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  Chromosome 20 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_011387 NT_025215 NT_028392 NT_011362 NT_030871 NT_011333


  NT_011362
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_011362AL450465346755723chr20NT_011362AL44570534722711300100100
S/G/Y/R/B/O NT_011362AL445705347227113chr20NT_011362AL3903743478054130000
S/G/Y/R/B/O NT_011362AL390374347805413chr20NT_011362AL0503183484627230000
S/G/Y/R/B/O NT_011362AL390374347805413  AC031984346755721502307852479262874
S/G/Y/R/B/O NT_011362AL050318348462723chr20NT_011362AL0316623499124030000
S/G/Y/R/B/O NT_011362AL050318348462723  AC026539346755721324139759446046632
S/G/Y/R/B/O NT_011362AL050318348462723  AC0319843467557215922518125384381193
S/G/Y/R/B/O NT_011362AL031662349912403chr20NT_011362AL13276835057881300101101
S/G/Y/R/B/O NT_011362AL031662349912403  AC026539346755721403114208542149940
S/G/Y/R/B/O NT_011362AL132768350578813chr20NT_011362AL3916023518160930000
S/G/Y/R/B/O NT_011362AL132768350578813  AC0265393505788111766916082033751
S/G/Y/R/B/O NT_011362AL391602351816093chr20NT_011362AL0793353519587730000
S/G/Y/R/B/O NT_011362AL079335351958773chr20NT_011362AL3655053526689430000
S/G/Y/R/B/O NT_011362AL365505352668943chr20NT_011362AL39111435368294300100100
S/G/Y/R/B/O NT_011362AL391114353682943chr20NT_011362AL13617235447417300100100
S/G/Y/R/B/O NT_011362AL136172354474173chr20NT_011362AL0316593551673030000
S/G/Y/R/B/O NT_011362AL031659355167303chr20NT_011362AL03442235617628300100100
S/G/Y/R/B/O NT_011362AL034422356176283chr20NT_011362AL3900143573120930000
S/G/Y/R/B/O NT_011362AL390014357312093chr20NT_011362AL1332933573455630000
S/G/Y/R/B/O NT_011362AL133293357345563chr20NT_011362AL13287335803118300100100
S/G/Y/R/B/O NT_011362AL132873358031183chr20NT_011362AL1096143581643130000
S/G/Y/R/B/O NT_011362AL109614358164313chr20NT_011362AL1622933601075630000
S/G/Y/R/B/O NT_011362AL162293360107563chr20NT_011362AL11849936050285300100100
S/G/Y/R/B/O NT_011362AL118499360502853chr20NT_011362AL023804361298723009696
S/G/Y/R/B/O NT_011362AL023804361298723chr20NT_011362AL10996436226236300100100
S/G/Y/R/B/O NT_011362AL109964362262363chr20NT_011362AL10982336321987300100100
S/G/Y/R/B/O NT_011362AL109823363219873chr20NT_011362AL0316513646056230000
S/G/Y/R/B/O NT_011362AL031651364605623chr20NT_011362AL3595553662740030000
S/G/Y/R/B/O NT_011362AL359555366274003chr20NT_011362AL5839623666906630000
S/G/Y/R/B/O NT_011362AL583962366690663chr20NT_011362AL4996253667505230000
S/G/Y/R/B/O NT_011362AL499625366750523chr20NT_011362AL3916923668786830000
S/G/Y/R/B/O NT_011362AL391692366878683chr20NT_011362AL0802493669799230000
S/G/Y/R/B/O NT_011362AL391692366878683  AL391095362262361102240010224
S/G/Y/R/B/O NT_011362AL080249366979923chr20NT_011362AL3916933679340030000
S/G/Y/R/B/O NT_011362AL080249366979923  AL391095362262361952510095251
S/G/Y/R/B/O NT_011362AL391693367934003chr20NT_011362AL0498683680091730000
S/G/Y/R/B/O NT_011362AL049868368009173chr20NT_011362AL03541936922739300100100
S/G/Y/R/B/O NT_011362AL049868368009173  AL391095369227391655340065534
S/G/Y/R/B/O NT_011362AL035419369227393chr20NT_011362AL13351937039431300100100
S/G/Y/R/B/O NT_011362AL133519370394313chr20NT_011362AL0316573713563030000
S/G/Y/R/B/O NT_011362AL133519370394313  AL109655369227391507490050749
S/G/Y/R/B/O NT_011362AL031657371356303chr20NT_011362AL12188937256160300100100
S/G/Y/R/B/O NT_011362AL031657371356303  AL109655369227391344380034438
S/G/Y/R/B/O NT_011362AL121889372561603chr20NT_011362AL02380337278832300100100
S/G/Y/R/B/O NT_011362AL023803372788323chr20NT_011362AL13699037434111300100100
S/G/Y/R/B/O NT_011362AL136990374341113chr20NT_011362AL03525137458758300100100
S/G/Y/R/B/O NT_011362AL035251374587583chr20NT_011362AL12158837620546300100100
S/G/Y/R/B/O NT_011362AL121588376205463chr20NT_011362AL03166137705317300100100
S/G/Y/R/B/O NT_011362AL031661377053173chr20NT_011362AL1096113786108430000
S/G/Y/R/B/O NT_011362AL109611378610843chr20NT_011362AL13298137961192300100100
S/G/Y/R/B/O NT_011362AL132981379611923chr20NT_011362AL1391633807327830000
S/G/Y/R/B/O NT_011362AL132981379611923  AC011677379611921721552885075040
S/G/Y/R/B/O NT_011362AL132981379611923  AC027571379611921859323280089212
S/G/Y/R/B/O NT_011362AL139163380732783chr20NT_011362AL1185233812138330000
S/G/Y/R/B/O NT_011362AL139163380732783  AC011677378610841284090028409
S/G/Y/R/B/O NT_011362AL139163380732783  AC027571378610841125060012506
S/G/Y/R/B/O NT_011362AL118523381213833chr20NT_011362AL1334193827649630000
S/G/Y/R/B/O NT_011362AL118523381213833  AC011677688908251355810035581
S/G/Y/R/B/O NT_011362AL118523381213833  AC027571688908251271330027133
S/G/Y/R/B/O NT_011362AL133419382764963chr20NT_011362AL00905038401453300100100
S/G/Y/R/B/O NT_011362AL009050384014533chr20NT_011362AL12182838526870300100100
S/G/Y/R/B/O NT_011362AL121828385268703chr20NT_011362AL03125638588691300100100
S/G/Y/R/B/O NT_011362AL031256385886913chr20NT_011362AL1185213870658530000
S/G/Y/R/B/O NT_011362AL118521387065853chr20NT_011362AL04969138728426300100100
S/G/Y/R/B/O NT_011362AL049691387284263chr20NT_011362AL03455238897569300100100
S/G/Y/R/B/O NT_011362AL034552388975693chr20NT_011362AL03566538953038300100100
S/G/Y/R/B/O NT_011362AL035665389530383chr20NT_011362AL03443139098531300100100
S/G/Y/R/B/O NT_011362AL034431390985313chr20NT_011362AL050317391813373009797
S/G/Y/R/B/O NT_011362AL050317391813373chr20NT_011362AL03166039323587300101101
S/G/Y/R/B/O NT_011362AL031660393235873chr20NT_011362AL0356523937332430000
S/G/Y/R/B/O NT_011362AL035652393733243chr20NT_011362AL0223943946205130000
S/G/Y/R/B/O NT_011362AL022394394620513chr20NT_011362AL03125739608498300100100
S/G/Y/R/B/O NT_011362AL031257396084983chr20NT_011362AL1326543968580030000
S/G/Y/R/B/O NT_011362AL132654396858003chr20NT_011362AL03166739714863300100100
S/G/Y/R/B/O NT_011362AL031667397148633chr20NT_011362AL1216743985728230000
S/G/Y/R/B/O NT_011362AL121674398572823chr20NT_011362AL03166939896261300100100
S/G/Y/R/B/O NT_011362AL031669398962613chr20NT_011362AL35481239990385300100100
S/G/Y/R/B/O NT_011362AL354812399903853chr20NT_011362AL13322940006375300100100
S/G/Y/R/B/O NT_011362AL133229400063753chr20NT_011362AL35998440168051300100100
S/G/Y/R/B/O NT_011362AL359984401680513chr20NT_011362AL03165440230060300100100
S/G/Y/R/B/O NT_011362AL031654402300603chr20NT_011362AL04981240336333300100100
S/G/Y/R/B/O NT_011362AL049812403363333chr20NT_011362AL02447340442179300100100
S/G/Y/R/B/O NT_011362AL024473404421793chr20NT_011362AL03545940549466300100100
S/G/Y/R/B/O NT_011362AL035459405494663chr20NT_011362Z9394240599714300100100
S/G/Y/R/B/O NT_011362Z93942405997143chr20NT_011362AL0222394074381530000
S/G/Y/R/B/O NT_011362AL022239407438153chr20NT_011362AL10982640877852300100100
S/G/Y/R/B/O NT_011362AL109826408778523chr20NT_011362AL0356664092870630000
S/G/Y/R/B/O NT_011362AL035666409287063chr20NT_011362AL0316564097594030000
S/G/Y/R/B/O NT_011362AL031656409759403chr20NT_011362AL13646141087481300100100
S/G/Y/R/B/O NT_011362AL136461410874813chr20NT_011362AL12176341136241300100100
S/G/Y/R/B/O NT_011362AL121763411362413chr20NT_011362AL0316764126012930000
S/G/Y/R/B/O NT_011362AL121763411362413  AC04491041136241111201625632887117466
S/G/Y/R/B/O NT_011362AL031676412601293chr20NT_011362AL117374413866643009898
S/G/Y/R/B/O NT_011362AL031676412601293  AC044910410874811602320267062902
S/G/Y/R/B/O NT_011362AL117374413866643chr20NT_011362AL35969541470566300100100
S/G/Y/R/B/O NT_011362AL359695414705663chr20NT_011362AL02139541527449300100100
S/G/Y/R/B/O NT_011362AL021395415274493chr20NT_011362AL13880641704911300104104
S/G/Y/R/B/O NT_011362AL138806417049113chr20NT_011362AL03168141710285300105105
S/G/Y/R/B/O NT_011362AL031681417102853chr20NT_011362Z987524187982930000
S/G/Y/R/B/O NT_011362Z98752418798293chr20NT_011362AL1218864196405230000
S/G/Y/R/B/O NT_011362Z98752418798293  AL627384417049111501702748052918
S/G/Y/R/B/O NT_011362AL121886419640523chr20NT_011362AL16194442100071300100100
S/G/Y/R/B/O NT_011362AL121886419640523  AL627384421000711885202808801799345
S/G/Y/R/B/O NT_011362AL161944421000713chr20NT_011362AL0350894211133930000
S/G/Y/R/B/O NT_011362AL035089421113393chr20NT_011362AL35379742285043300100100
S/G/Y/R/B/O NT_011362AL353797422850433chr20NT_011362AL12158742294981300100100
S/G/Y/R/B/O NT_011362AL121587422949813chr20NT_011362AL03441942368560300101101
S/G/Y/R/B/O NT_011362AL034419423685603chr20NT_011362AL03544742520668300102102
S/G/Y/R/B/O NT_011362AL035447425206683chr20NT_011362AL03546242574649300100100
S/G/Y/R/B/O NT_011362AL035462425746493chr20NT_011362AL11738242624883300101101
S/G/Y/R/B/O NT_011362AL117382426248833chr20NT_011362AL13277242756623300100100
S/G/Y/R/B/O NT_011362AL132772427566233chr20NT_011362Z970534284032130000
S/G/Y/R/B/O NT_011362Z97053428403213chr20NT_011362AL1393524298792930000
S/G/Y/R/B/O NT_011362Z97053428403213  M13792426248833120230012023
S/G/Y/R/B/O NT_011362AL139352429879293chr20NT_011362AL1185224309508930000
S/G/Y/R/B/O NT_011362AL139352429879293  M13792426248833247670024767
S/G/Y/R/B/O NT_011362AL118522430950893chr20NT_011362AL0087254320209830000
S/G/Y/R/B/O NT_011362AL118522430950893  AF294352426248833169300016930
S/G/Y/R/B/O NT_011362AL008725432020983chr20NT_011362AL10983943281225300159159
S/G/Y/R/B/O NT_011362AL109839432812253chr20NT_011362Z93016433906413342950034295
S/G/Y/R/B/O NT_011362Z93016433906413chr20NT_011362AL0497674348261330000
S/G/Y/R/B/O NT_011362AL049767434826133chr20NT_011362AL0356604358226030000
S/G/Y/R/B/O NT_011362AL049767434826133  Z47556432812253251570025157
S/G/Y/R/B/O NT_011362AL035660435822603chr20NT_011362AL02157843645956300100100
S/G/Y/R/B/O NT_011362AL021578436459563chr20NT_011362AL03166343793476300102102
S/G/Y/R/B/O NT_011362AL021578436459563  AF31405843645956314675200146752
S/G/Y/R/B/O NT_011362AL021578436459563  D79206435822603237600023760
S/G/Y/R/B/O NT_011362AL031663437934763chr20NT_011362AL12177843920401300100100
S/G/Y/R/B/O NT_011362AL031663437934763  AF314058435822603381210038121
S/G/Y/R/B/O NT_011362AL121778439204013chr20NT_011362AL0316714393789930000
S/G/Y/R/B/O NT_011362AL031671439378993chr20NT_011362AL10965644054179300100100
S/G/Y/R/B/O NT_011362AL031671439378993  AC02397143793476194661677133196669
S/G/Y/R/B/O NT_011362AL109656440541793chr20NT_011362AL0503484408753730000
S/G/Y/R/B/O NT_011362AL109656440541793  AC023971440541791323281933034261
S/G/Y/R/B/O NT_011362AL050348440875373chr20NT_011362AL0087264418482230000
S/G/Y/R/B/O NT_011362AL050348440875373  AC067737439378991529440897561919
S/G/Y/R/B/O NT_011362AL008726441848223chr20NT_011362AL1624584427080230000
S/G/Y/R/B/O NT_011362AL008726441848223  AC0677374393789911941410243717436831
S/G/Y/R/B/O NT_011362AL162458442708023chr20NT_011362AL03566244421493300100100
S/G/Y/R/B/O NT_011362AL162458442708023  AL13355444421493110628300106283
S/G/Y/R/B/O NT_011362AL035662444214933chr20NT_011362AL03168744516676300100100
S/G/Y/R/B/O NT_011362AL031687445166763chr20NT_011362AL44528644664391300100100
S/G/Y/R/B/O NT_011362AL445286446643913chr20NT_011362AL13322744675409300100100
S/G/Y/R/B/O NT_011362AL133227446754093chr20NT_011362AL03168644760875300100100
S/G/Y/R/B/O NT_011362AL031686447608753chr20NT_011362AL35474544855592300100100
S/G/Y/R/B/O NT_011362AL354745448555923chr20NT_011362AL0344244486902730000
S/G/Y/R/B/O NT_011362AL034424448690273chr20NT_011362AL1335204499666230000
S/G/Y/R/B/O NT_011362AL034424448690273  AC07361944760875111268700112687
S/G/Y/R/B/O NT_011362AL133520449966623chr20NT_011362AL0310554504388730000
S/G/Y/R/B/O NT_011362AL133520449966623  AC073619447608751298342984032818
S/G/Y/R/B/O NT_011362AL031055450438873chr20NT_011362AL3595064517120530000
S/G/Y/R/B/O NT_011362AL359506451712053chr20NT_011362AL3547664518095130000
S/G/Y/R/B/O NT_011362AL354766451809513chr20NT_011362AL12177645292021300100100
S/G/Y/R/B/O NT_011362AL121776452920213chr20NT_011362AL3594344543590230000
S/G/Y/R/B/O NT_011362AL359434454359023chr20NT_011362AL3902114548251030000
S/G/Y/R/B/O NT_011362AL390211454825103chr20NT_011362AL0495404551732730000
S/G/Y/R/B/O NT_011362AL049540455173273chr20NT_011362AL39021245591776300102102
S/G/Y/R/B/O NT_011362AL390212455917763chr20NT_011362AL0316664561015230000
S/G/Y/R/B/O NT_011362AL390212455917763  AL022342455917763184780018478
S/G/Y/R/B/O NT_011362AL031666456101523chr20NT_011362AL10982545726422300101101
S/G/Y/R/B/O NT_011362AL109825457264223chr20NT_011362AL35377745810161300100100
S/G/Y/R/B/O NT_011362AL353777458101613chr20NT_011362AL0213944587288630000
S/G/Y/R/B/O NT_011362AL021394458728863chr20NT_011362AL0344184594136130000
S/G/Y/R/B/O NT_011362AL034418459413613chr20NT_011362AL3548134602771430000
S/G/Y/R/B/O NT_011362AL034418459413613  AL354832457264221122970012297
S/G/Y/R/B/O NT_011362AL354813460277143chr20NT_011362AL1217774612077030000
S/G/Y/R/B/O NT_011362AL354813460277143  AL354832457264221825784918087496
S/G/Y/R/B/O NT_011362AL121777461207703chr20NT_011362Z953304625255830000
S/G/Y/R/B/O NT_011362AL121777461207703  AL354832457264221654970065497
S/G/Y/R/B/O NT_011362Z95330462525583chr20NT_011362AL3575584629638030000
S/G/Y/R/B/O NT_011362AL357558462963803chr20NT_011362AL13935146359507300100100
S/G/Y/R/B/O NT_011362AL139351463595073chr20NT_011362AL1361024645691930000
S/G/Y/R/B/O NT_011362AL136102464569193chr20NT_011362AL1333414653497930000
S/G/Y/R/B/O NT_011362AL136102464569193  AC02058546296380171443873439876714
S/G/Y/R/B/O NT_011362AL133341465349793chr20NT_011362AL1218884656991230000
S/G/Y/R/B/O NT_011362AL133341465349793  AC020585462963801346640034664
S/G/Y/R/B/O NT_011362AL121888465699123chr20NT_011362AL13707846706742300100100
S/G/Y/R/B/O NT_011362AL121888465699123  AC020585462963801785200078520
S/G/Y/R/B/O NT_011362AL137078467067423chr20NT_011362AL04954146787367300100100
S/G/Y/R/B/O NT_011362AL049541467873673chr20NT_011362AL44519246917141300100100
S/G/Y/R/B/O NT_011362AL445192469171413chr20NT_011362AL0351064699299530000
S/G/Y/R/B/O NT_011362AL035106469929953chr20NT_011362AL13334247123902300100100
S/G/Y/R/B/O NT_011362AL133342471239023chr20NT_011362AL04953747234616300100100
S/G/Y/R/B/O NT_011362AL049537472346163chr20NT_011362AL12190347344544300100100
S/G/Y/R/B/O NT_011362AL121903473445443chr20NT_011362AL1331744742504430000
S/G/Y/R/B/O NT_011362AL121903473445443  AF053645471239023124970012497
S/G/Y/R/B/O NT_011362AL133174474250443chr20NT_011362AL3575604753878030000
S/G/Y/R/B/O NT_011362AL133174474250443  AC0558794723461613799687131614762856
S/G/Y/R/B/O NT_011362AL357560475387803chr20NT_011362AL0497664756786630000
S/G/Y/R/B/O NT_011362AL357560475387803  AC055879472346161154153253689425562
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S/G/Y/R/B/O NT_011362AL121918586276853chr20NT_011362AL13614358741339300100100
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S/G/Y/R/B/O NT_011362AL139348591070263chr20NT_011362AL05032659175557300100100
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S/G/Y/R/B/O NT_011362AL121910592535123chr20NT_011362AL12188759395307300100100
S/G/Y/R/B/O NT_011362AL121887593953073chr20NT_011362AL36522959508680300100100
S/G/Y/R/B/O NT_011362AL365229595086803chr20NT_011362AL45046359630058300100100
S/G/Y/R/B/O NT_011362AL450463596300583