# Assembly name: ASM174708v1 # Organism name: Flavivirga aquatica (CFB group bacteria) # Infraspecific name: strain=SK-16 # Taxid: 1849968 # BioSample: SAMN05001254 # BioProject: PRJNA321646 # Submitter: The University of Tokyo # Date: 2016-09-28 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: MDJD01 # Assembly method: Platanus v. 1.2.4 # Expected final version: yes # Genome coverage: 57.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001747085.1 # RefSeq assembly accession: GCF_001747085.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001747115.1 GCF_001747115.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold100_cov119_read183 unplaced-scaffold na na MDJD01000001.1 = NZ_MDJD01000001.1 Primary Assembly 673 na scaffold101_cov159_read183 unplaced-scaffold na na MDJD01000002.1 = NZ_MDJD01000002.1 Primary Assembly 476 na scaffold103_cov114_read183 unplaced-scaffold na na MDJD01000003.1 = NZ_MDJD01000003.1 Primary Assembly 427 na scaffold104_cov137_read183 unplaced-scaffold na na MDJD01000004.1 = NZ_MDJD01000004.1 Primary Assembly 449 na scaffold106_cov268_read183 unplaced-scaffold na na MDJD01000005.1 = NZ_MDJD01000005.1 Primary Assembly 491 na scaffold11_cov60_read183 unplaced-scaffold na na MDJD01000006.1 = NZ_MDJD01000006.1 Primary Assembly 166626 na scaffold12_cov60_read183 unplaced-scaffold na na MDJD01000007.1 = NZ_MDJD01000007.1 Primary Assembly 795548 na scaffold13_cov60_read183 unplaced-scaffold na na MDJD01000008.1 = NZ_MDJD01000008.1 Primary Assembly 675 na scaffold14_cov28_read183 unplaced-scaffold na na MDJD01000009.1 = NZ_MDJD01000009.1 Primary Assembly 850 na scaffold15_cov38_read183 unplaced-scaffold na na MDJD01000010.1 = NZ_MDJD01000010.1 Primary Assembly 750 na scaffold16_cov46_read183 unplaced-scaffold na na MDJD01000011.1 = NZ_MDJD01000011.1 Primary Assembly 571 na scaffold20_cov67_read183 unplaced-scaffold na na MDJD01000012.1 = NZ_MDJD01000012.1 Primary Assembly 394 na scaffold21_cov60_read183 unplaced-scaffold na na MDJD01000013.1 = NZ_MDJD01000013.1 Primary Assembly 551 na scaffold23_cov53_read183 unplaced-scaffold na na MDJD01000014.1 = NZ_MDJD01000014.1 Primary Assembly 242625 na scaffold25_cov54_read183 unplaced-scaffold na na MDJD01000015.1 = NZ_MDJD01000015.1 Primary Assembly 385 na scaffold28_cov54_read183 unplaced-scaffold na na MDJD01000016.1 = NZ_MDJD01000016.1 Primary Assembly 1929 na scaffold30_cov60_read183 unplaced-scaffold na na MDJD01000017.1 = NZ_MDJD01000017.1 Primary Assembly 842 na scaffold32_cov60_read183 unplaced-scaffold na na MDJD01000018.1 = NZ_MDJD01000018.1 Primary Assembly 881 na scaffold36_cov54_read183 unplaced-scaffold na na MDJD01000019.1 = NZ_MDJD01000019.1 Primary Assembly 450 na scaffold38_cov53_read183 unplaced-scaffold na na MDJD01000020.1 = NZ_MDJD01000020.1 Primary Assembly 464 na scaffold39_cov54_read183 unplaced-scaffold na na MDJD01000021.1 = NZ_MDJD01000021.1 Primary Assembly 6912 na scaffold40_cov56_read183 unplaced-scaffold na na MDJD01000022.1 = NZ_MDJD01000022.1 Primary Assembly 439 na scaffold45_cov59_read183 unplaced-scaffold na na MDJD01000023.1 = NZ_MDJD01000023.1 Primary Assembly 329 na scaffold47_cov50_read183 unplaced-scaffold na na MDJD01000024.1 = NZ_MDJD01000024.1 Primary Assembly 338 na scaffold48_cov69_read183 unplaced-scaffold na na MDJD01000025.1 = NZ_MDJD01000025.1 Primary Assembly 428 na scaffold54_cov112_read183 unplaced-scaffold na na MDJD01000026.1 = NZ_MDJD01000026.1 Primary Assembly 403 na scaffold55_cov35_read183 unplaced-scaffold na na MDJD01000027.1 = NZ_MDJD01000027.1 Primary Assembly 400 na scaffold5_cov53_read183 unplaced-scaffold na na MDJD01000028.1 = NZ_MDJD01000028.1 Primary Assembly 262934 na scaffold61_cov53_read183 unplaced-scaffold na na MDJD01000029.1 = NZ_MDJD01000029.1 Primary Assembly 400 na scaffold64_cov54_read183 unplaced-scaffold na na MDJD01000030.1 = NZ_MDJD01000030.1 Primary Assembly 307 na scaffold65_cov63_read183 unplaced-scaffold na na MDJD01000031.1 = NZ_MDJD01000031.1 Primary Assembly 424 na scaffold66_cov60_read183 unplaced-scaffold na na MDJD01000032.1 = NZ_MDJD01000032.1 Primary Assembly 424 na scaffold69_cov59_read183 unplaced-scaffold na na MDJD01000033.1 = NZ_MDJD01000033.1 Primary Assembly 336 na scaffold6_cov55_read183 unplaced-scaffold na na MDJD01000034.1 = NZ_MDJD01000034.1 Primary Assembly 766242 na scaffold74_cov54_read183 unplaced-scaffold na na MDJD01000035.1 = NZ_MDJD01000035.1 Primary Assembly 519 na scaffold76_cov53_read183 unplaced-scaffold na na MDJD01000036.1 = NZ_MDJD01000036.1 Primary Assembly 530 na scaffold7_cov59_read183 unplaced-scaffold na na MDJD01000037.1 = NZ_MDJD01000037.1 Primary Assembly 992 na scaffold81_cov96_read183 unplaced-scaffold na na MDJD01000038.1 = NZ_MDJD01000038.1 Primary Assembly 317 na scaffold83_cov55_read183 unplaced-scaffold na na MDJD01000039.1 = NZ_MDJD01000039.1 Primary Assembly 758 na scaffold84_cov54_read183 unplaced-scaffold na na MDJD01000040.1 = NZ_MDJD01000040.1 Primary Assembly 1269 na scaffold85_cov53_read183 unplaced-scaffold na na MDJD01000041.1 = NZ_MDJD01000041.1 Primary Assembly 2647 na scaffold86_cov49_read183 unplaced-scaffold na na MDJD01000042.1 = NZ_MDJD01000042.1 Primary Assembly 2706 na scaffold87_cov59_read183 unplaced-scaffold na na MDJD01000043.1 = NZ_MDJD01000043.1 Primary Assembly 426075 na scaffold88_cov53_read183 unplaced-scaffold na na MDJD01000044.1 = NZ_MDJD01000044.1 Primary Assembly 45628 na scaffold89_cov53_read183 unplaced-scaffold na na MDJD01000045.1 = NZ_MDJD01000045.1 Primary Assembly 13289 na scaffold90_cov55_read183 unplaced-scaffold na na MDJD01000046.1 = NZ_MDJD01000046.1 Primary Assembly 90498 na scaffold91_cov55_read183 unplaced-scaffold na na MDJD01000047.1 = NZ_MDJD01000047.1 Primary Assembly 141231 na scaffold92_cov56_read183 unplaced-scaffold na na MDJD01000048.1 = NZ_MDJD01000048.1 Primary Assembly 178375 na scaffold93_cov60_read183 unplaced-scaffold na na MDJD01000049.1 = NZ_MDJD01000049.1 Primary Assembly 186856 na scaffold94_cov54_read183 unplaced-scaffold na na MDJD01000050.1 = NZ_MDJD01000050.1 Primary Assembly 50106 na scaffold96_cov118_read183 unplaced-scaffold na na MDJD01000051.1 = NZ_MDJD01000051.1 Primary Assembly 414 na scaffold98_cov143_read183 unplaced-scaffold na na MDJD01000052.1 = NZ_MDJD01000052.1 Primary Assembly 359 na scaffold99_cov177_read183 unplaced-scaffold na na MDJD01000053.1 = NZ_MDJD01000053.1 Primary Assembly 425 na scaffold9_cov54_read183 unplaced-scaffold na na MDJD01000054.1 = NZ_MDJD01000054.1 Primary Assembly 1241003 na