# Assembly name:  calJac220_alt
# Organism name:  Callithrix jacchus (white-tufted-ear marmoset)
# Isolate:  220
# Sex:  female
# Taxid:          9483
# BioSample:      SAMN47004744
# BioProject:     PRJNA1229127
# Submitter:      University of California Santa Cruz
# Date:           2025-04-08
# Assembly type:  alternate-pseudohaplotype
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBLWJC01
# Assembly method: Verkko v. 2.2.1
# Expected final version: no
# Genome coverage: 60x
# Sequencing technology: Oxford Nanopore; PacBio RSII; Illumina NovaSeq
# GenBank assembly accession: GCA_049354675.1
# Linked assembly: GCA_049354665.1 (principal pseudohaplotype of diploid)
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_049354705.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
alt_chr1	assembled-molecule	1	Chromosome	CM111762.1	<>	na	Primary Assembly	219690559	na
alt_chr2	assembled-molecule	2	Chromosome	CM111763.1	<>	na	Primary Assembly	206337820	na
alt_chr3	assembled-molecule	3	Chromosome	CM111764.1	<>	na	Primary Assembly	194243609	na
alt_chr4	assembled-molecule	4	Chromosome	CM111765.1	<>	na	Primary Assembly	178242096	na
alt_chr5	assembled-molecule	5	Chromosome	CM111766.1	<>	na	Primary Assembly	166950706	na
alt_chr6	assembled-molecule	6	Chromosome	CM111767.1	<>	na	Primary Assembly	164159647	na
alt_chr7	assembled-molecule	7	Chromosome	CM111768.1	<>	na	Primary Assembly	160170040	na
alt_chr8	assembled-molecule	8	Chromosome	CM111769.1	<>	na	Primary Assembly	142506461	na
alt_chr9	assembled-molecule	9	Chromosome	CM111770.1	<>	na	Primary Assembly	136779217	na
alt_chr10	assembled-molecule	10	Chromosome	CM111771.1	<>	na	Primary Assembly	132082805	na
alt_chr11	assembled-molecule	11	Chromosome	CM111772.1	<>	na	Primary Assembly	130352453	na
alt_chr12	assembled-molecule	12	Chromosome	CM111773.1	<>	na	Primary Assembly	128039947	na
alt_chr13	assembled-molecule	13	Chromosome	CM111774.1	<>	na	Primary Assembly	124342584	na
alt_chr14	assembled-molecule	14	Chromosome	CM111775.1	<>	na	Primary Assembly	115753819	na
alt_chr15	assembled-molecule	15	Chromosome	CM111776.1	<>	na	Primary Assembly	103910328	na
alt_chr16	assembled-molecule	16	Chromosome	CM111777.1	<>	na	Primary Assembly	100430648	na
alt_chr17	assembled-molecule	17	Chromosome	CM111778.1	<>	na	Primary Assembly	86448252	na
alt_chr18	assembled-molecule	18	Chromosome	CM111779.1	<>	na	Primary Assembly	51490755	na
alt_chr19	assembled-molecule	19	Chromosome	CM111780.1	<>	na	Primary Assembly	56895502	na
alt_chr20	assembled-molecule	20	Chromosome	CM111781.1	<>	na	Primary Assembly	55307562	na
alt_chr21	assembled-molecule	21	Chromosome	CM111782.1	<>	na	Primary Assembly	53757363	na
alt_chr22	assembled-molecule	22	Chromosome	CM111783.1	<>	na	Primary Assembly	51907069	na
alt_chrX	assembled-molecule	X	Chromosome	CM111784.1	<>	na	Primary Assembly	149020582	na