# Assembly name: gtlEnvA5udCFS # Organism name: Methanosarcina mazei (euryarchaeotes) # Infraspecific name: strain=2.F.T.0.2 # Taxid: 2209 # BioSample: SAMN02708943 # BioProject: PRJNA242781 # Submitter: University of Illinois at Urbana-Champaign # Date: 2015-04-23 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JJOT01 # Assembly method: IDBA-UD v. 1.1.0 # Genome coverage: 43.9x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_000979375.1 # RefSeq assembly accession: GCF_000979375.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000979405.1 GCF_000979405.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold102_1_size6741-refined unplaced-scaffold na na JJOT01000001.1 = NZ_JJOT01000001.1 Primary Assembly 6741 na scaffold84_1_size12978-refined unplaced-scaffold na na JJOT01000002.1 = NZ_JJOT01000002.1 Primary Assembly 12978 na scaffold45_1_size33952-refined unplaced-scaffold na na JJOT01000003.1 = NZ_JJOT01000003.1 Primary Assembly 33697 na scaffold98_1_size7535-refined unplaced-scaffold na na JJOT01000004.1 = NZ_JJOT01000004.1 Primary Assembly 7535 na scaffold130_1_size1460-refined unplaced-scaffold na na JJOT01000005.1 = NZ_JJOT01000005.1 Primary Assembly 1460 na scaffold66_1_size32265-refined unplaced-scaffold na na JJOT01000006.1 = NZ_JJOT01000006.1 Primary Assembly 32263 na scaffold16_1_size52766-refined unplaced-scaffold na na JJOT01000007.1 = NZ_JJOT01000007.1 Primary Assembly 52466 na scaffold62_1_size21672-refined unplaced-scaffold na na JJOT01000008.1 = NZ_JJOT01000008.1 Primary Assembly 21672 na scaffold60_1_size22335-refined unplaced-scaffold na na JJOT01000009.1 = NZ_JJOT01000009.1 Primary Assembly 22335 na scaffold96_1_size7994-refined unplaced-scaffold na na JJOT01000010.1 = NZ_JJOT01000010.1 Primary Assembly 7994 na scaffold65_1_size20905-refined unplaced-scaffold na na JJOT01000011.1 = NZ_JJOT01000011.1 Primary Assembly 20905 na scaffold119_1_size2738-refined unplaced-scaffold na na JJOT01000012.1 = NZ_JJOT01000012.1 Primary Assembly 2738 na scaffold77_1_size15258-refined unplaced-scaffold na na JJOT01000013.1 = NZ_JJOT01000013.1 Primary Assembly 15161 na scaffold29_1_size64840-refined unplaced-scaffold na na JJOT01000014.1 = NZ_JJOT01000014.1 Primary Assembly 64822 na scaffold51_1_size25196-refined unplaced-scaffold na na JJOT01000015.1 = NZ_JJOT01000015.1 Primary Assembly 25196 na scaffold39_1_size39430-refined unplaced-scaffold na na JJOT01000016.1 = NZ_JJOT01000016.1 Primary Assembly 39217 na scaffold110_1_size5032-refined unplaced-scaffold na na JJOT01000017.1 = NZ_JJOT01000017.1 Primary Assembly 4952 na scaffold86_1_size12283-refined unplaced-scaffold na na JJOT01000018.1 = NZ_JJOT01000018.1 Primary Assembly 12283 na scaffold56_1_size22884-refined unplaced-scaffold na na JJOT01000019.1 = NZ_JJOT01000019.1 Primary Assembly 22674 na scaffold2_1_size277413-refined unplaced-scaffold na na JJOT01000020.1 = NZ_JJOT01000020.1 Primary Assembly 276710 na scaffold54_1_size23597-refined unplaced-scaffold na na JJOT01000021.1 = NZ_JJOT01000021.1 Primary Assembly 23597 na scaffold20_1_size50105-refined unplaced-scaffold na na JJOT01000022.1 = NZ_JJOT01000022.1 Primary Assembly 50105 na scaffold17_1_size95083-refined unplaced-scaffold na na JJOT01000023.1 = NZ_JJOT01000023.1 Primary Assembly 89042 na scaffold80_1_size14608-refined unplaced-scaffold na na JJOT01000024.1 = NZ_JJOT01000024.1 Primary Assembly 14608 na scaffold27_1_size42609-refined unplaced-scaffold na na JJOT01000025.1 = NZ_JJOT01000025.1 Primary Assembly 42506 na scaffold120_1_size2645-refined unplaced-scaffold na na JJOT01000026.1 = NZ_JJOT01000026.1 Primary Assembly 2645 na scaffold117_1_size7590-refined unplaced-scaffold na na JJOT01000027.1 = NZ_JJOT01000027.1 Primary Assembly 7008 na scaffold9_1_size170190-refined unplaced-scaffold na na JJOT01000028.1 = NZ_JJOT01000028.1 Primary Assembly 169840 na scaffold122_1_size2353-refined unplaced-scaffold na na JJOT01000029.1 = NZ_JJOT01000029.1 Primary Assembly 2353 na scaffold90_1_size9887-refined unplaced-scaffold na na JJOT01000030.1 = NZ_JJOT01000030.1 Primary Assembly 9862 na scaffold87_1_size12037-refined unplaced-scaffold na na JJOT01000031.1 = NZ_JJOT01000031.1 Primary Assembly 12037 na scaffold82_1_size13467-refined unplaced-scaffold na na JJOT01000032.1 = NZ_JJOT01000032.1 Primary Assembly 13330 na scaffold52_1_size24375-refined unplaced-scaffold na na JJOT01000033.1 = NZ_JJOT01000033.1 Primary Assembly 23940 na scaffold114_1_size4353-refined unplaced-scaffold na na JJOT01000034.1 = NZ_JJOT01000034.1 Primary Assembly 4353 na scaffold93_1_size8961-refined unplaced-scaffold na na JJOT01000035.1 = NZ_JJOT01000035.1 Primary Assembly 8961 na scaffold95_1_size8410-refined unplaced-scaffold na na JJOT01000036.1 = NZ_JJOT01000036.1 Primary Assembly 8410 na scaffold71_1_size17877-refined unplaced-scaffold na na JJOT01000037.1 = NZ_JJOT01000037.1 Primary Assembly 17877 na scaffold58_1_size37208-refined unplaced-scaffold na na JJOT01000038.1 = NZ_JJOT01000038.1 Primary Assembly 37008 na scaffold101_1_size13224-refined unplaced-scaffold na na JJOT01000039.1 = NZ_JJOT01000039.1 Primary Assembly 12638 na scaffold24_1_size50003-refined unplaced-scaffold na na JJOT01000040.1 = NZ_JJOT01000040.1 Primary Assembly 50003 na scaffold132_1_size1109-refined unplaced-scaffold na na JJOT01000041.1 = NZ_JJOT01000041.1 Primary Assembly 1109 na scaffold127_1_size1734-refined unplaced-scaffold na na JJOT01000042.1 = NZ_JJOT01000042.1 Primary Assembly 1634 na scaffold49_1_size26247-refined unplaced-scaffold na na JJOT01000043.1 = NZ_JJOT01000043.1 Primary Assembly 26247 na scaffold123_1_size2091-refined unplaced-scaffold na na JJOT01000044.1 = NZ_JJOT01000044.1 Primary Assembly 2091 na scaffold38_1_size32717-refined unplaced-scaffold na na JJOT01000045.1 = NZ_JJOT01000045.1 Primary Assembly 32617 na scaffold63_1_size21515-refined unplaced-scaffold na na JJOT01000046.1 = NZ_JJOT01000046.1 Primary Assembly 21515 na scaffold36_1_size33977-refined unplaced-scaffold na na JJOT01000047.1 = NZ_JJOT01000047.1 Primary Assembly 33977 na scaffold113_1_size4427-refined unplaced-scaffold na na JJOT01000048.1 = NZ_JJOT01000048.1 Primary Assembly 4427 na scaffold64_1_size21321-refined unplaced-scaffold na na JJOT01000049.1 = NZ_JJOT01000049.1 Primary Assembly 21321 na scaffold46_1_size26648-refined unplaced-scaffold na na JJOT01000050.1 = NZ_JJOT01000050.1 Primary Assembly 26648 na scaffold111_1_size4951-refined unplaced-scaffold na na JJOT01000051.1 = NZ_JJOT01000051.1 Primary Assembly 4869 na scaffold42_1_size29417-refined unplaced-scaffold na na JJOT01000052.1 = NZ_JJOT01000052.1 Primary Assembly 29417 na scaffold1_1_size162897-refined unplaced-scaffold na na JJOT01000053.1 = NZ_JJOT01000053.1 Primary Assembly 162114 na scaffold73_1_size17447-refined unplaced-scaffold na na JJOT01000054.1 = NZ_JJOT01000054.1 Primary Assembly 17447 na scaffold67_1_size20801-refined unplaced-scaffold na na JJOT01000055.1 = NZ_JJOT01000055.1 Primary Assembly 20801 na scaffold92_1_size8970-refined unplaced-scaffold na na JJOT01000056.1 = NZ_JJOT01000056.1 Primary Assembly 8970 na scaffold85_1_size12285-refined unplaced-scaffold na na JJOT01000057.1 = NZ_JJOT01000057.1 Primary Assembly 12285 na scaffold81_1_size13906-refined unplaced-scaffold na na JJOT01000058.1 = NZ_JJOT01000058.1 Primary Assembly 13906 na scaffold13_1_size162225-refined unplaced-scaffold na na JJOT01000059.1 = NZ_JJOT01000059.1 Primary Assembly 160774 na scaffold121_1_size2421-refined unplaced-scaffold na na JJOT01000060.1 = NZ_JJOT01000060.1 Primary Assembly 2421 na scaffold32_1_size44372-refined unplaced-scaffold na na JJOT01000061.1 = NZ_JJOT01000061.1 Primary Assembly 44453 na scaffold5_1_size88936-refined unplaced-scaffold na na JJOT01000062.1 = NZ_JJOT01000062.1 Primary Assembly 88732 na scaffold131_1_size1422-refined unplaced-scaffold na na JJOT01000063.1 = NZ_JJOT01000063.1 Primary Assembly 1422 na scaffold25_1_size46197-refined unplaced-scaffold na na JJOT01000064.1 = NZ_JJOT01000064.1 Primary Assembly 46182 na scaffold55_1_size23355-refined unplaced-scaffold na na JJOT01000065.1 = NZ_JJOT01000065.1 Primary Assembly 23268 na scaffold75_1_size16814-refined unplaced-scaffold na na JJOT01000066.1 = NZ_JJOT01000066.1 Primary Assembly 16814 na scaffold59_1_size22384-refined unplaced-scaffold na na JJOT01000067.1 = NZ_JJOT01000067.1 Primary Assembly 22384 na scaffold3_1_size101589-refined unplaced-scaffold na na JJOT01000068.1 = NZ_JJOT01000068.1 Primary Assembly 101289 na scaffold107_1_size5498-refined unplaced-scaffold na na JJOT01000069.1 = NZ_JJOT01000069.1 Primary Assembly 5498 na scaffold109_1_size5263-refined unplaced-scaffold na na JJOT01000070.1 = NZ_JJOT01000070.1 Primary Assembly 5263 na scaffold136_1_size525-refined unplaced-scaffold na na JJOT01000071.1 = NZ_JJOT01000071.1 Primary Assembly 525 na scaffold126_1_size1740-refined unplaced-scaffold na na JJOT01000072.1 = NZ_JJOT01000072.1 Primary Assembly 1740 na scaffold118_1_size2799-refined unplaced-scaffold na na JJOT01000073.1 = NZ_JJOT01000073.1 Primary Assembly 2799 na scaffold68_1_size18432-refined unplaced-scaffold na na JJOT01000074.1 = NZ_JJOT01000074.1 Primary Assembly 18432 na scaffold133_1_size830-refined unplaced-scaffold na na JJOT01000075.1 = NZ_JJOT01000075.1 Primary Assembly 830 na scaffold79_1_size14654-refined unplaced-scaffold na na JJOT01000076.1 = NZ_JJOT01000076.1 Primary Assembly 14580 na scaffold23_1_size46512-refined unplaced-scaffold na na JJOT01000077.1 = NZ_JJOT01000077.1 Primary Assembly 46476 na scaffold19_1_size50535-refined unplaced-scaffold na na JJOT01000078.1 = NZ_JJOT01000078.1 Primary Assembly 50618 na scaffold72_1_size17719-refined unplaced-scaffold na na JJOT01000079.1 = NZ_JJOT01000079.1 Primary Assembly 17719 na scaffold30_1_size41050-refined unplaced-scaffold na na JJOT01000080.1 = NZ_JJOT01000080.1 Primary Assembly 40950 na scaffold21_1_size49669-refined unplaced-scaffold na na JJOT01000081.1 = NZ_JJOT01000081.1 Primary Assembly 49416 na scaffold50_1_size25370-refined unplaced-scaffold na na JJOT01000082.1 = NZ_JJOT01000082.1 Primary Assembly 25370 na scaffold74_1_size17006-refined unplaced-scaffold na na JJOT01000083.1 = NZ_JJOT01000083.1 Primary Assembly 17006 na scaffold12_1_size59957-refined unplaced-scaffold na na JJOT01000084.1 = NZ_JJOT01000084.1 Primary Assembly 59561 na scaffold104_1_size6082-refined unplaced-scaffold na na JJOT01000085.1 = NZ_JJOT01000085.1 Primary Assembly 6082 na scaffold103_1_size6668-refined unplaced-scaffold na na JJOT01000086.1 = NZ_JJOT01000086.1 Primary Assembly 6429 na scaffold135_1_size558-refined unplaced-scaffold na na JJOT01000087.1 = NZ_JJOT01000087.1 Primary Assembly 558 na scaffold83_1_size13396-refined unplaced-scaffold na na JJOT01000088.1 = NZ_JJOT01000088.1 Primary Assembly 13396 na scaffold28_1_size42067-refined unplaced-scaffold na na JJOT01000089.1 = NZ_JJOT01000089.1 Primary Assembly 42067 na scaffold61_1_size21878-refined unplaced-scaffold na na JJOT01000090.1 = NZ_JJOT01000090.1 Primary Assembly 21878 na scaffold89_1_size12595-refined unplaced-scaffold na na JJOT01000091.1 = NZ_JJOT01000091.1 Primary Assembly 12595 na scaffold129_1_size1517-refined unplaced-scaffold na na JJOT01000092.1 = NZ_JJOT01000092.1 Primary Assembly 1517 na scaffold41_1_size30369-refined unplaced-scaffold na na JJOT01000093.1 = NZ_JJOT01000093.1 Primary Assembly 30369 na scaffold44_1_size29039-refined unplaced-scaffold na na JJOT01000094.1 = NZ_JJOT01000094.1 Primary Assembly 28534 na scaffold34_1_size36697-refined unplaced-scaffold na na JJOT01000095.1 = NZ_JJOT01000095.1 Primary Assembly 36697 na scaffold47_1_size26295-refined unplaced-scaffold na na JJOT01000096.1 = NZ_JJOT01000096.1 Primary Assembly 26295 na scaffold7_1_size73484-refined unplaced-scaffold na na JJOT01000097.1 = NZ_JJOT01000097.1 Primary Assembly 73384 na scaffold26_1_size64281-refined unplaced-scaffold na na JJOT01000098.1 = NZ_JJOT01000098.1 Primary Assembly 63981 na scaffold22_1_size49508-refined unplaced-scaffold na na JJOT01000099.1 = NZ_JJOT01000099.1 Primary Assembly 49266 na scaffold10_1_size66419-refined unplaced-scaffold na na JJOT01000100.1 = NZ_JJOT01000100.1 Primary Assembly 66142 na scaffold37_1_size33908-refined unplaced-scaffold na na JJOT01000101.1 = NZ_JJOT01000101.1 Primary Assembly 33884 na scaffold6_1_size141049-refined unplaced-scaffold na na JJOT01000102.1 = NZ_JJOT01000102.1 Primary Assembly 140553 na scaffold76_1_size16322-refined unplaced-scaffold na na JJOT01000103.1 = NZ_JJOT01000103.1 Primary Assembly 16209 na scaffold134_1_size710-refined unplaced-scaffold na na JJOT01000104.1 = NZ_JJOT01000104.1 Primary Assembly 710 na scaffold43_1_size28712-refined unplaced-scaffold na na JJOT01000105.1 = NZ_JJOT01000105.1 Primary Assembly 28712 na scaffold53_1_size23994-refined unplaced-scaffold na na JJOT01000106.1 = NZ_JJOT01000106.1 Primary Assembly 23994 na scaffold31_1_size40334-refined unplaced-scaffold na na JJOT01000107.1 = NZ_JJOT01000107.1 Primary Assembly 40201 na scaffold112_1_size4811-refined unplaced-scaffold na na JJOT01000108.1 = NZ_JJOT01000108.1 Primary Assembly 4803 na scaffold15_1_size89073-refined unplaced-scaffold na na JJOT01000109.1 = NZ_JJOT01000109.1 Primary Assembly 88694 na scaffold35_1_size34579-refined unplaced-scaffold na na JJOT01000110.1 = NZ_JJOT01000110.1 Primary Assembly 34579 na scaffold70_1_size17900-refined unplaced-scaffold na na JJOT01000111.1 = NZ_JJOT01000111.1 Primary Assembly 17900 na scaffold14_1_size60765-refined unplaced-scaffold na na JJOT01000112.1 = NZ_JJOT01000112.1 Primary Assembly 60765 na scaffold100_1_size6834-refined unplaced-scaffold na na JJOT01000113.1 = NZ_JJOT01000113.1 Primary Assembly 6834 na scaffold40_1_size30908-refined unplaced-scaffold na na JJOT01000114.1 = NZ_JJOT01000114.1 Primary Assembly 30808 na scaffold91_1_size9801-refined unplaced-scaffold na na JJOT01000115.1 = NZ_JJOT01000115.1 Primary Assembly 9579 na scaffold4_1_size91908-refined unplaced-scaffold na na JJOT01000116.1 = NZ_JJOT01000116.1 Primary Assembly 91732 na scaffold116_1_size3341-refined unplaced-scaffold na na JJOT01000117.1 = NZ_JJOT01000117.1 Primary Assembly 3341 na scaffold106_1_size5658-refined unplaced-scaffold na na JJOT01000118.1 = NZ_JJOT01000118.1 Primary Assembly 5658 na scaffold125_1_size1816-refined unplaced-scaffold na na JJOT01000119.1 = NZ_JJOT01000119.1 Primary Assembly 1816 na scaffold108_1_size5485-refined unplaced-scaffold na na JJOT01000120.1 = NZ_JJOT01000120.1 Primary Assembly 5368 na scaffold124_1_size1844-refined unplaced-scaffold na na JJOT01000121.1 = NZ_JJOT01000121.1 Primary Assembly 1744 na scaffold48_1_size38327-refined unplaced-scaffold na na JJOT01000122.1 = NZ_JJOT01000122.1 Primary Assembly 38290 na scaffold105_1_size6026-refined unplaced-scaffold na na JJOT01000123.1 = NZ_JJOT01000123.1 Primary Assembly 6026 na scaffold115_1_size3444-refined unplaced-scaffold na na JJOT01000124.1 = NZ_JJOT01000124.1 Primary Assembly 3444 na scaffold69_1_size18200-refined unplaced-scaffold na na JJOT01000125.1 = NZ_JJOT01000125.1 Primary Assembly 18200 na scaffold78_1_size14948-refined unplaced-scaffold na na JJOT01000126.1 = NZ_JJOT01000126.1 Primary Assembly 14948 na scaffold97_1_size7709-refined unplaced-scaffold na na JJOT01000127.1 = NZ_JJOT01000127.1 Primary Assembly 7709 na scaffold33_1_size37059-refined unplaced-scaffold na na JJOT01000128.1 = NZ_JJOT01000128.1 Primary Assembly 36959 na scaffold128_1_size1708-refined unplaced-scaffold na na JJOT01000129.1 = NZ_JJOT01000129.1 Primary Assembly 1708 na scaffold88_1_size11974-refined unplaced-scaffold na na JJOT01000130.1 = NZ_JJOT01000130.1 Primary Assembly 11974 na scaffold57_1_size22668-refined unplaced-scaffold na na JJOT01000131.1 = NZ_JJOT01000131.1 Primary Assembly 22468 na scaffold8_1_size81967-refined unplaced-scaffold na na JJOT01000132.1 = NZ_JJOT01000132.1 Primary Assembly 81867 na scaffold99_1_size6900-refined unplaced-scaffold na na JJOT01000133.1 = NZ_JJOT01000133.1 Primary Assembly 6900 na scaffold18_1_size51964-refined unplaced-scaffold na na JJOT01000134.1 = NZ_JJOT01000134.1 Primary Assembly 51764 na scaffold11_1_size64888-refined unplaced-scaffold na na JJOT01000135.1 = NZ_JJOT01000135.1 Primary Assembly 64652 na scaffold94_1_size8478-refined unplaced-scaffold na na JJOT01000136.1 = NZ_JJOT01000136.1 Primary Assembly 8478 na