# Assembly name:  rChiChi1.pri
# Organism name:  Chitra chitra (turtles)
# Isolate:  rChiChi1
# Sex:  male
# Taxid:          171799
# BioSample:      SAMN50608594
# BioProject:     PRJNA1305517
# Submitter:      Vertebrate Genomes Project
# Date:           2025-09-12
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBQTKJ01
# Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy0; yahs v. 1.2a.2 + galaxy2
# Expected final version: no
# Genome coverage: 73.0x
# Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_052575445.1
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_052575545.1		Primary Assembly
## GCA_052575555.1		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	CM127188.1	<>	na	Primary Assembly	346862675	na
SUPER_2	assembled-molecule	2	Chromosome	CM127189.1	<>	na	Primary Assembly	264122209	na
SUPER_3	assembled-molecule	3	Chromosome	CM127190.1	<>	na	Primary Assembly	200102900	na
SUPER_4	assembled-molecule	4	Chromosome	CM127191.1	<>	na	Primary Assembly	137157094	na
SUPER_5	assembled-molecule	5	Chromosome	CM127192.1	<>	na	Primary Assembly	131745378	na
SUPER_6	assembled-molecule	6	Chromosome	CM127193.1	<>	na	Primary Assembly	131477372	na
SUPER_7	assembled-molecule	7	Chromosome	CM127194.1	<>	na	Primary Assembly	78634236	na
SUPER_8	assembled-molecule	8	Chromosome	CM127195.1	<>	na	Primary Assembly	75397424	na
SUPER_9	assembled-molecule	9	Chromosome	CM127196.1	<>	na	Primary Assembly	68374300	na
SUPER_10	assembled-molecule	10	Chromosome	CM127197.1	<>	na	Primary Assembly	57599801	na
SUPER_11	assembled-molecule	11	Chromosome	CM127198.1	<>	na	Primary Assembly	54043287	na
SUPER_12	assembled-molecule	12	Chromosome	CM127199.1	<>	na	Primary Assembly	49698563	na
SUPER_13	assembled-molecule	13	Chromosome	CM127200.1	<>	na	Primary Assembly	48668355	na
SUPER_14	assembled-molecule	14	Chromosome	CM127201.1	<>	na	Primary Assembly	47523000	na
SUPER_15	assembled-molecule	15	Chromosome	CM127202.1	<>	na	Primary Assembly	42993496	na
SUPER_16	assembled-molecule	16	Chromosome	CM127203.1	<>	na	Primary Assembly	42014871	na
SUPER_17	assembled-molecule	17	Chromosome	CM127204.1	<>	na	Primary Assembly	37492649	na
SUPER_18	assembled-molecule	18	Chromosome	CM127205.1	<>	na	Primary Assembly	36811149	na
SUPER_19	assembled-molecule	19	Chromosome	CM127206.1	<>	na	Primary Assembly	30824328	na
SUPER_20	assembled-molecule	20	Chromosome	CM127207.1	<>	na	Primary Assembly	27836075	na
SUPER_21	assembled-molecule	21	Chromosome	CM127208.1	<>	na	Primary Assembly	27802044	na
SUPER_22	assembled-molecule	22	Chromosome	CM127209.1	<>	na	Primary Assembly	26168769	na
SUPER_23	assembled-molecule	23	Chromosome	CM127210.1	<>	na	Primary Assembly	25456455	na
SUPER_24	assembled-molecule	24	Chromosome	CM127211.1	<>	na	Primary Assembly	22986191	na
SUPER_25	assembled-molecule	25	Chromosome	CM127212.1	<>	na	Primary Assembly	20490143	na
SUPER_26	assembled-molecule	26	Chromosome	CM127213.1	<>	na	Primary Assembly	19337105	na
SUPER_27	assembled-molecule	27	Chromosome	CM127214.1	<>	na	Primary Assembly	18862254	na
SUPER_28	assembled-molecule	28	Chromosome	CM127215.1	<>	na	Primary Assembly	17325156	na
SUPER_29	assembled-molecule	29	Chromosome	CM127216.1	<>	na	Primary Assembly	16851695	na
SUPER_30	assembled-molecule	30	Chromosome	CM127217.1	<>	na	Primary Assembly	16651080	na
SUPER_31	assembled-molecule	31	Chromosome	CM127218.1	<>	na	Primary Assembly	16651079	na
SUPER_32	assembled-molecule	32	Chromosome	CM127219.1	<>	na	Primary Assembly	14239348	na
SUPER_Z	assembled-molecule	Z	Chromosome	CM127220.1	<>	na	Primary Assembly	38823581	na
SUPER_6_unloc_1	unlocalized-scaffold	6	Chromosome	JBQTKJ010000034.1	<>	na	Primary Assembly	133744	na
Scaffold_33	unplaced-scaffold	na	na	JBQTKJ010000035.1	<>	na	Primary Assembly	71880	na
Scaffold_34	unplaced-scaffold	na	na	JBQTKJ010000036.1	<>	na	Primary Assembly	26255	na
atg000001l_rotated	assembled-molecule	MT	Mitochondrion	CM127243.1	<>	na	non-nuclear	16774	na