# Assembly name: HG04160_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04160 # Sex: male # Taxid: 9606 # BioSample: SAMN37706910 # BioProject: PRJNA1157248 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIGX01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 59x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036395.1 # Linked assembly: GCA_042036805.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042036405.1 Primary Assembly ## GCA_042036415.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04160#2#h2tg000018l assembled-molecule 1 Chromosome CM088445.1 <> na Primary Assembly 240486059 na HG04160#2#h2tg000009l assembled-molecule 3 Chromosome CM088446.1 <> na Primary Assembly 200654998 na HG04160#2#h2tg000002l assembled-molecule 4 Chromosome CM088447.1 <> na Primary Assembly 192306954 na HG04160#2#h2tg000015l assembled-molecule 5 Chromosome CM088448.1 <> na Primary Assembly 182336087 na HG04160#2#h2tg000007l assembled-molecule 7 Chromosome CM088449.1 <> na Primary Assembly 161743879 na HG04160#2#h2tg000001l assembled-molecule 8 Chromosome CM088450.1 <> na Primary Assembly 145332857 na HG04160#2#h2tg000019l assembled-molecule 10 Chromosome CM088451.1 <> na Primary Assembly 135468777 na HG04160#2#h2tg000028l assembled-molecule 11 Chromosome CM088452.1 <> na Primary Assembly 135436670 na HG04160#2#h2tg000008l assembled-molecule 12 Chromosome CM088453.1 <> na Primary Assembly 134812957 na HG04160#2#h2tg000005l assembled-molecule 13 Chromosome CM088454.1 <> na Primary Assembly 107300775 na HG04160#2#h2tg000023l assembled-molecule 19 Chromosome CM088455.1 <> na Primary Assembly 61759000 na HG04160#2#h2tg000012l assembled-molecule 20 Chromosome CM088456.1 <> na Primary Assembly 66176130 na HG04160#2#h2tg000003l unplaced-scaffold na na JBHIGX010000001.1 <> na Primary Assembly 93176385 na HG04160#2#h2tg000004l unplaced-scaffold na na JBHIGX010000002.1 <> na Primary Assembly 153182897 na HG04160#2#h2tg000010l unplaced-scaffold na na JBHIGX010000006.1 <> na Primary Assembly 61741583 na HG04160#2#h2tg000013l unplaced-scaffold na na JBHIGX010000008.1 <> na Primary Assembly 87476211 na HG04160#2#h2tg000014l unplaced-scaffold na na JBHIGX010000009.1 <> na Primary Assembly 19121699 na HG04160#2#h2tg000016l unplaced-scaffold na na JBHIGX010000011.1 <> na Primary Assembly 66933488 na HG04160#2#h2tg000017l unplaced-scaffold na na JBHIGX010000012.1 <> na Primary Assembly 87270137 na HG04160#2#h2tg000020l unplaced-scaffold na na JBHIGX010000014.1 <> na Primary Assembly 72878659 na HG04160#2#h2tg000022l unplaced-scaffold na na JBHIGX010000015.1 <> na Primary Assembly 3807613 na HG04160#2#h2tg000026l unplaced-scaffold na na JBHIGX010000016.1 <> na Primary Assembly 45001895 na HG04160#2#h2tg000030l unplaced-scaffold na na JBHIGX010000018.1 <> na Primary Assembly 43464452 na HG04160#2#h2tg000031l unplaced-scaffold na na JBHIGX010000019.1 <> na Primary Assembly 3698140 na HG04160#2#h2tg000032l unplaced-scaffold na na JBHIGX010000020.1 <> na Primary Assembly 2829974 na HG04160#2#h2tg000035l unplaced-scaffold na na JBHIGX010000021.1 <> na Primary Assembly 2692921 na HG04160#2#h2tg000036l unplaced-scaffold na na JBHIGX010000022.1 <> na Primary Assembly 991722 na HG04160#2#h2tg000037l unplaced-scaffold na na JBHIGX010000023.1 <> na Primary Assembly 111786 na HG04160#2#h2tg000039l unplaced-scaffold na na JBHIGX010000024.1 <> na Primary Assembly 1132083 na HG04160#2#h2tg000042l unplaced-scaffold na na JBHIGX010000025.1 <> na Primary Assembly 78899 na HG04160#2#h2tg000043l unplaced-scaffold na na JBHIGX010000026.1 <> na Primary Assembly 165959 na HG04160#2#h2tg000048l unplaced-scaffold na na JBHIGX010000027.1 <> na Primary Assembly 73227 na HG04160#2#h2tg000049l unplaced-scaffold na na JBHIGX010000028.1 <> na Primary Assembly 168200 na HG04160#2#h2tg000050l unplaced-scaffold na na JBHIGX010000029.1 <> na Primary Assembly 52298 na HG04160#2#h2tg000052l unplaced-scaffold na na JBHIGX010000030.1 <> na Primary Assembly 270325 na HG04160#2#h2tg000056l unplaced-scaffold na na JBHIGX010000031.1 <> na Primary Assembly 116105 na HG04160#2#h2tg000065l unplaced-scaffold na na JBHIGX010000032.1 <> na Primary Assembly 222503 na HG04160#2#h2tg000066l unplaced-scaffold na na JBHIGX010000033.1 <> na Primary Assembly 142740 na HG04160#2#h2tg000068l unplaced-scaffold na na JBHIGX010000034.1 <> na Primary Assembly 58704 na HG04160#2#h2tg000070l unplaced-scaffold na na JBHIGX010000035.1 <> na Primary Assembly 92843 na HG04160#2#h2tg000071l unplaced-scaffold na na JBHIGX010000036.1 <> na Primary Assembly 56257 na HG04160#2#h2tg000077l unplaced-scaffold na na JBHIGX010000037.1 <> na Primary Assembly 109535 na HG04160#2#h2tg000078l unplaced-scaffold na na JBHIGX010000038.1 <> na Primary Assembly 75965 na HG04160#2#h2tg000081l unplaced-scaffold na na JBHIGX010000039.1 <> na Primary Assembly 298068 na HG04160#2#h2tg000084l unplaced-scaffold na na JBHIGX010000040.1 <> na Primary Assembly 66539 na HG04160#2#h2tg000085l unplaced-scaffold na na JBHIGX010000041.1 <> na Primary Assembly 98875 na HG04160#2#h2tg000087l unplaced-scaffold na na JBHIGX010000042.1 <> na Primary Assembly 58845 na HG04160#2#h2tg000093l unplaced-scaffold na na JBHIGX010000043.1 <> na Primary Assembly 50359 na HG04160#2#h2tg000117l unplaced-scaffold na na JBHIGX010000044.1 <> na Primary Assembly 73929 na HG04160#2#h2tg000006l unplaced-scaffold na na JBHIGX010000048.1 <> na Primary Assembly 102731640 na HG04160#2#h2tg000011l unplaced-scaffold na na JBHIGX010000049.1 <> na Primary Assembly 59068056 na HG04160#2#h2tg000021l unplaced-scaffold na na JBHIGX010000051.1 <> na Primary Assembly 111061735 na HG04160#2#h2tg000024l unplaced-scaffold na na JBHIGX010000053.1 <> na Primary Assembly 49035739 na HG04160#2#h2tg000025l unplaced-scaffold na na JBHIGX010000054.1 <> na Primary Assembly 95381152 na HG04160#2#h2tg000027l unplaced-scaffold na na JBHIGX010000055.1 <> na Primary Assembly 58700619 na HG04160#2#h2tg000029l unplaced-scaffold na na JBHIGX010000056.1 <> na Primary Assembly 24650057 na HG04160#2#h2tg000033l unplaced-scaffold na na JBHIGX010000057.1 <> na Primary Assembly 2163578 na HG04160#2#h2tg000034l unplaced-scaffold na na JBHIGX010000058.1 <> na Primary Assembly 3732028 na HG04160#2#h2tg000041l unplaced-scaffold na na JBHIGX010000059.1 <> na Primary Assembly 3788964 na HG04160#2#h2tg000044l unplaced-scaffold na na JBHIGX010000060.1 <> na Primary Assembly 167499 na HG04160#2#h2tg000047l unplaced-scaffold na na JBHIGX010000061.1 <> na Primary Assembly 149602 na HG04160#2#h2tg000051l unplaced-scaffold na na JBHIGX010000062.1 <> na Primary Assembly 94601 na HG04160#2#h2tg000054l unplaced-scaffold na na JBHIGX010000063.1 <> na Primary Assembly 251757 na HG04160#2#h2tg000055l unplaced-scaffold na na JBHIGX010000064.1 <> na Primary Assembly 174041 na HG04160#2#h2tg000058l unplaced-scaffold na na JBHIGX010000065.1 <> na Primary Assembly 97556 na HG04160#2#h2tg000059l unplaced-scaffold na na JBHIGX010000066.1 <> na Primary Assembly 105640 na HG04160#2#h2tg000060l unplaced-scaffold na na JBHIGX010000067.1 <> na Primary Assembly 185595 na HG04160#2#h2tg000063l unplaced-scaffold na na JBHIGX010000068.1 <> na Primary Assembly 103396 na HG04160#2#h2tg000064l unplaced-scaffold na na JBHIGX010000069.1 <> na Primary Assembly 81045 na HG04160#2#h2tg000067l unplaced-scaffold na na JBHIGX010000070.1 <> na Primary Assembly 189801 na HG04160#2#h2tg000069l unplaced-scaffold na na JBHIGX010000071.1 <> na Primary Assembly 110204 na HG04160#2#h2tg000072l unplaced-scaffold na na JBHIGX010000072.1 <> na Primary Assembly 135072 na HG04160#2#h2tg000082l unplaced-scaffold na na JBHIGX010000073.1 <> na Primary Assembly 144993 na HG04160#2#h2tg000083l unplaced-scaffold na na JBHIGX010000074.1 <> na Primary Assembly 57018 na HG04160#2#h2tg000095l unplaced-scaffold na na JBHIGX010000075.1 <> na Primary Assembly 54022 na HG04160#2#h2tg000098l unplaced-scaffold na na JBHIGX010000076.1 <> na Primary Assembly 87052 na HG04160#2#h2tg000101l unplaced-scaffold na na JBHIGX010000077.1 <> na Primary Assembly 55913 na HG04160#2#ptg000004l_rotated unlocalized-scaffold MT Mitochondrion JBHIGX010000078.1 <> na non-nuclear 16569 na