# Assembly name: SOAPdenovo for version v2.01 of the Marinomonas sp. D104 genome # Organism name: Marinomonas profundimaris (g-proteobacteria) # Infraspecific name: strain=D104 # Taxid: 1208321 # BioSample: SAMN02471158 # BioProject: PRJNA170395 # Submitter: The Third Institute of State Oceanic Administration (SOA) # Date: 2013-12-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AYOZ01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: yes # Genome coverage: 353x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000508165.1 # RefSeq assembly accession: GCF_000508165.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000508175.1 GCF_000508175.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig1 unplaced-scaffold na na AYOZ01000001.1 = NZ_AYOZ01000001.1 Primary Assembly 469041 na contig10 unplaced-scaffold na na AYOZ01000002.1 = NZ_AYOZ01000002.1 Primary Assembly 139013 na contig11 unplaced-scaffold na na AYOZ01000003.1 = NZ_AYOZ01000003.1 Primary Assembly 135871 na contig12 unplaced-scaffold na na AYOZ01000004.1 = NZ_AYOZ01000004.1 Primary Assembly 118072 na contig13 unplaced-scaffold na na AYOZ01000005.1 = NZ_AYOZ01000005.1 Primary Assembly 114532 na contig14 unplaced-scaffold na na AYOZ01000006.1 = NZ_AYOZ01000006.1 Primary Assembly 111075 na contig15 unplaced-scaffold na na AYOZ01000007.1 = NZ_AYOZ01000007.1 Primary Assembly 103558 na contig16 unplaced-scaffold na na AYOZ01000008.1 = NZ_AYOZ01000008.1 Primary Assembly 92985 na contig17 unplaced-scaffold na na AYOZ01000009.1 = NZ_AYOZ01000009.1 Primary Assembly 79270 na contig18 unplaced-scaffold na na AYOZ01000010.1 = NZ_AYOZ01000010.1 Primary Assembly 77733 na contig19 unplaced-scaffold na na AYOZ01000011.1 = NZ_AYOZ01000011.1 Primary Assembly 68247 na contig2 unplaced-scaffold na na AYOZ01000012.1 = NZ_AYOZ01000012.1 Primary Assembly 324472 na contig20 unplaced-scaffold na na AYOZ01000013.1 = NZ_AYOZ01000013.1 Primary Assembly 53328 na contig21 unplaced-scaffold na na AYOZ01000014.1 = NZ_AYOZ01000014.1 Primary Assembly 46646 na contig22 unplaced-scaffold na na AYOZ01000015.1 = NZ_AYOZ01000015.1 Primary Assembly 42276 na contig23 unplaced-scaffold na na AYOZ01000016.1 = NZ_AYOZ01000016.1 Primary Assembly 34791 na contig24 unplaced-scaffold na na AYOZ01000017.1 = NZ_AYOZ01000017.1 Primary Assembly 31731 na contig25 unplaced-scaffold na na AYOZ01000018.1 = NZ_AYOZ01000018.1 Primary Assembly 28742 na contig26 unplaced-scaffold na na AYOZ01000019.1 = NZ_AYOZ01000019.1 Primary Assembly 21929 na contig27 unplaced-scaffold na na AYOZ01000020.1 = NZ_AYOZ01000020.1 Primary Assembly 18467 na contig28 unplaced-scaffold na na AYOZ01000021.1 = NZ_AYOZ01000021.1 Primary Assembly 17078 na contig29 unplaced-scaffold na na AYOZ01000022.1 = NZ_AYOZ01000022.1 Primary Assembly 10195 na contig3 unplaced-scaffold na na AYOZ01000023.1 = NZ_AYOZ01000023.1 Primary Assembly 310806 na contig30 unplaced-scaffold na na AYOZ01000024.1 = NZ_AYOZ01000024.1 Primary Assembly 10166 na contig31 unplaced-scaffold na na AYOZ01000025.1 = NZ_AYOZ01000025.1 Primary Assembly 8964 na contig32 unplaced-scaffold na na AYOZ01000026.1 = NZ_AYOZ01000026.1 Primary Assembly 7684 na contig33 unplaced-scaffold na na AYOZ01000027.1 = NZ_AYOZ01000027.1 Primary Assembly 6957 na contig34 unplaced-scaffold na na AYOZ01000028.1 = NZ_AYOZ01000028.1 Primary Assembly 5879 na contig35 unplaced-scaffold na na AYOZ01000029.1 = NZ_AYOZ01000029.1 Primary Assembly 5734 na contig36 unplaced-scaffold na na AYOZ01000030.1 = NZ_AYOZ01000030.1 Primary Assembly 3505 na contig37 unplaced-scaffold na na AYOZ01000031.1 = NZ_AYOZ01000031.1 Primary Assembly 3478 na contig38 unplaced-scaffold na na AYOZ01000032.1 = NZ_AYOZ01000032.1 Primary Assembly 2922 na contig39 unplaced-scaffold na na AYOZ01000033.1 = NZ_AYOZ01000033.1 Primary Assembly 2889 na contig4 unplaced-scaffold na na AYOZ01000034.1 = NZ_AYOZ01000034.1 Primary Assembly 293933 na contig40 unplaced-scaffold na na AYOZ01000035.1 = NZ_AYOZ01000035.1 Primary Assembly 2815 na contig41 unplaced-scaffold na na AYOZ01000036.1 = NZ_AYOZ01000036.1 Primary Assembly 2544 na contig42 unplaced-scaffold na na AYOZ01000037.1 = NZ_AYOZ01000037.1 Primary Assembly 2393 na contig43 unplaced-scaffold na na AYOZ01000038.1 = NZ_AYOZ01000038.1 Primary Assembly 2385 na contig44 unplaced-scaffold na na AYOZ01000039.1 = NZ_AYOZ01000039.1 Primary Assembly 2190 na contig45 unplaced-scaffold na na AYOZ01000040.1 = NZ_AYOZ01000040.1 Primary Assembly 1815 na contig46 unplaced-scaffold na na AYOZ01000041.1 = NZ_AYOZ01000041.1 Primary Assembly 1720 na contig47 unplaced-scaffold na na AYOZ01000042.1 = NZ_AYOZ01000042.1 Primary Assembly 1616 na contig48 unplaced-scaffold na na AYOZ01000043.1 = NZ_AYOZ01000043.1 Primary Assembly 1503 na contig49 unplaced-scaffold na na AYOZ01000044.1 = NZ_AYOZ01000044.1 Primary Assembly 1364 na contig5 unplaced-scaffold na na AYOZ01000045.1 = NZ_AYOZ01000045.1 Primary Assembly 235758 na contig50 unplaced-scaffold na na AYOZ01000046.1 = NZ_AYOZ01000046.1 Primary Assembly 971 na contig51 unplaced-scaffold na na AYOZ01000047.1 = NZ_AYOZ01000047.1 Primary Assembly 948 na contig52 unplaced-scaffold na na AYOZ01000048.1 = NZ_AYOZ01000048.1 Primary Assembly 885 na contig53 unplaced-scaffold na na AYOZ01000049.1 = NZ_AYOZ01000049.1 Primary Assembly 827 na contig54 unplaced-scaffold na na AYOZ01000050.1 = NZ_AYOZ01000050.1 Primary Assembly 662 na contig55 unplaced-scaffold na na AYOZ01000051.1 = NZ_AYOZ01000051.1 Primary Assembly 654 na contig56 unplaced-scaffold na na AYOZ01000052.1 = NZ_AYOZ01000052.1 Primary Assembly 614 na contig57 unplaced-scaffold na na AYOZ01000053.1 = NZ_AYOZ01000053.1 Primary Assembly 578 na contig58 unplaced-scaffold na na AYOZ01000054.1 = NZ_AYOZ01000054.1 Primary Assembly 550 na contig59 unplaced-scaffold na na AYOZ01000055.1 = NZ_AYOZ01000055.1 Primary Assembly 530 na contig6 unplaced-scaffold na na AYOZ01000056.1 = NZ_AYOZ01000056.1 Primary Assembly 219434 na contig60 unplaced-scaffold na na AYOZ01000057.1 = NZ_AYOZ01000057.1 Primary Assembly 508 na contig61 unplaced-scaffold na na AYOZ01000058.1 = NZ_AYOZ01000058.1 Primary Assembly 335 na contig62 unplaced-scaffold na na AYOZ01000059.1 = NZ_AYOZ01000059.1 Primary Assembly 244 na contig7 unplaced-scaffold na na AYOZ01000060.1 = NZ_AYOZ01000060.1 Primary Assembly 207434 na contig8 unplaced-scaffold na na AYOZ01000061.1 = NZ_AYOZ01000061.1 Primary Assembly 185586 na contig9 unplaced-scaffold na na AYOZ01000062.1 = NZ_AYOZ01000062.1 Primary Assembly 154537 na