# Assembly name: ETH_CapCap1 # Organism name: Capreolus capreolus (Western roe deer) # Taxid: 9858 # BioSample: SAMEA112852577 # BioProject: PRJEB61062 # Submitter: ETH ZURICH # Date: 2023-07-15 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: CATOUS01 # Assembly method: hifiasm v0.16 # Genome coverage: 42x # Sequencing technology: PacBio Sequel IIe # RefSeq category: Reference Genome # GenBank assembly accession: GCA_951849835.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_951849834.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name ptg000001l unplaced-scaffold na na CATOUS010000001.1 <> na Primary Assembly 73092050 na ptg000002l unplaced-scaffold na na CATOUS010000002.1 <> na Primary Assembly 29757134 na ptg000003l unplaced-scaffold na na CATOUS010000003.1 <> na Primary Assembly 13699369 na ptg000004l unplaced-scaffold na na CATOUS010000004.1 <> na Primary Assembly 100400979 na ptg000005l unplaced-scaffold na na CATOUS010000005.1 <> na Primary Assembly 58304530 na ptg000006l unplaced-scaffold na na CATOUS010000006.1 <> na Primary Assembly 188743414 na ptg000007l unplaced-scaffold na na CATOUS010000007.1 <> na Primary Assembly 110417572 na ptg000008l unplaced-scaffold na na CATOUS010000008.1 <> na Primary Assembly 24833455 na ptg000009l unplaced-scaffold na na CATOUS010000009.1 <> na Primary Assembly 56458748 na ptg000010l unplaced-scaffold na na CATOUS010000010.1 <> na Primary Assembly 83710495 na ptg000011l unplaced-scaffold na na CATOUS010000011.1 <> na Primary Assembly 71490620 na ptg000012l unplaced-scaffold na na CATOUS010000012.1 <> na Primary Assembly 61384251 na ptg000013l unplaced-scaffold na na CATOUS010000013.1 <> na Primary Assembly 23326895 na ptg000014l unplaced-scaffold na na CATOUS010000014.1 <> na Primary Assembly 103075185 na ptg000015l unplaced-scaffold na na CATOUS010000015.1 <> na Primary Assembly 2798856 na ptg000016l unplaced-scaffold na na CATOUS010000016.1 <> na Primary Assembly 79609169 na ptg000017l unplaced-scaffold na na CATOUS010000017.1 <> na Primary Assembly 51898318 na ptg000018l unplaced-scaffold na na CATOUS010000018.1 <> na Primary Assembly 58166035 na ptg000019l unplaced-scaffold na na CATOUS010000019.1 <> na Primary Assembly 62148412 na ptg000020l unplaced-scaffold na na CATOUS010000020.1 <> na Primary Assembly 84284524 na ptg000021l unplaced-scaffold na na CATOUS010000021.1 <> na Primary Assembly 98604180 na ptg000022l unplaced-scaffold na na CATOUS010000022.1 <> na Primary Assembly 78847352 na ptg000023l unplaced-scaffold na na CATOUS010000023.1 <> na Primary Assembly 68324728 na ptg000024l unplaced-scaffold na na CATOUS010000024.1 <> na Primary Assembly 41541827 na ptg000025l unplaced-scaffold na na CATOUS010000025.1 <> na Primary Assembly 1803485 na ptg000026l unplaced-scaffold na na CATOUS010000026.1 <> na Primary Assembly 5859620 na ptg000027l unplaced-scaffold na na CATOUS010000027.1 <> na Primary Assembly 90506599 na ptg000028l unplaced-scaffold na na CATOUS010000028.1 <> na Primary Assembly 4038700 na ptg000029l unplaced-scaffold na na CATOUS010000029.1 <> na Primary Assembly 20752489 na ptg000030l unplaced-scaffold na na CATOUS010000030.1 <> na Primary Assembly 1255544 na ptg000031l unplaced-scaffold na na CATOUS010000031.1 <> na Primary Assembly 9722324 na ptg000032l unplaced-scaffold na na CATOUS010000032.1 <> na Primary Assembly 68474591 na ptg000033l unplaced-scaffold na na CATOUS010000033.1 <> na Primary Assembly 12689491 na ptg000034l unplaced-scaffold na na CATOUS010000034.1 <> na Primary Assembly 69851389 na ptg000035l unplaced-scaffold na na CATOUS010000035.1 <> na Primary Assembly 1697027 na ptg000036l unplaced-scaffold na na CATOUS010000036.1 <> na Primary Assembly 932414 na ptg000037l unplaced-scaffold na na CATOUS010000037.1 <> na Primary Assembly 4244780 na ptg000038l unplaced-scaffold na na CATOUS010000038.1 <> na Primary Assembly 7247677 na ptg000039l unplaced-scaffold na na CATOUS010000039.1 <> na Primary Assembly 73116396 na ptg000040l unplaced-scaffold na na CATOUS010000040.1 <> na Primary Assembly 5150549 na ptg000041l unplaced-scaffold na na CATOUS010000041.1 <> na Primary Assembly 10848803 na ptg000042l unplaced-scaffold na na CATOUS010000042.1 <> na Primary Assembly 44939040 na ptg000043l unplaced-scaffold na na CATOUS010000043.1 <> na Primary Assembly 28120362 na ptg000044l unplaced-scaffold na na CATOUS010000044.1 <> na Primary Assembly 87155730 na ptg000045l unplaced-scaffold na na CATOUS010000045.1 <> na Primary Assembly 7768478 na ptg000046l unplaced-scaffold na na CATOUS010000046.1 <> na Primary Assembly 8564291 na ptg000047l unplaced-scaffold na na CATOUS010000047.1 <> na Primary Assembly 11753628 na ptg000048l unplaced-scaffold na na CATOUS010000048.1 <> na Primary Assembly 71068314 na ptg000049l unplaced-scaffold na na CATOUS010000049.1 <> na Primary Assembly 1224324 na ptg000050l unplaced-scaffold na na CATOUS010000050.1 <> na Primary Assembly 13829956 na ptg000051l unplaced-scaffold na na CATOUS010000051.1 <> na Primary Assembly 2446122 na ptg000052l unplaced-scaffold na na CATOUS010000052.1 <> na Primary Assembly 1760209 na ptg000053l unplaced-scaffold na na CATOUS010000053.1 <> na Primary Assembly 933262 na ptg000054l unplaced-scaffold na na CATOUS010000054.1 <> na Primary Assembly 51933893 na ptg000055l unplaced-scaffold na na CATOUS010000055.1 <> na Primary Assembly 1721483 na ptg000056l unplaced-scaffold na na CATOUS010000056.1 <> na Primary Assembly 47985835 na ptg000057l unplaced-scaffold na na CATOUS010000057.1 <> na Primary Assembly 107198829 na ptg000058l unplaced-scaffold na na CATOUS010000058.1 <> na Primary Assembly 6896273 na ptg000059l unplaced-scaffold na na CATOUS010000059.1 <> na Primary Assembly 12358814 na ptg000060l unplaced-scaffold na na CATOUS010000060.1 <> na Primary Assembly 63220906 na ptg000061l unplaced-scaffold na na CATOUS010000061.1 <> na Primary Assembly 9801819 na ptg000062l unplaced-scaffold na na CATOUS010000062.1 <> na Primary Assembly 3934260 na ptg000063l unplaced-scaffold na na CATOUS010000063.1 <> na Primary Assembly 17120737 na ptg000064l unplaced-scaffold na na CATOUS010000064.1 <> na Primary Assembly 13684684 na ptg000065l unplaced-scaffold na na CATOUS010000065.1 <> na Primary Assembly 2982842 na ptg000066l unplaced-scaffold na na CATOUS010000066.1 <> na Primary Assembly 2886376 na ptg000067l unplaced-scaffold na na CATOUS010000067.1 <> na Primary Assembly 86882963 na ptg000068l unplaced-scaffold na na CATOUS010000068.1 <> na Primary Assembly 20478203 na ptg000069l unplaced-scaffold na na CATOUS010000069.1 <> na Primary Assembly 29553183 na ptg000070l unplaced-scaffold na na CATOUS010000070.1 <> na Primary Assembly 12989265 na ptg000071l unplaced-scaffold na na CATOUS010000071.1 <> na Primary Assembly 44605697 na ptg000072l unplaced-scaffold na na CATOUS010000072.1 <> na Primary Assembly 11014301 na ptg000073l unplaced-scaffold na na CATOUS010000073.1 <> na Primary Assembly 7220021 na ptg000074l unplaced-scaffold na na CATOUS010000074.1 <> na Primary Assembly 58536445 na ptg000075l unplaced-scaffold na na CATOUS010000075.1 <> na Primary Assembly 350727 na ptg000076l unplaced-scaffold na na CATOUS010000076.1 <> na Primary Assembly 5437837 na ptg000077l unplaced-scaffold na na CATOUS010000077.1 <> na Primary Assembly 1384247 na ptg000078l unplaced-scaffold na na CATOUS010000078.1 <> na Primary Assembly 5314158 na ptg000079l unplaced-scaffold na na CATOUS010000079.1 <> na Primary Assembly 3402866 na ptg000080l unplaced-scaffold na na CATOUS010000080.1 <> na Primary Assembly 1663445 na ptg000081l unplaced-scaffold na na CATOUS010000081.1 <> na Primary Assembly 2756123 na ptg000082l unplaced-scaffold na na CATOUS010000082.1 <> na Primary Assembly 11519564 na ptg000083l unplaced-scaffold na na CATOUS010000083.1 <> na Primary Assembly 12430908 na ptg000084l unplaced-scaffold na na CATOUS010000084.1 <> na Primary Assembly 6125184 na ptg000085l unplaced-scaffold na na CATOUS010000085.1 <> na Primary Assembly 4971079 na ptg000086l unplaced-scaffold na na CATOUS010000086.1 <> na Primary Assembly 14008266 na ptg000087l unplaced-scaffold na na CATOUS010000087.1 <> na Primary Assembly 4295824 na ptg000088c unplaced-scaffold na na CATOUS010000088.1 <> na Primary Assembly 1312197 na ptg000089l unplaced-scaffold na na CATOUS010000089.1 <> na Primary Assembly 2209021 na ptg000090l unplaced-scaffold na na CATOUS010000090.1 <> na Primary Assembly 1717953 na ptg000091l unplaced-scaffold na na CATOUS010000091.1 <> na Primary Assembly 8913526 na ptg000092l unplaced-scaffold na na CATOUS010000092.1 <> na Primary Assembly 1721390 na ptg000093l unplaced-scaffold na na CATOUS010000093.1 <> na Primary Assembly 3718424 na ptg000094l unplaced-scaffold na na CATOUS010000094.1 <> na Primary Assembly 6820492 na ptg000095l unplaced-scaffold na na CATOUS010000095.1 <> na Primary Assembly 5523612 na ptg000096l unplaced-scaffold na na CATOUS010000096.1 <> na Primary Assembly 6211520 na ptg000097l unplaced-scaffold na na CATOUS010000097.1 <> na Primary Assembly 7088662 na ptg000098l unplaced-scaffold na na CATOUS010000098.1 <> na Primary Assembly 5101453 na ptg000099l unplaced-scaffold na na CATOUS010000099.1 <> na Primary Assembly 3000721 na ptg000100l unplaced-scaffold na na CATOUS010000100.1 <> na Primary Assembly 4416841 na ptg000101l unplaced-scaffold na na CATOUS010000101.1 <> na Primary Assembly 2674814 na ptg000102l unplaced-scaffold na na CATOUS010000102.1 <> na Primary Assembly 6739169 na ptg000103l unplaced-scaffold na na CATOUS010000103.1 <> na Primary Assembly 14593099 na ptg000104c unplaced-scaffold na na CATOUS010000104.1 <> na Primary Assembly 776663 na ptg000105l unplaced-scaffold na na CATOUS010000105.1 <> na Primary Assembly 5313665 na ptg000106l unplaced-scaffold na na CATOUS010000106.1 <> na Primary Assembly 2324541 na ptg000107l unplaced-scaffold na na CATOUS010000107.1 <> na Primary Assembly 3869111 na ptg000108l unplaced-scaffold na na CATOUS010000108.1 <> na Primary Assembly 1494338 na ptg000109l unplaced-scaffold na na CATOUS010000109.1 <> na Primary Assembly 272377 na ptg000110l unplaced-scaffold na na CATOUS010000110.1 <> na Primary Assembly 9097319 na ptg000111l unplaced-scaffold na na CATOUS010000111.1 <> na Primary Assembly 3297752 na ptg000112l unplaced-scaffold na na CATOUS010000112.1 <> na Primary Assembly 1312735 na ptg000113l unplaced-scaffold na na CATOUS010000113.1 <> na Primary Assembly 6564393 na ptg000114l unplaced-scaffold na na CATOUS010000114.1 <> na Primary Assembly 6084485 na ptg000115l unplaced-scaffold na na CATOUS010000115.1 <> na Primary Assembly 819282 na ptg000116c unplaced-scaffold na na CATOUS010000116.1 <> na Primary Assembly 1482214 na ptg000117l unplaced-scaffold na na CATOUS010000117.1 <> na Primary Assembly 6443953 na ptg000118l unplaced-scaffold na na CATOUS010000118.1 <> na Primary Assembly 719649 na ptg000119l unplaced-scaffold na na CATOUS010000119.1 <> na Primary Assembly 1807434 na ptg000120c unplaced-scaffold na na CATOUS010000120.1 <> na Primary Assembly 572034 na ptg000121l unplaced-scaffold na na CATOUS010000121.1 <> na Primary Assembly 995430 na ptg000122l unplaced-scaffold na na CATOUS010000122.1 <> na Primary Assembly 4861743 na ptg000123l unplaced-scaffold na na CATOUS010000123.1 <> na Primary Assembly 293465 na ptg000124l unplaced-scaffold na na CATOUS010000124.1 <> na Primary Assembly 1004773 na ptg000125l unplaced-scaffold na na CATOUS010000125.1 <> na Primary Assembly 1607439 na ptg000126l unplaced-scaffold na na CATOUS010000126.1 <> na Primary Assembly 1607136 na ptg000127l unplaced-scaffold na na CATOUS010000127.1 <> na Primary Assembly 1117841 na ptg000128l unplaced-scaffold na na CATOUS010000128.1 <> na Primary Assembly 8568869 na ptg000129c unplaced-scaffold na na CATOUS010000129.1 <> na Primary Assembly 2146412 na ptg000130l unplaced-scaffold na na CATOUS010000130.1 <> na Primary Assembly 32616 na ptg000131l unplaced-scaffold na na CATOUS010000131.1 <> na Primary Assembly 3121397 na ptg000132l unplaced-scaffold na na CATOUS010000132.1 <> na Primary Assembly 4218210 na ptg000133c unplaced-scaffold na na CATOUS010000133.1 <> na Primary Assembly 2496487 na ptg000134l unplaced-scaffold na na CATOUS010000134.1 <> na Primary Assembly 2599028 na ptg000135l unplaced-scaffold na na CATOUS010000135.1 <> na Primary Assembly 1633201 na ptg000136l unplaced-scaffold na na CATOUS010000136.1 <> na Primary Assembly 1107659 na ptg000137c unplaced-scaffold na na CATOUS010000137.1 <> na Primary Assembly 437826 na ptg000138l unplaced-scaffold na na CATOUS010000138.1 <> na Primary Assembly 1586510 na ptg000139l unplaced-scaffold na na CATOUS010000139.1 <> na Primary Assembly 1574014 na ptg000140l unplaced-scaffold na na CATOUS010000140.1 <> na Primary Assembly 1923278 na ptg000141l unplaced-scaffold na na CATOUS010000141.1 <> na Primary Assembly 83513 na ptg000142l unplaced-scaffold na na CATOUS010000142.1 <> na Primary Assembly 519650 na ptg000143l unplaced-scaffold na na CATOUS010000143.1 <> na Primary Assembly 3984907 na ptg000144l unplaced-scaffold na na CATOUS010000144.1 <> na Primary Assembly 165987 na ptg000145l unplaced-scaffold na na CATOUS010000145.1 <> na Primary Assembly 579922 na ptg000146l unplaced-scaffold na na CATOUS010000146.1 <> na Primary Assembly 5723798 na ptg000147l unplaced-scaffold na na CATOUS010000147.1 <> na Primary Assembly 1475484 na ptg000148l unplaced-scaffold na na CATOUS010000148.1 <> na Primary Assembly 2361142 na ptg000149l unplaced-scaffold na na CATOUS010000149.1 <> na Primary Assembly 818931 na ptg000150l unplaced-scaffold na na CATOUS010000150.1 <> na Primary Assembly 1267692 na ptg000151c unplaced-scaffold na na CATOUS010000151.1 <> na Primary Assembly 818809 na ptg000152c unplaced-scaffold na na CATOUS010000152.1 <> na Primary Assembly 340323 na ptg000153l unplaced-scaffold na na CATOUS010000153.1 <> na Primary Assembly 1043208 na ptg000154l unplaced-scaffold na na CATOUS010000154.1 <> na Primary Assembly 1277650 na ptg000155l unplaced-scaffold na na CATOUS010000155.1 <> na Primary Assembly 721347 na ptg000156l unplaced-scaffold na na CATOUS010000156.1 <> na Primary Assembly 1190561 na ptg000157l unplaced-scaffold na na CATOUS010000157.1 <> na Primary Assembly 1599102 na ptg000158l unplaced-scaffold na na CATOUS010000158.1 <> na Primary Assembly 1007504 na ptg000159l unplaced-scaffold na na CATOUS010000159.1 <> na Primary Assembly 1130485 na ptg000160l unplaced-scaffold na na CATOUS010000160.1 <> na Primary Assembly 986459 na ptg000161l unplaced-scaffold na na CATOUS010000161.1 <> na Primary Assembly 53679 na ptg000162l unplaced-scaffold na na CATOUS010000162.1 <> na Primary Assembly 218416 na ptg000163l unplaced-scaffold na na CATOUS010000163.1 <> na Primary Assembly 1069744 na ptg000164l unplaced-scaffold na na CATOUS010000164.1 <> na Primary Assembly 108702 na ptg000165l unplaced-scaffold na na CATOUS010000165.1 <> na Primary Assembly 50315 na ptg000166l unplaced-scaffold na na CATOUS010000166.1 <> na Primary Assembly 65517 na ptg000167c unplaced-scaffold na na CATOUS010000167.1 <> na Primary Assembly 57814 na ptg000168l unplaced-scaffold na na CATOUS010000168.1 <> na Primary Assembly 103809 na ptg000169l unplaced-scaffold na na CATOUS010000169.1 <> na Primary Assembly 35837 na ptg000170l unplaced-scaffold na na CATOUS010000170.1 <> na Primary Assembly 58894 na ptg000171l unplaced-scaffold na na CATOUS010000171.1 <> na Primary Assembly 106950 na ptg000172l unplaced-scaffold na na CATOUS010000172.1 <> na Primary Assembly 73194 na ptg000173l unplaced-scaffold na na CATOUS010000173.1 <> na Primary Assembly 147179 na ptg000174c unplaced-scaffold na na CATOUS010000174.1 <> na Primary Assembly 79533 na ptg000175l unplaced-scaffold na na CATOUS010000175.1 <> na Primary Assembly 5399 na ptg000176l unplaced-scaffold na na CATOUS010000176.1 <> na Primary Assembly 178978 na ptg000177l unplaced-scaffold na na CATOUS010000177.1 <> na Primary Assembly 204771 na ptg000178l unplaced-scaffold na na CATOUS010000178.1 <> na Primary Assembly 66415 na ptg000179c unplaced-scaffold na na CATOUS010000179.1 <> na Primary Assembly 28675 na ptg000180l unplaced-scaffold na na CATOUS010000180.1 <> na Primary Assembly 40613 na ptg000181l unplaced-scaffold na na CATOUS010000181.1 <> na Primary Assembly 32766 na ptg000182l unplaced-scaffold na na CATOUS010000182.1 <> na Primary Assembly 47105 na ptg000183l unplaced-scaffold na na CATOUS010000183.1 <> na Primary Assembly 11910 na ptg000184l unplaced-scaffold na na CATOUS010000184.1 <> na Primary Assembly 26762 na ptg000185l unplaced-scaffold na na CATOUS010000185.1 <> na Primary Assembly 39576 na ptg000186l unplaced-scaffold na na CATOUS010000186.1 <> na Primary Assembly 31584 na ptg000187l unplaced-scaffold na na CATOUS010000187.1 <> na Primary Assembly 27386 na ptg000188l unplaced-scaffold na na CATOUS010000188.1 <> na Primary Assembly 32500 na ptg000189l unplaced-scaffold na na CATOUS010000189.1 <> na Primary Assembly 77900 na ptg000190l unplaced-scaffold na na CATOUS010000190.1 <> na Primary Assembly 24637 na ptg000191l unplaced-scaffold na na CATOUS010000191.1 <> na Primary Assembly 59500 na ptg000192l unplaced-scaffold na na CATOUS010000192.1 <> na Primary Assembly 38729 na ptg000193l unplaced-scaffold na na CATOUS010000193.1 <> na Primary Assembly 21422 na ptg000194l unplaced-scaffold na na CATOUS010000194.1 <> na Primary Assembly 64850 na ptg000195l unplaced-scaffold na na CATOUS010000195.1 <> na Primary Assembly 29367 na ptg000196l unplaced-scaffold na na CATOUS010000196.1 <> na Primary Assembly 26328 na ptg000197l unplaced-scaffold na na CATOUS010000197.1 <> na Primary Assembly 28075 na ptg000198l unplaced-scaffold na na CATOUS010000198.1 <> na Primary Assembly 24161 na ptg000199l unplaced-scaffold na na CATOUS010000199.1 <> na Primary Assembly 28016 na ptg000200l unplaced-scaffold na na CATOUS010000200.1 <> na Primary Assembly 73081 na ptg000201l unplaced-scaffold na na CATOUS010000201.1 <> na Primary Assembly 28437 na ptg000202l unplaced-scaffold na na CATOUS010000202.1 <> na Primary Assembly 20277 na ptg000203l unplaced-scaffold na na CATOUS010000203.1 <> na Primary Assembly 43541 na ptg000204l unplaced-scaffold na na CATOUS010000204.1 <> na Primary Assembly 29558 na ptg000205l unplaced-scaffold na na CATOUS010000205.1 <> na Primary Assembly 26115 na ptg000206l unplaced-scaffold na na CATOUS010000206.1 <> na Primary Assembly 41133 na ptg000207l unplaced-scaffold na na CATOUS010000207.1 <> na Primary Assembly 21245 na ptg000208l unplaced-scaffold na na CATOUS010000208.1 <> na Primary Assembly 27677 na ptg000209l unplaced-scaffold na na CATOUS010000209.1 <> na Primary Assembly 42523 na ptg000210l unplaced-scaffold na na CATOUS010000210.1 <> na Primary Assembly 30244 na ptg000211l unplaced-scaffold na na CATOUS010000211.1 <> na Primary Assembly 26066 na ptg000212l unplaced-scaffold na na CATOUS010000212.1 <> na Primary Assembly 29253 na