# Assembly name: HG01940_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01940 # Sex: female # Taxid: 9606 # BioSample: SAMN37797101 # BioProject: PRJNA1157255 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIHL01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 63x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042037435.1 # Linked assembly: GCA_042037875.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042037635.1 Primary Assembly ## GCA_042037665.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01940#2#h2tg000007l assembled-molecule 1 Chromosome CM088658.1 <> na Primary Assembly 248123530 na HG01940#2#h2tg000013l assembled-molecule 2 Chromosome CM088659.1 <> na Primary Assembly 241441654 na HG01940#2#h2tg000006l assembled-molecule 3 Chromosome CM088660.1 <> na Primary Assembly 201979113 na HG01940#2#h2tg000016l assembled-molecule 4 Chromosome CM088661.1 <> na Primary Assembly 192319497 na HG01940#2#h2tg000014l assembled-molecule 5 Chromosome CM088662.1 <> na Primary Assembly 182206233 na HG01940#2#h2tg000015l assembled-molecule 8 Chromosome CM088663.1 <> na Primary Assembly 146524297 na HG01940#2#h2tg000005l assembled-molecule 9 Chromosome CM088664.1 <> na Primary Assembly 133401023 na HG01940#2#h2tg000012l assembled-molecule 10 Chromosome CM088665.1 <> na Primary Assembly 135198021 na HG01940#2#h2tg000008l assembled-molecule 11 Chromosome CM088666.1 <> na Primary Assembly 136902309 na HG01940#2#h2tg000003l assembled-molecule 12 Chromosome CM088667.1 <> na Primary Assembly 134142308 na HG01940#2#h2tg000010l assembled-molecule 16 Chromosome CM088668.1 <> na Primary Assembly 89574400 na HG01940#2#h2tg000004l assembled-molecule 17 Chromosome CM088669.1 <> na Primary Assembly 83213163 na HG01940#2#h2tg000001l assembled-molecule 19 Chromosome CM088670.1 <> na Primary Assembly 63418873 na HG01940#2#h2tg000018l assembled-molecule 20 Chromosome CM088671.1 <> na Primary Assembly 66207852 na HG01940#2#h2tg000011l assembled-molecule X Chromosome CM088672.1 <> na Primary Assembly 154552926 na HG01940#2#h2tg000009l unplaced-scaffold na na JBHIHL010000004.1 <> na Primary Assembly 100830790 na HG01940#2#h2tg000019l unplaced-scaffold na na JBHIHL010000009.1 <> na Primary Assembly 170921953 na HG01940#2#h2tg000020l unplaced-scaffold na na JBHIHL010000010.1 <> na Primary Assembly 61812178 na HG01940#2#h2tg000022l unplaced-scaffold na na JBHIHL010000011.1 <> na Primary Assembly 13406410 na HG01940#2#h2tg000023l unplaced-scaffold na na JBHIHL010000012.1 <> na Primary Assembly 47755614 na HG01940#2#h2tg000024l unplaced-scaffold na na JBHIHL010000013.1 <> na Primary Assembly 88923447 na HG01940#2#h2tg000027l unplaced-scaffold na na JBHIHL010000014.1 <> na Primary Assembly 517391 na HG01940#2#h2tg000030l unplaced-scaffold na na JBHIHL010000015.1 <> na Primary Assembly 19050506 na HG01940#2#h2tg000031l unplaced-scaffold na na JBHIHL010000016.1 <> na Primary Assembly 232473 na HG01940#2#h2tg000037l unplaced-scaffold na na JBHIHL010000017.1 <> na Primary Assembly 525037 na HG01940#2#h2tg000038l unplaced-scaffold na na JBHIHL010000018.1 <> na Primary Assembly 77351 na HG01940#2#h2tg000039l unplaced-scaffold na na JBHIHL010000019.1 <> na Primary Assembly 105785 na HG01940#2#h2tg000041l unplaced-scaffold na na JBHIHL010000020.1 <> na Primary Assembly 99182 na HG01940#2#h2tg000042l unplaced-scaffold na na JBHIHL010000021.1 <> na Primary Assembly 131409 na HG01940#2#h2tg000044l unplaced-scaffold na na JBHIHL010000022.1 <> na Primary Assembly 62253 na HG01940#2#h2tg000045l unplaced-scaffold na na JBHIHL010000023.1 <> na Primary Assembly 87022 na HG01940#2#h2tg000047l unplaced-scaffold na na JBHIHL010000024.1 <> na Primary Assembly 116565 na HG01940#2#h2tg000051l unplaced-scaffold na na JBHIHL010000025.1 <> na Primary Assembly 100902 na HG01940#2#h2tg000055l unplaced-scaffold na na JBHIHL010000026.1 <> na Primary Assembly 94992 na HG01940#2#h2tg000058l unplaced-scaffold na na JBHIHL010000027.1 <> na Primary Assembly 70329 na HG01940#2#h2tg000064l unplaced-scaffold na na JBHIHL010000028.1 <> na Primary Assembly 72664 na HG01940#2#h2tg000002l unplaced-scaffold na na JBHIHL010000029.1 <> na Primary Assembly 98309819 na HG01940#2#h2tg000017l unplaced-scaffold na na JBHIHL010000038.1 <> na Primary Assembly 103492080 na HG01940#2#h2tg000021l unplaced-scaffold na na JBHIHL010000039.1 <> na Primary Assembly 60827425 na HG01940#2#h2tg000025l unplaced-scaffold na na JBHIHL010000040.1 <> na Primary Assembly 4272311 na HG01940#2#h2tg000026l unplaced-scaffold na na JBHIHL010000041.1 <> na Primary Assembly 54044 na HG01940#2#h2tg000028l unplaced-scaffold na na JBHIHL010000042.1 <> na Primary Assembly 38788886 na HG01940#2#h2tg000029l unplaced-scaffold na na JBHIHL010000043.1 <> na Primary Assembly 2472559 na HG01940#2#h2tg000032l unplaced-scaffold na na JBHIHL010000044.1 <> na Primary Assembly 4471840 na HG01940#2#h2tg000034l unplaced-scaffold na na JBHIHL010000045.1 <> na Primary Assembly 1456841 na HG01940#2#h2tg000035l unplaced-scaffold na na JBHIHL010000046.1 <> na Primary Assembly 1819854 na HG01940#2#h2tg000036l unplaced-scaffold na na JBHIHL010000047.1 <> na Primary Assembly 147563 na HG01940#2#h2tg000040l unplaced-scaffold na na JBHIHL010000048.1 <> na Primary Assembly 174038 na HG01940#2#h2tg000043l unplaced-scaffold na na JBHIHL010000049.1 <> na Primary Assembly 63378 na HG01940#2#h2tg000046l unplaced-scaffold na na JBHIHL010000050.1 <> na Primary Assembly 223872 na HG01940#2#h2tg000052l unplaced-scaffold na na JBHIHL010000051.1 <> na Primary Assembly 77628 na HG01940#2#h2tg000053l unplaced-scaffold na na JBHIHL010000052.1 <> na Primary Assembly 71276 na HG01940#2#h2tg000056l unplaced-scaffold na na JBHIHL010000053.1 <> na Primary Assembly 147007 na HG01940#2#h2tg000060l unplaced-scaffold na na JBHIHL010000054.1 <> na Primary Assembly 67500 na HG01940#2#h2tg000061l unplaced-scaffold na na JBHIHL010000055.1 <> na Primary Assembly 59689 na HG01940#2#ptg000004l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIHL010000056.1 <> na non-nuclear 16569 na