# Assembly name: HG03804_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03804 # Sex: female # Taxid: 9606 # BioSample: SAMN37706907 # BioProject: PRJNA1157244 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIGR01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 70x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036285.1 # Linked assembly: GCA_042036515.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042036345.1 Primary Assembly ## GCA_042036375.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03804#2#h2tg000005l assembled-molecule 2 Chromosome CM088376.1 <> na Primary Assembly 241523403 na HG03804#2#h2tg000011l assembled-molecule 3 Chromosome CM088377.1 <> na Primary Assembly 201377313 na HG03804#2#h2tg000009l assembled-molecule 4 Chromosome CM088378.1 <> na Primary Assembly 193513121 na HG03804#2#h2tg000012l assembled-molecule 6 Chromosome CM088379.1 <> na Primary Assembly 171482174 na HG03804#2#h2tg000025l assembled-molecule 7 Chromosome CM088380.1 <> na Primary Assembly 160408295 na HG03804#2#h2tg000006l assembled-molecule 8 Chromosome CM088381.1 <> na Primary Assembly 145343551 na HG03804#2#h2tg000015l assembled-molecule 9 Chromosome CM088382.1 <> na Primary Assembly 139467863 na HG03804#2#h2tg000002l assembled-molecule 10 Chromosome CM088383.1 <> na Primary Assembly 135650891 na HG03804#2#h2tg000004l assembled-molecule 11 Chromosome CM088384.1 <> na Primary Assembly 136484611 na HG03804#2#h2tg000021l assembled-molecule 12 Chromosome CM088385.1 <> na Primary Assembly 132953406 na HG03804#2#h2tg000013l assembled-molecule 16 Chromosome CM088386.1 <> na Primary Assembly 91229310 na HG03804#2#h2tg000010l assembled-molecule 19 Chromosome CM088387.1 <> na Primary Assembly 64877713 na HG03804#2#h2tg000016l assembled-molecule 20 Chromosome CM088388.1 <> na Primary Assembly 65962692 na HG03804#2#h2tg000018l assembled-molecule X Chromosome CM088389.1 <> na Primary Assembly 154170577 na HG03804#2#h2tg000007l unplaced-scaffold na na JBHIGR010000004.1 <> na Primary Assembly 130919272 na HG03804#2#h2tg000008l unplaced-scaffold na na JBHIGR010000005.1 <> na Primary Assembly 183536911 na HG03804#2#h2tg000014l unplaced-scaffold na na JBHIGR010000010.1 <> na Primary Assembly 96023048 na HG03804#2#h2tg000017l unplaced-scaffold na na JBHIGR010000012.1 <> na Primary Assembly 17969060 na HG03804#2#h2tg000019l unplaced-scaffold na na JBHIGR010000013.1 <> na Primary Assembly 99385214 na HG03804#2#h2tg000024l unplaced-scaffold na na JBHIGR010000015.1 <> na Primary Assembly 6548668 na HG03804#2#h2tg000027l unplaced-scaffold na na JBHIGR010000017.1 <> na Primary Assembly 103215685 na HG03804#2#h2tg000028l unplaced-scaffold na na JBHIGR010000018.1 <> na Primary Assembly 213656 na HG03804#2#h2tg000030l unplaced-scaffold na na JBHIGR010000019.1 <> na Primary Assembly 45854106 na HG03804#2#h2tg000033l unplaced-scaffold na na JBHIGR010000020.1 <> na Primary Assembly 1360096 na HG03804#2#h2tg000034l unplaced-scaffold na na JBHIGR010000021.1 <> na Primary Assembly 4101816 na HG03804#2#h2tg000036l unplaced-scaffold na na JBHIGR010000022.1 <> na Primary Assembly 186036 na HG03804#2#h2tg000037l unplaced-scaffold na na JBHIGR010000023.1 <> na Primary Assembly 126951 na HG03804#2#h2tg000039l unplaced-scaffold na na JBHIGR010000024.1 <> na Primary Assembly 158927 na HG03804#2#h2tg000041l unplaced-scaffold na na JBHIGR010000025.1 <> na Primary Assembly 579160 na HG03804#2#h2tg000042l unplaced-scaffold na na JBHIGR010000026.1 <> na Primary Assembly 153709 na HG03804#2#h2tg000046l unplaced-scaffold na na JBHIGR010000027.1 <> na Primary Assembly 315941 na HG03804#2#h2tg000047l unplaced-scaffold na na JBHIGR010000028.1 <> na Primary Assembly 914596 na HG03804#2#h2tg000048l unplaced-scaffold na na JBHIGR010000029.1 <> na Primary Assembly 327811 na HG03804#2#h2tg000049l unplaced-scaffold na na JBHIGR010000030.1 <> na Primary Assembly 295352 na HG03804#2#h2tg000050l unplaced-scaffold na na JBHIGR010000031.1 <> na Primary Assembly 260604 na HG03804#2#h2tg000054l unplaced-scaffold na na JBHIGR010000032.1 <> na Primary Assembly 284489 na HG03804#2#h2tg000058l unplaced-scaffold na na JBHIGR010000033.1 <> na Primary Assembly 243188 na HG03804#2#h2tg000059l unplaced-scaffold na na JBHIGR010000034.1 <> na Primary Assembly 69786 na HG03804#2#h2tg000060l unplaced-scaffold na na JBHIGR010000035.1 <> na Primary Assembly 363783 na HG03804#2#h2tg000062l unplaced-scaffold na na JBHIGR010000036.1 <> na Primary Assembly 173946 na HG03804#2#h2tg000064l unplaced-scaffold na na JBHIGR010000037.1 <> na Primary Assembly 295611 na HG03804#2#h2tg000067l unplaced-scaffold na na JBHIGR010000038.1 <> na Primary Assembly 224095 na HG03804#2#h2tg000068l unplaced-scaffold na na JBHIGR010000039.1 <> na Primary Assembly 126306 na HG03804#2#h2tg000071l unplaced-scaffold na na JBHIGR010000040.1 <> na Primary Assembly 382581 na HG03804#2#h2tg000072l unplaced-scaffold na na JBHIGR010000041.1 <> na Primary Assembly 84978 na HG03804#2#h2tg000078l unplaced-scaffold na na JBHIGR010000042.1 <> na Primary Assembly 150121 na HG03804#2#h2tg000084l unplaced-scaffold na na JBHIGR010000043.1 <> na Primary Assembly 86782 na HG03804#2#h2tg000086l unplaced-scaffold na na JBHIGR010000044.1 <> na Primary Assembly 154077 na HG03804#2#h2tg000090l unplaced-scaffold na na JBHIGR010000045.1 <> na Primary Assembly 89594 na HG03804#2#h2tg000091l unplaced-scaffold na na JBHIGR010000046.1 <> na Primary Assembly 70955 na HG03804#2#h2tg000098l unplaced-scaffold na na JBHIGR010000047.1 <> na Primary Assembly 122568 na HG03804#2#h2tg000099l unplaced-scaffold na na JBHIGR010000048.1 <> na Primary Assembly 269497 na HG03804#2#h2tg000108l unplaced-scaffold na na JBHIGR010000049.1 <> na Primary Assembly 216535 na HG03804#2#h2tg000111l unplaced-scaffold na na JBHIGR010000050.1 <> na Primary Assembly 233471 na HG03804#2#h2tg000116l unplaced-scaffold na na JBHIGR010000051.1 <> na Primary Assembly 59803 na HG03804#2#h2tg000123l unplaced-scaffold na na JBHIGR010000052.1 <> na Primary Assembly 147290 na HG03804#2#h2tg000134l unplaced-scaffold na na JBHIGR010000053.1 <> na Primary Assembly 51611 na HG03804#2#h2tg000139l unplaced-scaffold na na JBHIGR010000054.1 <> na Primary Assembly 218942 na HG03804#2#h2tg000150l unplaced-scaffold na na JBHIGR010000055.1 <> na Primary Assembly 58016 na HG03804#2#h2tg000001l unplaced-scaffold na na JBHIGR010000056.1 <> na Primary Assembly 62412095 na HG03804#2#h2tg000003l unplaced-scaffold na na JBHIGR010000057.1 <> na Primary Assembly 106883395 na HG03804#2#h2tg000020l unplaced-scaffold na na JBHIGR010000062.1 <> na Primary Assembly 3462676 na HG03804#2#h2tg000022l unplaced-scaffold na na JBHIGR010000063.1 <> na Primary Assembly 64140649 na HG03804#2#h2tg000023l unplaced-scaffold na na JBHIGR010000064.1 <> na Primary Assembly 41198812 na HG03804#2#h2tg000026l unplaced-scaffold na na JBHIGR010000065.1 <> na Primary Assembly 5466922 na HG03804#2#h2tg000029l unplaced-scaffold na na JBHIGR010000066.1 <> na Primary Assembly 216053 na HG03804#2#h2tg000031l unplaced-scaffold na na JBHIGR010000067.1 <> na Primary Assembly 18991253 na HG03804#2#h2tg000032l unplaced-scaffold na na JBHIGR010000068.1 <> na Primary Assembly 2843020 na HG03804#2#h2tg000035l unplaced-scaffold na na JBHIGR010000069.1 <> na Primary Assembly 627191 na HG03804#2#h2tg000038l unplaced-scaffold na na JBHIGR010000070.1 <> na Primary Assembly 597566 na HG03804#2#h2tg000040l unplaced-scaffold na na JBHIGR010000071.1 <> na Primary Assembly 820917 na HG03804#2#h2tg000043l unplaced-scaffold na na JBHIGR010000072.1 <> na Primary Assembly 1748100 na HG03804#2#h2tg000044l unplaced-scaffold na na JBHIGR010000073.1 <> na Primary Assembly 1447426 na HG03804#2#h2tg000045l unplaced-scaffold na na JBHIGR010000074.1 <> na Primary Assembly 2952295 na HG03804#2#h2tg000052l unplaced-scaffold na na JBHIGR010000075.1 <> na Primary Assembly 246927 na HG03804#2#h2tg000053l unplaced-scaffold na na JBHIGR010000076.1 <> na Primary Assembly 236771 na HG03804#2#h2tg000057l unplaced-scaffold na na JBHIGR010000077.1 <> na Primary Assembly 411960 na HG03804#2#h2tg000061l unplaced-scaffold na na JBHIGR010000078.1 <> na Primary Assembly 134828 na HG03804#2#h2tg000063l unplaced-scaffold na na JBHIGR010000079.1 <> na Primary Assembly 393755 na HG03804#2#h2tg000065l unplaced-scaffold na na JBHIGR010000080.1 <> na Primary Assembly 115048 na HG03804#2#h2tg000066l unplaced-scaffold na na JBHIGR010000081.1 <> na Primary Assembly 243767 na HG03804#2#h2tg000070l unplaced-scaffold na na JBHIGR010000082.1 <> na Primary Assembly 89914 na HG03804#2#h2tg000073l unplaced-scaffold na na JBHIGR010000083.1 <> na Primary Assembly 146124 na HG03804#2#h2tg000075l unplaced-scaffold na na JBHIGR010000084.1 <> na Primary Assembly 61214 na HG03804#2#h2tg000077l unplaced-scaffold na na JBHIGR010000085.1 <> na Primary Assembly 206824 na HG03804#2#h2tg000079l unplaced-scaffold na na JBHIGR010000086.1 <> na Primary Assembly 220691 na HG03804#2#h2tg000080l unplaced-scaffold na na JBHIGR010000087.1 <> na Primary Assembly 160269 na HG03804#2#h2tg000081l unplaced-scaffold na na JBHIGR010000088.1 <> na Primary Assembly 84921 na HG03804#2#h2tg000085l unplaced-scaffold na na JBHIGR010000089.1 <> na Primary Assembly 155466 na HG03804#2#h2tg000087l unplaced-scaffold na na JBHIGR010000090.1 <> na Primary Assembly 55866 na HG03804#2#h2tg000088l unplaced-scaffold na na JBHIGR010000091.1 <> na Primary Assembly 400401 na HG03804#2#h2tg000093l unplaced-scaffold na na JBHIGR010000092.1 <> na Primary Assembly 165463 na HG03804#2#h2tg000095l unplaced-scaffold na na JBHIGR010000093.1 <> na Primary Assembly 249163 na HG03804#2#h2tg000100l unplaced-scaffold na na JBHIGR010000094.1 <> na Primary Assembly 53013 na HG03804#2#h2tg000102l unplaced-scaffold na na JBHIGR010000095.1 <> na Primary Assembly 123029 na HG03804#2#h2tg000103l unplaced-scaffold na na JBHIGR010000096.1 <> na Primary Assembly 65170 na HG03804#2#h2tg000104l unplaced-scaffold na na JBHIGR010000097.1 <> na Primary Assembly 172079 na HG03804#2#h2tg000107l unplaced-scaffold na na JBHIGR010000098.1 <> na Primary Assembly 61971 na HG03804#2#h2tg000112l unplaced-scaffold na na JBHIGR010000099.1 <> na Primary Assembly 66797 na HG03804#2#h2tg000113l unplaced-scaffold na na JBHIGR010000100.1 <> na Primary Assembly 102735 na HG03804#2#h2tg000114l unplaced-scaffold na na JBHIGR010000101.1 <> na Primary Assembly 55711 na HG03804#2#h2tg000118l unplaced-scaffold na na JBHIGR010000102.1 <> na Primary Assembly 93217 na HG03804#2#h2tg000119l unplaced-scaffold na na JBHIGR010000103.1 <> na Primary Assembly 79720 na HG03804#2#h2tg000122l unplaced-scaffold na na JBHIGR010000104.1 <> na Primary Assembly 68457 na HG03804#2#h2tg000125l unplaced-scaffold na na JBHIGR010000105.1 <> na Primary Assembly 59040 na HG03804#2#h2tg000127l unplaced-scaffold na na JBHIGR010000106.1 <> na Primary Assembly 71278 na HG03804#2#h2tg000132l unplaced-scaffold na na JBHIGR010000107.1 <> na Primary Assembly 61762 na HG03804#2#h2tg000136l unplaced-scaffold na na JBHIGR010000108.1 <> na Primary Assembly 63895 na HG03804#2#atg000007l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIGR010000109.1 <> na non-nuclear 16572 na