# Assembly name: ASM4388028v1 # Organism name: Doryrhina cyclops (cyclops roundleaf bat) # Infraspecific name: ecotype=Cote d'Ivoire # Isolate: 20210929_DDa # Sex: female # Taxid: 249021 # BioSample: SAMN33372470 # BioProject: PRJNA936821 # Submitter: Bat1K # Date: 2024-10-28 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JARCLX01 # Assembly method: HiCanu v. 2.1; purge-dups v. 1.2.3; salsa v. 2.2; deepvariant v. 1.2.0; bcftools v. 1.12 # Expected final version: yes # Genome coverage: 26x # Sequencing technology: PacBio Sequel; Illumina NovaSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_043880285.1 # Linked assembly: GCA_043880225.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_043880405.1 Primary Assembly ## GCA_043880415.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name manual_scaffold_1 assembled-molecule 1 Chromosome CM093760.1 <> na Primary Assembly 238799895 na manual_scaffold_2 assembled-molecule 2 Chromosome CM093761.1 <> na Primary Assembly 235499536 na manual_scaffold_3 assembled-molecule 3 Chromosome CM093762.1 <> na Primary Assembly 220386877 na manual_scaffold_4 assembled-molecule 4 Chromosome CM093763.1 <> na Primary Assembly 216506504 na manual_scaffold_5 assembled-molecule 5 Chromosome CM093764.1 <> na Primary Assembly 186278636 na manual_scaffold_6 assembled-molecule 6 Chromosome CM093765.1 <> na Primary Assembly 154073572 na manual_scaffold_7 assembled-molecule 7 Chromosome CM093766.1 <> na Primary Assembly 151175205 na manual_scaffold_8 assembled-molecule 8 Chromosome CM093767.1 <> na Primary Assembly 146863324 na manual_scaffold_9 assembled-molecule 9 Chromosome CM093768.1 <> na Primary Assembly 142487626 na manual_scaffold_10 assembled-molecule 10 Chromosome CM093769.1 <> na Primary Assembly 131835062 na manual_scaffold_11 assembled-molecule 11 Chromosome CM093770.1 <> na Primary Assembly 117651050 na manual_scaffold_12 assembled-molecule 12 Chromosome CM093771.1 <> na Primary Assembly 105834360 na manual_scaffold_13 assembled-molecule 13 Chromosome CM093772.1 <> na Primary Assembly 103713259 na manual_scaffold_14 assembled-molecule 14 Chromosome CM093773.1 <> na Primary Assembly 89012899 na manual_scaffold_15 assembled-molecule 15 Chromosome CM093774.1 <> na Primary Assembly 66195797 na manual_scaffold_16 assembled-molecule 16 Chromosome CM093775.1 <> na Primary Assembly 34216962 na manual_scaffold_17 assembled-molecule 17 Chromosome CM093776.1 <> na Primary Assembly 14363118 na manual_scaffold_18 assembled-molecule 18 Chromosome CM093777.1 <> na Primary Assembly 6723160 na manual_scaffold_19 unplaced-scaffold na na JARCLX010000019.1 <> na Primary Assembly 3739980 na manual_scaffold_20 unplaced-scaffold na na JARCLX010000020.1 <> na Primary Assembly 3619617 na manual_scaffold_21 unplaced-scaffold na na JARCLX010000021.1 <> na Primary Assembly 3040130 na manual_scaffold_22 unplaced-scaffold na na JARCLX010000022.1 <> na Primary Assembly 2287234 na manual_scaffold_23 unplaced-scaffold na na JARCLX010000023.1 <> na Primary Assembly 1955480 na manual_scaffold_24 unplaced-scaffold na na JARCLX010000024.1 <> na Primary Assembly 1867532 na manual_scaffold_25 unplaced-scaffold na na JARCLX010000025.1 <> na Primary Assembly 1421610 na manual_scaffold_26 unplaced-scaffold na na JARCLX010000026.1 <> na Primary Assembly 1310675 na manual_scaffold_27 unplaced-scaffold na na JARCLX010000027.1 <> na Primary Assembly 1286939 na manual_scaffold_28 unplaced-scaffold na na JARCLX010000028.1 <> na Primary Assembly 1066913 na manual_scaffold_29 unplaced-scaffold na na JARCLX010000029.1 <> na Primary Assembly 965170 na manual_scaffold_30 unplaced-scaffold na na JARCLX010000030.1 <> na Primary Assembly 893025 na manual_scaffold_31 unplaced-scaffold na na JARCLX010000031.1 <> na Primary Assembly 570241 na manual_scaffold_32 unplaced-scaffold na na JARCLX010000032.1 <> na Primary Assembly 491552 na manual_scaffold_33 unplaced-scaffold na na JARCLX010000033.1 <> na Primary Assembly 443656 na manual_scaffold_34 unplaced-scaffold na na JARCLX010000034.1 <> na Primary Assembly 373617 na manual_scaffold_35 unplaced-scaffold na na JARCLX010000035.1 <> na Primary Assembly 360773 na manual_scaffold_36 unplaced-scaffold na na JARCLX010000036.1 <> na Primary Assembly 349345 na manual_scaffold_37 unplaced-scaffold na na JARCLX010000037.1 <> na Primary Assembly 320247 na manual_scaffold_38 unplaced-scaffold na na JARCLX010000038.1 <> na Primary Assembly 199702 na manual_scaffold_39 unplaced-scaffold na na JARCLX010000039.1 <> na Primary Assembly 192671 na manual_scaffold_40 unplaced-scaffold na na JARCLX010000040.1 <> na Primary Assembly 174843 na manual_scaffold_41 unplaced-scaffold na na JARCLX010000041.1 <> na Primary Assembly 166899 na manual_scaffold_42 unplaced-scaffold na na JARCLX010000042.1 <> na Primary Assembly 165650 na manual_scaffold_43 unplaced-scaffold na na JARCLX010000043.1 <> na Primary Assembly 162753 na manual_scaffold_44 unplaced-scaffold na na JARCLX010000044.1 <> na Primary Assembly 153219 na manual_scaffold_45 unplaced-scaffold na na JARCLX010000045.1 <> na Primary Assembly 150600 na manual_scaffold_46 unplaced-scaffold na na JARCLX010000046.1 <> na Primary Assembly 134900 na manual_scaffold_47 unplaced-scaffold na na JARCLX010000047.1 <> na Primary Assembly 117601 na manual_scaffold_48 unplaced-scaffold na na JARCLX010000048.1 <> na Primary Assembly 105142 na manual_scaffold_49 unplaced-scaffold na na JARCLX010000049.1 <> na Primary Assembly 98248 na manual_scaffold_50 unplaced-scaffold na na JARCLX010000050.1 <> na Primary Assembly 97233 na manual_scaffold_51 unplaced-scaffold na na JARCLX010000051.1 <> na Primary Assembly 90701 na manual_scaffold_52 unplaced-scaffold na na JARCLX010000052.1 <> na Primary Assembly 70616 na manual_scaffold_53 unplaced-scaffold na na JARCLX010000053.1 <> na Primary Assembly 62052 na manual_scaffold_54 unplaced-scaffold na na JARCLX010000054.1 <> na Primary Assembly 61258 na manual_scaffold_55 unplaced-scaffold na na JARCLX010000055.1 <> na Primary Assembly 58219 na manual_scaffold_56 unplaced-scaffold na na JARCLX010000056.1 <> na Primary Assembly 55946 na manual_scaffold_57 unplaced-scaffold na na JARCLX010000057.1 <> na Primary Assembly 47306 na manual_scaffold_58 unplaced-scaffold na na JARCLX010000058.1 <> na Primary Assembly 45859 na manual_scaffold_59 unplaced-scaffold na na JARCLX010000059.1 <> na Primary Assembly 41072 na manual_scaffold_60 unplaced-scaffold na na JARCLX010000060.1 <> na Primary Assembly 39322 na manual_scaffold_61 unplaced-scaffold na na JARCLX010000061.1 <> na Primary Assembly 34495 na manual_scaffold_62 unplaced-scaffold na na JARCLX010000062.1 <> na Primary Assembly 29523 na manual_scaffold_63 unplaced-scaffold na na JARCLX010000063.1 <> na Primary Assembly 28136 na manual_scaffold_65 unplaced-scaffold na na JARCLX010000064.1 <> na Primary Assembly 17919 na manual_scaffold_66 unplaced-scaffold na na JARCLX010000065.1 <> na Primary Assembly 5170 na ptg000005l_rotated assembled-molecule MT Mitochondrion CM093779.1 <> na non-nuclear 17030 na