffold na na JBHIGT010000004.1 <> na Primary Assembly 50293649 na HG03942#2#h2tg000006l unplaced-scaffold na na JBHIGT010000005.1 <> na Primary Assembly 99309974 na HG03942#2#h2tg000007l unplaced-scaffold na na JBHIGT010000006.1 <> na Primary Assembly 88923320 na HG03942#2#h2tg000008l unplaced-scaffold na na JBHIGT010000007.1 <> na Primary Assembly 57733532 na HG03942#2#h2tg000009l unplaced-scaffold na na JBHIGT010000008.1 <> na Primary Assembly 68540158 na HG03942#2#h2tg000013l unplaced-scaffold na na JBHIGT010000011.1 <> na Primary Assembly 92000503 na HG03942#2#h2tg000014l unplaced-scaffold na na JBHIGT010000012.1 <> na Primary Assembly 80068187 na HG03942#2#h2tg000015l unplaced-scaffold na na JBHIGT010000013.1 <> na Primary Assembly 71738175 na HG03942#2#h2tg000019l unplaced-scaffold na na JBHIGT010000014.1 <> na Primary Assembly 152435659 na HG03942#2#h2tg000022l unplaced-scaffold na na JBHIGT010000016.1 <> na Primary Assembly 39662717 na HG03942#2#h2tg000026l unplaced-scaffold na na JBHIGT010000018.1 <> na Primary Assembly 61922422 na HG03942#2#h2tg000027l unplaced-scaffold na na JBHIGT010000019.1 <> na Primary Assembly 17623480 na HG03942#2#h2tg000029l unplaced-scaffold na na JBHIGT010000020.1 <> na Primary Assembly 6291579 na HG03942#2#h2tg000036l unplaced-scaffold na na JBHIGT010000021.1 <> na Primary Assembly 69489 na HG03942#2#h2tg000038l unplaced-scaffold na na JBHIGT010000022.1 <> na Primary Assembly 3593889 na HG03942#2#h2tg000040l unplaced-scaffold na na JBHIGT010000023.1 <> na Primary Assembly 926145 na HG03942#2#h2tg000041l unplaced-scaffold na na JBHIGT010000024.1 <> na Primary Assembly 275720 na HG03942#2#h2tg000042l unplaced-scaffold na na JBHIGT010000025.1 <> na Primary Assembly 69715 na HG03942#2#h2tg000045l unplaced-scaffold na na JBHIGT010000026.1 <> na Primary Assembly 174014 na HG03942#2#h2tg000046l unplaced-scaffold na na JBHIGT010000027.1 <> na Primary Assembly 1026578 na HG03942#2#h2tg000049l unplaced-scaffold na na JBHIGT010000028.1 <> na Primary Assembly 179588 na HG03942#2#h2tg000055l unplaced-scaffold na na JBHIGT010000029.1 <> na Primary Assembly 107002 na HG03942#2#h2tg000058l unplaced-scaffold na na JBHIGT010000030.1 <> na Primary Assembly 113664 na HG03942#2#h2tg000061l unplaced-scaffold na na JBHIGT010000031.1 <> na Primary Assembly 302531 na HG03942#2#h2tg000062l unplaced-scaffold na na JBHIGT010000032.1 <> na Primary Assembly 289418 na HG03942#2#h2tg000063l unplaced-scaffold na na JBHIGT010000033.1 <> na Primary Assembly 156099 na HG03942#2#h2tg000065l unplaced-scaffold na na JBHIGT010000034.1 <> na Primary Assembly 89113 na HG03942#2#h2tg000066l unplaced-scaffold na na JBHIGT010000035.1 <> na Primary Assembly 65287 na HG03942#2#h2tg000067l unplaced-scaffold na na JBHIGT010000036.1 <> na Primary Assembly 94435 na HG03942#2#h2tg000068l unplaced-scaffold na na JBHIGT010000037.1 <> na Primary Assembly 868785 na HG03942#2#h2tg000077l unplaced-scaffold na na JBHIGT010000038.1 <> na Primary Assembly 131663 na HG03942#2#h2tg000083l unplaced-scaffold na na JBHIGT010000039.1 <> na Primary Assembly 86651 na HG03942#2#h2tg000084l unplaced-scaffold na na JBHIGT010000040.1 <> na Primary Assembly 168109 na HG03942#2#h2tg000085l unplaced-scaffold na na JBHIGT010000041.1 <> na Primary Assembly 175364 na HG03942#2#h2tg000090l unplaced-scaffold na na JBHIGT010000042.1 <> na Primary Assembly 153849 na HG03942#2#h2tg000092l unplaced-scaffold na na JBHIGT010000043.1 <> na Primary Assembly 72638 na HG03942#2#h2tg000093l unplaced-scaffold na na JBHIGT010000044.1 <> na Primary Assembly 150673 na HG03942#2#h2tg000095l unplaced-scaffold na na JBHIGT010000045.1 <> na Primary Assembly 210005 na HG03942#2#h2tg000096l unplaced-scaffold na na JBHIGT010000046.1 <> na Primary Assembly 146002 na HG03942#2#h2tg000099l unplaced-scaffold na na JBHIGT010000047.1 <> na Primary Assembly 54718 na HG03942#2#h2tg000100l unplaced-scaffold na na JBHIGT010000048.1 <> na Primary Assembly 112171 na HG03942#2#h2tg000103l unplaced-scaffold na na JBHIGT010000049.1 <> na Primary Assembly 55032 na HG03942#2#h2tg000104l unplaced-scaffold na na JBHIGT010000050.1 <> na Primary Assembly 84480 na HG03942#2#h2tg000105l unplaced-scaffold na na JBHIGT010000051.1 <> na Primary Assembly 108091 na HG03942#2#h2tg000107l unplaced-scaffold na na JBHIGT010000052.1 <> na Primary Assembly 213368 na HG03942#2#h2tg000118l unplaced-scaffold na na JBHIGT010000053.1 <> na Primary Assembly 59860 na HG03942#2#h2tg000016l unplaced-scaffold na na JBHIGT010000056.1 <> na Primary Assembly 72794545 na HG03942#2#h2tg000021l unplaced-scaffold na na JBHIGT010000059.1 <> na Primary Assembly 50463981 na HG03942#2#h2tg000023l unplaced-scaffold na na JBHIGT010000060.1 <> na Primary Assembly 249302 na HG03942#2#h2tg000028l unplaced-scaffold na na JBHIGT010000062.1 <> na Primary Assembly 57208127 na HG03942#2#h2tg000030l unplaced-scaffold na na JBHIGT010000063.1 <> na Primary Assembly 38437780 na HG03942#2#h2tg000031l unplaced-scaffold na na JBHIGT010000064.1 <> na Primary Assembly 1144702 na HG03942#2#h2tg000032l unplaced-scaffold na na JBHIGT010000065.1 <> na Primary Assembly 128030 na HG03942#2#h2tg000033l unplaced-scaffold na na JBHIGT010000066.1 <> na Primary Assembly 26485556 na HG03942#2#h2tg000034l unplaced-scaffold na na JBHIGT010000067.1 <> na Primary Assembly 27455375 na HG03942#2#h2tg000035l unplaced-scaffold na na JBHIGT010000068.1 <> na Primary Assembly 2242267 na HG03942#2#h2tg000037l unplaced-scaffold na na JBHIGT010000069.1 <> na Primary Assembly 203700 na HG03942#2#h2tg000039l unplaced-scaffold na na JBHIGT010000070.1 <> na Primary Assembly 2891700 na HG03942#2#h2tg000043l unplaced-scaffold na na JBHIGT010000071.1 <> na Primary Assembly 180989 na HG03942#2#h2tg000044l unplaced-scaffold na na JBHIGT010000072.1 <> na Primary Assembly 2844873 na HG03942#2#h2tg000047l unplaced-scaffold na na JBHIGT010000073.1 <> na Primary Assembly 376133 na HG03942#2#h2tg000048l unplaced-scaffold na na JBHIGT010000074.1 <> na Primary Assembly 2065049 na HG03942#2#h2tg000050l unplaced-scaffold na na JBHIGT010000075.1 <> na Primary Assembly 189327 na HG03942#2#h2tg000051l unplaced-scaffold na na JBHIGT010000076.1 <> na Primary Assembly 658894 na HG03942#2#h2tg000052l unplaced-scaffold na na JBHIGT010000077.1 <> na Primary Assembly 1573869 na HG03942#2#h2tg000054l unplaced-scaffold na na JBHIGT010000078.1 <> na Primary Assembly 198808 na HG03942#2#h2tg000057l unplaced-scaffold na na JBHIGT010000079.1 <> na Primary Assembly 52321 na HG03942#2#h2tg000059l unplaced-scaffold na na JBHIGT010000080.1 <> na Primary Assembly 53733 na HG03942#2#h2tg000060l unplaced-scaffold na na JBHIGT010000081.1 <> na Primary Assembly 219378 na HG03942#2#h2tg000064l unplaced-scaffold na na JBHIGT010000082.1 <> na Primary Assembly 187348 na HG03942#2#h2tg000069l unplaced-scaffold na na JBHIGT010000083.1 <> na Primary Assembly 232403 na HG03942#2#h2tg000070l unplaced-scaffold na na JBHIGT010000084.1 <> na Primary Assembly 417117 na HG03942#2#h2tg000071l unplaced-scaffold na na JBHIGT010000085.1 <> na Primary Assembly 86045 na HG03942#2#h2tg000072l unplaced-scaffold na na JBHIGT010000086.1 <> na Primary Assembly 239851 na HG03942#2#h2tg000073l unplaced-scaffold na na JBHIGT010000087.1 <> na Primary Assembly 125925 na HG03942#2#h2tg000075l unplaced-scaffold na na JBHIGT010000088.1 <> na Primary Assembly 166104 na HG03942#2#h2tg000079l unplaced-scaffold na na JBHIGT010000089.1 <> na Primary Assembly 50100 na HG03942#2#h2tg000080l unplaced-scaffold na na JBHIGT010000090.1 <> na Primary Assembly 83852 na HG03942#2#h2tg000081l unplaced-scaffold na na JBHIGT010000091.1 <> na Primary Assembly 97158 na HG03942#2#h2tg000082l unplaced-scaffold na na JBHIGT010000092.1 <> na Primary Assembly 68447 na HG03942#2#h2tg000088l unplaced-scaffold na na JBHIGT010000093.1 <> na Primary Assembly 113476 na HG03942#2#h2tg000089l unplaced-scaffold na na JBHIGT010000094.1 <> na Primary Assembly 205114 na HG03942#2#h2tg000091l unplaced-scaffold na na JBHIGT010000095.1 <> na Primary Assembly 60291 na HG03942#2#h2tg000094l unplaced-scaffold na na JBHIGT010000096.1 <> na Primary Assembly 81194 na HG03942#2#h2tg000097l unplaced-scaffold na na JBHIGT010000097.1 <> na Primary Assembly 94468 na HG03942#2#h2tg000102l unplaced-scaffold na na JBHIGT010000098.1 <> na Primary Assembly 52061 na HG03942#2#h2tg000106l unplaced-scaffold na na JBHIGT010000099.1 <> na Primary Assembly 50764 na HG03942#2#h2tg000108l unplaced-scaffold na na JBHIGT010000100.1 <> na Primary Assembly 179820 na HG03942#2#h2tg000111l unplaced-scaffold na na JBHIGT010000101.1 <> na Primary Assembly 83761 na HG03942#2#h2tg000114l unplaced-scaffold na na JBHIGT010000102.1 <> na Primary Assembly 69991 na HG03942#2#atg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHIGT010000103.1 <> na non-nuclear 16569 na