# Assembly name: fAthHes1.1 # Organism name: Atherina hepsetus (Mediterranean sand smelt) # Taxid: 238709 # BioSample: SAMEA120297168 # BioProject: PRJEB98022 # Submitter: Genoscope # Date: 2025-11-10 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CDROCH01 # Assembly method: Hifiasm,Purge_dups,Yahs # Genome coverage: 52x # Sequencing technology: PacBio,Arima # RefSeq category: Reference Genome # GenBank assembly accession: GCA_977020125.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_977020124.1 Primary Assembly ## GCA_977020126.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name fAthHes1_1 assembled-molecule 1 Chromosome OZ364019.1 <> na Primary Assembly 55039500 na fAthHes1_2 assembled-molecule 2 Chromosome OZ364020.1 <> na Primary Assembly 54860327 na fAthHes1_3 assembled-molecule 3 Chromosome OZ364021.1 <> na Primary Assembly 49774135 na fAthHes1_4 assembled-molecule 4 Chromosome OZ364022.1 <> na Primary Assembly 49272293 na fAthHes1_5 assembled-molecule 5 Chromosome OZ364023.1 <> na Primary Assembly 49103965 na fAthHes1_6 assembled-molecule 6 Chromosome OZ364024.1 <> na Primary Assembly 47678522 na fAthHes1_7 assembled-molecule 7 Chromosome OZ364025.1 <> na Primary Assembly 47060557 na fAthHes1_8 assembled-molecule 8 Chromosome OZ364026.1 <> na Primary Assembly 46092124 na fAthHes1_9 assembled-molecule 9 Chromosome OZ364027.1 <> na Primary Assembly 45820953 na fAthHes1_10 assembled-molecule 10 Chromosome OZ364028.1 <> na Primary Assembly 44671433 na fAthHes1_11 assembled-molecule 11 Chromosome OZ364029.1 <> na Primary Assembly 42607871 na fAthHes1_12 assembled-molecule 12 Chromosome OZ364030.1 <> na Primary Assembly 42440272 na fAthHes1_13 assembled-molecule 13 Chromosome OZ364031.1 <> na Primary Assembly 41727573 na fAthHes1_14 assembled-molecule 14 Chromosome OZ364032.1 <> na Primary Assembly 41091747 na fAthHes1_15 assembled-molecule 15 Chromosome OZ364033.1 <> na Primary Assembly 40511677 na fAthHes1_16 assembled-molecule 16 Chromosome OZ364034.1 <> na Primary Assembly 39866321 na fAthHes1_17 assembled-molecule 17 Chromosome OZ364035.1 <> na Primary Assembly 37649906 na fAthHes1_18 assembled-molecule 18 Chromosome OZ364036.1 <> na Primary Assembly 37674179 na fAthHes1_19 assembled-molecule 19 Chromosome OZ364037.1 <> na Primary Assembly 37159764 na fAthHes1_20 assembled-molecule 20 Chromosome OZ364038.1 <> na Primary Assembly 36756014 na fAthHes1_21 assembled-molecule 21 Chromosome OZ364039.1 <> na Primary Assembly 36408087 na fAthHes1_22 assembled-molecule 22 Chromosome OZ364040.1 <> na Primary Assembly 36162697 na fAthHes1_23 assembled-molecule 23 Chromosome OZ364041.1 <> na Primary Assembly 32104679 na fAthHes1_24 assembled-molecule 24 Chromosome OZ364042.1 <> na Primary Assembly 25866052 na fAthHes1_17_unloc_1 unlocalized-scaffold 17 Chromosome CDROCH010000001.1 <> na Primary Assembly 406000 na scaffold_24 unplaced-scaffold na na CDROCH010000002.1 <> na Primary Assembly 2372000 na scaffold_26 unplaced-scaffold na na CDROCH010000003.1 <> na Primary Assembly 1561000 na scaffold_28 unplaced-scaffold na na CDROCH010000004.1 <> na Primary Assembly 960000 na scaffold_30 unplaced-scaffold na na CDROCH010000005.1 <> na Primary Assembly 620046 na scaffold_31 unplaced-scaffold na na CDROCH010000006.1 <> na Primary Assembly 543000 na scaffold_32 unplaced-scaffold na na CDROCH010000007.1 <> na Primary Assembly 530156 na scaffold_34 unplaced-scaffold na na CDROCH010000008.1 <> na Primary Assembly 503000 na scaffold_36 unplaced-scaffold na na CDROCH010000009.1 <> na Primary Assembly 368044 na scaffold_38 unplaced-scaffold na na CDROCH010000010.1 <> na Primary Assembly 346837 na scaffold_39 unplaced-scaffold na na CDROCH010000011.1 <> na Primary Assembly 317000 na scaffold_41 unplaced-scaffold na na CDROCH010000012.1 <> na Primary Assembly 280939 na scaffold_43 unplaced-scaffold na na CDROCH010000013.1 <> na Primary Assembly 230000 na scaffold_44 unplaced-scaffold na na CDROCH010000014.1 <> na Primary Assembly 224664 na scaffold_45 unplaced-scaffold na na CDROCH010000015.1 <> na Primary Assembly 223000 na scaffold_46 unplaced-scaffold na na CDROCH010000016.1 <> na Primary Assembly 210716 na scaffold_47 unplaced-scaffold na na CDROCH010000017.1 <> na Primary Assembly 209000 na scaffold_48 unplaced-scaffold na na CDROCH010000018.1 <> na Primary Assembly 185000 na scaffold_49 unplaced-scaffold na na CDROCH010000019.1 <> na Primary Assembly 180000 na scaffold_50 unplaced-scaffold na na CDROCH010000020.1 <> na Primary Assembly 169000 na scaffold_51 unplaced-scaffold na na CDROCH010000021.1 <> na Primary Assembly 168221 na scaffold_52 unplaced-scaffold na na CDROCH010000022.1 <> na Primary Assembly 165000 na scaffold_55 unplaced-scaffold na na CDROCH010000023.1 <> na Primary Assembly 150000 na scaffold_56 unplaced-scaffold na na CDROCH010000024.1 <> na Primary Assembly 150000 na scaffold_57 unplaced-scaffold na na CDROCH010000025.1 <> na Primary Assembly 146503 na scaffold_59 unplaced-scaffold na na CDROCH010000026.1 <> na Primary Assembly 139874 na scaffold_60 unplaced-scaffold na na CDROCH010000027.1 <> na Primary Assembly 132000 na scaffold_61 unplaced-scaffold na na CDROCH010000028.1 <> na Primary Assembly 131393 na scaffold_62 unplaced-scaffold na na CDROCH010000029.1 <> na Primary Assembly 130588 na scaffold_63 unplaced-scaffold na na CDROCH010000030.1 <> na Primary Assembly 130328 na scaffold_64 unplaced-scaffold na na CDROCH010000031.1 <> na Primary Assembly 128000 na scaffold_65 unplaced-scaffold na na CDROCH010000032.1 <> na Primary Assembly 126000 na scaffold_66 unplaced-scaffold na na CDROCH010000033.1 <> na Primary Assembly 125124 na scaffold_67 unplaced-scaffold na na CDROCH010000034.1 <> na Primary Assembly 122709 na scaffold_68 unplaced-scaffold na na CDROCH010000035.1 <> na Primary Assembly 122216 na scaffold_69 unplaced-scaffold na na CDROCH010000036.1 <> na Primary Assembly 116000 na scaffold_70 unplaced-scaffold na na CDROCH010000037.1 <> na Primary Assembly 113000 na scaffold_71 unplaced-scaffold na na CDROCH010000038.1 <> na Primary Assembly 113000 na scaffold_72 unplaced-scaffold na na CDROCH010000039.1 <> na Primary Assembly 100254 na scaffold_73 unplaced-scaffold na na CDROCH010000040.1 <> na Primary Assembly 91000 na scaffold_75 unplaced-scaffold na na CDROCH010000041.1 <> na Primary Assembly 89000 na scaffold_76 unplaced-scaffold na na CDROCH010000042.1 <> na Primary Assembly 88891 na scaffold_77 unplaced-scaffold na na CDROCH010000043.1 <> na Primary Assembly 88000 na scaffold_78 unplaced-scaffold na na CDROCH010000044.1 <> na Primary Assembly 87582 na scaffold_79 unplaced-scaffold na na CDROCH010000045.1 <> na Primary Assembly 83407 na scaffold_80 unplaced-scaffold na na CDROCH010000046.1 <> na Primary Assembly 83000 na scaffold_82 unplaced-scaffold na na CDROCH010000047.1 <> na Primary Assembly 77843 na scaffold_83 unplaced-scaffold na na CDROCH010000048.1 <> na Primary Assembly 76445 na scaffold_84 unplaced-scaffold na na CDROCH010000049.1 <> na Primary Assembly 75000 na scaffold_85 unplaced-scaffold na na CDROCH010000050.1 <> na Primary Assembly 69627 na scaffold_86 unplaced-scaffold na na CDROCH010000051.1 <> na Primary Assembly 68912 na scaffold_87 unplaced-scaffold na na CDROCH010000052.1 <> na Primary Assembly 68772 na scaffold_88 unplaced-scaffold na na CDROCH010000053.1 <> na Primary Assembly 68000 na scaffold_89 unplaced-scaffold na na CDROCH010000054.1 <> na Primary Assembly 66518 na scaffold_90 unplaced-scaffold na na CDROCH010000055.1 <> na Primary Assembly 66000 na scaffold_91 unplaced-scaffold na na CDROCH010000056.1 <> na Primary Assembly 64000 na scaffold_92 unplaced-scaffold na na CDROCH010000057.1 <> na Primary Assembly 63000 na scaffold_93 unplaced-scaffold na na CDROCH010000058.1 <> na Primary Assembly 63000 na scaffold_94 unplaced-scaffold na na CDROCH010000059.1 <> na Primary Assembly 62364 na scaffold_95 unplaced-scaffold na na CDROCH010000060.1 <> na Primary Assembly 62000 na scaffold_96 unplaced-scaffold na na CDROCH010000061.1 <> na Primary Assembly 61646 na scaffold_97 unplaced-scaffold na na CDROCH010000062.1 <> na Primary Assembly 59822 na scaffold_98 unplaced-scaffold na na CDROCH010000063.1 <> na Primary Assembly 59226 na scaffold_99 unplaced-scaffold na na CDROCH010000064.1 <> na Primary Assembly 56925 na scaffold_100 unplaced-scaffold na na CDROCH010000065.1 <> na Primary Assembly 55666 na scaffold_101 unplaced-scaffold na na CDROCH010000066.1 <> na Primary Assembly 55000 na scaffold_102 unplaced-scaffold na na CDROCH010000067.1 <> na Primary Assembly 50205 na scaffold_103 unplaced-scaffold na na CDROCH010000068.1 <> na Primary Assembly 49717 na scaffold_104 unplaced-scaffold na na CDROCH010000069.1 <> na Primary Assembly 46386 na scaffold_105 unplaced-scaffold na na CDROCH010000070.1 <> na Primary Assembly 44447 na scaffold_106 unplaced-scaffold na na CDROCH010000071.1 <> na Primary Assembly 43541 na scaffold_107 unplaced-scaffold na na CDROCH010000072.1 <> na Primary Assembly 41748 na scaffold_108 unplaced-scaffold na na CDROCH010000073.1 <> na Primary Assembly 39649 na scaffold_109 unplaced-scaffold na na CDROCH010000074.1 <> na Primary Assembly 38000 na scaffold_110 unplaced-scaffold na na CDROCH010000075.1 <> na Primary Assembly 37857 na scaffold_111 unplaced-scaffold na na CDROCH010000076.1 <> na Primary Assembly 37681 na scaffold_112 unplaced-scaffold na na CDROCH010000077.1 <> na Primary Assembly 37000 na scaffold_113 unplaced-scaffold na na CDROCH010000078.1 <> na Primary Assembly 36305 na scaffold_114 unplaced-scaffold na na CDROCH010000079.1 <> na Primary Assembly 36000 na scaffold_115 unplaced-scaffold na na CDROCH010000080.1 <> na Primary Assembly 33320 na scaffold_117 unplaced-scaffold na na CDROCH010000081.1 <> na Primary Assembly 32701 na scaffold_118 unplaced-scaffold na na CDROCH010000082.1 <> na Primary Assembly 32000 na scaffold_119 unplaced-scaffold na na CDROCH010000083.1 <> na Primary Assembly 31536 na scaffold_120 unplaced-scaffold na na CDROCH010000084.1 <> na Primary Assembly 29373 na scaffold_121 unplaced-scaffold na na CDROCH010000085.1 <> na Primary Assembly 28831 na scaffold_122 unplaced-scaffold na na CDROCH010000086.1 <> na Primary Assembly 28000 na scaffold_123 unplaced-scaffold na na CDROCH010000087.1 <> na Primary Assembly 28000 na scaffold_124 unplaced-scaffold na na CDROCH010000088.1 <> na Primary Assembly 27407 na scaffold_125 unplaced-scaffold na na CDROCH010000089.1 <> na Primary Assembly 25782 na scaffold_126 unplaced-scaffold na na CDROCH010000090.1 <> na Primary Assembly 25234 na scaffold_127 unplaced-scaffold na na CDROCH010000091.1 <> na Primary Assembly 22973 na scaffold_128 unplaced-scaffold na na CDROCH010000092.1 <> na Primary Assembly 22340 na scaffold_129 unplaced-scaffold na na CDROCH010000093.1 <> na Primary Assembly 22000 na scaffold_130 unplaced-scaffold na na CDROCH010000094.1 <> na Primary Assembly 21678 na scaffold_131 unplaced-scaffold na na CDROCH010000095.1 <> na Primary Assembly 20000 na scaffold_132 unplaced-scaffold na na CDROCH010000096.1 <> na Primary Assembly 19142 na scaffold_133 unplaced-scaffold na na CDROCH010000097.1 <> na Primary Assembly 19000 na scaffold_134 unplaced-scaffold na na CDROCH010000098.1 <> na Primary Assembly 18967 na scaffold_135 unplaced-scaffold na na CDROCH010000099.1 <> na Primary Assembly 18306 na scaffold_136 unplaced-scaffold na na CDROCH010000100.1 <> na Primary Assembly 18109 na scaffold_137 unplaced-scaffold na na CDROCH010000101.1 <> na Primary Assembly 17332 na scaffold_138 unplaced-scaffold na na CDROCH010000102.1 <> na Primary Assembly 17000 na scaffold_139 unplaced-scaffold na na CDROCH010000103.1 <> na Primary Assembly 16490 na scaffold_140 unplaced-scaffold na na CDROCH010000104.1 <> na Primary Assembly 15000 na scaffold_141 unplaced-scaffold na na CDROCH010000105.1 <> na Primary Assembly 14000 na scaffold_142 unplaced-scaffold na na CDROCH010000106.1 <> na Primary Assembly 14000 na scaffold_143 unplaced-scaffold na na CDROCH010000107.1 <> na Primary Assembly 12598 na scaffold_144 unplaced-scaffold na na CDROCH010000108.1 <> na Primary Assembly 11000 na mitochondrion_1 assembled-molecule MIT Mitochondrion OZ364043.1 <> na non-nuclear 16524 na