# Assembly name: HG04160_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04160 # Sex: male # Taxid: 9606 # BioSample: SAMN37706910 # BioProject: PRJNA1157287 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIGW01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 59x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036805.1 # Linked assembly: GCA_042036395.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042037035.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04160#1#h1tg000011l assembled-molecule 1 Chromosome CM088423.1 <> na Primary Assembly 247348997 na HG04160#1#h1tg000017l assembled-molecule 3 Chromosome CM088424.1 <> na Primary Assembly 201563586 na HG04160#1#h1tg000002l assembled-molecule 4 Chromosome CM088425.1 <> na Primary Assembly 192888894 na HG04160#1#h1tg000016l assembled-molecule 5 Chromosome CM088426.1 <> na Primary Assembly 182265428 na HG04160#1#h1tg000013l assembled-molecule 7 Chromosome CM088427.1 <> na Primary Assembly 161465095 na HG04160#1#h1tg000008l assembled-molecule 8 Chromosome CM088428.1 <> na Primary Assembly 147386732 na HG04160#1#h1tg000014l assembled-molecule 9 Chromosome CM088429.1 <> na Primary Assembly 150720748 na HG04160#1#h1tg000003l assembled-molecule 10 Chromosome CM088430.1 <> na Primary Assembly 135604956 na HG04160#1#h1tg000024l assembled-molecule 11 Chromosome CM088431.1 <> na Primary Assembly 134878121 na HG04160#1#h1tg000006l assembled-molecule 12 Chromosome CM088432.1 <> na Primary Assembly 134536226 na HG04160#1#h1tg000005l assembled-molecule 19 Chromosome CM088433.1 <> na Primary Assembly 61803294 na HG04160#1#h1tg000026l assembled-molecule 20 Chromosome CM088434.1 <> na Primary Assembly 67282777 na HG04160#1#h1tg000004l assembled-molecule 21 Chromosome CM088435.1 <> na Primary Assembly 43155025 na HG04160#1#h1tg000001l unplaced-scaffold na na JBHIGW010000001.1 <> na Primary Assembly 111060797 na HG04160#1#h1tg000010l unplaced-scaffold na na JBHIGW010000006.1 <> na Primary Assembly 152281515 na HG04160#1#h1tg000012l unplaced-scaffold na na JBHIGW010000007.1 <> na Primary Assembly 55109343 na HG04160#1#h1tg000021l unplaced-scaffold na na JBHIGW010000011.1 <> na Primary Assembly 625561 na HG04160#1#h1tg000023l unplaced-scaffold na na JBHIGW010000012.1 <> na Primary Assembly 59556530 na HG04160#1#h1tg000025l unplaced-scaffold na na JBHIGW010000014.1 <> na Primary Assembly 45208858 na HG04160#1#h1tg000028l unplaced-scaffold na na JBHIGW010000015.1 <> na Primary Assembly 225542 na HG04160#1#h1tg000030l unplaced-scaffold na na JBHIGW010000016.1 <> na Primary Assembly 60551299 na HG04160#1#h1tg000031l unplaced-scaffold na na JBHIGW010000017.1 <> na Primary Assembly 1313640 na HG04160#1#h1tg000034l unplaced-scaffold na na JBHIGW010000018.1 <> na Primary Assembly 3899334 na HG04160#1#h1tg000037l unplaced-scaffold na na JBHIGW010000019.1 <> na Primary Assembly 51094 na HG04160#1#h1tg000039l unplaced-scaffold na na JBHIGW010000020.1 <> na Primary Assembly 5037051 na HG04160#1#h1tg000046l unplaced-scaffold na na JBHIGW010000021.1 <> na Primary Assembly 128826 na HG04160#1#h1tg000047l unplaced-scaffold na na JBHIGW010000022.1 <> na Primary Assembly 478531 na HG04160#1#h1tg000049l unplaced-scaffold na na JBHIGW010000023.1 <> na Primary Assembly 170228 na HG04160#1#h1tg000051l unplaced-scaffold na na JBHIGW010000024.1 <> na Primary Assembly 140793 na HG04160#1#h1tg000052l unplaced-scaffold na na JBHIGW010000025.1 <> na Primary Assembly 204264 na HG04160#1#h1tg000054l unplaced-scaffold na na JBHIGW010000026.1 <> na Primary Assembly 1431543 na HG04160#1#h1tg000056l unplaced-scaffold na na JBHIGW010000027.1 <> na Primary Assembly 1074858 na HG04160#1#h1tg000057l unplaced-scaffold na na JBHIGW010000028.1 <> na Primary Assembly 68463 na HG04160#1#h1tg000059l unplaced-scaffold na na JBHIGW010000029.1 <> na Primary Assembly 472238 na HG04160#1#h1tg000062l unplaced-scaffold na na JBHIGW010000030.1 <> na Primary Assembly 71025 na HG04160#1#h1tg000064l unplaced-scaffold na na JBHIGW010000031.1 <> na Primary Assembly 267308 na HG04160#1#h1tg000065l unplaced-scaffold na na JBHIGW010000032.1 <> na Primary Assembly 205924 na HG04160#1#h1tg000067l unplaced-scaffold na na JBHIGW010000033.1 <> na Primary Assembly 120676 na HG04160#1#h1tg000069l unplaced-scaffold na na JBHIGW010000034.1 <> na Primary Assembly 326302 na HG04160#1#h1tg000074l unplaced-scaffold na na JBHIGW010000035.1 <> na Primary Assembly 508434 na HG04160#1#h1tg000077l unplaced-scaffold na na JBHIGW010000036.1 <> na Primary Assembly 105856 na HG04160#1#h1tg000081l unplaced-scaffold na na JBHIGW010000037.1 <> na Primary Assembly 53348 na HG04160#1#h1tg000087l unplaced-scaffold na na JBHIGW010000038.1 <> na Primary Assembly 78066 na HG04160#1#h1tg000088l unplaced-scaffold na na JBHIGW010000039.1 <> na Primary Assembly 101335 na HG04160#1#h1tg000092l unplaced-scaffold na na JBHIGW010000040.1 <> na Primary Assembly 158122 na HG04160#1#h1tg000094l unplaced-scaffold na na JBHIGW010000041.1 <> na Primary Assembly 122127 na HG04160#1#h1tg000095l unplaced-scaffold na na JBHIGW010000042.1 <> na Primary Assembly 88129 na HG04160#1#h1tg000098l unplaced-scaffold na na JBHIGW010000043.1 <> na Primary Assembly 58716 na HG04160#1#h1tg000099l unplaced-scaffold na na JBHIGW010000044.1 <> na Primary Assembly 113231 na HG04160#1#h1tg000101l unplaced-scaffold na na JBHIGW010000045.1 <> na Primary Assembly 71470 na HG04160#1#h1tg000109l unplaced-scaffold na na JBHIGW010000046.1 <> na Primary Assembly 132502 na HG04160#1#h1tg000110l unplaced-scaffold na na JBHIGW010000047.1 <> na Primary Assembly 83533 na HG04160#1#h1tg000112l unplaced-scaffold na na JBHIGW010000048.1 <> na Primary Assembly 122553 na HG04160#1#h1tg000121l unplaced-scaffold na na JBHIGW010000049.1 <> na Primary Assembly 50119 na HG04160#1#h1tg000123l unplaced-scaffold na na JBHIGW010000050.1 <> na Primary Assembly 69153 na HG04160#1#h1tg000130l unplaced-scaffold na na JBHIGW010000051.1 <> na Primary Assembly 50139 na HG04160#1#h1tg000144l unplaced-scaffold na na JBHIGW010000052.1 <> na Primary Assembly 56461 na HG04160#1#h1tg000146l unplaced-scaffold na na JBHIGW010000053.1 <> na Primary Assembly 58678 na HG04160#1#h1tg000007l unplaced-scaffold na na JBHIGW010000056.1 <> na Primary Assembly 97206947 na HG04160#1#h1tg000009l unplaced-scaffold na na JBHIGW010000057.1 <> na Primary Assembly 19537628 na HG04160#1#h1tg000015l unplaced-scaffold na na JBHIGW010000060.1 <> na Primary Assembly 88731464 na HG04160#1#h1tg000018l unplaced-scaffold na na JBHIGW010000061.1 <> na Primary Assembly 81089607 na HG04160#1#h1tg000019l unplaced-scaffold na na JBHIGW010000062.1 <> na Primary Assembly 97161192 na HG04160#1#h1tg000020l unplaced-scaffold na na JBHIGW010000063.1 <> na Primary Assembly 87281567 na HG04160#1#h1tg000022l unplaced-scaffold na na JBHIGW010000064.1 <> na Primary Assembly 10115386 na HG04160#1#h1tg000027l unplaced-scaffold na na JBHIGW010000066.1 <> na Primary Assembly 24438586 na HG04160#1#h1tg000029l unplaced-scaffold na na JBHIGW010000067.1 <> na Primary Assembly 58991917 na HG04160#1#h1tg000032l unplaced-scaffold na na JBHIGW010000068.1 <> na Primary Assembly 3062541 na HG04160#1#h1tg000033l unplaced-scaffold na na JBHIGW010000069.1 <> na Primary Assembly 7932850 na HG04160#1#h1tg000035l unplaced-scaffold na na JBHIGW010000070.1 <> na Primary Assembly 1665694 na HG04160#1#h1tg000036l unplaced-scaffold na na JBHIGW010000071.1 <> na Primary Assembly 1825590 na HG04160#1#h1tg000038l unplaced-scaffold na na JBHIGW010000072.1 <> na Primary Assembly 290313 na HG04160#1#h1tg000040l unplaced-scaffold na na JBHIGW010000073.1 <> na Primary Assembly 433793 na HG04160#1#h1tg000041l unplaced-scaffold na na JBHIGW010000074.1 <> na Primary Assembly 2700378 na HG04160#1#h1tg000042l unplaced-scaffold na na JBHIGW010000075.1 <> na Primary Assembly 279169 na HG04160#1#h1tg000043l unplaced-scaffold na na JBHIGW010000076.1 <> na Primary Assembly 116490 na HG04160#1#h1tg000045l unplaced-scaffold na na JBHIGW010000077.1 <> na Primary Assembly 2584105 na HG04160#1#h1tg000048l unplaced-scaffold na na JBHIGW010000078.1 <> na Primary Assembly 212943 na HG04160#1#h1tg000050l unplaced-scaffold na na JBHIGW010000079.1 <> na Primary Assembly 130978 na HG04160#1#h1tg000053l unplaced-scaffold na na JBHIGW010000080.1 <> na Primary Assembly 82033 na HG04160#1#h1tg000055l unplaced-scaffold na na JBHIGW010000081.1 <> na Primary Assembly 64990 na HG04160#1#h1tg000060l unplaced-scaffold na na JBHIGW010000082.1 <> na Primary Assembly 227762 na HG04160#1#h1tg000061l unplaced-scaffold na na JBHIGW010000083.1 <> na Primary Assembly 102880 na HG04160#1#h1tg000066l unplaced-scaffold na na JBHIGW010000084.1 <> na Primary Assembly 261753 na HG04160#1#h1tg000068l unplaced-scaffold na na JBHIGW010000085.1 <> na Primary Assembly 67962 na HG04160#1#h1tg000072l unplaced-scaffold na na JBHIGW010000086.1 <> na Primary Assembly 51872 na HG04160#1#h1tg000075l unplaced-scaffold na na JBHIGW010000087.1 <> na Primary Assembly 201343 na HG04160#1#h1tg000078l unplaced-scaffold na na JBHIGW010000088.1 <> na Primary Assembly 62795 na HG04160#1#h1tg000079l unplaced-scaffold na na JBHIGW010000089.1 <> na Primary Assembly 56569 na HG04160#1#h1tg000083l unplaced-scaffold na na JBHIGW010000090.1 <> na Primary Assembly 90785 na HG04160#1#h1tg000084l unplaced-scaffold na na JBHIGW010000091.1 <> na Primary Assembly 78641 na HG04160#1#h1tg000085l unplaced-scaffold na na JBHIGW010000092.1 <> na Primary Assembly 149527 na HG04160#1#h1tg000086l unplaced-scaffold na na JBHIGW010000093.1 <> na Primary Assembly 91961 na HG04160#1#h1tg000089l unplaced-scaffold na na JBHIGW010000094.1 <> na Primary Assembly 182739 na HG04160#1#h1tg000090l unplaced-scaffold na na JBHIGW010000095.1 <> na Primary Assembly 60788 na HG04160#1#h1tg000093l unplaced-scaffold na na JBHIGW010000096.1 <> na Primary Assembly 95664 na HG04160#1#h1tg000097l unplaced-scaffold na na JBHIGW010000097.1 <> na Primary Assembly 86269 na HG04160#1#h1tg000100l unplaced-scaffold na na JBHIGW010000098.1 <> na Primary Assembly 123704 na HG04160#1#h1tg000102l unplaced-scaffold na na JBHIGW010000099.1 <> na Primary Assembly 58758 na HG04160#1#h1tg000105l unplaced-scaffold na na JBHIGW010000100.1 <> na Primary Assembly 53844 na HG04160#1#h1tg000113l unplaced-scaffold na na JBHIGW010000101.1 <> na Primary Assembly 90858 na HG04160#1#h1tg000115l unplaced-scaffold na na JBHIGW010000102.1 <> na Primary Assembly 154485 na HG04160#1#h1tg000128l unplaced-scaffold na na JBHIGW010000103.1 <> na Primary Assembly 91201 na HG04160#1#h1tg000129l unplaced-scaffold na na JBHIGW010000104.1 <> na Primary Assembly 50142 na HG04160#1#h1tg000133l unplaced-scaffold na na JBHIGW010000105.1 <> na Primary Assembly 70970 na HG04160#1#h1tg000135l unplaced-scaffold na na JBHIGW010000106.1 <> na Primary Assembly 85550 na HG04160#1#h1tg000143l unplaced-scaffold na na JBHIGW010000107.1 <> na Primary Assembly 68668 na HG04160#1#h1tg000145l unplaced-scaffold na na JBHIGW010000108.1 <> na Primary Assembly 55726 na