# Assembly name: gtlEnvA5udCFS # Organism name: Methanosarcina sp. 2.H.A.1B.4 (euryarchaeotes) # Infraspecific name: strain=2.H.A.1B.4 # Taxid: 1483600 # BioSample: SAMN02708992 # BioProject: PRJNA242781 # Submitter: University of Illinois at Urbana-Champaign # Date: 2015-04-23 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JJOV01 # Assembly method: IDBA-UD v. 1.1.0 # Genome coverage: 46.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_000979385.1 # RefSeq assembly accession: GCF_000979385.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000979395.1 GCF_000979395.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold62_1_size19787-refined unplaced-scaffold na na JJOV01000001.1 = NZ_JJOV01000001.1 Primary Assembly 19787 na scaffold2_1_size194113-refined unplaced-scaffold na na JJOV01000002.1 = NZ_JJOV01000002.1 Primary Assembly 193657 na scaffold89_1_size3704-refined unplaced-scaffold na na JJOV01000003.1 = NZ_JJOV01000003.1 Primary Assembly 3704 na scaffold7_1_size97916-refined unplaced-scaffold na na JJOV01000004.1 = NZ_JJOV01000004.1 Primary Assembly 97899 na scaffold47_1_size28078-refined unplaced-scaffold na na JJOV01000005.1 = NZ_JJOV01000005.1 Primary Assembly 27978 na scaffold21_1_size59828-refined unplaced-scaffold na na JJOV01000006.1 = NZ_JJOV01000006.1 Primary Assembly 59802 na scaffold68_1_size14722-refined unplaced-scaffold na na JJOV01000007.1 = NZ_JJOV01000007.1 Primary Assembly 14722 na scaffold17_1_size68889-refined unplaced-scaffold na na JJOV01000008.1 = NZ_JJOV01000008.1 Primary Assembly 68889 na scaffold67_1_size16573-refined unplaced-scaffold na na JJOV01000009.1 = NZ_JJOV01000009.1 Primary Assembly 16475 na scaffold66_1_size17026-refined unplaced-scaffold na na JJOV01000010.1 = NZ_JJOV01000010.1 Primary Assembly 17026 na scaffold13_1_size74754-refined unplaced-scaffold na na JJOV01000011.1 = NZ_JJOV01000011.1 Primary Assembly 74517 na scaffold94_1_size515-refined unplaced-scaffold na na JJOV01000012.1 = NZ_JJOV01000012.1 Primary Assembly 515 na scaffold79_1_size7175-refined unplaced-scaffold na na JJOV01000013.1 = NZ_JJOV01000013.1 Primary Assembly 7175 na scaffold15_1_size101270-refined unplaced-scaffold na na JJOV01000014.1 = NZ_JJOV01000014.1 Primary Assembly 100970 na scaffold50_1_size26257-refined unplaced-scaffold na na JJOV01000015.1 = NZ_JJOV01000015.1 Primary Assembly 26257 na scaffold23_1_size56218-refined unplaced-scaffold na na JJOV01000016.1 = NZ_JJOV01000016.1 Primary Assembly 56051 na scaffold58_1_size21149-refined unplaced-scaffold na na JJOV01000017.1 = NZ_JJOV01000017.1 Primary Assembly 21149 na scaffold88_1_size3787-refined unplaced-scaffold na na JJOV01000018.1 = NZ_JJOV01000018.1 Primary Assembly 3787 na scaffold27_1_size48144-refined unplaced-scaffold na na JJOV01000019.1 = NZ_JJOV01000019.1 Primary Assembly 48144 na scaffold91_1_size3044-refined unplaced-scaffold na na JJOV01000020.1 = NZ_JJOV01000020.1 Primary Assembly 3044 na scaffold93_1_size632-refined unplaced-scaffold na na JJOV01000021.1 = NZ_JJOV01000021.1 Primary Assembly 632 na scaffold64_1_size19194-refined unplaced-scaffold na na JJOV01000022.1 = NZ_JJOV01000022.1 Primary Assembly 19194 na scaffold90_1_size3051-refined unplaced-scaffold na na JJOV01000023.1 = NZ_JJOV01000023.1 Primary Assembly 3051 na scaffold43_1_size30824-refined unplaced-scaffold na na JJOV01000024.1 = NZ_JJOV01000024.1 Primary Assembly 30761 na scaffold31_1_size41484-refined unplaced-scaffold na na JJOV01000025.1 = NZ_JJOV01000025.1 Primary Assembly 41484 na scaffold70_1_size14509-refined unplaced-scaffold na na JJOV01000026.1 = NZ_JJOV01000026.1 Primary Assembly 14509 na scaffold65_1_size18978-refined unplaced-scaffold na na JJOV01000027.1 = NZ_JJOV01000027.1 Primary Assembly 18978 na scaffold44_1_size30327-refined unplaced-scaffold na na JJOV01000028.1 = NZ_JJOV01000028.1 Primary Assembly 30327 na scaffold59_1_size20921-refined unplaced-scaffold na na JJOV01000029.1 = NZ_JJOV01000029.1 Primary Assembly 20921 na scaffold86_1_size5251-refined unplaced-scaffold na na JJOV01000030.1 = NZ_JJOV01000030.1 Primary Assembly 5251 na scaffold3_1_size185154-refined unplaced-scaffold na na JJOV01000031.1 = NZ_JJOV01000031.1 Primary Assembly 185056 na scaffold60_1_size19931-refined unplaced-scaffold na na JJOV01000032.1 = NZ_JJOV01000032.1 Primary Assembly 19827 na scaffold8_1_size95506-refined unplaced-scaffold na na JJOV01000033.1 = NZ_JJOV01000033.1 Primary Assembly 94991 na scaffold46_1_size28194-refined unplaced-scaffold na na JJOV01000034.1 = NZ_JJOV01000034.1 Primary Assembly 28194 na scaffold74_1_size10778-refined unplaced-scaffold na na JJOV01000035.1 = NZ_JJOV01000035.1 Primary Assembly 10778 na scaffold34_1_size40516-refined unplaced-scaffold na na JJOV01000036.1 = NZ_JJOV01000036.1 Primary Assembly 40516 na scaffold42_1_size31967-refined unplaced-scaffold na na JJOV01000037.1 = NZ_JJOV01000037.1 Primary Assembly 31967 na scaffold56_1_size22001-refined unplaced-scaffold na na JJOV01000038.1 = NZ_JJOV01000038.1 Primary Assembly 22001 na scaffold33_1_size40925-refined unplaced-scaffold na na JJOV01000039.1 = NZ_JJOV01000039.1 Primary Assembly 40791 na scaffold84_1_size5652-refined unplaced-scaffold na na JJOV01000040.1 = NZ_JJOV01000040.1 Primary Assembly 5508 na scaffold11_1_size81276-refined unplaced-scaffold na na JJOV01000041.1 = NZ_JJOV01000041.1 Primary Assembly 81076 na scaffold30_1_size42058-refined unplaced-scaffold na na JJOV01000042.1 = NZ_JJOV01000042.1 Primary Assembly 41868 na scaffold71_1_size13159-refined unplaced-scaffold na na JJOV01000043.1 = NZ_JJOV01000043.1 Primary Assembly 13159 na scaffold16_1_size69385-refined unplaced-scaffold na na JJOV01000044.1 = NZ_JJOV01000044.1 Primary Assembly 68890 na scaffold35_1_size39257-refined unplaced-scaffold na na JJOV01000045.1 = NZ_JJOV01000045.1 Primary Assembly 39158 na scaffold78_1_size8342-refined unplaced-scaffold na na JJOV01000046.1 = NZ_JJOV01000046.1 Primary Assembly 8342 na scaffold61_1_size30066-refined unplaced-scaffold na na JJOV01000047.1 = NZ_JJOV01000047.1 Primary Assembly 30066 na scaffold76_1_size8621-refined unplaced-scaffold na na JJOV01000048.1 = NZ_JJOV01000048.1 Primary Assembly 8621 na scaffold45_1_size30047-refined unplaced-scaffold na na JJOV01000049.1 = NZ_JJOV01000049.1 Primary Assembly 30047 na scaffold22_1_size57402-refined unplaced-scaffold na na JJOV01000050.1 = NZ_JJOV01000050.1 Primary Assembly 57304 na scaffold38_1_size36872-refined unplaced-scaffold na na JJOV01000051.1 = NZ_JJOV01000051.1 Primary Assembly 36682 na scaffold19_1_size65740-refined unplaced-scaffold na na JJOV01000052.1 = NZ_JJOV01000052.1 Primary Assembly 65740 na scaffold18_1_size66311-refined unplaced-scaffold na na JJOV01000053.1 = NZ_JJOV01000053.1 Primary Assembly 66144 na scaffold32_1_size41380-refined unplaced-scaffold na na JJOV01000054.1 = NZ_JJOV01000054.1 Primary Assembly 41195 na scaffold52_1_size23180-refined unplaced-scaffold na na JJOV01000055.1 = NZ_JJOV01000055.1 Primary Assembly 23080 na scaffold14_1_size121305-refined unplaced-scaffold na na JJOV01000056.1 = NZ_JJOV01000056.1 Primary Assembly 120821 na scaffold63_1_size19539-refined unplaced-scaffold na na JJOV01000057.1 = NZ_JJOV01000057.1 Primary Assembly 19539 na scaffold77_1_size8484-refined unplaced-scaffold na na JJOV01000058.1 = NZ_JJOV01000058.1 Primary Assembly 8484 na scaffold37_1_size38603-refined unplaced-scaffold na na JJOV01000059.1 = NZ_JJOV01000059.1 Primary Assembly 38603 na scaffold51_1_size25303-refined unplaced-scaffold na na JJOV01000060.1 = NZ_JJOV01000060.1 Primary Assembly 25203 na scaffold85_1_size5417-refined unplaced-scaffold na na JJOV01000061.1 = NZ_JJOV01000061.1 Primary Assembly 5325 na scaffold40_1_size35562-refined unplaced-scaffold na na JJOV01000062.1 = NZ_JJOV01000062.1 Primary Assembly 35562 na scaffold20_1_size62826-refined unplaced-scaffold na na JJOV01000063.1 = NZ_JJOV01000063.1 Primary Assembly 62668 na scaffold69_1_size14640-refined unplaced-scaffold na na JJOV01000064.1 = NZ_JJOV01000064.1 Primary Assembly 14519 na scaffold36_1_size38832-refined unplaced-scaffold na na JJOV01000065.1 = NZ_JJOV01000065.1 Primary Assembly 38832 na scaffold53_1_size22698-refined unplaced-scaffold na na JJOV01000066.1 = NZ_JJOV01000066.1 Primary Assembly 22698 na scaffold82_1_size6098-refined unplaced-scaffold na na JJOV01000067.1 = NZ_JJOV01000067.1 Primary Assembly 6098 na scaffold49_1_size26408-refined unplaced-scaffold na na JJOV01000068.1 = NZ_JJOV01000068.1 Primary Assembly 26059 na scaffold92_1_size2194-refined unplaced-scaffold na na JJOV01000069.1 = NZ_JJOV01000069.1 Primary Assembly 2194 na scaffold41_1_size35425-refined unplaced-scaffold na na JJOV01000070.1 = NZ_JJOV01000070.1 Primary Assembly 35125 na scaffold39_1_size36654-refined unplaced-scaffold na na JJOV01000071.1 = NZ_JJOV01000071.1 Primary Assembly 36654 na scaffold54_1_size22475-refined unplaced-scaffold na na JJOV01000072.1 = NZ_JJOV01000072.1 Primary Assembly 22475 na scaffold24_1_size55104-refined unplaced-scaffold na na JJOV01000073.1 = NZ_JJOV01000073.1 Primary Assembly 55104 na scaffold12_1_size83397-refined unplaced-scaffold na na JJOV01000074.1 = NZ_JJOV01000074.1 Primary Assembly 83210 na scaffold87_1_size3926-refined unplaced-scaffold na na JJOV01000075.1 = NZ_JJOV01000075.1 Primary Assembly 3926 na scaffold83_1_size6032-refined unplaced-scaffold na na JJOV01000076.1 = NZ_JJOV01000076.1 Primary Assembly 6032 na scaffold81_1_size6140-refined unplaced-scaffold na na JJOV01000077.1 = NZ_JJOV01000077.1 Primary Assembly 6040 na scaffold10_1_size86884-refined unplaced-scaffold na na JJOV01000078.1 = NZ_JJOV01000078.1 Primary Assembly 86698 na scaffold75_1_size10612-refined unplaced-scaffold na na JJOV01000079.1 = NZ_JJOV01000079.1 Primary Assembly 10612 na scaffold4_1_size173997-refined unplaced-scaffold na na JJOV01000080.1 = NZ_JJOV01000080.1 Primary Assembly 173596 na scaffold9_1_size90377-refined unplaced-scaffold na na JJOV01000081.1 = NZ_JJOV01000081.1 Primary Assembly 90113 na scaffold6_1_size100992-refined unplaced-scaffold na na JJOV01000082.1 = NZ_JJOV01000082.1 Primary Assembly 100822 na scaffold28_1_size47772-refined unplaced-scaffold na na JJOV01000083.1 = NZ_JJOV01000083.1 Primary Assembly 47772 na scaffold80_1_size6531-refined unplaced-scaffold na na JJOV01000084.1 = NZ_JJOV01000084.1 Primary Assembly 6531 na scaffold26_1_size50134-refined unplaced-scaffold na na JJOV01000085.1 = NZ_JJOV01000085.1 Primary Assembly 49985 na scaffold73_1_size11070-refined unplaced-scaffold na na JJOV01000086.1 = NZ_JJOV01000086.1 Primary Assembly 11070 na scaffold55_1_size22371-refined unplaced-scaffold na na JJOV01000087.1 = NZ_JJOV01000087.1 Primary Assembly 22371 na scaffold48_1_size27190-refined unplaced-scaffold na na JJOV01000088.1 = NZ_JJOV01000088.1 Primary Assembly 27190 na scaffold72_1_size19221-refined unplaced-scaffold na na JJOV01000089.1 = NZ_JJOV01000089.1 Primary Assembly 19221 na scaffold1_1_size223263-refined unplaced-scaffold na na JJOV01000090.1 = NZ_JJOV01000090.1 Primary Assembly 222866 na scaffold25_1_size50548-refined unplaced-scaffold na na JJOV01000091.1 = NZ_JJOV01000091.1 Primary Assembly 50532 na scaffold57_1_size21336-refined unplaced-scaffold na na JJOV01000092.1 = NZ_JJOV01000092.1 Primary Assembly 21336 na scaffold29_1_size46944-refined unplaced-scaffold na na JJOV01000093.1 = NZ_JJOV01000093.1 Primary Assembly 46744 na scaffold5_1_size106864-refined unplaced-scaffold na na JJOV01000094.1 = NZ_JJOV01000094.1 Primary Assembly 106864 na