# Assembly name: HG03239_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03239 # Sex: female # Taxid: 9606 # BioSample: SAMN33758794 # BioProject: PRJNA1157259 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIHT01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 61x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042037705.1 # Linked assembly: GCA_042037925.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042037745.1 Primary Assembly ## GCA_042037755.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03239#2#h2tg000015l assembled-molecule 2 Chromosome CM088758.1 <> na Primary Assembly 242174507 na HG03239#2#h2tg000014l assembled-molecule 3 Chromosome CM088759.1 <> na Primary Assembly 201586103 na HG03239#2#h2tg000018l assembled-molecule 5 Chromosome CM088760.1 <> na Primary Assembly 182379000 na HG03239#2#h2tg000005l assembled-molecule 6 Chromosome CM088761.1 <> na Primary Assembly 172844238 na HG03239#2#h2tg000003l assembled-molecule 7 Chromosome CM088762.1 <> na Primary Assembly 160189753 na HG03239#2#h2tg000012l assembled-molecule 8 Chromosome CM088763.1 <> na Primary Assembly 144895299 na HG03239#2#h2tg000022l assembled-molecule 9 Chromosome CM088764.1 <> na Primary Assembly 137030409 na HG03239#2#h2tg000011l assembled-molecule 10 Chromosome CM088765.1 <> na Primary Assembly 135150608 na HG03239#2#h2tg000024l assembled-molecule 11 Chromosome CM088766.1 <> na Primary Assembly 137721364 na HG03239#2#h2tg000001l assembled-molecule 12 Chromosome CM088767.1 <> na Primary Assembly 134554917 na HG03239#2#h2tg000017l assembled-molecule 16 Chromosome CM088768.1 <> na Primary Assembly 90051521 na HG03239#2#h2tg000019l assembled-molecule 17 Chromosome CM088769.1 <> na Primary Assembly 83384308 na HG03239#2#h2tg000026l assembled-molecule 19 Chromosome CM088770.1 <> na Primary Assembly 61396533 na HG03239#2#h2tg000004l assembled-molecule 20 Chromosome CM088771.1 <> na Primary Assembly 66281100 na HG03239#2#h2tg000021l assembled-molecule 21 Chromosome CM088772.1 <> na Primary Assembly 43358695 na HG03239#2#h2tg000002l unplaced-scaffold na na JBHIHT010000002.1 <> na Primary Assembly 136717121 na HG03239#2#h2tg000007l unplaced-scaffold na na JBHIHT010000004.1 <> na Primary Assembly 94168715 na HG03239#2#h2tg000009l unplaced-scaffold na na JBHIHT010000005.1 <> na Primary Assembly 44196584 na HG03239#2#h2tg000010l unplaced-scaffold na na JBHIHT010000006.1 <> na Primary Assembly 105248874 na HG03239#2#h2tg000013l unplaced-scaffold na na JBHIHT010000007.1 <> na Primary Assembly 103060757 na HG03239#2#h2tg000016l unplaced-scaffold na na JBHIHT010000009.1 <> na Primary Assembly 190911381 na HG03239#2#h2tg000025l unplaced-scaffold na na JBHIHT010000013.1 <> na Primary Assembly 18905311 na HG03239#2#h2tg000030l unplaced-scaffold na na JBHIHT010000014.1 <> na Primary Assembly 82197 na HG03239#2#h2tg000033l unplaced-scaffold na na JBHIHT010000015.1 <> na Primary Assembly 1913589 na HG03239#2#h2tg000035l unplaced-scaffold na na JBHIHT010000016.1 <> na Primary Assembly 146813 na HG03239#2#h2tg000036l unplaced-scaffold na na JBHIHT010000017.1 <> na Primary Assembly 102419 na HG03239#2#h2tg000037l unplaced-scaffold na na JBHIHT010000018.1 <> na Primary Assembly 82349 na HG03239#2#h2tg000039l unplaced-scaffold na na JBHIHT010000019.1 <> na Primary Assembly 472074 na HG03239#2#h2tg000041l unplaced-scaffold na na JBHIHT010000020.1 <> na Primary Assembly 551086 na HG03239#2#h2tg000043l unplaced-scaffold na na JBHIHT010000021.1 <> na Primary Assembly 312143 na HG03239#2#h2tg000046l unplaced-scaffold na na JBHIHT010000022.1 <> na Primary Assembly 122578 na HG03239#2#h2tg000047l unplaced-scaffold na na JBHIHT010000023.1 <> na Primary Assembly 369259 na HG03239#2#h2tg000049l unplaced-scaffold na na JBHIHT010000024.1 <> na Primary Assembly 570888 na HG03239#2#h2tg000051l unplaced-scaffold na na JBHIHT010000025.1 <> na Primary Assembly 59384 na HG03239#2#h2tg000053l unplaced-scaffold na na JBHIHT010000026.1 <> na Primary Assembly 296660 na HG03239#2#h2tg000054l unplaced-scaffold na na JBHIHT010000027.1 <> na Primary Assembly 318194 na HG03239#2#h2tg000055l unplaced-scaffold na na JBHIHT010000028.1 <> na Primary Assembly 137488 na HG03239#2#h2tg000057l unplaced-scaffold na na JBHIHT010000029.1 <> na Primary Assembly 69856 na HG03239#2#h2tg000061l unplaced-scaffold na na JBHIHT010000030.1 <> na Primary Assembly 111035 na HG03239#2#h2tg000062l unplaced-scaffold na na JBHIHT010000031.1 <> na Primary Assembly 93769 na HG03239#2#h2tg000066l unplaced-scaffold na na JBHIHT010000032.1 <> na Primary Assembly 60734 na HG03239#2#h2tg000069l unplaced-scaffold na na JBHIHT010000033.1 <> na Primary Assembly 90538 na HG03239#2#h2tg000070l unplaced-scaffold na na JBHIHT010000034.1 <> na Primary Assembly 90159 na HG03239#2#h2tg000072l unplaced-scaffold na na JBHIHT010000035.1 <> na Primary Assembly 113046 na HG03239#2#h2tg000073l unplaced-scaffold na na JBHIHT010000036.1 <> na Primary Assembly 53368 na HG03239#2#h2tg000074l unplaced-scaffold na na JBHIHT010000037.1 <> na Primary Assembly 147657 na HG03239#2#h2tg000006l unplaced-scaffold na na JBHIHT010000040.1 <> na Primary Assembly 94208523 na HG03239#2#h2tg000008l unplaced-scaffold na na JBHIHT010000041.1 <> na Primary Assembly 134738181 na HG03239#2#h2tg000020l unplaced-scaffold na na JBHIHT010000046.1 <> na Primary Assembly 19739117 na HG03239#2#h2tg000023l unplaced-scaffold na na JBHIHT010000048.1 <> na Primary Assembly 60713151 na HG03239#2#h2tg000027l unplaced-scaffold na na JBHIHT010000051.1 <> na Primary Assembly 3524021 na HG03239#2#h2tg000028l unplaced-scaffold na na JBHIHT010000052.1 <> na Primary Assembly 3418107 na HG03239#2#h2tg000031l unplaced-scaffold na na JBHIHT010000053.1 <> na Primary Assembly 757163 na HG03239#2#h2tg000032l unplaced-scaffold na na JBHIHT010000054.1 <> na Primary Assembly 119668 na HG03239#2#h2tg000034l unplaced-scaffold na na JBHIHT010000055.1 <> na Primary Assembly 675865 na HG03239#2#h2tg000038l unplaced-scaffold na na JBHIHT010000056.1 <> na Primary Assembly 3240877 na HG03239#2#h2tg000040l unplaced-scaffold na na JBHIHT010000057.1 <> na Primary Assembly 125706 na HG03239#2#h2tg000042l unplaced-scaffold na na JBHIHT010000058.1 <> na Primary Assembly 163344 na HG03239#2#h2tg000044l unplaced-scaffold na na JBHIHT010000059.1 <> na Primary Assembly 439248 na HG03239#2#h2tg000045l unplaced-scaffold na na JBHIHT010000060.1 <> na Primary Assembly 297786 na HG03239#2#h2tg000050l unplaced-scaffold na na JBHIHT010000061.1 <> na Primary Assembly 71509 na HG03239#2#h2tg000052l unplaced-scaffold na na JBHIHT010000062.1 <> na Primary Assembly 85665 na HG03239#2#h2tg000060l unplaced-scaffold na na JBHIHT010000063.1 <> na Primary Assembly 92963 na HG03239#2#h2tg000064l unplaced-scaffold na na JBHIHT010000064.1 <> na Primary Assembly 74822 na HG03239#2#h2tg000068l unplaced-scaffold na na JBHIHT010000065.1 <> na Primary Assembly 82767 na HG03239#2#h2tg000076l unplaced-scaffold na na JBHIHT010000066.1 <> na Primary Assembly 51091 na HG03239#2#h2tg000078l unplaced-scaffold na na JBHIHT010000067.1 <> na Primary Assembly 51198 na HG03239#2#atg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIHT010000068.1 <> na non-nuclear 16569 na