# Assembly name: fGasAcu3.hap2.1 # Organism name: Gasterosteus aculeatus (three-spined stickleback) # Taxid: 69293 # BioSample: SAMEA11296546 # BioProject: PRJEB81175 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2024-10-25 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: CAXYFJ01 # Assembly method: various # Genome coverage: 56x # Sequencing technology: PacBio,Arima2 # GenBank assembly accession: GCA_964276385.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_964276384.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name RL_1 unplaced-scaffold na na CAXYFJ010000001.1 <> na Primary Assembly 34825108 na RL_3 unplaced-scaffold na na CAXYFJ010000002.1 <> na Primary Assembly 30428091 na RL_5 unplaced-scaffold na na CAXYFJ010000003.1 <> na Primary Assembly 29538263 na RL_7 unplaced-scaffold na na CAXYFJ010000004.1 <> na Primary Assembly 24722157 na RL_9 unplaced-scaffold na na CAXYFJ010000005.1 <> na Primary Assembly 24262559 na RL_11 unplaced-scaffold na na CAXYFJ010000006.1 <> na Primary Assembly 23063768 na RL_13 unplaced-scaffold na na CAXYFJ010000007.1 <> na Primary Assembly 22510708 na RL_15 unplaced-scaffold na na CAXYFJ010000008.1 <> na Primary Assembly 22032426 na RL_18 unplaced-scaffold na na CAXYFJ010000009.1 <> na Primary Assembly 21729606 na RL_20 unplaced-scaffold na na CAXYFJ010000010.1 <> na Primary Assembly 21478594 na RL_28 unplaced-scaffold na na CAXYFJ010000011.1 <> na Primary Assembly 20692546 na RL_23 unplaced-scaffold na na CAXYFJ010000012.1 <> na Primary Assembly 20690269 na RL_30 unplaced-scaffold na na CAXYFJ010000013.1 <> na Primary Assembly 20209002 na RL_32 unplaced-scaffold na na CAXYFJ010000014.1 <> na Primary Assembly 19437922 na RL_26 unplaced-scaffold na na CAXYFJ010000015.1 <> na Primary Assembly 19409440 na RL_34 unplaced-scaffold na na CAXYFJ010000016.1 <> na Primary Assembly 19249421 na RL_35 unplaced-scaffold na na CAXYFJ010000017.1 <> na Primary Assembly 18446464 na RL_38 unplaced-scaffold na na CAXYFJ010000018.1 <> na Primary Assembly 17658207 na RL_39 unplaced-scaffold na na CAXYFJ010000019.1 <> na Primary Assembly 16853395 na RL_41 unplaced-scaffold na na CAXYFJ010000020.1 <> na Primary Assembly 16445463 na HAP2_SCAFFOLD_22 unplaced-scaffold na na CAXYFJ010000021.1 <> na Primary Assembly 1181000 na HAP2_SCAFFOLD_23 unplaced-scaffold na na CAXYFJ010000022.1 <> na Primary Assembly 938191 na HAP2_SCAFFOLD_24 unplaced-scaffold na na CAXYFJ010000023.1 <> na Primary Assembly 613145 na HAP2_SCAFFOLD_25 unplaced-scaffold na na CAXYFJ010000024.1 <> na Primary Assembly 485705 na HAP2_SCAFFOLD_26 unplaced-scaffold na na CAXYFJ010000025.1 <> na Primary Assembly 408568 na HAP2_SCAFFOLD_27 unplaced-scaffold na na CAXYFJ010000026.1 <> na Primary Assembly 407000 na HAP2_SCAFFOLD_28 unplaced-scaffold na na CAXYFJ010000027.1 <> na Primary Assembly 396000 na HAP2_SCAFFOLD_29 unplaced-scaffold na na CAXYFJ010000028.1 <> na Primary Assembly 339000 na HAP2_SCAFFOLD_30 unplaced-scaffold na na CAXYFJ010000029.1 <> na Primary Assembly 332776 na HAP2_SCAFFOLD_31 unplaced-scaffold na na CAXYFJ010000030.1 <> na Primary Assembly 316000 na HAP2_SCAFFOLD_32 unplaced-scaffold na na CAXYFJ010000031.1 <> na Primary Assembly 301913 na HAP2_SCAFFOLD_33 unplaced-scaffold na na CAXYFJ010000032.1 <> na Primary Assembly 223081 na HAP2_SCAFFOLD_35 unplaced-scaffold na na CAXYFJ010000033.1 <> na Primary Assembly 211858 na HAP2_SCAFFOLD_36 unplaced-scaffold na na CAXYFJ010000034.1 <> na Primary Assembly 186051 na HAP2_SCAFFOLD_37 unplaced-scaffold na na CAXYFJ010000035.1 <> na Primary Assembly 185074 na HAP2_SCAFFOLD_38 unplaced-scaffold na na CAXYFJ010000036.1 <> na Primary Assembly 179267 na HAP2_SCAFFOLD_39 unplaced-scaffold na na CAXYFJ010000037.1 <> na Primary Assembly 172538 na HAP2_SCAFFOLD_40 unplaced-scaffold na na CAXYFJ010000038.1 <> na Primary Assembly 168037 na HAP2_SCAFFOLD_41 unplaced-scaffold na na CAXYFJ010000039.1 <> na Primary Assembly 149688 na HAP2_SCAFFOLD_42 unplaced-scaffold na na CAXYFJ010000040.1 <> na Primary Assembly 147192 na HAP2_SCAFFOLD_43 unplaced-scaffold na na CAXYFJ010000041.1 <> na Primary Assembly 140011 na HAP2_SCAFFOLD_44 unplaced-scaffold na na CAXYFJ010000042.1 <> na Primary Assembly 136933 na HAP2_SCAFFOLD_45 unplaced-scaffold na na CAXYFJ010000043.1 <> na Primary Assembly 133000 na HAP2_SCAFFOLD_46 unplaced-scaffold na na CAXYFJ010000044.1 <> na Primary Assembly 117458 na HAP2_SCAFFOLD_47 unplaced-scaffold na na CAXYFJ010000045.1 <> na Primary Assembly 113278 na HAP2_SCAFFOLD_48 unplaced-scaffold na na CAXYFJ010000046.1 <> na Primary Assembly 106335 na HAP2_SCAFFOLD_49 unplaced-scaffold na na CAXYFJ010000047.1 <> na Primary Assembly 105479 na HAP2_SCAFFOLD_50 unplaced-scaffold na na CAXYFJ010000048.1 <> na Primary Assembly 95939 na HAP2_SCAFFOLD_51 unplaced-scaffold na na CAXYFJ010000049.1 <> na Primary Assembly 94586 na HAP2_SCAFFOLD_52 unplaced-scaffold na na CAXYFJ010000050.1 <> na Primary Assembly 93499 na HAP2_SCAFFOLD_53 unplaced-scaffold na na CAXYFJ010000051.1 <> na Primary Assembly 92220 na HAP2_SCAFFOLD_54 unplaced-scaffold na na CAXYFJ010000052.1 <> na Primary Assembly 92000 na HAP2_SCAFFOLD_55 unplaced-scaffold na na CAXYFJ010000053.1 <> na Primary Assembly 91862 na HAP2_SCAFFOLD_56 unplaced-scaffold na na CAXYFJ010000054.1 <> na Primary Assembly 90000 na HAP2_SCAFFOLD_57 unplaced-scaffold na na CAXYFJ010000055.1 <> na Primary Assembly 89351 na HAP2_SCAFFOLD_58 unplaced-scaffold na na CAXYFJ010000056.1 <> na Primary Assembly 82771 na HAP2_SCAFFOLD_59 unplaced-scaffold na na CAXYFJ010000057.1 <> na Primary Assembly 82000 na HAP2_SCAFFOLD_60 unplaced-scaffold na na CAXYFJ010000058.1 <> na Primary Assembly 80449 na HAP2_SCAFFOLD_61 unplaced-scaffold na na CAXYFJ010000059.1 <> na Primary Assembly 79356 na HAP2_SCAFFOLD_62 unplaced-scaffold na na CAXYFJ010000060.1 <> na Primary Assembly 77621 na HAP2_SCAFFOLD_63 unplaced-scaffold na na CAXYFJ010000061.1 <> na Primary Assembly 77407 na HAP2_SCAFFOLD_64 unplaced-scaffold na na CAXYFJ010000062.1 <> na Primary Assembly 76057 na HAP2_SCAFFOLD_65 unplaced-scaffold na na CAXYFJ010000063.1 <> na Primary Assembly 76041 na HAP2_SCAFFOLD_66 unplaced-scaffold na na CAXYFJ010000064.1 <> na Primary Assembly 73335 na HAP2_SCAFFOLD_67 unplaced-scaffold na na CAXYFJ010000065.1 <> na Primary Assembly 70995 na HAP2_SCAFFOLD_68 unplaced-scaffold na na CAXYFJ010000066.1 <> na Primary Assembly 69378 na HAP2_SCAFFOLD_69 unplaced-scaffold na na CAXYFJ010000067.1 <> na Primary Assembly 66823 na HAP2_SCAFFOLD_70 unplaced-scaffold na na CAXYFJ010000068.1 <> na Primary Assembly 66344 na HAP2_SCAFFOLD_71 unplaced-scaffold na na CAXYFJ010000069.1 <> na Primary Assembly 65249 na HAP2_SCAFFOLD_72 unplaced-scaffold na na CAXYFJ010000070.1 <> na Primary Assembly 64245 na HAP2_SCAFFOLD_73 unplaced-scaffold na na CAXYFJ010000071.1 <> na Primary Assembly 64000 na HAP2_SCAFFOLD_74 unplaced-scaffold na na CAXYFJ010000072.1 <> na Primary Assembly 62756 na HAP2_SCAFFOLD_75 unplaced-scaffold na na CAXYFJ010000073.1 <> na Primary Assembly 62173 na HAP2_SCAFFOLD_76 unplaced-scaffold na na CAXYFJ010000074.1 <> na Primary Assembly 62031 na HAP2_SCAFFOLD_77 unplaced-scaffold na na CAXYFJ010000075.1 <> na Primary Assembly 61666 na HAP2_SCAFFOLD_78 unplaced-scaffold na na CAXYFJ010000076.1 <> na Primary Assembly 61511 na HAP2_SCAFFOLD_79 unplaced-scaffold na na CAXYFJ010000077.1 <> na Primary Assembly 59361 na HAP2_SCAFFOLD_80 unplaced-scaffold na na CAXYFJ010000078.1 <> na Primary Assembly 56776 na HAP2_SCAFFOLD_81 unplaced-scaffold na na CAXYFJ010000079.1 <> na Primary Assembly 55554 na HAP2_SCAFFOLD_82 unplaced-scaffold na na CAXYFJ010000080.1 <> na Primary Assembly 55445 na HAP2_SCAFFOLD_83 unplaced-scaffold na na CAXYFJ010000081.1 <> na Primary Assembly 53042 na HAP2_SCAFFOLD_84 unplaced-scaffold na na CAXYFJ010000082.1 <> na Primary Assembly 51731 na HAP2_SCAFFOLD_85 unplaced-scaffold na na CAXYFJ010000083.1 <> na Primary Assembly 51581 na HAP2_SCAFFOLD_86 unplaced-scaffold na na CAXYFJ010000084.1 <> na Primary Assembly 51376 na HAP2_SCAFFOLD_87 unplaced-scaffold na na CAXYFJ010000085.1 <> na Primary Assembly 51105 na HAP2_SCAFFOLD_88 unplaced-scaffold na na CAXYFJ010000086.1 <> na Primary Assembly 50744 na HAP2_SCAFFOLD_89 unplaced-scaffold na na CAXYFJ010000087.1 <> na Primary Assembly 50648 na HAP2_SCAFFOLD_90 unplaced-scaffold na na CAXYFJ010000088.1 <> na Primary Assembly 50151 na HAP2_SCAFFOLD_91 unplaced-scaffold na na CAXYFJ010000089.1 <> na Primary Assembly 49824 na HAP2_SCAFFOLD_92 unplaced-scaffold na na CAXYFJ010000090.1 <> na Primary Assembly 49156 na HAP2_SCAFFOLD_93 unplaced-scaffold na na CAXYFJ010000091.1 <> na Primary Assembly 49088 na HAP2_SCAFFOLD_94 unplaced-scaffold na na CAXYFJ010000092.1 <> na Primary Assembly 47409 na HAP2_SCAFFOLD_95 unplaced-scaffold na na CAXYFJ010000093.1 <> na Primary Assembly 47168 na HAP2_SCAFFOLD_96 unplaced-scaffold na na CAXYFJ010000094.1 <> na Primary Assembly 46919 na HAP2_SCAFFOLD_97 unplaced-scaffold na na CAXYFJ010000095.1 <> na Primary Assembly 46451 na HAP2_SCAFFOLD_98 unplaced-scaffold na na CAXYFJ010000096.1 <> na Primary Assembly 46286 na HAP2_SCAFFOLD_99 unplaced-scaffold na na CAXYFJ010000097.1 <> na Primary Assembly 46208 na HAP2_SCAFFOLD_100 unplaced-scaffold na na CAXYFJ010000098.1 <> na Primary Assembly 45745 na HAP2_SCAFFOLD_101 unplaced-scaffold na na CAXYFJ010000099.1 <> na Primary Assembly 45546 na HAP2_SCAFFOLD_102 unplaced-scaffold na na CAXYFJ010000100.1 <> na Primary Assembly 45366 na HAP2_SCAFFOLD_103 unplaced-scaffold na na CAXYFJ010000101.1 <> na Primary Assembly 45350 na HAP2_SCAFFOLD_104 unplaced-scaffold na na CAXYFJ010000102.1 <> na Primary Assembly 44033 na HAP2_SCAFFOLD_105 unplaced-scaffold na na CAXYFJ010000103.1 <> na Primary Assembly 43349 na HAP2_SCAFFOLD_106 unplaced-scaffold na na CAXYFJ010000104.1 <> na Primary Assembly 42681 na HAP2_SCAFFOLD_107 unplaced-scaffold na na CAXYFJ010000105.1 <> na Primary Assembly 42525 na HAP2_SCAFFOLD_108 unplaced-scaffold na na CAXYFJ010000106.1 <> na Primary Assembly 42027 na HAP2_SCAFFOLD_109 unplaced-scaffold na na CAXYFJ010000107.1 <> na Primary Assembly 41769 na HAP2_SCAFFOLD_110 unplaced-scaffold na na CAXYFJ010000108.1 <> na Primary Assembly 40613 na HAP2_SCAFFOLD_111 unplaced-scaffold na na CAXYFJ010000109.1 <> na Primary Assembly 40512 na HAP2_SCAFFOLD_112 unplaced-scaffold na na CAXYFJ010000110.1 <> na Primary Assembly 40410 na HAP2_SCAFFOLD_113 unplaced-scaffold na na CAXYFJ010000111.1 <> na Primary Assembly 39838 na HAP2_SCAFFOLD_114 unplaced-scaffold na na CAXYFJ010000112.1 <> na Primary Assembly 39833 na HAP2_SCAFFOLD_115 unplaced-scaffold na na CAXYFJ010000113.1 <> na Primary Assembly 39367 na HAP2_SCAFFOLD_116 unplaced-scaffold na na CAXYFJ010000114.1 <> na Primary Assembly 39203 na HAP2_SCAFFOLD_117 unplaced-scaffold na na CAXYFJ010000115.1 <> na Primary Assembly 36788 na HAP2_SCAFFOLD_118 unplaced-scaffold na na CAXYFJ010000116.1 <> na Primary Assembly 36633 na HAP2_SCAFFOLD_119 unplaced-scaffold na na CAXYFJ010000117.1 <> na Primary Assembly 35565 na HAP2_SCAFFOLD_120 unplaced-scaffold na na CAXYFJ010000118.1 <> na Primary Assembly 35408 na HAP2_SCAFFOLD_121 unplaced-scaffold na na CAXYFJ010000119.1 <> na Primary Assembly 34959 na HAP2_SCAFFOLD_122 unplaced-scaffold na na CAXYFJ010000120.1 <> na Primary Assembly 34344 na HAP2_SCAFFOLD_123 unplaced-scaffold na na CAXYFJ010000121.1 <> na Primary Assembly 33840 na HAP2_SCAFFOLD_124 unplaced-scaffold na na CAXYFJ010000122.1 <> na Primary Assembly 33416 na HAP2_SCAFFOLD_125 unplaced-scaffold na na CAXYFJ010000123.1 <> na Primary Assembly 32722 na HAP2_SCAFFOLD_126 unplaced-scaffold na na CAXYFJ010000124.1 <> na Primary Assembly 32519 na HAP2_SCAFFOLD_127 unplaced-scaffold na na CAXYFJ010000125.1 <> na Primary Assembly 32364 na HAP2_SCAFFOLD_128 unplaced-scaffold na na CAXYFJ010000126.1 <> na Primary Assembly 31757 na HAP2_SCAFFOLD_129 unplaced-scaffold na na CAXYFJ010000127.1 <> na Primary Assembly 31271 na HAP2_SCAFFOLD_130 unplaced-scaffold na na CAXYFJ010000128.1 <> na Primary Assembly 31178 na HAP2_SCAFFOLD_131 unplaced-scaffold na na CAXYFJ010000129.1 <> na Primary Assembly 31025 na HAP2_SCAFFOLD_132 unplaced-scaffold na na CAXYFJ010000130.1 <> na Primary Assembly 30990 na HAP2_SCAFFOLD_133 unplaced-scaffold na na CAXYFJ010000131.1 <> na Primary Assembly 30431 na HAP2_SCAFFOLD_134 unplaced-scaffold na na CAXYFJ010000132.1 <> na Primary Assembly 30425 na HAP2_SCAFFOLD_135 unplaced-scaffold na na CAXYFJ010000133.1 <> na Primary Assembly 29976 na HAP2_SCAFFOLD_136 unplaced-scaffold na na CAXYFJ010000134.1 <> na Primary Assembly 29361 na HAP2_SCAFFOLD_137 unplaced-scaffold na na CAXYFJ010000135.1 <> na Primary Assembly 29235 na HAP2_SCAFFOLD_138 unplaced-scaffold na na CAXYFJ010000136.1 <> na Primary Assembly 29125 na HAP2_SCAFFOLD_139 unplaced-scaffold na na CAXYFJ010000137.1 <> na Primary Assembly 28482 na HAP2_SCAFFOLD_140 unplaced-scaffold na na CAXYFJ010000138.1 <> na Primary Assembly 28463 na HAP2_SCAFFOLD_141 unplaced-scaffold na na CAXYFJ010000139.1 <> na Primary Assembly 28211 na HAP2_SCAFFOLD_142 unplaced-scaffold na na CAXYFJ010000140.1 <> na Primary Assembly 28132 na HAP2_SCAFFOLD_143 unplaced-scaffold na na CAXYFJ010000141.1 <> na Primary Assembly 27482 na HAP2_SCAFFOLD_144 unplaced-scaffold na na CAXYFJ010000142.1 <> na Primary Assembly 27331 na HAP2_SCAFFOLD_145 unplaced-scaffold na na CAXYFJ010000143.1 <> na Primary Assembly 27060 na HAP2_SCAFFOLD_146 unplaced-scaffold na na CAXYFJ010000144.1 <> na Primary Assembly 27021 na HAP2_SCAFFOLD_147 unplaced-scaffold na na CAXYFJ010000145.1 <> na Primary Assembly 26566 na HAP2_SCAFFOLD_148 unplaced-scaffold na na CAXYFJ010000146.1 <> na Primary Assembly 26497 na HAP2_SCAFFOLD_149 unplaced-scaffold na na CAXYFJ010000147.1 <> na Primary Assembly 26383 na HAP2_SCAFFOLD_150 unplaced-scaffold na na CAXYFJ010000148.1 <> na Primary Assembly 26151 na HAP2_SCAFFOLD_151 unplaced-scaffold na na CAXYFJ010000149.1 <> na Primary Assembly 25781 na HAP2_SCAFFOLD_152 unplaced-scaffold na na CAXYFJ010000150.1 <> na Primary Assembly 25757 na HAP2_SCAFFOLD_153 unplaced-scaffold na na CAXYFJ010000151.1 <> na Primary Assembly 25493 na HAP2_SCAFFOLD_154 unplaced-scaffold na na CAXYFJ010000152.1 <> na Primary Assembly 25485 na HAP2_SCAFFOLD_155 unplaced-scaffold na na CAXYFJ010000153.1 <> na Primary Assembly 25004 na HAP2_SCAFFOLD_156 unplaced-scaffold na na CAXYFJ010000154.1 <> na Primary Assembly 25000 na HAP2_SCAFFOLD_157 unplaced-scaffold na na CAXYFJ010000155.1 <> na Primary Assembly 24833 na HAP2_SCAFFOLD_158 unplaced-scaffold na na CAXYFJ010000156.1 <> na Primary Assembly 23941 na HAP2_SCAFFOLD_159 unplaced-scaffold na na CAXYFJ010000157.1 <> na Primary Assembly 23337 na HAP2_SCAFFOLD_160 unplaced-scaffold na na CAXYFJ010000158.1 <> na Primary Assembly 23316 na HAP2_SCAFFOLD_161 unplaced-scaffold na na CAXYFJ010000159.1 <> na Primary Assembly 22125 na HAP2_SCAFFOLD_162 unplaced-scaffold na na CAXYFJ010000160.1 <> na Primary Assembly 21639 na HAP2_SCAFFOLD_163 unplaced-scaffold na na CAXYFJ010000161.1 <> na Primary Assembly 19709 na HAP2_SCAFFOLD_164 unplaced-scaffold na na CAXYFJ010000162.1 <> na Primary Assembly 18699 na HAP2_SCAFFOLD_165 unplaced-scaffold na na CAXYFJ010000163.1 <> na Primary Assembly 18499 na HAP2_SCAFFOLD_166 unplaced-scaffold na na CAXYFJ010000164.1 <> na Primary Assembly 16601 na HAP2_SCAFFOLD_168 unplaced-scaffold na na CAXYFJ010000165.1 <> na Primary Assembly 14142 na HAP2_SCAFFOLD_169 unplaced-scaffold na na CAXYFJ010000166.1 <> na Primary Assembly 13812 na HAP2_SCAFFOLD_170 unplaced-scaffold na na CAXYFJ010000167.1 <> na Primary Assembly 12503 na HAP2_SCAFFOLD_171 unplaced-scaffold na na CAXYFJ010000168.1 <> na Primary Assembly 11762 na HAP2_SCAFFOLD_172 unplaced-scaffold na na CAXYFJ010000169.1 <> na Primary Assembly 7751 na HAP2_SCAFFOLD_173 unplaced-scaffold na na CAXYFJ010000170.1 <> na Primary Assembly 1000 na