# Assembly name: fSpaAur1.2 # Organism name: Sparus aurata (gilthead seabream) # Taxid: 8175 # BioSample: SAMEA104384835 # BioProject: PRJEB31901 # Submitter: Wellcome Sanger Institute # Date: 2021-04-24 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAAHFC02 # Genome coverage: 56x # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900880675.2 # Linked assembly: GCA_900880695.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900880674.2 Primary Assembly ## GCA_900880676.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Super_scaffold_1 assembled-molecule 1 Chromosome LR537121.1 <> na Primary Assembly 41035582 na Super_scaffold_13 assembled-molecule 2 Chromosome LR537122.1 <> na Primary Assembly 36133474 na Super_scaffold_11 assembled-molecule 3 Chromosome LR537123.1 <> na Primary Assembly 32888385 na Super_scaffold_3 assembled-molecule 4 Chromosome LR537124.1 <> na Primary Assembly 41392777 na Super_scaffold_9 assembled-molecule 5 Chromosome LR537125.1 <> na Primary Assembly 38249111 na Super_scaffold_5 assembled-molecule 6 Chromosome LR537126.1 <> na Primary Assembly 40124345 na Super_scaffold_7 assembled-molecule 7 Chromosome LR537127.1 <> na Primary Assembly 35997798 na Super_scaffold_6 assembled-molecule 8 Chromosome LR537128.1 <> na Primary Assembly 36959192 na Super_scaffold_21 assembled-molecule 9 Chromosome LR537129.1 <> na Primary Assembly 37012328 na Super_scaffold_18 assembled-molecule 10 Chromosome LR537130.1 <> na Primary Assembly 35512760 na Super_scaffold_4 assembled-molecule 11 Chromosome LR537131.1 <> na Primary Assembly 35380617 na Super_scaffold_12 assembled-molecule 12 Chromosome LR537132.1 <> na Primary Assembly 30193437 na Super_scaffold_14 assembled-molecule 13 Chromosome LR537133.1 <> na Primary Assembly 35791275 na Super_scaffold_23 assembled-molecule 14 Chromosome LR537134.1 <> na Primary Assembly 25861820 na Super_scaffold_15 assembled-molecule 15 Chromosome LR537135.1 <> na Primary Assembly 31859785 na Super_scaffold_22 assembled-molecule 16 Chromosome LR537136.1 <> na Primary Assembly 30078578 na Super_scaffold_16 assembled-molecule 17 Chromosome LR537137.1 <> na Primary Assembly 37948182 na Super_scaffold_10 assembled-molecule 18 Chromosome LR537138.1 <> na Primary Assembly 37104330 na Super_scaffold_20 assembled-molecule 19 Chromosome LR537139.1 <> na Primary Assembly 31047742 na Super_scaffold_19 assembled-molecule 20 Chromosome LR537140.1 <> na Primary Assembly 28386240 na Super_scaffold_17 assembled-molecule 21 Chromosome LR537141.1 <> na Primary Assembly 35160130 na Super_scaffold_24 assembled-molecule 22 Chromosome LR537142.1 <> na Primary Assembly 31425404 na Super_scaffold_8 assembled-molecule 23 Chromosome LR537143.1 <> na Primary Assembly 30526999 na Super_scaffold_2 assembled-molecule 24 Chromosome LR537144.1 <> na Primary Assembly 22435136 na contig1 unplaced-scaffold na na CAAHFC020000001.1 <> na Primary Assembly 423250 na contig2 unplaced-scaffold na na CAAHFC020000002.1 <> na Primary Assembly 417322 na contig3 unplaced-scaffold na na CAAHFC020000003.1 <> na Primary Assembly 392191 na contig4 unplaced-scaffold na na CAAHFC020000004.1 <> na Primary Assembly 366039 na contig5 unplaced-scaffold na na CAAHFC020000005.1 <> na Primary Assembly 343555 na contig6 unplaced-scaffold na na CAAHFC020000006.1 <> na Primary Assembly 317248 na contig7 unplaced-scaffold na na CAAHFC020000007.1 <> na Primary Assembly 317227 na contig8 unplaced-scaffold na na CAAHFC020000008.1 <> na Primary Assembly 310298 na contig9 unplaced-scaffold na na CAAHFC020000009.1 <> na Primary Assembly 301216 na contig10 unplaced-scaffold na na CAAHFC020000010.1 <> na Primary Assembly 298920 na contig11 unplaced-scaffold na na CAAHFC020000011.1 <> na Primary Assembly 276901 na contig12 unplaced-scaffold na na CAAHFC020000012.1 <> na Primary Assembly 262853 na contig13 unplaced-scaffold na na CAAHFC020000013.1 <> na Primary Assembly 260828 na contig14 unplaced-scaffold na na CAAHFC020000014.1 <> na Primary Assembly 233782 na contig15 unplaced-scaffold na na CAAHFC020000015.1 <> na Primary Assembly 232415 na contig16 unplaced-scaffold na na CAAHFC020000016.1 <> na Primary Assembly 218624 na contig17 unplaced-scaffold na na CAAHFC020000017.1 <> na Primary Assembly 216807 na contig18 unplaced-scaffold na na CAAHFC020000018.1 <> na Primary Assembly 193988 na contig19 unplaced-scaffold na na CAAHFC020000019.1 <> na Primary Assembly 190138 na contig20 unplaced-scaffold na na CAAHFC020000020.1 <> na Primary Assembly 189718 na contig21 unplaced-scaffold na na CAAHFC020000021.1 <> na Primary Assembly 177197 na contig22 unplaced-scaffold na na CAAHFC020000022.1 <> na Primary Assembly 177120 na contig23 unplaced-scaffold na na CAAHFC020000023.1 <> na Primary Assembly 173598 na contig24 unplaced-scaffold na na CAAHFC020000024.1 <> na Primary Assembly 163330 na contig25 unplaced-scaffold na na CAAHFC020000025.1 <> na Primary Assembly 160859 na contig26 unplaced-scaffold na na CAAHFC020000026.1 <> na Primary Assembly 158698 na contig27 unplaced-scaffold na na CAAHFC020000027.1 <> na Primary Assembly 157380 na contig28 unplaced-scaffold na na CAAHFC020000028.1 <> na Primary Assembly 147298 na contig29 unplaced-scaffold na na CAAHFC020000029.1 <> na Primary Assembly 141590 na contig30 unplaced-scaffold na na CAAHFC020000030.1 <> na Primary Assembly 138454 na contig31 unplaced-scaffold na na CAAHFC020000031.1 <> na Primary Assembly 137540 na contig32 unplaced-scaffold na na CAAHFC020000032.1 <> na Primary Assembly 132279 na contig33 unplaced-scaffold na na CAAHFC020000033.1 <> na Primary Assembly 131620 na contig34 unplaced-scaffold na na CAAHFC020000034.1 <> na Primary Assembly 128841 na contig35 unplaced-scaffold na na CAAHFC020000035.1 <> na Primary Assembly 127140 na contig36 unplaced-scaffold na na CAAHFC020000036.1 <> na Primary Assembly 126783 na contig37 unplaced-scaffold na na CAAHFC020000037.1 <> na Primary Assembly 123694 na contig38 unplaced-scaffold na na CAAHFC020000038.1 <> na Primary Assembly 122180 na contig39 unplaced-scaffold na na CAAHFC020000039.1 <> na Primary Assembly 121153 na contig40 unplaced-scaffold na na CAAHFC020000040.1 <> na Primary Assembly 121314 na contig41 unplaced-scaffold na na CAAHFC020000041.1 <> na Primary Assembly 119712 na contig42 unplaced-scaffold na na CAAHFC020000042.1 <> na Primary Assembly 119376 na contig43 unplaced-scaffold na na CAAHFC020000043.1 <> na Primary Assembly 119061 na contig44 unplaced-scaffold na na CAAHFC020000044.1 <> na Primary Assembly 117604 na contig45 unplaced-scaffold na na CAAHFC020000045.1 <> na Primary Assembly 116722 na contig46 unplaced-scaffold na na CAAHFC020000046.1 <> na Primary Assembly 116212 na contig47 unplaced-scaffold na na CAAHFC020000047.1 <> na Primary Assembly 113463 na contig48 unplaced-scaffold na na CAAHFC020000048.1 <> na Primary Assembly 113443 na contig49 unplaced-scaffold na na CAAHFC020000049.1 <> na Primary Assembly 108829 na contig50 unplaced-scaffold na na CAAHFC020000050.1 <> na Primary Assembly 108896 na contig51 unplaced-scaffold na na CAAHFC020000051.1 <> na Primary Assembly 107150 na contig52 unplaced-scaffold na na CAAHFC020000052.1 <> na Primary Assembly 104158 na contig53 unplaced-scaffold na na CAAHFC020000053.1 <> na Primary Assembly 102518 na contig54 unplaced-scaffold na na CAAHFC020000054.1 <> na Primary Assembly 94759 na contig55 unplaced-scaffold na na CAAHFC020000055.1 <> na Primary Assembly 93944 na contig56 unplaced-scaffold na na CAAHFC020000056.1 <> na Primary Assembly 93050 na contig57 unplaced-scaffold na na CAAHFC020000057.1 <> na Primary Assembly 91954 na contig58 unplaced-scaffold na na CAAHFC020000058.1 <> na Primary Assembly 83876 na contig59 unplaced-scaffold na na CAAHFC020000059.1 <> na Primary Assembly 82649 na contig60 unplaced-scaffold na na CAAHFC020000060.1 <> na Primary Assembly 80752 na contig61 unplaced-scaffold na na CAAHFC020000061.1 <> na Primary Assembly 78132 na contig62 unplaced-scaffold na na CAAHFC020000062.1 <> na Primary Assembly 78172 na contig63 unplaced-scaffold na na CAAHFC020000063.1 <> na Primary Assembly 75833 na contig64 unplaced-scaffold na na CAAHFC020000064.1 <> na Primary Assembly 74533 na contig65 unplaced-scaffold na na CAAHFC020000065.1 <> na Primary Assembly 68917 na contig66 unplaced-scaffold na na CAAHFC020000066.1 <> na Primary Assembly 67553 na contig67 unplaced-scaffold na na CAAHFC020000067.1 <> na Primary Assembly 66278 na contig68 unplaced-scaffold na na CAAHFC020000068.1 <> na Primary Assembly 64670 na contig69 unplaced-scaffold na na CAAHFC020000069.1 <> na Primary Assembly 62739 na contig70 unplaced-scaffold na na CAAHFC020000070.1 <> na Primary Assembly 60726 na contig71 unplaced-scaffold na na CAAHFC020000071.1 <> na Primary Assembly 60705 na contig72 unplaced-scaffold na na CAAHFC020000072.1 <> na Primary Assembly 58424 na contig73 unplaced-scaffold na na CAAHFC020000073.1 <> na Primary Assembly 58234 na contig74 unplaced-scaffold na na CAAHFC020000074.1 <> na Primary Assembly 52844 na contig75 unplaced-scaffold na na CAAHFC020000075.1 <> na Primary Assembly 50719 na contig76 unplaced-scaffold na na CAAHFC020000076.1 <> na Primary Assembly 50706 na contig77 unplaced-scaffold na na CAAHFC020000077.1 <> na Primary Assembly 50407 na contig78 unplaced-scaffold na na CAAHFC020000078.1 <> na Primary Assembly 48720 na contig79 unplaced-scaffold na na CAAHFC020000079.1 <> na Primary Assembly 47831 na contig80 unplaced-scaffold na na CAAHFC020000080.1 <> na Primary Assembly 47122 na contig81 unplaced-scaffold na na CAAHFC020000081.1 <> na Primary Assembly 46728 na contig82 unplaced-scaffold na na CAAHFC020000082.1 <> na Primary Assembly 45624 na contig83 unplaced-scaffold na na CAAHFC020000083.1 <> na Primary Assembly 44143 na contig84 unplaced-scaffold na na CAAHFC020000084.1 <> na Primary Assembly 43087 na contig85 unplaced-scaffold na na CAAHFC020000085.1 <> na Primary Assembly 41546 na contig86 unplaced-scaffold na na CAAHFC020000086.1 <> na Primary Assembly 41387 na contig87 unplaced-scaffold na na CAAHFC020000087.1 <> na Primary Assembly 40994 na contig88 unplaced-scaffold na na CAAHFC020000088.1 <> na Primary Assembly 40787 na contig89 unplaced-scaffold na na CAAHFC020000089.1 <> na Primary Assembly 40526 na contig90 unplaced-scaffold na na CAAHFC020000090.1 <> na Primary Assembly 39651 na contig91 unplaced-scaffold na na CAAHFC020000091.1 <> na Primary Assembly 39428 na contig92 unplaced-scaffold na na CAAHFC020000092.1 <> na Primary Assembly 39477 na contig93 unplaced-scaffold na na CAAHFC020000093.1 <> na Primary Assembly 39451 na contig94 unplaced-scaffold na na CAAHFC020000094.1 <> na Primary Assembly 39088 na contig95 unplaced-scaffold na na CAAHFC020000095.1 <> na Primary Assembly 38600 na contig96 unplaced-scaffold na na CAAHFC020000096.1 <> na Primary Assembly 37769 na contig97 unplaced-scaffold na na CAAHFC020000097.1 <> na Primary Assembly 37692 na contig98 unplaced-scaffold na na CAAHFC020000098.1 <> na Primary Assembly 37517 na contig99 unplaced-scaffold na na CAAHFC020000099.1 <> na Primary Assembly 37432 na contig100 unplaced-scaffold na na CAAHFC020000100.1 <> na Primary Assembly 37242 na contig101 unplaced-scaffold na na CAAHFC020000101.1 <> na Primary Assembly 36688 na contig102 unplaced-scaffold na na CAAHFC020000102.1 <> na Primary Assembly 36352 na contig103 unplaced-scaffold na na CAAHFC020000103.1 <> na Primary Assembly 36319 na contig104 unplaced-scaffold na na CAAHFC020000104.1 <> na Primary Assembly 36106 na contig105 unplaced-scaffold na na CAAHFC020000105.1 <> na Primary Assembly 36069 na contig106 unplaced-scaffold na na CAAHFC020000106.1 <> na Primary Assembly 33685 na contig107 unplaced-scaffold na na CAAHFC020000107.1 <> na Primary Assembly 33320 na contig108 unplaced-scaffold na na CAAHFC020000108.1 <> na Primary Assembly 33103 na contig109 unplaced-scaffold na na CAAHFC020000109.1 <> na Primary Assembly 33113 na contig110 unplaced-scaffold na na CAAHFC020000110.1 <> na Primary Assembly 32114 na contig111 unplaced-scaffold na na CAAHFC020000111.1 <> na Primary Assembly 31225 na contig112 unplaced-scaffold na na CAAHFC020000112.1 <> na Primary Assembly 30581 na contig113 unplaced-scaffold na na CAAHFC020000113.1 <> na Primary Assembly 30734 na contig114 unplaced-scaffold na na CAAHFC020000114.1 <> na Primary Assembly 30737 na contig115 unplaced-scaffold na na CAAHFC020000115.1 <> na Primary Assembly 30070 na contig116 unplaced-scaffold na na CAAHFC020000116.1 <> na Primary Assembly 29948 na contig117 unplaced-scaffold na na CAAHFC020000117.1 <> na Primary Assembly 29658 na contig118 unplaced-scaffold na na CAAHFC020000118.1 <> na Primary Assembly 29289 na contig119 unplaced-scaffold na na CAAHFC020000119.1 <> na Primary Assembly 28888 na contig120 unplaced-scaffold na na CAAHFC020000120.1 <> na Primary Assembly 28644 na contig121 unplaced-scaffold na na CAAHFC020000121.1 <> na Primary Assembly 28577 na contig122 unplaced-scaffold na na CAAHFC020000122.1 <> na Primary Assembly 27983 na contig123 unplaced-scaffold na na CAAHFC020000123.1 <> na Primary Assembly 28029 na contig124 unplaced-scaffold na na CAAHFC020000124.1 <> na Primary Assembly 27618 na contig125 unplaced-scaffold na na CAAHFC020000125.1 <> na Primary Assembly 27574 na contig126 unplaced-scaffold na na CAAHFC020000126.1 <> na Primary Assembly 27285 na contig127 unplaced-scaffold na na CAAHFC020000127.1 <> na Primary Assembly 26932 na contig128 unplaced-scaffold na na CAAHFC020000128.1 <> na Primary Assembly 26914 na contig129 unplaced-scaffold na na CAAHFC020000129.1 <> na Primary Assembly 26863 na contig130 unplaced-scaffold na na CAAHFC020000130.1 <> na Primary Assembly 26524 na contig131 unplaced-scaffold na na CAAHFC020000131.1 <> na Primary Assembly 25411 na contig132 unplaced-scaffold na na CAAHFC020000132.1 <> na Primary Assembly 25299 na contig133 unplaced-scaffold na na CAAHFC020000133.1 <> na Primary Assembly 25263 na contig134 unplaced-scaffold na na CAAHFC020000134.1 <> na Primary Assembly 25125 na contig135 unplaced-scaffold na na CAAHFC020000135.1 <> na Primary Assembly 24395 na contig136 unplaced-scaffold na na CAAHFC020000136.1 <> na Primary Assembly 24467 na contig137 unplaced-scaffold na na CAAHFC020000137.1 <> na Primary Assembly 24148 na contig138 unplaced-scaffold na na CAAHFC020000138.1 <> na Primary Assembly 23298 na contig139 unplaced-scaffold na na CAAHFC020000139.1 <> na Primary Assembly 23045 na contig140 unplaced-scaffold na na CAAHFC020000140.1 <> na Primary Assembly 22962 na contig141 unplaced-scaffold na na CAAHFC020000141.1 <> na Primary Assembly 22795 na contig142 unplaced-scaffold na na CAAHFC020000142.1 <> na Primary Assembly 22768 na contig143 unplaced-scaffold na na CAAHFC020000143.1 <> na Primary Assembly 21948 na contig144 unplaced-scaffold na na CAAHFC020000144.1 <> na Primary Assembly 21482 na contig145 unplaced-scaffold na na CAAHFC020000145.1 <> na Primary Assembly 21607 na contig146 unplaced-scaffold na na CAAHFC020000146.1 <> na Primary Assembly 21163 na contig147 unplaced-scaffold na na CAAHFC020000147.1 <> na Primary Assembly 20962 na contig148 unplaced-scaffold na na CAAHFC020000148.1 <> na Primary Assembly 20830 na contig149 unplaced-scaffold na na CAAHFC020000149.1 <> na Primary Assembly 20806 na contig150 unplaced-scaffold na na CAAHFC020000150.1 <> na Primary Assembly 493923 na contig151 unplaced-scaffold na na CAAHFC020000151.1 <> na Primary Assembly 469395 na scaffold_MT assembled-molecule MT Mitochondrion OD909577.1 <> na non-nuclear 16652 na