# Assembly name: HG01943_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01943 # Sex: male # Taxid: 9606 # BioSample: SAMN26237499 # BioProject: PRJNA1156981 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIIL01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 67x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042076535.1 # Linked assembly: GCA_042076525.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042076585.1 Primary Assembly ## GCA_042076595.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01943#2#h2tg000012l assembled-molecule 2 Chromosome CM089362.1 <> na Primary Assembly 242297524 na HG01943#2#h2tg000002l assembled-molecule 5 Chromosome CM089363.1 <> na Primary Assembly 183141243 na HG01943#2#h2tg000019l assembled-molecule 10 Chromosome CM089364.1 <> na Primary Assembly 134759153 na HG01943#2#h2tg000007l assembled-molecule 11 Chromosome CM089365.1 <> na Primary Assembly 134937394 na HG01943#2#h2tg000017l assembled-molecule 12 Chromosome CM089366.1 <> na Primary Assembly 133326395 na HG01943#2#h2tg000020l assembled-molecule 16 Chromosome CM089367.1 <> na Primary Assembly 93881220 na HG01943#2#h2tg000025l assembled-molecule 19 Chromosome CM089368.1 <> na Primary Assembly 63494197 na HG01943#2#h2tg000018l assembled-molecule X Chromosome CM089369.1 <> na Primary Assembly 154612698 na HG01943#2#h2tg000001l unplaced-scaffold na na JBHIIL010000001.1 <> na Primary Assembly 146078136 na HG01943#2#h2tg000003l unplaced-scaffold na na JBHIIL010000003.1 <> na Primary Assembly 44200444 na HG01943#2#h2tg000005l unplaced-scaffold na na JBHIIL010000004.1 <> na Primary Assembly 83164957 na HG01943#2#h2tg000006l unplaced-scaffold na na JBHIIL010000005.1 <> na Primary Assembly 40277982 na HG01943#2#h2tg000008l unplaced-scaffold na na JBHIIL010000007.1 <> na Primary Assembly 104662360 na HG01943#2#h2tg000010l unplaced-scaffold na na JBHIIL010000008.1 <> na Primary Assembly 101001042 na HG01943#2#h2tg000013l unplaced-scaffold na na JBHIIL010000009.1 <> na Primary Assembly 107418046 na HG01943#2#h2tg000015l unplaced-scaffold na na JBHIIL010000010.1 <> na Primary Assembly 139362227 na HG01943#2#h2tg000016l unplaced-scaffold na na JBHIIL010000011.1 <> na Primary Assembly 60240789 na HG01943#2#h2tg000027l unplaced-scaffold na na JBHIIL010000014.1 <> na Primary Assembly 50985479 na HG01943#2#h2tg000028l unplaced-scaffold na na JBHIIL010000015.1 <> na Primary Assembly 1402371 na HG01943#2#h2tg000030l unplaced-scaffold na na JBHIIL010000016.1 <> na Primary Assembly 19341352 na HG01943#2#h2tg000032l unplaced-scaffold na na JBHIIL010000017.1 <> na Primary Assembly 3455842 na HG01943#2#h2tg000036l unplaced-scaffold na na JBHIIL010000018.1 <> na Primary Assembly 100499 na HG01943#2#h2tg000037l unplaced-scaffold na na JBHIIL010000019.1 <> na Primary Assembly 113599 na HG01943#2#h2tg000040l unplaced-scaffold na na JBHIIL010000020.1 <> na Primary Assembly 1843077 na HG01943#2#h2tg000044l unplaced-scaffold na na JBHIIL010000021.1 <> na Primary Assembly 4382608 na HG01943#2#h2tg000045l unplaced-scaffold na na JBHIIL010000022.1 <> na Primary Assembly 100640758 na HG01943#2#h2tg000047l unplaced-scaffold na na JBHIIL010000023.1 <> na Primary Assembly 219314 na HG01943#2#h2tg000050l unplaced-scaffold na na JBHIIL010000024.1 <> na Primary Assembly 1028297 na HG01943#2#h2tg000052l unplaced-scaffold na na JBHIIL010000025.1 <> na Primary Assembly 360146 na HG01943#2#h2tg000054l unplaced-scaffold na na JBHIIL010000026.1 <> na Primary Assembly 1391004 na HG01943#2#h2tg000055l unplaced-scaffold na na JBHIIL010000027.1 <> na Primary Assembly 310333 na HG01943#2#h2tg000058l unplaced-scaffold na na JBHIIL010000028.1 <> na Primary Assembly 1553481 na HG01943#2#h2tg000059l unplaced-scaffold na na JBHIIL010000029.1 <> na Primary Assembly 247300 na HG01943#2#h2tg000061l unplaced-scaffold na na JBHIIL010000030.1 <> na Primary Assembly 82113 na HG01943#2#h2tg000065l unplaced-scaffold na na JBHIIL010000031.1 <> na Primary Assembly 73916 na HG01943#2#h2tg000066l unplaced-scaffold na na JBHIIL010000032.1 <> na Primary Assembly 307474 na HG01943#2#h2tg000067l unplaced-scaffold na na JBHIIL010000033.1 <> na Primary Assembly 236814 na HG01943#2#h2tg000068l unplaced-scaffold na na JBHIIL010000034.1 <> na Primary Assembly 257407 na HG01943#2#h2tg000070l unplaced-scaffold na na JBHIIL010000035.1 <> na Primary Assembly 350430 na HG01943#2#h2tg000073l unplaced-scaffold na na JBHIIL010000036.1 <> na Primary Assembly 218868 na HG01943#2#h2tg000077l unplaced-scaffold na na JBHIIL010000037.1 <> na Primary Assembly 428932 na HG01943#2#h2tg000083l unplaced-scaffold na na JBHIIL010000038.1 <> na Primary Assembly 185042 na HG01943#2#h2tg000086l unplaced-scaffold na na JBHIIL010000039.1 <> na Primary Assembly 265624 na HG01943#2#h2tg000091l unplaced-scaffold na na JBHIIL010000040.1 <> na Primary Assembly 193856 na HG01943#2#h2tg000093l unplaced-scaffold na na JBHIIL010000041.1 <> na Primary Assembly 107143 na HG01943#2#h2tg000096l unplaced-scaffold na na JBHIIL010000042.1 <> na Primary Assembly 89432 na HG01943#2#h2tg000098l unplaced-scaffold na na JBHIIL010000043.1 <> na Primary Assembly 105629 na HG01943#2#h2tg000099l unplaced-scaffold na na JBHIIL010000044.1 <> na Primary Assembly 236106 na HG01943#2#h2tg000103l unplaced-scaffold na na JBHIIL010000045.1 <> na Primary Assembly 221408 na HG01943#2#h2tg000107l unplaced-scaffold na na JBHIIL010000046.1 <> na Primary Assembly 94201 na HG01943#2#h2tg000108l unplaced-scaffold na na JBHIIL010000047.1 <> na Primary Assembly 288621 na HG01943#2#h2tg000112l unplaced-scaffold na na JBHIIL010000048.1 <> na Primary Assembly 251638 na HG01943#2#h2tg000118l unplaced-scaffold na na JBHIIL010000049.1 <> na Primary Assembly 85029 na HG01943#2#h2tg000120l unplaced-scaffold na na JBHIIL010000050.1 <> na Primary Assembly 73686 na HG01943#2#h2tg000122l unplaced-scaffold na na JBHIIL010000051.1 <> na Primary Assembly 231073 na HG01943#2#h2tg000123l unplaced-scaffold na na JBHIIL010000052.1 <> na Primary Assembly 64231 na HG01943#2#h2tg000127l unplaced-scaffold na na JBHIIL010000053.1 <> na Primary Assembly 62754 na HG01943#2#h2tg000131l unplaced-scaffold na na JBHIIL010000054.1 <> na Primary Assembly 131093 na HG01943#2#h2tg000138l unplaced-scaffold na na JBHIIL010000055.1 <> na Primary Assembly 65141 na HG01943#2#h2tg000142l unplaced-scaffold na na JBHIIL010000056.1 <> na Primary Assembly 97937 na HG01943#2#h2tg000150l unplaced-scaffold na na JBHIIL010000057.1 <> na Primary Assembly 98280 na HG01943#2#h2tg000151l unplaced-scaffold na na JBHIIL010000058.1 <> na Primary Assembly 55053 na HG01943#2#h2tg000004l unplaced-scaffold na na JBHIIL010000059.1 <> na Primary Assembly 59795464 na HG01943#2#h2tg000009l unplaced-scaffold na na JBHIIL010000060.1 <> na Primary Assembly 140231810 na HG01943#2#h2tg000011l unplaced-scaffold na na JBHIIL010000061.1 <> na Primary Assembly 98680971 na HG01943#2#h2tg000014l unplaced-scaffold na na JBHIIL010000063.1 <> na Primary Assembly 45064948 na HG01943#2#h2tg000021l unplaced-scaffold na na JBHIIL010000066.1 <> na Primary Assembly 57902892 na HG01943#2#h2tg000022l unplaced-scaffold na na JBHIIL010000067.1 <> na Primary Assembly 111012261 na HG01943#2#h2tg000023l unplaced-scaffold na na JBHIIL010000068.1 <> na Primary Assembly 61740361 na HG01943#2#h2tg000024l unplaced-scaffold na na JBHIIL010000069.1 <> na Primary Assembly 24462367 na HG01943#2#h2tg000026l unplaced-scaffold na na JBHIIL010000071.1 <> na Primary Assembly 66372278 na HG01943#2#h2tg000029l unplaced-scaffold na na JBHIIL010000072.1 <> na Primary Assembly 201075941 na HG01943#2#h2tg000031l unplaced-scaffold na na JBHIIL010000073.1 <> na Primary Assembly 875682 na HG01943#2#h2tg000033l unplaced-scaffold na na JBHIIL010000074.1 <> na Primary Assembly 1563152 na HG01943#2#h2tg000034l unplaced-scaffold na na JBHIIL010000075.1 <> na Primary Assembly 230135 na HG01943#2#h2tg000035l unplaced-scaffold na na JBHIIL010000076.1 <> na Primary Assembly 845716 na HG01943#2#h2tg000038l unplaced-scaffold na na JBHIIL010000077.1 <> na Primary Assembly 4858427 na HG01943#2#h2tg000039l unplaced-scaffold na na JBHIIL010000078.1 <> na Primary Assembly 5353179 na HG01943#2#h2tg000041l unplaced-scaffold na na JBHIIL010000079.1 <> na Primary Assembly 1297604 na HG01943#2#h2tg000042l unplaced-scaffold na na JBHIIL010000080.1 <> na Primary Assembly 2379970 na HG01943#2#h2tg000043l unplaced-scaffold na na JBHIIL010000081.1 <> na Primary Assembly 405481 na HG01943#2#h2tg000046l unplaced-scaffold na na JBHIIL010000082.1 <> na Primary Assembly 1444494 na HG01943#2#h2tg000048l unplaced-scaffold na na JBHIIL010000083.1 <> na Primary Assembly 2809721 na HG01943#2#h2tg000049l unplaced-scaffold na na JBHIIL010000084.1 <> na Primary Assembly 248978 na HG01943#2#h2tg000051l unplaced-scaffold na na JBHIIL010000085.1 <> na Primary Assembly 170171 na HG01943#2#h2tg000053l unplaced-scaffold na na JBHIIL010000086.1 <> na Primary Assembly 1965019 na HG01943#2#h2tg000056l unplaced-scaffold na na JBHIIL010000087.1 <> na Primary Assembly 233082 na HG01943#2#h2tg000057l unplaced-scaffold na na JBHIIL010000088.1 <> na Primary Assembly 2882267 na HG01943#2#h2tg000062l unplaced-scaffold na na JBHIIL010000089.1 <> na Primary Assembly 75075 na HG01943#2#h2tg000063l unplaced-scaffold na na JBHIIL010000090.1 <> na Primary Assembly 778540 na HG01943#2#h2tg000064l unplaced-scaffold na na JBHIIL010000091.1 <> na Primary Assembly 273838 na HG01943#2#h2tg000071l unplaced-scaffold na na JBHIIL010000092.1 <> na Primary Assembly 2259916 na HG01943#2#h2tg000072l unplaced-scaffold na na JBHIIL010000093.1 <> na Primary Assembly 212497 na HG01943#2#h2tg000074l unplaced-scaffold na na JBHIIL010000094.1 <> na Primary Assembly 1544261 na HG01943#2#h2tg000078l unplaced-scaffold na na JBHIIL010000095.1 <> na Primary Assembly 118991 na HG01943#2#h2tg000079l unplaced-scaffold na na JBHIIL010000096.1 <> na Primary Assembly 148249 na HG01943#2#h2tg000080l unplaced-scaffold na na JBHIIL010000097.1 <> na Primary Assembly 115144 na HG01943#2#h2tg000081l unplaced-scaffold na na JBHIIL010000098.1 <> na Primary Assembly 893964 na HG01943#2#h2tg000085l unplaced-scaffold na na JBHIIL010000099.1 <> na Primary Assembly 76627 na HG01943#2#h2tg000089l unplaced-scaffold na na JBHIIL010000100.1 <> na Primary Assembly 86807 na HG01943#2#h2tg000090l unplaced-scaffold na na JBHIIL010000101.1 <> na Primary Assembly 86018 na HG01943#2#h2tg000094l unplaced-scaffold na na JBHIIL010000102.1 <> na Primary Assembly 442144 na HG01943#2#h2tg000095l unplaced-scaffold na na JBHIIL010000103.1 <> na Primary Assembly 211468 na HG01943#2#h2tg000100l unplaced-scaffold na na JBHIIL010000104.1 <> na Primary Assembly 143459 na HG01943#2#h2tg000101l unplaced-scaffold na na JBHIIL010000105.1 <> na Primary Assembly 87122 na HG01943#2#h2tg000102l unplaced-scaffold na na JBHIIL010000106.1 <> na Primary Assembly 142118 na HG01943#2#h2tg000104l unplaced-scaffold na na JBHIIL010000107.1 <> na Primary Assembly 181402 na HG01943#2#h2tg000106l unplaced-scaffold na na JBHIIL010000108.1 <> na Primary Assembly 96275 na HG01943#2#h2tg000109l unplaced-scaffold na na JBHIIL010000109.1 <> na Primary Assembly 208006 na HG01943#2#h2tg000110l unplaced-scaffold na na JBHIIL010000110.1 <> na Primary Assembly 354608 na HG01943#2#h2tg000111l unplaced-scaffold na na JBHIIL010000111.1 <> na Primary Assembly 97364 na HG01943#2#h2tg000115l unplaced-scaffold na na JBHIIL010000112.1 <> na Primary Assembly 192854 na HG01943#2#h2tg000116l unplaced-scaffold na na JBHIIL010000113.1 <> na Primary Assembly 59653 na HG01943#2#h2tg000117l unplaced-scaffold na na JBHIIL010000114.1 <> na Primary Assembly 235689 na HG01943#2#h2tg000124l unplaced-scaffold na na JBHIIL010000115.1 <> na Primary Assembly 82472 na HG01943#2#h2tg000125l unplaced-scaffold na na JBHIIL010000116.1 <> na Primary Assembly 70474 na HG01943#2#h2tg000129l unplaced-scaffold na na JBHIIL010000117.1 <> na Primary Assembly 99341 na HG01943#2#h2tg000130l unplaced-scaffold na na JBHIIL010000118.1 <> na Primary Assembly 157385 na HG01943#2#h2tg000132l unplaced-scaffold na na JBHIIL010000119.1 <> na Primary Assembly 150858 na HG01943#2#h2tg000133l unplaced-scaffold na na JBHIIL010000120.1 <> na Primary Assembly 84797 na HG01943#2#h2tg000135l unplaced-scaffold na na JBHIIL010000121.1 <> na Primary Assembly 120791 na HG01943#2#h2tg000137l unplaced-scaffold na na JBHIIL010000122.1 <> na Primary Assembly 123007 na HG01943#2#h2tg000139l unplaced-scaffold na na JBHIIL010000123.1 <> na Primary Assembly 52889 na HG01943#2#h2tg000144l unplaced-scaffold na na JBHIIL010000124.1 <> na Primary Assembly 55042 na HG01943#2#h2tg000146l unplaced-scaffold na na JBHIIL010000125.1 <> na Primary Assembly 53458 na HG01943#2#h2tg000155l unplaced-scaffold na na JBHIIL010000126.1 <> na Primary Assembly 67281 na HG01943#2#atg000003l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIIL010000127.1 <> na non-nuclear 16567 na