# Assembly name: ASM3996215v1 # Organism name: Trichocoleus desertorum AS-A10 (cyanobacteria) # Infraspecific name: strain=AS-A10 # Taxid: 2933943 # BioSample: SAMN27398233 # BioProject: PRJNA824205 # Submitter: Institute of Hydrobiology # Date: 2024-05-30 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAMPKN01 # Assembly method: SPAdes v. v3.9.0 # Expected final version: yes # Genome coverage: 26.0662x # Sequencing technology: Illumina HiSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_039962155.1 # RefSeq assembly accession: GCF_039962155.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_039962165.1 GCF_039962165.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 unplaced-scaffold na na JAMPKN010000001.1 = NZ_JAMPKN010000001.1 Primary Assembly 818867 na scaffold_2 unplaced-scaffold na na JAMPKN010000002.1 = NZ_JAMPKN010000002.1 Primary Assembly 653551 na scaffold_3 unplaced-scaffold na na JAMPKN010000003.1 = NZ_JAMPKN010000003.1 Primary Assembly 387809 na scaffold_4 unplaced-scaffold na na JAMPKN010000004.1 = NZ_JAMPKN010000004.1 Primary Assembly 262219 na scaffold_5 unplaced-scaffold na na JAMPKN010000005.1 = NZ_JAMPKN010000005.1 Primary Assembly 254659 na scaffold_6 unplaced-scaffold na na JAMPKN010000006.1 = NZ_JAMPKN010000006.1 Primary Assembly 238368 na scaffold_7 unplaced-scaffold na na JAMPKN010000007.1 = NZ_JAMPKN010000007.1 Primary Assembly 237139 na scaffold_8 unplaced-scaffold na na JAMPKN010000008.1 = NZ_JAMPKN010000008.1 Primary Assembly 223202 na scaffold_9 unplaced-scaffold na na JAMPKN010000009.1 = NZ_JAMPKN010000009.1 Primary Assembly 208679 na scaffold_10 unplaced-scaffold na na JAMPKN010000010.1 = NZ_JAMPKN010000010.1 Primary Assembly 206463 na scaffold_11 unplaced-scaffold na na JAMPKN010000011.1 = NZ_JAMPKN010000011.1 Primary Assembly 191261 na scaffold_12 unplaced-scaffold na na JAMPKN010000012.1 = NZ_JAMPKN010000012.1 Primary Assembly 181035 na scaffold_13 unplaced-scaffold na na JAMPKN010000013.1 = NZ_JAMPKN010000013.1 Primary Assembly 173777 na scaffold_14 unplaced-scaffold na na JAMPKN010000014.1 = NZ_JAMPKN010000014.1 Primary Assembly 160409 na scaffold_15 unplaced-scaffold na na JAMPKN010000015.1 = NZ_JAMPKN010000015.1 Primary Assembly 121337 na scaffold_16 unplaced-scaffold na na JAMPKN010000016.1 = NZ_JAMPKN010000016.1 Primary Assembly 120407 na scaffold_17 unplaced-scaffold na na JAMPKN010000017.1 = NZ_JAMPKN010000017.1 Primary Assembly 110989 na scaffold_18 unplaced-scaffold na na JAMPKN010000018.1 = NZ_JAMPKN010000018.1 Primary Assembly 108804 na scaffold_19 unplaced-scaffold na na JAMPKN010000019.1 = NZ_JAMPKN010000019.1 Primary Assembly 89402 na scaffold_20 unplaced-scaffold na na JAMPKN010000020.1 = NZ_JAMPKN010000020.1 Primary Assembly 87929 na scaffold_21 unplaced-scaffold na na JAMPKN010000021.1 = NZ_JAMPKN010000021.1 Primary Assembly 72498 na scaffold_22 unplaced-scaffold na na JAMPKN010000022.1 = NZ_JAMPKN010000022.1 Primary Assembly 65589 na scaffold_23 unplaced-scaffold na na JAMPKN010000023.1 = NZ_JAMPKN010000023.1 Primary Assembly 64630 na scaffold_24 unplaced-scaffold na na JAMPKN010000024.1 = NZ_JAMPKN010000024.1 Primary Assembly 62285 na scaffold_25 unplaced-scaffold na na JAMPKN010000025.1 = NZ_JAMPKN010000025.1 Primary Assembly 57865 na scaffold_26 unplaced-scaffold na na JAMPKN010000026.1 = NZ_JAMPKN010000026.1 Primary Assembly 55799 na scaffold_27 unplaced-scaffold na na JAMPKN010000027.1 = NZ_JAMPKN010000027.1 Primary Assembly 52725 na scaffold_28 unplaced-scaffold na na JAMPKN010000028.1 = NZ_JAMPKN010000028.1 Primary Assembly 48366 na scaffold_29 unplaced-scaffold na na JAMPKN010000029.1 = NZ_JAMPKN010000029.1 Primary Assembly 47813 na scaffold_30 unplaced-scaffold na na JAMPKN010000030.1 = NZ_JAMPKN010000030.1 Primary Assembly 46127 na scaffold_31 unplaced-scaffold na na JAMPKN010000031.1 = NZ_JAMPKN010000031.1 Primary Assembly 39300 na scaffold_32 unplaced-scaffold na na JAMPKN010000032.1 = NZ_JAMPKN010000032.1 Primary Assembly 38813 na scaffold_33 unplaced-scaffold na na JAMPKN010000033.1 = NZ_JAMPKN010000033.1 Primary Assembly 37892 na scaffold_34 unplaced-scaffold na na JAMPKN010000034.1 = NZ_JAMPKN010000034.1 Primary Assembly 35527 na scaffold_35 unplaced-scaffold na na JAMPKN010000035.1 = NZ_JAMPKN010000035.1 Primary Assembly 35480 na scaffold_36 unplaced-scaffold na na JAMPKN010000036.1 = NZ_JAMPKN010000036.1 Primary Assembly 34883 na scaffold_37 unplaced-scaffold na na JAMPKN010000037.1 = NZ_JAMPKN010000037.1 Primary Assembly 34227 na scaffold_38 unplaced-scaffold na na JAMPKN010000038.1 = NZ_JAMPKN010000038.1 Primary Assembly 33854 na scaffold_39 unplaced-scaffold na na JAMPKN010000039.1 = NZ_JAMPKN010000039.1 Primary Assembly 32456 na scaffold_40 unplaced-scaffold na na JAMPKN010000040.1 = NZ_JAMPKN010000040.1 Primary Assembly 32205 na scaffold_41 unplaced-scaffold na na JAMPKN010000041.1 = NZ_JAMPKN010000041.1 Primary Assembly 31702 na scaffold_42 unplaced-scaffold na na JAMPKN010000042.1 = NZ_JAMPKN010000042.1 Primary Assembly 30120 na scaffold_43 unplaced-scaffold na na JAMPKN010000043.1 = NZ_JAMPKN010000043.1 Primary Assembly 29901 na scaffold_44 unplaced-scaffold na na JAMPKN010000044.1 = NZ_JAMPKN010000044.1 Primary Assembly 27577 na scaffold_45 unplaced-scaffold na na JAMPKN010000045.1 = NZ_JAMPKN010000045.1 Primary Assembly 27184 na scaffold_46 unplaced-scaffold na na JAMPKN010000046.1 = NZ_JAMPKN010000046.1 Primary Assembly 27043 na scaffold_47 unplaced-scaffold na na JAMPKN010000047.1 = NZ_JAMPKN010000047.1 Primary Assembly 26272 na scaffold_48 unplaced-scaffold na na JAMPKN010000048.1 = NZ_JAMPKN010000048.1 Primary Assembly 25899 na scaffold_49 unplaced-scaffold na na JAMPKN010000049.1 = NZ_JAMPKN010000049.1 Primary Assembly 25281 na scaffold_50 unplaced-scaffold na na JAMPKN010000050.1 = NZ_JAMPKN010000050.1 Primary Assembly 25160 na scaffold_51 unplaced-scaffold na na JAMPKN010000051.1 = NZ_JAMPKN010000051.1 Primary Assembly 24897 na scaffold_52 unplaced-scaffold na na JAMPKN010000052.1 = NZ_JAMPKN010000052.1 Primary Assembly 22629 na scaffold_53 unplaced-scaffold na na JAMPKN010000053.1 = NZ_JAMPKN010000053.1 Primary Assembly 21268 na scaffold_54 unplaced-scaffold na na JAMPKN010000054.1 = NZ_JAMPKN010000054.1 Primary Assembly 19539 na scaffold_55 unplaced-scaffold na na JAMPKN010000055.1 = NZ_JAMPKN010000055.1 Primary Assembly 17631 na scaffold_56 unplaced-scaffold na na JAMPKN010000056.1 = NZ_JAMPKN010000056.1 Primary Assembly 17594 na scaffold_57 unplaced-scaffold na na JAMPKN010000057.1 = NZ_JAMPKN010000057.1 Primary Assembly 17508 na scaffold_58 unplaced-scaffold na na JAMPKN010000058.1 = NZ_JAMPKN010000058.1 Primary Assembly 16760 na scaffold_59 unplaced-scaffold na na JAMPKN010000059.1 = NZ_JAMPKN010000059.1 Primary Assembly 16221 na scaffold_60 unplaced-scaffold na na JAMPKN010000060.1 = NZ_JAMPKN010000060.1 Primary Assembly 16096 na scaffold_61 unplaced-scaffold na na JAMPKN010000061.1 = NZ_JAMPKN010000061.1 Primary Assembly 15831 na scaffold_62 unplaced-scaffold na na JAMPKN010000062.1 = NZ_JAMPKN010000062.1 Primary Assembly 15600 na scaffold_63 unplaced-scaffold na na JAMPKN010000063.1 = NZ_JAMPKN010000063.1 Primary Assembly 15567 na scaffold_64 unplaced-scaffold na na JAMPKN010000064.1 = NZ_JAMPKN010000064.1 Primary Assembly 15344 na scaffold_65 unplaced-scaffold na na JAMPKN010000065.1 = NZ_JAMPKN010000065.1 Primary Assembly 15165 na scaffold_66 unplaced-scaffold na na JAMPKN010000066.1 = NZ_JAMPKN010000066.1 Primary Assembly 14881 na scaffold_67 unplaced-scaffold na na JAMPKN010000067.1 = NZ_JAMPKN010000067.1 Primary Assembly 14606 na scaffold_68 unplaced-scaffold na na JAMPKN010000068.1 = NZ_JAMPKN010000068.1 Primary Assembly 14351 na scaffold_69 unplaced-scaffold na na JAMPKN010000069.1 = NZ_JAMPKN010000069.1 Primary Assembly 13044 na scaffold_70 unplaced-scaffold na na JAMPKN010000070.1 = NZ_JAMPKN010000070.1 Primary Assembly 12450 na scaffold_71 unplaced-scaffold na na JAMPKN010000071.1 = NZ_JAMPKN010000071.1 Primary Assembly 12067 na scaffold_72 unplaced-scaffold na na JAMPKN010000072.1 = NZ_JAMPKN010000072.1 Primary Assembly 11974 na scaffold_73 unplaced-scaffold na na JAMPKN010000073.1 = NZ_JAMPKN010000073.1 Primary Assembly 11889 na scaffold_74 unplaced-scaffold na na JAMPKN010000074.1 = NZ_JAMPKN010000074.1 Primary Assembly 11785 na scaffold_75 unplaced-scaffold na na JAMPKN010000075.1 = NZ_JAMPKN010000075.1 Primary Assembly 11658 na scaffold_76 unplaced-scaffold na na JAMPKN010000076.1 = NZ_JAMPKN010000076.1 Primary Assembly 11655 na scaffold_77 unplaced-scaffold na na JAMPKN010000077.1 = NZ_JAMPKN010000077.1 Primary Assembly 11589 na scaffold_78 unplaced-scaffold na na JAMPKN010000078.1 = NZ_JAMPKN010000078.1 Primary Assembly 11449 na scaffold_79 unplaced-scaffold na na JAMPKN010000079.1 = NZ_JAMPKN010000079.1 Primary Assembly 11448 na scaffold_80 unplaced-scaffold na na JAMPKN010000080.1 = NZ_JAMPKN010000080.1 Primary Assembly 11280 na scaffold_81 unplaced-scaffold na na JAMPKN010000081.1 = NZ_JAMPKN010000081.1 Primary Assembly 11106 na scaffold_82 unplaced-scaffold na na JAMPKN010000082.1 = NZ_JAMPKN010000082.1 Primary Assembly 10902 na scaffold_83 unplaced-scaffold na na JAMPKN010000083.1 = NZ_JAMPKN010000083.1 Primary Assembly 10893 na scaffold_84 unplaced-scaffold na na JAMPKN010000084.1 = NZ_JAMPKN010000084.1 Primary Assembly 10867 na scaffold_85 unplaced-scaffold na na JAMPKN010000085.1 = NZ_JAMPKN010000085.1 Primary Assembly 10487 na scaffold_86 unplaced-scaffold na na JAMPKN010000086.1 = NZ_JAMPKN010000086.1 Primary Assembly 10306 na scaffold_87 unplaced-scaffold na na JAMPKN010000087.1 = NZ_JAMPKN010000087.1 Primary Assembly 10102 na scaffold_88 unplaced-scaffold na na JAMPKN010000088.1 = NZ_JAMPKN010000088.1 Primary Assembly 9812 na scaffold_89 unplaced-scaffold na na JAMPKN010000089.1 = NZ_JAMPKN010000089.1 Primary Assembly 9309 na scaffold_90 unplaced-scaffold na na JAMPKN010000090.1 = NZ_JAMPKN010000090.1 Primary Assembly 9240 na scaffold_91 unplaced-scaffold na na JAMPKN010000091.1 = NZ_JAMPKN010000091.1 Primary Assembly 9100 na scaffold_92 unplaced-scaffold na na JAMPKN010000092.1 = NZ_JAMPKN010000092.1 Primary Assembly 8607 na scaffold_93 unplaced-scaffold na na JAMPKN010000093.1 = NZ_JAMPKN010000093.1 Primary Assembly 8333 na scaffold_94 unplaced-scaffold na na JAMPKN010000094.1 = NZ_JAMPKN010000094.1 Primary Assembly 7604 na scaffold_95 unplaced-scaffold na na JAMPKN010000095.1 = NZ_JAMPKN010000095.1 Primary Assembly 7469 na scaffold_96 unplaced-scaffold na na JAMPKN010000096.1 = NZ_JAMPKN010000096.1 Primary Assembly 7219 na scaffold_97 unplaced-scaffold na na JAMPKN010000097.1 = NZ_JAMPKN010000097.1 Primary Assembly 6848 na scaffold_98 unplaced-scaffold na na JAMPKN010000098.1 = NZ_JAMPKN010000098.1 Primary Assembly 6812 na scaffold_99 unplaced-scaffold na na JAMPKN010000099.1 = NZ_JAMPKN010000099.1 Primary Assembly 6307 na scaffold_100 unplaced-scaffold na na JAMPKN010000100.1 = NZ_JAMPKN010000100.1 Primary Assembly 6124 na scaffold_101 unplaced-scaffold na na JAMPKN010000101.1 = NZ_JAMPKN010000101.1 Primary Assembly 6084 na scaffold_102 unplaced-scaffold na na JAMPKN010000102.1 = NZ_JAMPKN010000102.1 Primary Assembly 6008 na scaffold_103 unplaced-scaffold na na JAMPKN010000103.1 = NZ_JAMPKN010000103.1 Primary Assembly 5685 na scaffold_104 unplaced-scaffold na na JAMPKN010000104.1 = NZ_JAMPKN010000104.1 Primary Assembly 5426 na scaffold_105 unplaced-scaffold na na JAMPKN010000105.1 = NZ_JAMPKN010000105.1 Primary Assembly 5268 na scaffold_106 unplaced-scaffold na na JAMPKN010000106.1 = NZ_JAMPKN010000106.1 Primary Assembly 4867 na scaffold_107 unplaced-scaffold na na JAMPKN010000107.1 = NZ_JAMPKN010000107.1 Primary Assembly 4824 na scaffold_108 unplaced-scaffold na na JAMPKN010000108.1 = NZ_JAMPKN010000108.1 Primary Assembly 4692 na scaffold_109 unplaced-scaffold na na JAMPKN010000109.1 = NZ_JAMPKN010000109.1 Primary Assembly 4692 na scaffold_110 unplaced-scaffold na na JAMPKN010000110.1 = NZ_JAMPKN010000110.1 Primary Assembly 4682 na scaffold_111 unplaced-scaffold na na JAMPKN010000111.1 = NZ_JAMPKN010000111.1 Primary Assembly 4593 na scaffold_112 unplaced-scaffold na na JAMPKN010000112.1 = NZ_JAMPKN010000112.1 Primary Assembly 4276 na scaffold_113 unplaced-scaffold na na JAMPKN010000113.1 = NZ_JAMPKN010000113.1 Primary Assembly 4230 na scaffold_114 unplaced-scaffold na na JAMPKN010000114.1 = NZ_JAMPKN010000114.1 Primary Assembly 4188 na scaffold_115 unplaced-scaffold na na JAMPKN010000115.1 = NZ_JAMPKN010000115.1 Primary Assembly 4117 na scaffold_116 unplaced-scaffold na na JAMPKN010000116.1 = NZ_JAMPKN010000116.1 Primary Assembly 4070 na scaffold_117 unplaced-scaffold na na JAMPKN010000117.1 = NZ_JAMPKN010000117.1 Primary Assembly 3786 na scaffold_118 unplaced-scaffold na na JAMPKN010000118.1 = NZ_JAMPKN010000118.1 Primary Assembly 3443 na scaffold_119 unplaced-scaffold na na JAMPKN010000119.1 = NZ_JAMPKN010000119.1 Primary Assembly 3358 na scaffold_120 unplaced-scaffold na na JAMPKN010000120.1 = NZ_JAMPKN010000120.1 Primary Assembly 3347 na scaffold_121 unplaced-scaffold na na JAMPKN010000121.1 = NZ_JAMPKN010000121.1 Primary Assembly 3277 na scaffold_122 unplaced-scaffold na na JAMPKN010000122.1 = NZ_JAMPKN010000122.1 Primary Assembly 3199 na scaffold_123 unplaced-scaffold na na JAMPKN010000123.1 = NZ_JAMPKN010000123.1 Primary Assembly 3005 na scaffold_124 unplaced-scaffold na na JAMPKN010000124.1 = NZ_JAMPKN010000124.1 Primary Assembly 2804 na scaffold_125 unplaced-scaffold na na JAMPKN010000125.1 = NZ_JAMPKN010000125.1 Primary Assembly 2679 na scaffold_126 unplaced-scaffold na na JAMPKN010000126.1 = NZ_JAMPKN010000126.1 Primary Assembly 2656 na scaffold_127 unplaced-scaffold na na JAMPKN010000127.1 = NZ_JAMPKN010000127.1 Primary Assembly 2500 na scaffold_128 unplaced-scaffold na na JAMPKN010000128.1 = NZ_JAMPKN010000128.1 Primary Assembly 2312 na scaffold_129 unplaced-scaffold na na JAMPKN010000129.1 = NZ_JAMPKN010000129.1 Primary Assembly 2059 na scaffold_130 unplaced-scaffold na na JAMPKN010000130.1 = NZ_JAMPKN010000130.1 Primary Assembly 2020 na