# Assembly name: HG00639_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00639 # Sex: female # Taxid: 9606 # BioSample: SAMN33758781 # BioProject: PRJNA1157252 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIHF01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 64x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042037155.1 # Linked assembly: GCA_042037765.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042037315.1 Primary Assembly ## GCA_042037345.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00639#2#h2tg000008l assembled-molecule 1 Chromosome CM088551.1 <> na Primary Assembly 254770970 na HG00639#2#h2tg000001l assembled-molecule 3 Chromosome CM088552.1 <> na Primary Assembly 202821403 na HG00639#2#h2tg000004l assembled-molecule 4 Chromosome CM088553.1 <> na Primary Assembly 190505979 na HG00639#2#h2tg000023l assembled-molecule 5 Chromosome CM088554.1 <> na Primary Assembly 184343747 na HG00639#2#h2tg000020l assembled-molecule 6 Chromosome CM088555.1 <> na Primary Assembly 171560883 na HG00639#2#h2tg000021l assembled-molecule 7 Chromosome CM088556.1 <> na Primary Assembly 160112428 na HG00639#2#h2tg000007l assembled-molecule 8 Chromosome CM088557.1 <> na Primary Assembly 145941412 na HG00639#2#h2tg000010l assembled-molecule 10 Chromosome CM088558.1 <> na Primary Assembly 134520068 na HG00639#2#h2tg000017l assembled-molecule 11 Chromosome CM088559.1 <> na Primary Assembly 134204888 na HG00639#2#h2tg000022l assembled-molecule 12 Chromosome CM088560.1 <> na Primary Assembly 133479696 na HG00639#2#h2tg000018l assembled-molecule 16 Chromosome CM088561.1 <> na Primary Assembly 90384665 na HG00639#2#h2tg000003l assembled-molecule 18 Chromosome CM088562.1 <> na Primary Assembly 78141283 na HG00639#2#h2tg000006l assembled-molecule 20 Chromosome CM088563.1 <> na Primary Assembly 67467710 na HG00639#2#h2tg000005l unplaced-scaffold na na JBHIHF010000002.1 <> na Primary Assembly 97262407 na HG00639#2#h2tg000009l unplaced-scaffold na na JBHIHF010000003.1 <> na Primary Assembly 153634261 na HG00639#2#h2tg000012l unplaced-scaffold na na JBHIHF010000005.1 <> na Primary Assembly 97856283 na HG00639#2#h2tg000013l unplaced-scaffold na na JBHIHF010000006.1 <> na Primary Assembly 98033365 na HG00639#2#h2tg000014l unplaced-scaffold na na JBHIHF010000007.1 <> na Primary Assembly 88863322 na HG00639#2#h2tg000015l unplaced-scaffold na na JBHIHF010000008.1 <> na Primary Assembly 95086986 na HG00639#2#h2tg000026l unplaced-scaffold na na JBHIHF010000012.1 <> na Primary Assembly 45616208 na HG00639#2#h2tg000028l unplaced-scaffold na na JBHIHF010000013.1 <> na Primary Assembly 39669796 na HG00639#2#h2tg000030l unplaced-scaffold na na JBHIHF010000014.1 <> na Primary Assembly 6255279 na HG00639#2#h2tg000031l unplaced-scaffold na na JBHIHF010000015.1 <> na Primary Assembly 6632150 na HG00639#2#h2tg000032l unplaced-scaffold na na JBHIHF010000016.1 <> na Primary Assembly 639200 na HG00639#2#h2tg000033l unplaced-scaffold na na JBHIHF010000017.1 <> na Primary Assembly 393367 na HG00639#2#h2tg000040l unplaced-scaffold na na JBHIHF010000018.1 <> na Primary Assembly 1275524 na HG00639#2#h2tg000045l unplaced-scaffold na na JBHIHF010000019.1 <> na Primary Assembly 495017 na HG00639#2#h2tg000046l unplaced-scaffold na na JBHIHF010000020.1 <> na Primary Assembly 178165 na HG00639#2#h2tg000048l unplaced-scaffold na na JBHIHF010000021.1 <> na Primary Assembly 245787 na HG00639#2#h2tg000049l unplaced-scaffold na na JBHIHF010000022.1 <> na Primary Assembly 118085 na HG00639#2#h2tg000050l unplaced-scaffold na na JBHIHF010000023.1 <> na Primary Assembly 177677 na HG00639#2#h2tg000051l unplaced-scaffold na na JBHIHF010000024.1 <> na Primary Assembly 172388 na HG00639#2#h2tg000052l unplaced-scaffold na na JBHIHF010000025.1 <> na Primary Assembly 209048 na HG00639#2#h2tg000053l unplaced-scaffold na na JBHIHF010000026.1 <> na Primary Assembly 482536 na HG00639#2#h2tg000054l unplaced-scaffold na na JBHIHF010000027.1 <> na Primary Assembly 519739 na HG00639#2#h2tg000055l unplaced-scaffold na na JBHIHF010000028.1 <> na Primary Assembly 174830 na HG00639#2#h2tg000058l unplaced-scaffold na na JBHIHF010000029.1 <> na Primary Assembly 151323 na HG00639#2#h2tg000059l unplaced-scaffold na na JBHIHF010000030.1 <> na Primary Assembly 116015 na HG00639#2#h2tg000060l unplaced-scaffold na na JBHIHF010000031.1 <> na Primary Assembly 60415 na HG00639#2#h2tg000065l unplaced-scaffold na na JBHIHF010000032.1 <> na Primary Assembly 173553 na HG00639#2#h2tg000068l unplaced-scaffold na na JBHIHF010000033.1 <> na Primary Assembly 83904 na HG00639#2#h2tg000069l unplaced-scaffold na na JBHIHF010000034.1 <> na Primary Assembly 118742 na HG00639#2#h2tg000072l unplaced-scaffold na na JBHIHF010000035.1 <> na Primary Assembly 73824 na HG00639#2#h2tg000073l unplaced-scaffold na na JBHIHF010000036.1 <> na Primary Assembly 57611 na HG00639#2#h2tg000075l unplaced-scaffold na na JBHIHF010000037.1 <> na Primary Assembly 86555 na HG00639#2#h2tg000076l unplaced-scaffold na na JBHIHF010000038.1 <> na Primary Assembly 142344 na HG00639#2#h2tg000090l unplaced-scaffold na na JBHIHF010000039.1 <> na Primary Assembly 57864 na HG00639#2#h2tg000091l unplaced-scaffold na na JBHIHF010000040.1 <> na Primary Assembly 52778 na HG00639#2#h2tg000002l unplaced-scaffold na na JBHIHF010000042.1 <> na Primary Assembly 154791889 na HG00639#2#h2tg000011l unplaced-scaffold na na JBHIHF010000047.1 <> na Primary Assembly 37443022 na HG00639#2#h2tg000016l unplaced-scaffold na na JBHIHF010000048.1 <> na Primary Assembly 31444847 na HG00639#2#h2tg000019l unplaced-scaffold na na JBHIHF010000050.1 <> na Primary Assembly 24398323 na HG00639#2#h2tg000024l unplaced-scaffold na na JBHIHF010000053.1 <> na Primary Assembly 58231915 na HG00639#2#h2tg000025l unplaced-scaffold na na JBHIHF010000054.1 <> na Primary Assembly 29592007 na HG00639#2#h2tg000027l unplaced-scaffold na na JBHIHF010000055.1 <> na Primary Assembly 4094868 na HG00639#2#h2tg000029l unplaced-scaffold na na JBHIHF010000056.1 <> na Primary Assembly 94184 na HG00639#2#h2tg000034l unplaced-scaffold na na JBHIHF010000057.1 <> na Primary Assembly 126719 na HG00639#2#h2tg000036l unplaced-scaffold na na JBHIHF010000058.1 <> na Primary Assembly 3800272 na HG00639#2#h2tg000037l unplaced-scaffold na na JBHIHF010000059.1 <> na Primary Assembly 285872 na HG00639#2#h2tg000038l unplaced-scaffold na na JBHIHF010000060.1 <> na Primary Assembly 3595640 na HG00639#2#h2tg000039l unplaced-scaffold na na JBHIHF010000061.1 <> na Primary Assembly 124373 na HG00639#2#h2tg000041l unplaced-scaffold na na JBHIHF010000062.1 <> na Primary Assembly 2451270 na HG00639#2#h2tg000047l unplaced-scaffold na na JBHIHF010000063.1 <> na Primary Assembly 99131 na HG00639#2#h2tg000057l unplaced-scaffold na na JBHIHF010000064.1 <> na Primary Assembly 362524 na HG00639#2#h2tg000061l unplaced-scaffold na na JBHIHF010000065.1 <> na Primary Assembly 92269 na HG00639#2#h2tg000062l unplaced-scaffold na na JBHIHF010000066.1 <> na Primary Assembly 70819 na HG00639#2#h2tg000063l unplaced-scaffold na na JBHIHF010000067.1 <> na Primary Assembly 74899 na HG00639#2#h2tg000066l unplaced-scaffold na na JBHIHF010000068.1 <> na Primary Assembly 182201 na HG00639#2#h2tg000067l unplaced-scaffold na na JBHIHF010000069.1 <> na Primary Assembly 130028 na HG00639#2#h2tg000071l unplaced-scaffold na na JBHIHF010000070.1 <> na Primary Assembly 99045 na HG00639#2#h2tg000077l unplaced-scaffold na na JBHIHF010000071.1 <> na Primary Assembly 78172 na HG00639#2#h2tg000078l unplaced-scaffold na na JBHIHF010000072.1 <> na Primary Assembly 86277 na HG00639#2#h2tg000079l unplaced-scaffold na na JBHIHF010000073.1 <> na Primary Assembly 109962 na HG00639#2#h2tg000081l unplaced-scaffold na na JBHIHF010000074.1 <> na Primary Assembly 62663 na HG00639#2#h2tg000083l unplaced-scaffold na na JBHIHF010000075.1 <> na Primary Assembly 63679 na HG00639#2#h2tg000084l unplaced-scaffold na na JBHIHF010000076.1 <> na Primary Assembly 58112 na HG00639#2#h2tg000088l unplaced-scaffold na na JBHIHF010000077.1 <> na Primary Assembly 52395 na HG00639#2#h2tg000089l unplaced-scaffold na na JBHIHF010000078.1 <> na Primary Assembly 65734 na HG00639#2#h2tg000093l unplaced-scaffold na na JBHIHF010000079.1 <> na Primary Assembly 62704 na HG00639#2#atg000010l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIHF010000080.1 <> na non-nuclear 16568 na