# Assembly name: gtlEnvA5udCFS # Organism name: Methanosarcina sp. 1.H.A.2.2 (euryarchaeotes) # Infraspecific name: strain=1.H.A.2.2 # Taxid: 1483601 # BioSample: SAMN02708993 # BioProject: PRJNA242781 # Submitter: University of Illinois at Urbana-Champaign # Date: 2015-04-23 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JJQL01 # Assembly method: IDBA-UD v. 1.1.0 # Genome coverage: 46.5x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_000979975.1 # RefSeq assembly accession: GCF_000979975.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000979985.1 GCF_000979985.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold90_1_size2141-refined unplaced-scaffold na na JJQL01000001.1 = NZ_JJQL01000001.1 Primary Assembly 2141 na scaffold27_1_size36724-refined unplaced-scaffold na na JJQL01000002.1 = NZ_JJQL01000002.1 Primary Assembly 36724 na scaffold41_1_size49586-refined unplaced-scaffold na na JJQL01000003.1 = NZ_JJQL01000003.1 Primary Assembly 49426 na scaffold28_1_size70258-refined unplaced-scaffold na na JJQL01000004.1 = NZ_JJQL01000004.1 Primary Assembly 70070 na scaffold31_1_size53618-refined unplaced-scaffold na na JJQL01000005.1 = NZ_JJQL01000005.1 Primary Assembly 53518 na scaffold47_1_size23459-refined unplaced-scaffold na na JJQL01000006.1 = NZ_JJQL01000006.1 Primary Assembly 23459 na scaffold2_1_size176803-refined unplaced-scaffold na na JJQL01000007.1 = NZ_JJQL01000007.1 Primary Assembly 176333 na scaffold29_1_size64131-refined unplaced-scaffold na na JJQL01000008.1 = NZ_JJQL01000008.1 Primary Assembly 63962 na scaffold36_1_size30436-refined unplaced-scaffold na na JJQL01000009.1 = NZ_JJQL01000009.1 Primary Assembly 30436 na scaffold80_1_size5932-refined unplaced-scaffold na na JJQL01000010.1 = NZ_JJQL01000010.1 Primary Assembly 5840 na scaffold72_1_size13482-refined unplaced-scaffold na na JJQL01000011.1 = NZ_JJQL01000011.1 Primary Assembly 13384 na scaffold97_1_size2613-refined unplaced-scaffold na na JJQL01000012.1 = NZ_JJQL01000012.1 Primary Assembly 2613 na scaffold92_1_size2044-refined unplaced-scaffold na na JJQL01000013.1 = NZ_JJQL01000013.1 Primary Assembly 2044 na scaffold66_1_size13150-refined unplaced-scaffold na na JJQL01000014.1 = NZ_JJQL01000014.1 Primary Assembly 13150 na scaffold20_1_size82197-refined unplaced-scaffold na na JJQL01000015.1 = NZ_JJQL01000015.1 Primary Assembly 82197 na scaffold32_1_size75662-refined unplaced-scaffold na na JJQL01000016.1 = NZ_JJQL01000016.1 Primary Assembly 75562 na scaffold70_1_size12088-refined unplaced-scaffold na na JJQL01000017.1 = NZ_JJQL01000017.1 Primary Assembly 12088 na scaffold61_1_size20989-refined unplaced-scaffold na na JJQL01000018.1 = NZ_JJQL01000018.1 Primary Assembly 20689 na scaffold8_1_size75799-refined unplaced-scaffold na na JJQL01000019.1 = NZ_JJQL01000019.1 Primary Assembly 75445 na scaffold15_1_size66719-refined unplaced-scaffold na na JJQL01000020.1 = NZ_JJQL01000020.1 Primary Assembly 66602 na scaffold33_1_size39654-refined unplaced-scaffold na na JJQL01000021.1 = NZ_JJQL01000021.1 Primary Assembly 39454 na scaffold98_1_size1465-refined unplaced-scaffold na na JJQL01000022.1 = NZ_JJQL01000022.1 Primary Assembly 1465 na scaffold63_1_size21157-refined unplaced-scaffold na na JJQL01000023.1 = NZ_JJQL01000023.1 Primary Assembly 20964 na scaffold95_1_size2942-refined unplaced-scaffold na na JJQL01000024.1 = NZ_JJQL01000024.1 Primary Assembly 2847 na scaffold79_1_size6303-refined unplaced-scaffold na na JJQL01000025.1 = NZ_JJQL01000025.1 Primary Assembly 6303 na scaffold62_1_size27435-refined unplaced-scaffold na na JJQL01000026.1 = NZ_JJQL01000026.1 Primary Assembly 27339 na scaffold67_1_size12919-refined unplaced-scaffold na na JJQL01000027.1 = NZ_JJQL01000027.1 Primary Assembly 12919 na scaffold91_1_size2051-refined unplaced-scaffold na na JJQL01000028.1 = NZ_JJQL01000028.1 Primary Assembly 2051 na scaffold78_1_size8762-refined unplaced-scaffold na na JJQL01000029.1 = NZ_JJQL01000029.1 Primary Assembly 8690 na scaffold6_1_size90874-refined unplaced-scaffold na na JJQL01000030.1 = NZ_JJQL01000030.1 Primary Assembly 90701 na scaffold69_1_size12175-refined unplaced-scaffold na na JJQL01000031.1 = NZ_JJQL01000031.1 Primary Assembly 12175 na scaffold54_1_size20449-refined unplaced-scaffold na na JJQL01000032.1 = NZ_JJQL01000032.1 Primary Assembly 20449 na scaffold34_1_size31370-refined unplaced-scaffold na na JJQL01000033.1 = NZ_JJQL01000033.1 Primary Assembly 31370 na scaffold46_1_size26271-refined unplaced-scaffold na na JJQL01000034.1 = NZ_JJQL01000034.1 Primary Assembly 26271 na scaffold101_1_size955-refined unplaced-scaffold na na JJQL01000035.1 = NZ_JJQL01000035.1 Primary Assembly 955 na scaffold18_1_size76776-refined unplaced-scaffold na na JJQL01000036.1 = NZ_JJQL01000036.1 Primary Assembly 76776 na scaffold7_1_size78667-refined unplaced-scaffold na na JJQL01000037.1 = NZ_JJQL01000037.1 Primary Assembly 78576 na scaffold5_1_size155851-refined unplaced-scaffold na na JJQL01000038.1 = NZ_JJQL01000038.1 Primary Assembly 155655 na scaffold87_1_size3316-refined unplaced-scaffold na na JJQL01000039.1 = NZ_JJQL01000039.1 Primary Assembly 3316 na scaffold68_1_size12295-refined unplaced-scaffold na na JJQL01000040.1 = NZ_JJQL01000040.1 Primary Assembly 12295 na scaffold12_1_size59381-refined unplaced-scaffold na na JJQL01000041.1 = NZ_JJQL01000041.1 Primary Assembly 59381 na scaffold73_1_size17477-refined unplaced-scaffold na na JJQL01000042.1 = NZ_JJQL01000042.1 Primary Assembly 17477 na scaffold58_1_size17932-refined unplaced-scaffold na na JJQL01000043.1 = NZ_JJQL01000043.1 Primary Assembly 17932 na scaffold96_1_size1892-refined unplaced-scaffold na na JJQL01000044.1 = NZ_JJQL01000044.1 Primary Assembly 1892 na scaffold50_1_size25590-refined unplaced-scaffold na na JJQL01000045.1 = NZ_JJQL01000045.1 Primary Assembly 25481 na scaffold57_1_size18074-refined unplaced-scaffold na na JJQL01000046.1 = NZ_JJQL01000046.1 Primary Assembly 18074 na scaffold76_1_size7824-refined unplaced-scaffold na na JJQL01000047.1 = NZ_JJQL01000047.1 Primary Assembly 7824 na scaffold45_1_size27368-refined unplaced-scaffold na na JJQL01000048.1 = NZ_JJQL01000048.1 Primary Assembly 27268 na scaffold53_1_size20499-refined unplaced-scaffold na na JJQL01000049.1 = NZ_JJQL01000049.1 Primary Assembly 20499 na scaffold89_1_size3007-refined unplaced-scaffold na na JJQL01000050.1 = NZ_JJQL01000050.1 Primary Assembly 3007 na scaffold64_1_size33904-refined unplaced-scaffold na na JJQL01000051.1 = NZ_JJQL01000051.1 Primary Assembly 33382 na scaffold38_1_size31102-refined unplaced-scaffold na na JJQL01000052.1 = NZ_JJQL01000052.1 Primary Assembly 31003 na scaffold23_1_size64332-refined unplaced-scaffold na na JJQL01000053.1 = NZ_JJQL01000053.1 Primary Assembly 64332 na scaffold82_1_size4577-refined unplaced-scaffold na na JJQL01000054.1 = NZ_JJQL01000054.1 Primary Assembly 4577 na scaffold11_1_size65294-refined unplaced-scaffold na na JJQL01000055.1 = NZ_JJQL01000055.1 Primary Assembly 65248 na scaffold19_1_size45537-refined unplaced-scaffold na na JJQL01000056.1 = NZ_JJQL01000056.1 Primary Assembly 45425 na scaffold51_1_size21038-refined unplaced-scaffold na na JJQL01000057.1 = NZ_JJQL01000057.1 Primary Assembly 21038 na scaffold35_1_size31328-refined unplaced-scaffold na na JJQL01000058.1 = NZ_JJQL01000058.1 Primary Assembly 31300 na scaffold4_1_size106823-refined unplaced-scaffold na na JJQL01000059.1 = NZ_JJQL01000059.1 Primary Assembly 106729 na scaffold99_1_size1383-refined unplaced-scaffold na na JJQL01000060.1 = NZ_JJQL01000060.1 Primary Assembly 1383 na scaffold14_1_size57135-refined unplaced-scaffold na na JJQL01000061.1 = NZ_JJQL01000061.1 Primary Assembly 57035 na scaffold37_1_size46539-refined unplaced-scaffold na na JJQL01000062.1 = NZ_JJQL01000062.1 Primary Assembly 46280 na scaffold13_1_size62190-refined unplaced-scaffold na na JJQL01000063.1 = NZ_JJQL01000063.1 Primary Assembly 61914 na scaffold49_1_size39566-refined unplaced-scaffold na na JJQL01000064.1 = NZ_JJQL01000064.1 Primary Assembly 39566 na scaffold77_1_size7686-refined unplaced-scaffold na na JJQL01000065.1 = NZ_JJQL01000065.1 Primary Assembly 7686 na scaffold24_1_size64168-refined unplaced-scaffold na na JJQL01000066.1 = NZ_JJQL01000066.1 Primary Assembly 64039 na scaffold103_1_size798-refined unplaced-scaffold na na JJQL01000067.1 = NZ_JJQL01000067.1 Primary Assembly 798 na scaffold42_1_size28812-refined unplaced-scaffold na na JJQL01000068.1 = NZ_JJQL01000068.1 Primary Assembly 28812 na scaffold81_1_size6503-refined unplaced-scaffold na na JJQL01000069.1 = NZ_JJQL01000069.1 Primary Assembly 6385 na scaffold30_1_size71169-refined unplaced-scaffold na na JJQL01000070.1 = NZ_JJQL01000070.1 Primary Assembly 71077 na scaffold83_1_size4501-refined unplaced-scaffold na na JJQL01000071.1 = NZ_JJQL01000071.1 Primary Assembly 4501 na scaffold102_1_size842-refined unplaced-scaffold na na JJQL01000072.1 = NZ_JJQL01000072.1 Primary Assembly 842 na scaffold25_1_size54361-refined unplaced-scaffold na na JJQL01000073.1 = NZ_JJQL01000073.1 Primary Assembly 54261 na scaffold48_1_size23060-refined unplaced-scaffold na na JJQL01000074.1 = NZ_JJQL01000074.1 Primary Assembly 23039 na scaffold16_1_size86664-refined unplaced-scaffold na na JJQL01000075.1 = NZ_JJQL01000075.1 Primary Assembly 86375 na scaffold10_1_size60301-refined unplaced-scaffold na na JJQL01000076.1 = NZ_JJQL01000076.1 Primary Assembly 60284 na scaffold60_1_size18287-refined unplaced-scaffold na na JJQL01000077.1 = NZ_JJQL01000077.1 Primary Assembly 18202 na scaffold39_1_size51264-refined unplaced-scaffold na na JJQL01000078.1 = NZ_JJQL01000078.1 Primary Assembly 51178 na scaffold1_1_size244324-refined unplaced-scaffold na na JJQL01000079.1 = NZ_JJQL01000079.1 Primary Assembly 243883 na scaffold3_1_size117356-refined unplaced-scaffold na na JJQL01000080.1 = NZ_JJQL01000080.1 Primary Assembly 117243 na scaffold94_1_size1935-refined unplaced-scaffold na na JJQL01000081.1 = NZ_JJQL01000081.1 Primary Assembly 1935 na scaffold93_1_size3097-refined unplaced-scaffold na na JJQL01000082.1 = NZ_JJQL01000082.1 Primary Assembly 3005 na scaffold86_1_size3893-refined unplaced-scaffold na na JJQL01000083.1 = NZ_JJQL01000083.1 Primary Assembly 3893 na scaffold65_1_size13361-refined unplaced-scaffold na na JJQL01000084.1 = NZ_JJQL01000084.1 Primary Assembly 13361 na scaffold84_1_size7658-refined unplaced-scaffold na na JJQL01000085.1 = NZ_JJQL01000085.1 Primary Assembly 7275 na scaffold71_1_size18475-refined unplaced-scaffold na na JJQL01000086.1 = NZ_JJQL01000086.1 Primary Assembly 18402 na scaffold74_1_size11418-refined unplaced-scaffold na na JJQL01000087.1 = NZ_JJQL01000087.1 Primary Assembly 11418 na scaffold26_1_size92283-refined unplaced-scaffold na na JJQL01000088.1 = NZ_JJQL01000088.1 Primary Assembly 92137 na scaffold22_1_size124700-refined unplaced-scaffold na na JJQL01000089.1 = NZ_JJQL01000089.1 Primary Assembly 124469 na scaffold17_1_size51188-refined unplaced-scaffold na na JJQL01000090.1 = NZ_JJQL01000090.1 Primary Assembly 51091 na scaffold43_1_size55656-refined unplaced-scaffold na na JJQL01000091.1 = NZ_JJQL01000091.1 Primary Assembly 55560 na scaffold88_1_size3081-refined unplaced-scaffold na na JJQL01000092.1 = NZ_JJQL01000092.1 Primary Assembly 3049 na scaffold21_1_size44315-refined unplaced-scaffold na na JJQL01000093.1 = NZ_JJQL01000093.1 Primary Assembly 44215 na scaffold56_1_size24782-refined unplaced-scaffold na na JJQL01000094.1 = NZ_JJQL01000094.1 Primary Assembly 24682 na scaffold9_1_size107896-refined unplaced-scaffold na na JJQL01000095.1 = NZ_JJQL01000095.1 Primary Assembly 107701 na scaffold52_1_size27561-refined unplaced-scaffold na na JJQL01000096.1 = NZ_JJQL01000096.1 Primary Assembly 27548 na scaffold40_1_size38510-refined unplaced-scaffold na na JJQL01000097.1 = NZ_JJQL01000097.1 Primary Assembly 38393 na scaffold55_1_size31395-refined unplaced-scaffold na na JJQL01000098.1 = NZ_JJQL01000098.1 Primary Assembly 31345 na scaffold85_1_size4019-refined unplaced-scaffold na na JJQL01000099.1 = NZ_JJQL01000099.1 Primary Assembly 4019 na scaffold100_1_size1309-refined unplaced-scaffold na na JJQL01000100.1 = NZ_JJQL01000100.1 Primary Assembly 1309 na scaffold59_1_size18249-refined unplaced-scaffold na na JJQL01000101.1 = NZ_JJQL01000101.1 Primary Assembly 18149 na scaffold75_1_size8074-refined unplaced-scaffold na na JJQL01000102.1 = NZ_JJQL01000102.1 Primary Assembly 8074 na scaffold44_1_size26793-refined unplaced-scaffold na na JJQL01000103.1 = NZ_JJQL01000103.1 Primary Assembly 26793 na