# Assembly name: ASM338298v1 # Organism name: Haloferax sp. Atlit-19N (euryarchaeotes) # Infraspecific name: strain=Atlit-19N # Taxid: 2077201 # BioSample: SAMN08382979 # BioProject: PRJNA431124 # Submitter: Tel Aviv University # Date: 2018-08-13 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PSYU01 # Assembly method: SPAdes v. 3.7.0 # Expected final version: yes # Genome coverage: 53x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_003382985.1 # RefSeq assembly accession: GCF_003382985.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003382995.1 GCF_003382995.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name P_contig000001 unplaced-scaffold na na PSYU01000001.1 = NZ_PSYU01000001.1 Primary Assembly 1194168 na P_contig000002 unplaced-scaffold na na PSYU01000002.1 = NZ_PSYU01000002.1 Primary Assembly 795446 na P_contig000003 unplaced-scaffold na na PSYU01000003.1 = NZ_PSYU01000003.1 Primary Assembly 604493 na P_contig000004 unplaced-scaffold na na PSYU01000004.1 = NZ_PSYU01000004.1 Primary Assembly 408218 na P_contig000005 unplaced-scaffold na na PSYU01000005.1 = NZ_PSYU01000005.1 Primary Assembly 315954 na P_contig000006 unplaced-scaffold na na PSYU01000006.1 = NZ_PSYU01000006.1 Primary Assembly 254253 na P_contig000007 unplaced-scaffold na na PSYU01000007.1 = NZ_PSYU01000007.1 Primary Assembly 198170 na P_contig000008 unplaced-scaffold na na PSYU01000008.1 = NZ_PSYU01000008.1 Primary Assembly 130278 na P_contig000009 unplaced-scaffold na na PSYU01000009.1 = NZ_PSYU01000009.1 Primary Assembly 6520 na P_contig000010 unplaced-scaffold na na PSYU01000010.1 = NZ_PSYU01000010.1 Primary Assembly 5549 na P_contig000012 unplaced-scaffold na na PSYU01000011.1 = NZ_PSYU01000011.1 Primary Assembly 4704 na P_contig000013 unplaced-scaffold na na PSYU01000012.1 = NZ_PSYU01000012.1 Primary Assembly 4050 na P_contig000014 unplaced-scaffold na na PSYU01000013.1 = NZ_PSYU01000013.1 Primary Assembly 3607 na P_contig000015 unplaced-scaffold na na PSYU01000014.1 = NZ_PSYU01000014.1 Primary Assembly 2531 na P_contig000016 unplaced-scaffold na na PSYU01000015.1 = NZ_PSYU01000015.1 Primary Assembly 2145 na P_contig000017 unplaced-scaffold na na PSYU01000016.1 = NZ_PSYU01000016.1 Primary Assembly 1660 na P_contig000018 unplaced-scaffold na na PSYU01000017.1 = NZ_PSYU01000017.1 Primary Assembly 1652 na P_contig000019 unplaced-scaffold na na PSYU01000018.1 = NZ_PSYU01000018.1 Primary Assembly 1568 na P_contig000020 unplaced-scaffold na na PSYU01000019.1 = NZ_PSYU01000019.1 Primary Assembly 1314 na P_contig000021 unplaced-scaffold na na PSYU01000020.1 = NZ_PSYU01000020.1 Primary Assembly 1306 na P_contig000022 unplaced-scaffold na na PSYU01000021.1 = NZ_PSYU01000021.1 Primary Assembly 1271 na P_contig000023 unplaced-scaffold na na PSYU01000022.1 = NZ_PSYU01000022.1 Primary Assembly 1200 na P_contig000024 unplaced-scaffold na na PSYU01000023.1 = NZ_PSYU01000023.1 Primary Assembly 1200 na P_contig000026 unplaced-scaffold na na PSYU01000024.1 = NZ_PSYU01000024.1 Primary Assembly 563 na P_contig000027 unplaced-scaffold na na PSYU01000025.1 = NZ_PSYU01000025.1 Primary Assembly 1054 na P_contig000030 unplaced-scaffold na na PSYU01000026.1 = NZ_PSYU01000026.1 Primary Assembly 975 na P_contig000033 unplaced-scaffold na na PSYU01000027.1 = NZ_PSYU01000027.1 Primary Assembly 942 na P_contig000034 unplaced-scaffold na na PSYU01000028.1 = NZ_PSYU01000028.1 Primary Assembly 940 na P_contig000038 unplaced-scaffold na na PSYU01000029.1 = NZ_PSYU01000029.1 Primary Assembly 905 na P_contig000039 unplaced-scaffold na na PSYU01000030.1 = NZ_PSYU01000030.1 Primary Assembly 905 na P_contig000043 unplaced-scaffold na na PSYU01000031.1 = NZ_PSYU01000031.1 Primary Assembly 861 na P_contig000046 unplaced-scaffold na na PSYU01000032.1 = NZ_PSYU01000032.1 Primary Assembly 845 na P_contig000049 unplaced-scaffold na na PSYU01000033.1 = NZ_PSYU01000033.1 Primary Assembly 820 na P_contig000050 unplaced-scaffold na na PSYU01000034.1 = NZ_PSYU01000034.1 Primary Assembly 815 na P_contig000055 unplaced-scaffold na na PSYU01000035.1 = NZ_PSYU01000035.1 Primary Assembly 751 na P_contig000060 unplaced-scaffold na na PSYU01000036.1 = NZ_PSYU01000036.1 Primary Assembly 784 na P_contig000065 unplaced-scaffold na na PSYU01000037.1 = NZ_PSYU01000037.1 Primary Assembly 749 na P_contig000070 unplaced-scaffold na na PSYU01000038.1 = NZ_PSYU01000038.1 Primary Assembly 737 na P_contig000073 unplaced-scaffold na na PSYU01000039.1 = NZ_PSYU01000039.1 Primary Assembly 725 na P_contig000077 unplaced-scaffold na na PSYU01000040.1 = NZ_PSYU01000040.1 Primary Assembly 718 na P_contig000080 unplaced-scaffold na na PSYU01000041.1 = NZ_PSYU01000041.1 Primary Assembly 709 na P_contig000081 unplaced-scaffold na na PSYU01000042.1 = NZ_PSYU01000042.1 Primary Assembly 703 na P_contig000084 unplaced-scaffold na na PSYU01000043.1 = NZ_PSYU01000043.1 Primary Assembly 699 na P_contig000085 unplaced-scaffold na na PSYU01000044.1 = NZ_PSYU01000044.1 Primary Assembly 697 na P_contig000086 unplaced-scaffold na na PSYU01000045.1 = NZ_PSYU01000045.1 Primary Assembly 695 na P_contig000088 unplaced-scaffold na na PSYU01000046.1 = NZ_PSYU01000046.1 Primary Assembly 692 na P_contig000089 unplaced-scaffold na na PSYU01000047.1 = NZ_PSYU01000047.1 Primary Assembly 691 na P_contig000090 unplaced-scaffold na na PSYU01000048.1 = NZ_PSYU01000048.1 Primary Assembly 689 na P_contig000095 unplaced-scaffold na na PSYU01000049.1 = NZ_PSYU01000049.1 Primary Assembly 673 na P_contig000102 unplaced-scaffold na na PSYU01000050.1 = NZ_PSYU01000050.1 Primary Assembly 662 na P_contig000103 unplaced-scaffold na na PSYU01000051.1 = NZ_PSYU01000051.1 Primary Assembly 655 na P_contig000105 unplaced-scaffold na na PSYU01000052.1 = NZ_PSYU01000052.1 Primary Assembly 649 na P_contig000108 unplaced-scaffold na na PSYU01000053.1 = NZ_PSYU01000053.1 Primary Assembly 647 na P_contig000110 unplaced-scaffold na na PSYU01000054.1 = NZ_PSYU01000054.1 Primary Assembly 643 na P_contig000112 unplaced-scaffold na na PSYU01000055.1 = NZ_PSYU01000055.1 Primary Assembly 641 na P_contig000113 unplaced-scaffold na na PSYU01000056.1 = NZ_PSYU01000056.1 Primary Assembly 639 na P_contig000119 unplaced-scaffold na na PSYU01000057.1 = NZ_PSYU01000057.1 Primary Assembly 629 na P_contig000121 unplaced-scaffold na na PSYU01000058.1 = NZ_PSYU01000058.1 Primary Assembly 627 na P_contig000123 unplaced-scaffold na na PSYU01000059.1 = NZ_PSYU01000059.1 Primary Assembly 621 na P_contig000132 unplaced-scaffold na na PSYU01000060.1 = NZ_PSYU01000060.1 Primary Assembly 610 na P_contig000138 unplaced-scaffold na na PSYU01000061.1 = NZ_PSYU01000061.1 Primary Assembly 595 na P_contig000140 unplaced-scaffold na na PSYU01000062.1 = NZ_PSYU01000062.1 Primary Assembly 594 na P_contig000142 unplaced-scaffold na na PSYU01000063.1 = NZ_PSYU01000063.1 Primary Assembly 593 na P_contig000147 unplaced-scaffold na na PSYU01000064.1 = NZ_PSYU01000064.1 Primary Assembly 580 na P_contig000148 unplaced-scaffold na na PSYU01000065.1 = NZ_PSYU01000065.1 Primary Assembly 580 na P_contig000157 unplaced-scaffold na na PSYU01000066.1 = NZ_PSYU01000066.1 Primary Assembly 563 na P_contig000161 unplaced-scaffold na na PSYU01000067.1 = NZ_PSYU01000067.1 Primary Assembly 557 na P_contig000164 unplaced-scaffold na na PSYU01000068.1 = NZ_PSYU01000068.1 Primary Assembly 554 na P_contig000169 unplaced-scaffold na na PSYU01000069.1 = NZ_PSYU01000069.1 Primary Assembly 552 na P_contig000170 unplaced-scaffold na na PSYU01000070.1 = NZ_PSYU01000070.1 Primary Assembly 551 na P_contig000171 unplaced-scaffold na na PSYU01000071.1 = NZ_PSYU01000071.1 Primary Assembly 550 na P_contig000173 unplaced-scaffold na na PSYU01000072.1 = NZ_PSYU01000072.1 Primary Assembly 548 na P_contig000175 unplaced-scaffold na na PSYU01000073.1 = NZ_PSYU01000073.1 Primary Assembly 547 na P_contig000178 unplaced-scaffold na na PSYU01000074.1 = NZ_PSYU01000074.1 Primary Assembly 542 na P_contig000185 unplaced-scaffold na na PSYU01000075.1 = NZ_PSYU01000075.1 Primary Assembly 536 na P_contig000190 unplaced-scaffold na na PSYU01000076.1 = NZ_PSYU01000076.1 Primary Assembly 532 na P_contig000201 unplaced-scaffold na na PSYU01000077.1 = NZ_PSYU01000077.1 Primary Assembly 526 na P_contig000203 unplaced-scaffold na na PSYU01000078.1 = NZ_PSYU01000078.1 Primary Assembly 524 na P_contig000204 unplaced-scaffold na na PSYU01000079.1 = NZ_PSYU01000079.1 Primary Assembly 523 na P_contig000210 unplaced-scaffold na na PSYU01000080.1 = NZ_PSYU01000080.1 Primary Assembly 520 na P_contig000225 unplaced-scaffold na na PSYU01000081.1 = NZ_PSYU01000081.1 Primary Assembly 511 na P_contig000226 unplaced-scaffold na na PSYU01000082.1 = NZ_PSYU01000082.1 Primary Assembly 511 na P_contig000228 unplaced-scaffold na na PSYU01000083.1 = NZ_PSYU01000083.1 Primary Assembly 510 na P_contig000234 unplaced-scaffold na na PSYU01000084.1 = NZ_PSYU01000084.1 Primary Assembly 507 na P_contig000236 unplaced-scaffold na na PSYU01000085.1 = NZ_PSYU01000085.1 Primary Assembly 506 na P_contig000243 unplaced-scaffold na na PSYU01000086.1 = NZ_PSYU01000086.1 Primary Assembly 504 na P_contig000245 unplaced-scaffold na na PSYU01000087.1 = NZ_PSYU01000087.1 Primary Assembly 502 na P_contig000250 unplaced-scaffold na na PSYU01000088.1 = NZ_PSYU01000088.1 Primary Assembly 500 na P_contig000252 unplaced-scaffold na na PSYU01000089.1 = NZ_PSYU01000089.1 Primary Assembly 498 na P_contig000254 unplaced-scaffold na na PSYU01000090.1 = NZ_PSYU01000090.1 Primary Assembly 496 na P_contig000260 unplaced-scaffold na na PSYU01000091.1 = NZ_PSYU01000091.1 Primary Assembly 493 na P_contig000262 unplaced-scaffold na na PSYU01000092.1 = NZ_PSYU01000092.1 Primary Assembly 493 na P_contig000265 unplaced-scaffold na na PSYU01000093.1 = NZ_PSYU01000093.1 Primary Assembly 492 na P_contig000267 unplaced-scaffold na na PSYU01000094.1 = NZ_PSYU01000094.1 Primary Assembly 491 na P_contig000275 unplaced-scaffold na na PSYU01000095.1 = NZ_PSYU01000095.1 Primary Assembly 486 na P_contig000279 unplaced-scaffold na na PSYU01000096.1 = NZ_PSYU01000096.1 Primary Assembly 485 na P_contig000285 unplaced-scaffold na na PSYU01000097.1 = NZ_PSYU01000097.1 Primary Assembly 484 na P_contig000286 unplaced-scaffold na na PSYU01000098.1 = NZ_PSYU01000098.1 Primary Assembly 482 na P_contig000287 unplaced-scaffold na na PSYU01000099.1 = NZ_PSYU01000099.1 Primary Assembly 482 na P_contig000289 unplaced-scaffold na na PSYU01000100.1 = NZ_PSYU01000100.1 Primary Assembly 481 na P_contig000297 unplaced-scaffold na na PSYU01000101.1 = NZ_PSYU01000101.1 Primary Assembly 479 na P_contig000301 unplaced-scaffold na na PSYU01000102.1 = NZ_PSYU01000102.1 Primary Assembly 478 na P_contig000306 unplaced-scaffold na na PSYU01000103.1 = NZ_PSYU01000103.1 Primary Assembly 476 na P_contig000307 unplaced-scaffold na na PSYU01000104.1 = NZ_PSYU01000104.1 Primary Assembly 476 na P_contig000313 unplaced-scaffold na na PSYU01000105.1 = NZ_PSYU01000105.1 Primary Assembly 474 na P_contig000315 unplaced-scaffold na na PSYU01000106.1 = NZ_PSYU01000106.1 Primary Assembly 473 na P_contig000319 unplaced-scaffold na na PSYU01000107.1 = NZ_PSYU01000107.1 Primary Assembly 472 na P_contig000320 unplaced-scaffold na na PSYU01000108.1 = NZ_PSYU01000108.1 Primary Assembly 472 na P_contig000321 unplaced-scaffold na na PSYU01000109.1 = NZ_PSYU01000109.1 Primary Assembly 471 na P_contig000322 unplaced-scaffold na na PSYU01000110.1 = NZ_PSYU01000110.1 Primary Assembly 470 na P_contig000323 unplaced-scaffold na na PSYU01000111.1 = NZ_PSYU01000111.1 Primary Assembly 470 na P_contig000324 unplaced-scaffold na na PSYU01000112.1 = NZ_PSYU01000112.1 Primary Assembly 470 na P_contig000325 unplaced-scaffold na na PSYU01000113.1 = NZ_PSYU01000113.1 Primary Assembly 469 na P_contig000327 unplaced-scaffold na na PSYU01000114.1 = NZ_PSYU01000114.1 Primary Assembly 468 na P_contig000329 unplaced-scaffold na na PSYU01000115.1 = NZ_PSYU01000115.1 Primary Assembly 467 na P_contig000334 unplaced-scaffold na na PSYU01000116.1 = NZ_PSYU01000116.1 Primary Assembly 466 na P_contig000335 unplaced-scaffold na na PSYU01000117.1 = NZ_PSYU01000117.1 Primary Assembly 466 na P_contig000337 unplaced-scaffold na na PSYU01000118.1 = NZ_PSYU01000118.1 Primary Assembly 466 na P_contig000340 unplaced-scaffold na na PSYU01000119.1 = NZ_PSYU01000119.1 Primary Assembly 465 na P_contig000341 unplaced-scaffold na na PSYU01000120.1 = NZ_PSYU01000120.1 Primary Assembly 465 na P_contig000343 unplaced-scaffold na na PSYU01000121.1 = NZ_PSYU01000121.1 Primary Assembly 462 na P_contig000345 unplaced-scaffold na na PSYU01000122.1 = NZ_PSYU01000122.1 Primary Assembly 462 na P_contig000346 unplaced-scaffold na na PSYU01000123.1 = NZ_PSYU01000123.1 Primary Assembly 462 na P_contig000347 unplaced-scaffold na na PSYU01000124.1 = NZ_PSYU01000124.1 Primary Assembly 461 na P_contig000349 unplaced-scaffold na na PSYU01000125.1 = NZ_PSYU01000125.1 Primary Assembly 461 na P_contig000350 unplaced-scaffold na na PSYU01000126.1 = NZ_PSYU01000126.1 Primary Assembly 461 na P_contig000354 unplaced-scaffold na na PSYU01000127.1 = NZ_PSYU01000127.1 Primary Assembly 460 na P_contig000357 unplaced-scaffold na na PSYU01000128.1 = NZ_PSYU01000128.1 Primary Assembly 458 na P_contig000358 unplaced-scaffold na na PSYU01000129.1 = NZ_PSYU01000129.1 Primary Assembly 458 na P_contig000360 unplaced-scaffold na na PSYU01000130.1 = NZ_PSYU01000130.1 Primary Assembly 458 na P_contig000364 unplaced-scaffold na na PSYU01000131.1 = NZ_PSYU01000131.1 Primary Assembly 456 na P_contig000365 unplaced-scaffold na na PSYU01000132.1 = NZ_PSYU01000132.1 Primary Assembly 456 na P_contig000366 unplaced-scaffold na na PSYU01000133.1 = NZ_PSYU01000133.1 Primary Assembly 455 na P_contig000376 unplaced-scaffold na na PSYU01000134.1 = NZ_PSYU01000134.1 Primary Assembly 451 na P_contig000378 unplaced-scaffold na na PSYU01000135.1 = NZ_PSYU01000135.1 Primary Assembly 451 na P_contig000382 unplaced-scaffold na na PSYU01000136.1 = NZ_PSYU01000136.1 Primary Assembly 451 na P_contig000388 unplaced-scaffold na na PSYU01000137.1 = NZ_PSYU01000137.1 Primary Assembly 449 na P_contig000391 unplaced-scaffold na na PSYU01000138.1 = NZ_PSYU01000138.1 Primary Assembly 448 na P_contig000392 unplaced-scaffold na na PSYU01000139.1 = NZ_PSYU01000139.1 Primary Assembly 448 na P_contig000395 unplaced-scaffold na na PSYU01000140.1 = NZ_PSYU01000140.1 Primary Assembly 447 na P_contig000396 unplaced-scaffold na na PSYU01000141.1 = NZ_PSYU01000141.1 Primary Assembly 445 na P_contig000400 unplaced-scaffold na na PSYU01000142.1 = NZ_PSYU01000142.1 Primary Assembly 443 na P_contig000402 unplaced-scaffold na na PSYU01000143.1 = NZ_PSYU01000143.1 Primary Assembly 442 na P_contig000405 unplaced-scaffold na na PSYU01000144.1 = NZ_PSYU01000144.1 Primary Assembly 440 na P_contig000408 unplaced-scaffold na na PSYU01000145.1 = NZ_PSYU01000145.1 Primary Assembly 439 na P_contig000409 unplaced-scaffold na na PSYU01000146.1 = NZ_PSYU01000146.1 Primary Assembly 439 na P_contig000410 unplaced-scaffold na na PSYU01000147.1 = NZ_PSYU01000147.1 Primary Assembly 439 na P_contig000411 unplaced-scaffold na na PSYU01000148.1 = NZ_PSYU01000148.1 Primary Assembly 439 na P_contig000412 unplaced-scaffold na na PSYU01000149.1 = NZ_PSYU01000149.1 Primary Assembly 439 na P_contig000413 unplaced-scaffold na na PSYU01000150.1 = NZ_PSYU01000150.1 Primary Assembly 438 na P_contig000414 unplaced-scaffold na na PSYU01000151.1 = NZ_PSYU01000151.1 Primary Assembly 438 na P_contig000417 unplaced-scaffold na na PSYU01000152.1 = NZ_PSYU01000152.1 Primary Assembly 437 na P_contig000419 unplaced-scaffold na na PSYU01000153.1 = NZ_PSYU01000153.1 Primary Assembly 437 na P_contig000420 unplaced-scaffold na na PSYU01000154.1 = NZ_PSYU01000154.1 Primary Assembly 437 na P_contig000422 unplaced-scaffold na na PSYU01000155.1 = NZ_PSYU01000155.1 Primary Assembly 436 na P_contig000427 unplaced-scaffold na na PSYU01000156.1 = NZ_PSYU01000156.1 Primary Assembly 435 na P_contig000428 unplaced-scaffold na na PSYU01000157.1 = NZ_PSYU01000157.1 Primary Assembly 435 na P_contig000431 unplaced-scaffold na na PSYU01000158.1 = NZ_PSYU01000158.1 Primary Assembly 434 na P_contig000436 unplaced-scaffold na na PSYU01000159.1 = NZ_PSYU01000159.1 Primary Assembly 432 na P_contig000438 unplaced-scaffold na na PSYU01000160.1 = NZ_PSYU01000160.1 Primary Assembly 432 na P_contig000444 unplaced-scaffold na na PSYU01000161.1 = NZ_PSYU01000161.1 Primary Assembly 431 na P_contig000445 unplaced-scaffold na na PSYU01000162.1 = NZ_PSYU01000162.1 Primary Assembly 430 na P_contig000448 unplaced-scaffold na na PSYU01000163.1 = NZ_PSYU01000163.1 Primary Assembly 430 na P_contig000449 unplaced-scaffold na na PSYU01000164.1 = NZ_PSYU01000164.1 Primary Assembly 430 na P_contig000454 unplaced-scaffold na na PSYU01000165.1 = NZ_PSYU01000165.1 Primary Assembly 415 na P_contig000455 unplaced-scaffold na na PSYU01000166.1 = NZ_PSYU01000166.1 Primary Assembly 392 na P_contig000456 unplaced-scaffold na na PSYU01000167.1 = NZ_PSYU01000167.1 Primary Assembly 241 na